diff --git a/DREAMS/DREAMS.yaml b/DREAMS/DREAMS.yaml new file mode 100644 index 00000000..af48f8b5 --- /dev/null +++ b/DREAMS/DREAMS.yaml @@ -0,0 +1,54 @@ +object : instrument +alias : INST +name : DREAMS +description : + DREAMS is a 0.5m telescope operated + by the Department of Astrophyhics at the University of ANU. + +properties: + temperature: -40 # deg + pixel_scale : 2.48 # arcsec / pixel + plate_scale : 206.265 # arcsec / mm + +effects: +- name : seeing_psf + description : DREAMS PSF + class : SeeingPSF + kwargs : + # 5.00 arcseconds is too large for DREAMS, the actual value is + # more like 1.50 arcsec. Using 1.50 arcsec makes the sources hard + # to see. + fwhm : 5.00 # [arcsec] + +- name : skycalc_average_atmo + description : atmospheric properties for a default skycalc run + class : AtmosphericTERCurve + include : True + kwargs : + filename: "TER_atmosphere.dat" + rescale_emission: + filter_name: "!OBS.filter_name" + filename_format: "filters/{}.dat" + value: "!OBS.sky.bg_mag" + unit: mag + +- name: dreams_static_surfaces + description : telescope and camera optical surfaces + class: SurfaceList + kwargs: + filename: LIST_DREAMS_mirrors_static.dat + +- name: filter_curve + description : transmission curve for filter + class: FilterCurve + kwargs: + filter_name: "!OBS.filter_name" + filename_format: "filters/{}.dat" + minimum_throughput: !!float 1.01E-4 + outer: 0.05088 + outer_unit: "m" + +- name: fits_headers + description : FITS headers + class: ExtraFitsKeywords + include: True diff --git a/DREAMS/DREAMS_InGaAs.yaml b/DREAMS/DREAMS_InGaAs.yaml new file mode 100644 index 00000000..37218ac8 --- /dev/null +++ b/DREAMS/DREAMS_InGaAs.yaml @@ -0,0 +1,63 @@ +### Princeton DREAMS InGaAs DETECTOR +object : detector +alias : DET +name : DREAMS_InGaAs_detector +description : base configuration for Dreams camera + +properties: + image_plane_id : 0 + temperature : -60 + dit : "!OBS.dit" + ndit : "!OBS.ndit" + width: 1280 + height: 1024 + x: 0 + y: 0 + bin_size: 1 + +effects: +- name: full_detector_array + description: THe full DREAMS detector array list + class: DetectorList + include: True + kwargs: + filename : FPA_array_layout.dat + active_detectors : "all" + +- name: qe_curve + description : Quantum efficiency curves for each detector + class : QuantumEfficiencyCurve + kwargs : + filename : QE_InGaAs.dat + +- name: exposure_integration + description: Summing up sky signal for all DITs and NDITs + class: ExposureIntegration + +- name: dark_current + description : SBIG dark current + class: DarkCurrent + kwargs: + value: 67.00 + +- name: shot_noise + description : apply Poisson shot noise to images + class: ShotNoise + +- name: detector_linearity + class: LinearityCurve + kwargs: + incident: [0, 57143, 999999999999] + measured: [0, 57143, 57143] + +- name : readout_noise + description : Readout noise frames + class : BasicReadoutNoise + kwargs : + noise_std : 75 + +- name : detector_binning + description : Binning the detector frames + class : BinnedImage + kwargs : + bin_size : "!DET.bin_size" diff --git a/DREAMS/FPA_array_layout.dat b/DREAMS/FPA_array_layout.dat new file mode 100644 index 00000000..939908fc --- /dev/null +++ b/DREAMS/FPA_array_layout.dat @@ -0,0 +1,22 @@ +# name : DREAMS 1280SCICAM +# author : Anjali Shivani Reddy +# sources : 5240-0001 Scicam FPA Drawing mm v1.pdf +# date_created : 2024-05-04 +# x_cen_unit : mm +# y_cen_unit : mm +# x_size_unit : pix +# y_size_unit : pix +# pixel_size_unit : mm +# angle_unit : deg +# gain_unit : electron/adu +# +id x_cen y_cen x_size y_size pixel_size angle gain +1 -8.015 12.95 1280 1024 0.012 0.0 4.3 +2 8.015 12.95 1280 1024 0.012 0.0 4.3 +3 -8.015 0.000 1280 1024 0.012 0.0 4.3 +4 8.015 0.000 1280 1024 0.012 0.0 4.3 +5 -8.015 -12.95 1280 1024 0.012 0.0 4.3 +6 8.015 -12.95 1280 1024 0.012 0.0 4.3 + + + diff --git a/DREAMS/LIST_DREAMS_mirrors_static.dat b/DREAMS/LIST_DREAMS_mirrors_static.dat new file mode 100644 index 00000000..2374a591 --- /dev/null +++ b/DREAMS/LIST_DREAMS_mirrors_static.dat @@ -0,0 +1,10 @@ +# name : mirror_list +# outer_unit : m +# inner_unit : m +# angle_unit : degree +# temperature_unit : deg_C +# description : A list of optical surfaces in the telescope and camera. M[1-2] are the telescope mirrors. +# +name outer inner angle temperature action filename +M1 0.5 0.0 0 -40 reflection TER_mirror.dat +M2 0.5 0.0 0 -40 reflection TER_mirror.dat \ No newline at end of file diff --git a/DREAMS/QE_InGaAs.dat b/DREAMS/QE_InGaAs.dat new file mode 100644 index 00000000..e1439d8c --- /dev/null +++ b/DREAMS/QE_InGaAs.dat @@ -0,0 +1,2111 @@ +# action : transmission +# wavelength_unit : um +# +wavelength transmission +0.8 0.0 +0.8010318882867862 0.47089420439103236 +0.8014842434347645 0.48637536025609485 +0.8019365985827428 0.4782511781493827 +0.8023889537307212 0.4820753360496684 +0.8028413088786994 0.4801019014406843 +0.8032936640266778 0.4951879706049592 +0.8037460191746562 0.4854655975193126 +0.8041983743226344 0.4779761523419514 +0.8046507294706128 0.48708141997460186 +0.805103084618591 0.4954502240424059 +0.8055554397665694 0.4903882986383811 +0.8060077949145478 0.4798940500624708 +0.806460150062526 0.4914403608191411 +0.8069125052105044 0.4919116092563264 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0.0 +1.7509776990412675 0.0 +1.7514300541892456 0.0 +1.751882409337224 0.0 +1.7523347644852023 0.0 +1.7527871196331806 0.0 +1.753239474781159 0.0 diff --git a/DREAMS/README.md b/DREAMS/README.md new file mode 100644 index 00000000..dc1da135 --- /dev/null +++ b/DREAMS/README.md @@ -0,0 +1,5 @@ +# DREAMS Telescope in a nutshell: + +The Dynamic REd All-Sky Monitoring Survey (DREAMS) is a cutting-edge 0.5-meter infrared telescope strategically situated at the Siding Spring Observatory, part of the Australian National University. DREAMS is pioneering in its application of Indium Gallium Arsenide (InGaAs) detectors, which, despite having a higher noise profile, offer a cost-effective alternative to the traditionally used mercury-cadmium-telluride (HgCdTe) detectors in infrared astronomy. The telescope is equipped with the advanced Princeton Infrared Technologies 1280SCICAM, enabling high-sensitivity observations across the near-infrared spectrum. + +DREAMS is designed to push the boundaries of wide-field time-domain astronomy in parallel with other surveys such as Palomar Gattini-IR and WINTER. As a southern sky near-infrared time-domain survey, DREAMS is uniquely positioned to contribute to a range of astrophysical phenomena significantly. These include detecting and characterising Fast Radio Bursts (FRBs), studying variable stars such as RR Lyrae, and advancing multi-messenger astronomy by providing crucial infrared observations that complement data from other wavelengths and messengers. diff --git a/DREAMS/TER_atmosphere.dat b/DREAMS/TER_atmosphere.dat new file mode 100644 index 00000000..a471871f --- /dev/null +++ b/DREAMS/TER_atmosphere.dat @@ -0,0 +1,359 @@ +# date_created : 2023-03-21 +# location : Sidling spring +# wavelength_unit : nm +# emission_unit : ph s-1 m-2 um-1 arcsec-2 +# action : transmission +# Details : http://www.gemini.edu/sciops/ObsProcess/obsConstraints/atm-models/trans_30_10.dat +# +wavelength transmission emission +1161.0 0.924793 0.1 +1161.5 0.939469 0.1 +1162.0 0.935235 0.1 +1162.5 0.940330 0.1 +1163.0 0.967153 0.1 +1163.5 0.963672 0.1 +1164.0 0.962931 0.1 +1164.5 0.968273 0.1 +1165.0 0.949592 0.1 +1165.5 0.934222 0.1 +1166.0 0.940428 0.1 +1166.5 0.953383 0.1 +1167.0 0.959292 0.1 +1167.5 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0.1 +1335.0 0.904685 0.1 + + diff --git a/DREAMS/TER_mirror.dat b/DREAMS/TER_mirror.dat new file mode 100644 index 00000000..bd8459df --- /dev/null +++ b/DREAMS/TER_mirror.dat @@ -0,0 +1,22 @@ +# author : Anjali Shivani Reddy +# Assumption: Assuming that telescope has reflectivity of 85% +# date_created : 2024-04-02 +# status : Dreams mirrors +# type : mirror:reflection +# wavelength_unit : um +# +wavelength reflection +0.4 0.85 +0.5 0.85 +0.6 0.85 +0.7 0.85 +0.8 0.85 +0.9 0.85 +1.0 0.85 +1.1 0.85 +1.2 0.85 +1.3 0.85 +1.4 0.85 +1.5 0.85 +1.6 0.85 +1.7 0.85 \ No newline at end of file diff --git a/DREAMS/Test_codes/Galaxy.py b/DREAMS/Test_codes/Galaxy.py new file mode 100644 index 00000000..7287ea2f --- /dev/null +++ b/DREAMS/Test_codes/Galaxy.py @@ -0,0 +1,67 @@ +# Extragalatic +import os +import pytest +import numpy as np +from astropy.io.fits import HDUList +from matplotlib import pyplot as plt +from matplotlib.colors import LogNorm +import scopesim +import synphot +from scopesim import Source +from astropy.io import fits +from scopesim_templates.extragalactic import galaxy +from scopesim import rc +from scopesim.source.source_templates import star_field +import scopesim_templates as sim_tp +from scopesim.optics.fov_manager import FOVManager + +PLOTS = True + +if rc.__config__["!SIM.tests.run_integration_tests"] is False: + pytestmark = pytest.mark.skip("Ignoring DREAMS integration tests") + +cmds = scopesim.UserCommands(use_instrument="DREAMS") +cmds["!OBS.dit"] = 1000 +cmds["!OBS.ndit"] = 1000 +cmds["!DET.bin_size"] = 1 +cmds["!OBS.sky.bg_mag"] = 14.9 +cmds["!OBS.sky.filter_name"] = "J" +cmds["SIM.sub_pixel.flag"] = True +dreams = scopesim.OpticalTrain(cmds) +dreams["detector_linearity"].include = False + +print("scopesim package loaded successfully.") +from scopesim_templates.extragalactic import galaxy +src = galaxy("kc96/s0", z=1.5, amplitude=17, filter_curve="J", pixel_scale=0.01, r_eff=2.5, n=4, ellip=0.5, theta=45, extend=3) + +dreams.observe(src) +print("yessss anjali") +hdus = dreams.readout() +dreams.readout(filename="gal.fits") +# Observe the source +dreams.observe(src) + +# Readout and plot +hdus = dreams.readout() + +plt.subplot(122) +im = hdus[0][1].data +plt.imshow(im, norm=LogNorm()) +plt.colorbar() +plt.title("Observed Galaxy Field") +plt.xlabel("X Pixels") +plt.ylabel("Y Pixels") + +detector_order = [2, 1, 4, 3, 6, 5] +plt.figure(figsize=(20, 20)) +for plot_number, hdu_number in enumerate(detector_order, 1): + plt.subplot(3, 2, plot_number) + plt.imshow(np.log10(src.fields[0].data), origin="lower") + plt.colorbar() + plt.title(f"HDU {hdu_number}") + +plt.show() + + + + diff --git a/DREAMS/Test_codes/GaussianDiffractionPSF.py b/DREAMS/Test_codes/GaussianDiffractionPSF.py new file mode 100644 index 00000000..cad84dcf --- /dev/null +++ b/DREAMS/Test_codes/GaussianDiffractionPSF.py @@ -0,0 +1,68 @@ +import os +import numpy as np +from astropy import units as u +from matplotlib import pyplot as plt +from matplotlib.colors import LogNorm +from astropy.convolution import Gaussian2DKernel +from scopesim.utils import quantify +from scopesim import rc +from scopesim_templates.stellar import star_field +from scopesim.optics.fov_manager import FOVManager + +# Set plotting flag +PLOTS = True + +# GaussianDiffractionPSF Class +class GaussianDiffractionPSF: + def __init__(self, diameter=0.1, **kwargs): # Default diameter is 0.1 m + self.meta = {"diameter": diameter, "z_order": [242, 642]} + self.required_keys = {"pixel_scale"} + self.valid_waverange = [11610.0 * u.angstrom.to(u.micron), # Min wavelength in microns + 13330.0 * u.angstrom.to(u.micron)] # Max wavelength in microns + + def update(self, **kwargs): + if "diameter" in kwargs: + self.meta["diameter"] = kwargs["diameter"] + + def get_kernel(self, pixel_scale): + wave_min = 11610.0 * u.angstrom.to(u.micron) # Using J band min wave + wave_max =13330.0 * u.angstrom.to(u.micron) # Using J band max wave + wave = 0.5 * (wave_max + wave_min) # Average wave + wave = quantify(wave, u.um) + + + diameter = quantify(self.meta["diameter"], u.m).to(u.um) + fwhm = 1.22 * (wave / diameter) * u.rad.to(u.arcsec) / pixel_scale + + sigma = fwhm.value / 2.35 + kernel = Gaussian2DKernel(sigma, mode="center").array + kernel /= np.sum(kernel) + + return kernel + + def plot(self, pixel_scale): + kernel = self.get_kernel(pixel_scale) + + size = kernel.shape[0] + arcsec_extent = size * pixel_scale / 2 + x = np.linspace(-arcsec_extent, arcsec_extent, size) + y = np.linspace(-arcsec_extent, arcsec_extent, size) + + plt.figure(figsize=(8, 6)) + plt.imshow(kernel, origin='lower', extent=[x[0], x[-1], y[0], y[-1]], cmap='plasma', norm=LogNorm(vmin=1e-6, vmax=1)) + plt.colorbar(label='Intensity') + plt.title(f"Gaussian Diffraction PSF (Diameter = {self.meta['diameter']} m, J Band Wavelength)") + plt.xlabel("X [arcseconds]") + plt.ylabel("Y [arcseconds]") + plt.gca().set_aspect('equal', adjustable='box') + plt.grid(False) + plt.show() + +# Define the pixel scale for DREAMS +pixel_scale = 2.48 # Arcseconds per pixel for DREAMS + +# Instantiate the GaussianDiffractionPSF class +gaussian_psf = GaussianDiffractionPSF(diameter=0.5) + +# Plot the Gaussian Diffraction PSF +gaussian_psf.plot(pixel_scale) diff --git a/DREAMS/Test_codes/LMC.py b/DREAMS/Test_codes/LMC.py new file mode 100644 index 00000000..dd52859c --- /dev/null +++ b/DREAMS/Test_codes/LMC.py @@ -0,0 +1,59 @@ +"""A cluster in the LMC.""" + +import os +import pytest +import numpy as np +from astropy.io.fits import HDUList +from matplotlib import pyplot as plt +from matplotlib.colors import LogNorm +import scopesim +import synphot +from scopesim import Source +from astropy.io import fits + + +from scopesim import rc +from scopesim.source.source_templates import star_field +import scopesim_templates as sim_tp +from scopesim.optics.fov_manager import FOVManager + +PLOTS = True + +if rc.__config__["!SIM.tests.run_integration_tests"] is False: + pytestmark = pytest.mark.skip("Ignoring DREAMS integration tests") + +cmds = scopesim.UserCommands(use_instrument="DREAMS") +cmds["!OBS.dit"] = 1000 +cmds["!OBS.ndit"] = 1000 +cmds["!DET.bin_size"] = 1 +cmds["!OBS.sky.bg_mag"] = 14.9 +cmds["!OBS.sky.filter_name"] = "J" +cmds["SIM.sub_pixel.flag"] = True +dreams = scopesim.OpticalTrain(cmds) +dreams["detector_linearity"].include = False + +print("scopesim package loaded successfully.") +src = sim_tp.stellar.clusters.cluster(mass=10000, distance=1800, core_radius=500, seed=9002) + +dreams.observe(src) +hdus = dreams.readout("LMC.fits") + +dreams.optics_manager.system_transmission(plot=True) + +# detector_order = [2, 1, 4, 3, 6, 5] +detector_order = [1, 2, 3, 4, 5, 6] + +plt.figure(figsize=(20, 20)) +# Nothing visible here because the sources are too small. +for plot_number, hdu_number in enumerate(detector_order, 1): + plt.subplot(3, 2, plot_number) + plt.imshow(hdus[0][hdu_number].data, norm='log', cmap="hot") + plt.colorbar() + +# Does show something. +plt.figure(figsize=(20, 20)) +plt.subplot(1, 1, 1) +plt.imshow(hdus[0][2].data, norm='log', cmap="hot") +plt.colorbar() + +plt.show() diff --git a/DREAMS/Test_codes/Lc.py b/DREAMS/Test_codes/Lc.py new file mode 100644 index 00000000..3e37bb18 --- /dev/null +++ b/DREAMS/Test_codes/Lc.py @@ -0,0 +1,54 @@ +#cluster in the LMC +import os +import pytest +import numpy as np +from astropy.io.fits import HDUList +from matplotlib import pyplot as plt +from matplotlib.colors import LogNorm +import scopesim +import synphot +from scopesim import Source +from astropy.io import fits + + +from scopesim import rc +from scopesim.source.source_templates import star_field +import scopesim_templates as sim_tp +from scopesim_templates.stellar import cluster + +from scopesim.optics.fov_manager import FOVManager + +PLOTS = True + +if rc.__config__["!SIM.tests.run_integration_tests"] is False: + pytestmark = pytest.mark.skip("Ignoring DREAMS integration tests") + +cmds = scopesim.UserCommands(use_instrument="DREAMS") +cmds["!OBS.dit"] = 1000 +cmds["!OBS.ndit"] = 1000 +cmds["!DET.bin_size"] = 1 +cmds["!OBS.sky.bg_mag"] = 14.9 +cmds["!OBS.sky.filter_name"] = "J" +cmds["SIM.sub_pixel.flag"] = True +dreams = scopesim.OpticalTrain(cmds) +dreams["detector_linearity"].include = False + +print("scopesim package loaded successfully.") +src = cluster(mass=1000, distance=50000, core_radius=500, seed=9002) + +dreams.observe(src) +print("yessss anjali") +hdus = dreams.readout() +dreams.readout(filename="Lc.fits") +#plt.subplot(121) +#wave = np.arange(3000, 11000) +#plt.plot(wave, dreams.optics_manager.system_transmission(wave)) +plt.subplot(122) +im = hdus[0][1].data +plt.imshow(im, norm=LogNorm()) +plt.colorbar() +plt.title("Observed Star Field") +plt.xlabel("X Pixels") +plt.ylabel("Y Pixels") +plt.grid() +plt.show() diff --git a/DREAMS/Test_codes/cluster.py b/DREAMS/Test_codes/cluster.py new file mode 100644 index 00000000..e238512e --- /dev/null +++ b/DREAMS/Test_codes/cluster.py @@ -0,0 +1,118 @@ +import os +import pytest +import numpy as np +from astropy.io.fits import HDUList +from matplotlib import pyplot as plt +from matplotlib.colors import LogNorm +import scopesim + +from scopesim import rc +from scopesim.source.source_templates import star_field +import scopesim_templates as sim_tp + +PLOTS = True + +if rc.__config__["!SIM.tests.run_integration_tests"] is False: + pytestmark = pytest.mark.skip("Ignoring DREAMS integration tests") + + +class TestLoads: + def test_scopesim_loads_package(self): + dreams = scopesim.OpticalTrain("DREAMS") + assert isinstance(dreams, scopesim.OpticalTrain) # Corrected syntax + print("scopesim package loaded successfully.") + + +class TestObserves: + def test_something_comes_out(self): + print("Starting observation test...") + + # Setting the width to 10000 arcsec makes the field fill the image. + # A with of 700 works as well, but covers only a fraction of the + # middle two detectors. + src = star_field(10000, 10, 20, width=10000) + + cmds = scopesim.UserCommands(use_instrument="DREAMS") + cmds["!OBS.dit"] = 8 + cmds["!DET.bin_size"] = 1 + cmds["!OBS.sky.bg_mag"] = 14.9 + cmds["!OBS.sky.filter_name"] = "J" + cmds["SIM.sub_pixel.flag"] = True + + dreams = scopesim.OpticalTrain(cmds) + dreams["detector_linearity"].include = False + + dreams.observe(src) + + hdus = dreams.readout("dreams.fits") + + print(f"Observation completed. HDUList type: {type(hdus[0])}") + + if PLOTS: + plt.subplot(121) + wave = np.arange(3000, 11000) + plt.plot(wave, dreams.optics_manager.system_transmission(wave)) + + plt.subplot(122) + im = hdus[0][1].data + plt.imshow(im, norm=LogNorm()) + plt.colorbar() + plt.title("Observed Star Field") + plt.xlabel("X Pixels") + plt.ylabel("Y Pixels") + plt.grid() + plt.show() + + detector_order = [2, 1, 4, 3, 6, 5] + plt.figure(figsize=(20, 20)) + for plot_number, hdu_number in enumerate(detector_order, 1): + plt.subplot(3, 2, plot_number) + data = hdus[0][hdu_number].data + med = np.median(data) + std = np.std(data) + vmin = med + vmax = med + 5 * std + plt.imshow(data, origin="lower", norm=LogNorm(vmin=vmin, vmax=vmax)) + plt.colorbar() + plt.show() + + @pytest.mark.slow + def test_observes_from_scopesim_templates(self): + print("Starting scopesim templates observation test...") + src = sim_tp.stellar.cluster(mass=10000, distance=2000, core_radius=1) + + dreams = scopesim.OpticalTrain("DREAMS") + dreams.observe(src) + + dreams.cmds["!OBS.dit"] = 10 + hdus = dreams.readout() + + assert isinstance(hdus[0], HDUList) + print("Observation from scopesim templates completed.") + + if PLOTS: + im = hdus[0][1].data + plt.imshow(im, norm=LogNorm(), cmap="hot") + plt.colorbar() + plt.show() + + @pytest.mark.slow + def test_saves_readout_to_disc(self): + print("Starting test to save readout to disk...") + src = sim_tp.stellar.cluster(mass=10000, distance=2000, core_radius=1) + dreams = scopesim.OpticalTrain("DREAMS") + dreams.observe(src) + dreams.readout(filename="GNANU.fits") + + assert os.path.exists("GNANU.fits") + print("Readout saved to GNANU.fits.") + + +def run_test_and_plot(): + test_observes = TestObserves() + test_observes.test_something_comes_out() + + +# Run the test and plot as soon as the module is imported +if __name__ == '__main__': + run_test_and_plot() diff --git a/DREAMS/Test_codes/ellip.py b/DREAMS/Test_codes/ellip.py new file mode 100644 index 00000000..7004683b --- /dev/null +++ b/DREAMS/Test_codes/ellip.py @@ -0,0 +1,55 @@ +#Elliptical Galaxy +import os +import pytest +import numpy as np +from astropy.io.fits import HDUList +from matplotlib import pyplot as plt +from matplotlib.colors import LogNorm +import scopesim +import synphot +from scopesim_templates.extragalactic.galaxies import elliptical +from astropy.io import fits + + +from scopesim import rc +from scopesim.source.source_templates import star_field +import scopesim_templates as sim_tp +from scopesim.optics.fov_manager import FOVManager + +PLOTS = True + +if rc.__config__["!SIM.tests.run_integration_tests"] is False: + pytestmark = pytest.mark.skip("Ignoring DREAMS integration tests") + +cmds = scopesim.UserCommands(use_instrument="DREAMS") +cmds["!OBS.dit"] = 1000 +cmds["!OBS.ndit"] = 1000 +cmds["!DET.bin_size"] = 1 +cmds["!OBS.sky.bg_mag"] = 14.9 +cmds["!OBS.sky.filter_name"] = "J" +cmds["SIM.sub_pixel.flag"] = True +dreams = scopesim.OpticalTrain(cmds) +dreams["detector_linearity"].include = False + +print("scopesim package loaded successfully.") +src = elliptical(half_light_radius=11500, pixel_scale=2.48, filter_name="J", amplitude=17, normalization="total", n=4, ellipticity=0.5, angle=30) +dreams.observe(src) +hdus = dreams.readout() +dreams.readout(filename="ellip.fits") +plt.subplot(122) +im = hdus[0][1].data +plt.imshow(im, norm=LogNorm()) +plt.colorbar() +plt.title("Observed Galaxy Field") +plt.xlabel("X Pixels") +plt.ylabel("Y Pixels") + +detector_order = [2, 1, 4, 3, 6, 5] +plt.figure(figsize=(20, 20)) +for plot_number, hdu_number in enumerate(detector_order, 1): + plt.subplot(3, 2, plot_number) + plt.imshow(np.log10(src.fields[0].data), origin="lower") + plt.colorbar() + plt.title(f"HDU {hdu_number}") + +plt.show() diff --git a/DREAMS/Test_codes/field.ipynb b/DREAMS/Test_codes/field.ipynb new file mode 100644 index 00000000..a988c514 --- /dev/null +++ b/DREAMS/Test_codes/field.ipynb @@ -0,0 +1,253 @@ +{ + "cells": [ + { + "cell_type": "code", + "execution_count": null, + "metadata": { + "colab": { + "base_uri": "https://localhost:8080/" + }, + "id": "Mczzz3KcUzL0", + "outputId": "0748f1e7-7361-4346-cc74-00e3cc967baa" + }, + "outputs": [], + "source": [ + "import numpy as np\n", + "from scopesim_templates.stellar import cluster\n", + "import astropy\n", + "from astropy.table import QTable\n", + "import astropy.units as u\n", + "import numpy as np\n", + "import numpy as np\n", + "from astropy.table import Table\n", + "import matplotlib.pyplot as plt\n", + "from astroquery.simbad import Simbad\n", + "from astropy.coordinates import SkyCoord\n", + "import astropy.units as u\n", + "import numpy as np\n", + "from astropy.table import Table\n", + "import matplotlib.pyplot as plt\n", + "from astroquery.gaia import Gaia\n", + "import astropy.units as u\n", + "from astropy.coordinates import SkyCoord\n", + "from scopesim_templates.stellar import star_field, star_grid\n", + "import numpy as np\n", + "from astropy.table import Table\n", + "import matplotlib.pyplot as plt\n", + "from astroquery.gaia import Gaia\n", + "import astropy.units as u\n", + "from astropy.coordinates import SkyCoord\n" + ] + }, + { + "cell_type": "code", + "execution_count": null, + "metadata": {}, + "outputs": [], + "source": [] + }, + { + "cell_type": "code", + "execution_count": null, + "metadata": {}, + "outputs": [], + "source": [ + "src = cluster(mass=1E3, distance=50000, core_radius=1)" + ] + }, + { + "cell_type": "code", + "execution_count": null, + "metadata": { + "colab": { + "base_uri": "https://localhost:8080/" + }, + "id": "hQvqPUhqVjUZ", + "outputId": "583b2ac8-7abe-40a5-bbeb-182ba3bede4e" + }, + "outputs": [], + "source": [ + "src.fields\n" + ] + }, + { + "cell_type": "code", + "execution_count": null, + "metadata": { + "colab": { + "base_uri": "https://localhost:8080/", + "height": 714 + }, + "id": "EimFNanwVrDD", + "outputId": "75ba5c44-4072-4889-bb18-6f94171222c7" + }, + "outputs": [], + "source": [ + "import matplotlib.pyplot as plt\n", + "\n", + "plt.figure(figsize=(8, 8))\n", + "plt.plot(src.fields[0][\"x\"], src.fields[0][\"y\"], '.')\n", + "plt.xlabel(\"X [arcsec]\")\n", + "plt.ylabel(\"Y [arcsec]\")" + ] + }, + { + "cell_type": "code", + "execution_count": null, + "metadata": { + "colab": { + "base_uri": "https://localhost:8080/", + "height": 1000 + }, + "id": "uUnEhR9ClNDp", + "outputId": "31f08023-3207-48e6-dc82-14f08867fb28" + }, + "outputs": [], + "source": [ + "\n", + "# Define the query for Gaia\n", + "query = \"\"\"\n", + "SELECT TOP 1000\n", + " source_id,\n", + " ra,\n", + " dec,\n", + " phot_g_mean_mag,\n", + " bp_rp\n", + "FROM gaiadr2.gaia_source\n", + "WHERE CONTAINS(\n", + " POINT('ICRS', ra, dec),\n", + " CIRCLE('ICRS', 75.0, -65.0, 5)\n", + ")=1\n", + "\"\"\"\n", + "\n", + "# Execute the query\n", + "job = Gaia.launch_job(query)\n", + "result = job.get_results()\n", + "\n", + "# Convert the results to an Astropy table\n", + "star_table = Table(result)\n", + "\n", + "# Display the table\n", + "print(star_table)\n", + "\n", + "# Plot the star field\n", + "plt.figure(figsize=(10, 10))\n", + "plt.scatter(star_table['ra'], star_table['dec'], s=10, c='white')\n", + "plt.gca().invert_yaxis() # Invert y-axis to match astronomical convention\n", + "plt.gca().set_facecolor('black') # Set the background color to black\n", + "plt.title('Star Field of Dorado Constellation')\n", + "plt.xlabel('RA (degrees)')\n", + "plt.ylabel('Dec (degrees)')\n", + "plt.show()\n" + ] + }, + { + "cell_type": "code", + "execution_count": null, + "metadata": { + "colab": { + "base_uri": "https://localhost:8080/", + "height": 1000 + }, + "id": "teaFHYJDmH8O", + "outputId": "48a550f6-69fe-4ba5-92f3-81364ef49be0" + }, + "outputs": [], + "source": [ + "\n", + "\n", + "# Define the query for Gaia\n", + "query = \"\"\"\n", + "SELECT TOP 1000\n", + " source_id,\n", + " ra,\n", + " dec,\n", + " phot_g_mean_mag,\n", + " bp_rp\n", + "FROM gaiadr2.gaia_source\n", + "WHERE CONTAINS(\n", + " POINT('ICRS', ra, dec),\n", + " CIRCLE('ICRS', 90.0, -75.0, 5)\n", + ")=1\n", + "\"\"\"\n", + "\n", + "# Execute the query\n", + "job = Gaia.launch_job(query)\n", + "result = job.get_results()\n", + "\n", + "# Convert the results to an Astropy table\n", + "star_table = Table(result)\n", + "\n", + "# Display the table\n", + "print(star_table)\n", + "\n", + "# Plot the star field\n", + "plt.figure(figsize=(10, 10))\n", + "plt.scatter(star_table['ra'], star_table['dec'], s=10, c='white')\n", + "plt.gca().invert_yaxis() # Invert y-axis to match astronomical convention\n", + "plt.gca().set_facecolor('black') # Set the background color to black\n", + "plt.title('Star Field of Mensa Constellation')\n", + "plt.xlabel('RA (degrees)')\n", + "plt.ylabel('Dec (degrees)')\n", + "plt.show()\n" + ] + }, + { + "cell_type": "code", + "execution_count": null, + "metadata": { + "colab": { + "base_uri": "https://localhost:8080/", + "height": 617 + }, + "id": "Mtz9oAyYmu5o", + "outputId": "7a86eefd-bd6f-4fd9-f5b2-49c36208e2c3" + }, + "outputs": [], + "source": [ + "\n", + "field = star_field(n=400, mmin=15, mmax=25, width=20, height=20, filter_name=\"Ks\")\n", + "grid = star_grid(n=400, mmin=15, mmax=25, separation=1 , filter_name=\"Ks\")\n", + "\n", + "plt.figure(figsize=(14, 7))\n", + "plt.subplot(121)\n", + "\n", + "size = np.log10(field.fields[0][\"weight\"])**2\n", + "plt.scatter(field.fields[0][\"x\"], field.fields[0][\"y\"], s=size, marker=\"o\")" + ] + }, + { + "cell_type": "code", + "execution_count": null, + "metadata": { + "id": "tsRbG1pAnTch" + }, + "outputs": [], + "source": [] + } + ], + "metadata": { + "colab": { + "provenance": [] + }, + "kernelspec": { + "display_name": "Python 3 (ipykernel)", + "language": "python", + "name": "python3" + }, + "language_info": { + "codemirror_mode": { + "name": "ipython", + "version": 3 + }, + "file_extension": ".py", + "mimetype": "text/x-python", + "name": "python", + "nbconvert_exporter": "python", + "pygments_lexer": "ipython3", + "version": "3.12.10" + } + }, + "nbformat": 4, + "nbformat_minor": 4 +} diff --git a/DREAMS/Test_codes/inst_pkgs b/DREAMS/Test_codes/inst_pkgs new file mode 120000 index 00000000..c25bddb6 --- /dev/null +++ b/DREAMS/Test_codes/inst_pkgs @@ -0,0 +1 @@ +../.. \ No newline at end of file diff --git a/DREAMS/Test_codes/star_1.py b/DREAMS/Test_codes/star_1.py new file mode 100644 index 00000000..55ac0556 --- /dev/null +++ b/DREAMS/Test_codes/star_1.py @@ -0,0 +1,63 @@ +import os +import pytest +import numpy as np +from astropy.io.fits import HDUList +from matplotlib import pyplot as plt +from matplotlib.colors import LogNorm +import scopesim +import synphot +from scopesim import Source +from astropy.io import fits + + +from scopesim import rc +from scopesim.source.source_templates import star_field +import scopesim_templates as sim_tp +from scopesim.optics.fov_manager import FOVManager + +PLOTS = True + +if rc.__config__["!SIM.tests.run_integration_tests"] is False: + pytestmark = pytest.mark.skip("Ignoring DREAMS integration tests") + +cmds = scopesim.UserCommands(use_instrument="DREAMS") +cmds["!OBS.dit"] = 10 +cmds["!DET.bin_size"] = 1 +cmds["!OBS.sky.bg_mag"] = 14.9 +cmds["!OBS.sky.filter_name"] = "J" +cmds["SIM.sub_pixel.flag"] = True +dreams = scopesim.OpticalTrain(cmds) +dreams["detector_linearity"].include = False + +print("scopesim package loaded successfully.") +x, y = np.meshgrid(np.arange(100), np.arange(100)) +img = np.exp(-1 * ( ( (x - 50) / 5)**2 + ( (y - 50) / 5)**2 ) ) +# Fits headers of the image. Yes it needs a WCS +hdr = fits.Header(dict(NAXIS=2,NAXIS1=img.shape[0]+1,NAXIS2=img.shape[1]+1, CRPIX1=img.shape[0] / 2, CRPIX2=img.shape[1] / 2, CRVAL1=0, CRVAL2=0, CDELT1=0.2/3600, CDELT2=0.2/3600, +CUNIT1="DEG", CUNIT2="DEG", CTYPE1='RA---TAN', CTYPE2='DEC--TAN')) +# Creating an ImageHDU object +hdu = fits.ImageHDU(data=img, header=hdr) + +# Creating of a black body spectrum +wave = np.arange(1000, 35000, 10 ) +bb = synphot.models.BlackBody1D(temperature=5000) +sp = synphot.SourceSpectrum(synphot.Empirical1D, points=wave, lookup_table=bb(wave)) +src = Source(image_hdu=hdu, spectra=sp) +src.shift(10, 10) +dreams.observe(src) +print("yessss anjali") +hdus = dreams.readout() +#dreams.readout(filename="Han.fits") +plt.subplot(121) +wave = np.arange(3000, 11000) +plt.plot(wave, dreams.optics_manager.system_transmission(wave)) +plt.subplot(122) +im = hdus[0][1].data +detector_order = [2, 1, 4, 3, 6, 5] +plt.figure(figsize=(20, 20)) +for plot_number, hdu_number in enumerate(detector_order, 1): + plt.subplot(3, 2, plot_number) + plt.imshow(hdus[0][hdu_number].data, origin="lower", norm=LogNorm()) + plt.colorbar() + +plt.show() diff --git a/DREAMS/default.yaml b/DREAMS/default.yaml new file mode 100644 index 00000000..eb545dbb --- /dev/null +++ b/DREAMS/default.yaml @@ -0,0 +1,44 @@ +### default observation parameters needed for DREAMS simulation +object : configuration +alias : OBS +name : DREAMS_default_configuration +description : default parameters needed for the DREAMS simulation + + +packages: + - DREAMS + +yamls : + - DREAMS.yaml + - DREAMS_InGaAs.yaml +properties : + airmass : 1.2 + declination : -31.273 + hour_angle : 0 + pupil_angle : 0 + dit : 8 + ndit : 1 + filter_name : J + sky : + bg_mag : 14.5 + filter_name : J + +--- + +### default simulation parameters needed for DREAMS simulation +object : simulation +alias : OBS +name : simulation_paramters +description : RC simulation paramters + +properties : + random : + seed : None + + spectral : + wave_min : 1.17 + wave_mid : 1.42 + wave_max : 1.67 + + computing : + preload_field_of_view : False diff --git a/DREAMS/filters/H.dat b/DREAMS/filters/H.dat new file mode 100644 index 00000000..7a445e31 --- /dev/null +++ b/DREAMS/filters/H.dat @@ -0,0 +1,367 @@ +# source : Generic_Bessell.I SVO +# wavelength_unit : angstrom +# download_date : 2020-05-23 +wavelength transmission +14900.0 0.90802 +14905.0 0.958796 +14910.0 0.913225 +14915.0 0.849135 +14920.0 0.884093 +14925.0 0.915954 +14930.0 0.928744 +14935.0 0.949936 +14940.0 0.945656 +14945.0 0.927238 +14950.0 0.900331 +14955.0 0.895292 +14960.0 0.898208 +14965.0 0.900709 +14970.0 0.943867 +14975.0 0.955807 +14980.0 0.932836 +14985.0 0.944357 +14990.0 0.954788 +14995.0 0.954577 +15000.0 0.970904 +15005.0 0.985127 +15009.9 0.986479 +15015.0 0.973983 +15020.0 0.96211 +15025.0 0.957062 +15029.9 0.942257 +15035.0 0.916619 +15040.0 0.893669 +15045.0 0.906644 +15049.9 0.93975 +15055.0 0.973944 +15060.0 0.987869 +15065.0 0.993428 +15069.9 0.986808 +15075.0 0.981119 +15080.0 0.964471 +15085.0 0.927070 +15089.9 0.928636 +15095.0 0.970236 +15100.0 0.986694 +15105.0 0.985894 +15109.9 0.986642 +15115.0 0.989801 +15120.0 0.987493 +15125.0 0.978365 +15129.9 0.976059 +15135.0 0.97338 +15140.0 0.971952 +15145.0 0.980061 +15149.9 0.987342 +15155.0 0.991995 +15160.0 0.985098 +15165.0 0.977038 +15169.9 0.977478 +15175.0 0.978418 +15180.0 0.983991 +15185.0 0.984922 +15189.9 0.980764 +15195.0 0.985204 +15200.0 0.990749 +15205.0 0.992445 +15209.9 0.99613 +15215.0 0.994892 +15220.0 0.993991 +15225.0 0.997639 +15230.0 0.998183 +15235.0 0.996923 +15240.0 0.995911 +15245.0 0.992753 +15250.0 0.992698 +15255.0 0.992474 +15260.0 0.991742 +15265.0 0.991178 +15270.0 0.990807 +15275.0 0.993021 +15280.0 0.996219 +15285.0 0.996003 +15290.0 0.995775 +15295.0 0.995845 +15300.0 0.995311 +15305.0 0.995772 +15310.0 0.994481 +15315.0 0.993689 +15320.0 0.996246 +15325.0 0.996974 +15330.0 0.996282 +15335.0 0.995132 +15340.0 0.993863 +15345.0 0.992836 +15350.0 0.991561 +15355.0 0.992123 +15360.0 0.993688 +15365.0 0.994914 +15370.0 0.99542 +15375.0 0.996934 +15380.0 0.998167 +15385.0 0.9973 +15390.0 0.995481 +15395.0 0.994804 +15400.0 0.995068 +15405.0 0.994998 +15410.0 0.995093 +15415.0 0.995186 +15420.0 0.995262 +15425.0 0.996167 +15430.0 0.997174 +15435.0 0.997792 +15440.0 0.997405 +15445.0 0.997537 +15450.0 0.998712 +15455.0 0.998904 +15460.0 0.998787 +15465.0 0.999114 +15470.0 0.999524 +15475.0 0.99966 +15480.0 0.999717 +15485.0 0.999892 +15490.0 0.999952 +15495.0 0.999882 +15500.0 0.999877 +15505.0 0.999828 +15510.0 0.999648 +15515.0 0.999403 +15520.0 0.999029 +15525.0 0.999389 +15530.0 0.999835 +15535.0 0.9999 +15540.0 0.999712 +15545.0 0.99966 +15550.0 0.999874 +15555.0 0.999949 +15560.0 0.999817 +15565.0 0.999734 +15570.0 0.999882 +15575.0 0.99994 +15580.0 0.999821 +15585.0 0.999696 +15590.0 0.99973 +15595.0 0.999773 +15600.0 0.999786 +15605.0 0.999804 +15610.0 0.999806 +15615.0 0.999774 +15620.0 0.999318 +15625.0 0.999153 +15630.0 0.999566 +15634.9 0.999677 +15640.0 0.999438 +15645.0 0.999379 +15650.0 0.999713 +15654.9 0.99973 +15660.0 0.999565 +15665.0 0.999507 +15670.0 0.999153 +15674.9 0.998277 +15680.0 0.996639 +15685.0 0.993974 +15690.0 0.989486 +15694.9 0.98305 +15700.0 0.975111 +15705.0 0.966649 +15710.0 0.958776 +15714.9 0.952716 +15720.0 0.949206 +15725.0 0.948576 +15730.0 0.950842 +15734.9 0.956052 +15740.0 0.964453 +15745.0 0.975439 +15750.0 0.986076 +15754.9 0.988766 +15760.0 0.981985 +15765.0 0.973708 +15770.0 0.967999 +15774.9 0.965006 +15780.0 0.964174 +15785.0 0.964856 +15790.0 0.96689 +15794.9 0.969905 +15800.0 0.973248 +15805.0 0.976749 +15810.0 0.980261 +15814.9 0.983573 +15820.0 0.986629 +15825.0 0.989165 +15830.0 0.991148 +15834.9 0.993291 +15840.0 0.995228 +15845.0 0.996487 +15850.0 0.997388 +15855.0 0.998035 +15860.0 0.998226 +15865.0 0.998353 +15870.0 0.99852 +15875.0 0.999009 +15880.0 0.99961 +15885.0 0.999815 +15890.0 0.999873 +15895.0 0.999829 +15900.0 0.999595 +15905.0 0.999555 +15910.0 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b/DREAMS/filters/H_block.dat @@ -0,0 +1,8 @@ +# source : Generic_Bessell.I SVO +# wavelength_unit : angstrom +# download_date : 2020-05-23 +wavelength transmission +14900.0 0.0 +16700.0 0.0 + + diff --git a/DREAMS/filters/I.dat b/DREAMS/filters/I.dat new file mode 100644 index 00000000..2fbe0590 --- /dev/null +++ b/DREAMS/filters/I.dat @@ -0,0 +1,29 @@ +# source : Generic_Bessell.I SVO +# wavelength_unit : angstrom +# download_date : 2020-05-23 +wavelength transmission +7000.0 0.0000000000 +7100.0 0.0240000000 +7200.0 0.2320000000 +7300.0 0.5550000000 +7400.0 0.7850000000 +7500.0 0.9100000000 +7600.0 0.9650000000 +7700.0 0.9850000000 +7800.0 0.9900000000 +7900.0 0.9950000000 +8000.0 1.0000000000 +8100.0 1.0000000000 +8200.0 0.9900000000 +8300.0 0.9800000000 +8400.0 0.9500000000 +8500.0 0.9100000000 +8600.0 0.8600000000 +8700.0 0.7500000000 +8800.0 0.5600000000 +8900.0 0.3300000000 +9000.0 0.1500000000 +9100.0 0.0300000000 +9200.0 0.0000000000 + + diff --git a/DREAMS/filters/J.dat b/DREAMS/filters/J.dat new file mode 100644 index 00000000..2bc87cd8 --- /dev/null +++ b/DREAMS/filters/J.dat @@ -0,0 +1,341 @@ +# source : Generic_Bessell.I SVO +# wavelength_unit : angstrom +# download_date : 2020-05-23 +wavelength transmission +11610.0 0.924793 +11615.0 0.939469 +11620.0 0.935235 +11625.0 0.940330 +11630.0 0.967153 +11635.0 0.963672 +11640.0 0.962931 +11645.0 0.968273 +11700.0 0.976777 +11705.0 0.970486 +11710.0 0.971351 +11715.0 0.978771 +11720.0 0.974734 +11725.0 0.969387 +11730.0 0.968874 +11735.0 0.950085 +11740.0 0.926160 +11745.0 0.950492 +11750.0 0.970293 +11755.0 0.969632 +11760.0 0.985673 +11765.0 0.992625 +11770.0 0.976347 +11775.0 0.939686 +11780.0 0.939704 +11785.0 0.967125 +11790.0 0.977988 +11795.0 0.963961 +11800.0 0.970498 +11805.0 0.984841 +11810.0 0.973231 +11815.0 0.931265 +11820.0 0.901812 +11825.0 0.940128 +11830.0 0.97894 +11835.0 0.983834 +11840.0 0.963308 +11845.0 0.942425 +11850.0 0.948056 +11855.0 0.974568 +11860.0 0.985875 +11865.0 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