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IMPORTANT! THIS REPOSITORY IS NO LONGER MAINTAINED BY US SINCE THERE IS A NEW VERSION OF MOONLIGHT - so please refer to https://github.com/ELELAB/Moonlight2R

Cancer Structural Biology Group, Danish Cancer Society Research Center, Strandboulevarden 49, 2100, Copenhagen, Denmark

Cancer Systems Biology, Section of Bioinformatics, Department of Health and Technology, Technical University of Denmark, 2800, Lyngby, Copenhagen

Repository associated to the publication:

Interpreting pathways to discover cancer driver genes with Moonlight. Colaprico A, Olsen C, Bailey MH, Odom GJ, Terkelsen T, Silva TC, Olsen AV, Cantini L, Zinovyev A, Barillot E, Noushmehr H, Bertoli G, Castiglioni I, Cava C, Bontempi G, Chen XS, Papaleo E. Nat Commun. 2020 Jan 3;11(1):69. doi: 10.1038/s41467-019-13803-0., PMID: 31900418

contacts for repository: Elena Papaleo, elpap-at-dtu.dk, elenap-at-cancer.dk; Matteo Tiberti: tiberti-at-cancer.dk

Identify oncogenes and tumor suppressor genes from genomic (gene expression) data.

Installation from Bioconductor

if (!requireNamespace("BiocManager", quietly=TRUE))
    install.packages("BiocManager")
BiocManager::install("MoonlightR")

Installation from GitHub

devtools::install_github(repo = "ibsquare/MoonlightR")