Bump actions/checkout from 4 to 5 (#777)

Bumps [actions/checkout](https://github.com/actions/checkout) from 4 to 5.
- [Release notes](https://github.com/actions/checkout/releases)
- [Changelog](https://github.com/actions/checkout/blob/main/CHANGELOG.md)
- [Commits](actions/checkout@v4...v5)

---
updated-dependencies:
- dependency-name: actions/checkout
  dependency-version: '5'
  dependency-type: direct:production
  update-type: version-update:semver-major
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Co-authored-by: Tom Bland <t.bland@imperial.ac.uk>

Author: dependabot[bot]

.github/workflows/ci.yml

@@ -19,7 +19,7 @@ jobs:
         python-version: ["3.9", "3.13"]
 
     steps:
-      - uses: actions/checkout@v4
+      - uses: actions/checkout@v5
       - name: Set up Python ${{ matrix.python-version }}
         uses: actions/setup-python@v5
         with:
@@ -62,7 +62,7 @@ jobs:
         python-version: ["3.9", "3.13"]
 
     steps:
-      - uses: actions/checkout@v4
+      - uses: actions/checkout@v5
       - name: Set up Python ${{ matrix.python-version }}
         uses: actions/setup-python@v5
         with:

.github/workflows/documentation.yml

@@ -9,7 +9,7 @@ jobs:
   docs:
     runs-on: ubuntu-latest
     steps:
-      - uses: actions/checkout@v4
+      - uses: actions/checkout@v5
       - name: Set up Python
         uses: actions/setup-python@v5
         with:

.github/workflows/pre-commit_autoupdate.yml

@@ -8,7 +8,7 @@ jobs:
   auto-update:
     runs-on: ubuntu-latest
     steps:
-      - uses: actions/checkout@v4
+      - uses: actions/checkout@v5
       - uses: actions/setup-python@v5
       - uses: browniebroke/pre-commit-autoupdate-action@main
       - uses: peter-evans/create-pull-request@v7

.github/workflows/publish.yml

@@ -13,7 +13,7 @@ jobs:
     needs: test
     runs-on: ubuntu-latest
     steps:
-      - uses: actions/checkout@v4
+      - uses: actions/checkout@v5
 
       - name: Build sdist
         run: |
@@ -88,7 +88,7 @@ jobs:
         python-version: ["3.9"]
 
     steps:
-      - uses: actions/checkout@v4
+      - uses: actions/checkout@v5
       - name: Set up Python ${{ matrix.python-version }}
         uses: actions/setup-python@v5
         with:

.github/workflows/regression_tests.yml

@@ -14,7 +14,7 @@ jobs:
         python-version: ["3.9", "3.13"]
 
     steps:
-      - uses: actions/checkout@v4
+      - uses: actions/checkout@v5
       - name: Set up Python ${{ matrix.python-version }}
         uses: actions/setup-python@v5
         with: