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DESCRIPTION
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39 lines (39 loc) · 1.02 KB
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Package: FastGxC
Title: Efficient and Powerful Software for Simulating Data and Detecting Context-specific eQTL Effects in Multi-context Genomic Studies
Version: 0.0.0.9000
Authors@R:
person("Lena", "Krockenberger", , "lkrocken@g.ucla.edu", role = c("aut", "cre"),
comment = c(ORCID = "0009-0002-5987-5496"))
Description: Functions to run FastGxC decomposition and subsequent context-specific eQTL mapping with multiple testing adjustment. This software also can be used to simulate data and run eQTL mapping on toy examples.
Imports:
dplyr,
data.table,
MatrixEQTL,
mvtnorm,
reshape2,
magrittr,
TreeQTL,
matrixcalc,
reticulate,
readr,
Rcpp
LinkingTo:
Rcpp
Suggests:
qvalue,
TreeBH
Depends:
dplyr,
data.table,
MatrixEQTL,
mvtnorm,
reshape2,
magrittr,
TreeQTL,
matrixcalc,
reticulate
License: `use_mit_license()`, `use_gpl3_license()` or friends to pick a
license
Encoding: UTF-8
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.3.2