Thank you for developing such a fantastic software.
However, I met an error when I ran the "BayesPrism::update.theta" step, I've tried core numbers including 5, 10, 15, and 50, but the error persists. I've verified using parallel::detectCores() that my system has more than 50 available cores. Thank you for your kind reply.
`> bp.res.update <- BayesPrism::update.theta(bp = bp.res.initial, gibbs.control = list(n.cores = 5))
Update the reference matrix ...
Explicit sfStop() is missing: stop now.
Stopping cluster
snowfall 1.84-6.3 initialized (using snow 0.4-4): parallel execution on 50 CPUs.
Stopping cluster
Run Gibbs sampling using updated reference ...
Current time: 2025-06-12 00:25:48.907156
Estimated time to complete: 7hrs 16mins
Estimated finishing time: 2025-06-12 07:41:13.707156
Start run...
snowfall 1.84-6.3 initialized (using snow 0.4-4): parallel execution on 5 CPUs.
Error in checkForRemoteErrors(val) :
5 nodes produced errors; first error: cannot open the connection`
Thank you for developing such a fantastic software.
However, I met an error when I ran the "BayesPrism::update.theta" step, I've tried core numbers including 5, 10, 15, and 50, but the error persists. I've verified using parallel::detectCores() that my system has more than 50 available cores. Thank you for your kind reply.
`> bp.res.update <- BayesPrism::update.theta(bp = bp.res.initial, gibbs.control = list(n.cores = 5))
Update the reference matrix ...
Explicit sfStop() is missing: stop now.
Stopping cluster
snowfall 1.84-6.3 initialized (using snow 0.4-4): parallel execution on 50 CPUs.
Stopping cluster
Run Gibbs sampling using updated reference ...
Current time: 2025-06-12 00:25:48.907156
Estimated time to complete: 7hrs 16mins
Estimated finishing time: 2025-06-12 07:41:13.707156
Start run...
snowfall 1.84-6.3 initialized (using snow 0.4-4): parallel execution on 5 CPUs.
Error in checkForRemoteErrors(val) :
5 nodes produced errors; first error: cannot open the connection`