From da3b9ee99c1aceeead870ce12663ac130f610b06 Mon Sep 17 00:00:00 2001
From: Sowmya Muduganti <si@Sowmyas-MBP.Dlink>
Date: Tue, 2 Mar 2021 18:11:58 +0530
Subject: [PATCH] [Gokulnath P/Sowmya M] | ADD | Covid report for patients with
 co-morbidities

---
 openmrs/apps/reports/reports.json             |  8 +++++++
 .../sql/patientWithComorbiditiesReport.sql    | 23 +++++++++++++++++++
 2 files changed, 31 insertions(+)
 create mode 100644 openmrs/apps/reports/sql/patientWithComorbiditiesReport.sql

diff --git a/openmrs/apps/reports/reports.json b/openmrs/apps/reports/reports.json
index 1a92c7b4a..311c58dd9 100644
--- a/openmrs/apps/reports/reports.json
+++ b/openmrs/apps/reports/reports.json
@@ -1,4 +1,12 @@
 {
+    "patientWithComorbidities": {
+        "name": "Patient With Co-morbidities",
+        "type": "MRSGeneric",
+        "requiredPrivilege": "app:reports",
+        "config": {
+            "sqlPath": "/var/www/bahmni_config/openmrs/apps/reports/sql/patientWithComorbiditiesReport.sql"
+        }
+    },
     "visitReport10": {
         "name": "Visit Report",
         "type": "visits",
diff --git a/openmrs/apps/reports/sql/patientWithComorbiditiesReport.sql b/openmrs/apps/reports/sql/patientWithComorbiditiesReport.sql
new file mode 100644
index 000000000..0a3242cea
--- /dev/null
+++ b/openmrs/apps/reports/sql/patientWithComorbiditiesReport.sql
@@ -0,0 +1,23 @@
+SELECT pp.patient_id as "Patient ID",CONCAT(pn.given_name," ",pn.family_name) as "Patient Name",ROUND(DATEDIFF(CURDATE(), p2.birthdate)/365.25, 0 ) as "Age" , p2.gender as "Gender", phn.value as "Phone Number", co.name as "CoMorbidities"
+FROM patient_program pp
+JOIN program p ON pp.program_id = p.program_id AND p.name = "COVID-19 Program"
+JOIN patient_program_attribute ppa ON ppa.patient_program_id = pp.patient_program_id
+JOIN program_attribute_type pat ON pat.program_attribute_type_id = ppa.attribute_type_id AND ppa.value_reference="true"
+JOIN person p2 ON pp.patient_id = p2.person_id
+JOIN person_name pn ON p2.person_id =pn.person_id
+LEFT JOIN (
+	SELECT pa.value, pa.person_id
+	FROM person_attribute pa
+	JOIN person_attribute_type pat ON pa.person_attribute_type_id = pat.person_attribute_type_id
+	WHERE pat.name = "secondaryContact"
+) phn ON phn.person_id = pp.patient_id
+JOIN (
+	SELECT DISTINCT o.person_id , cn.name
+	FROM obs o
+	JOIN concept_name cn
+	ON o.value_coded = cn.concept_id and cn.concept_name_type = "FULLY_SPECIFIED"
+	WHERE o.concept_id = (
+		SELECT concept_id from concept_name where name = "COVID-19-Starter, Comorbidities"
+	)
+) co ON co.person_id=pn.person_id
+where pp.patient_id NOT IN (SELECT DISTINCT person_id FROM obs where concept_id = (SELECT concept_id FROM concept_name where name="COVID-19-Starter, Dose-1"));