Unify MLMC and Bayes

[jbrezmorf]

• PE: Move run_all.sh to bin/endorse-bayes
• JB: separate bin/endorse-setup-mlmc
• PE: separate bin/endorse-setup-bayes
• JB: merge bayes_orig/README.md

===

• PE:
  • create bayes_orig/tests with config.yaml and test_run_all.sh
  • test_run_all: first copy config.yaml file to a given test workdir
  • calls endorse-bayes which takes config.yaml from current dir (or -w WORKDIR parameter)
    other files for calculation will be taken from source relative to endorse-bayes
    see: bin/endorse-mlmc SCRIPTPATH variable for bash script
    see:

Other points for future:

• merge setup scripts
• merge main scripts (a bit problem how to deal with Bayes starting out of PBS, while MLMC starting in PBS)

[Paulie14]

Question:

• should we create SIF image for singularity, so that it is not done every run?
• where to put it (so it can be reused)?
  (currentyl for Bayes, I put in the root dir of Endorse)

[jbrezmorf]

Ahoj, máme od metacentra vytvořený projektový sdílený adresář: /storage/brno12-cerit/projects/flow123d Primární použití je pro automaticky generované obrazy SIF pro singularity. K tomu jsem vytvořil: /storage/brno12-cerit/projects/flow123d/images Dále pro různá sdílená data pro různé projekty (např.sítě z geotermálního výměníku, nebo cache výsledků z endorse), uvidíme. V principu to raději chápejte jako jakousi sdílenou cache, tedy mějte data i někde jinde. Je to vázáno na skupinu uživatelů 'flow123d', kterou spravuju a ve které zatím jsou: brezina, stebel, exner, spetlik. Případní další zájemci (Milane, Jiřino) dejte vědět Zdraví, Honza

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On Sat, 1 Apr 2023 at 23:29, Pavel Exner ***@***.***> wrote: Question: - should we create SIF image for singularity, so that it is not done every run? - where to put it (so it can be reused)? (currentyl for Bayes, I put in the root dir of Endorse) — Reply to this email directly, view it on GitHub <#36 (comment)>, or unsubscribe <https://github.com/notifications/unsubscribe-auth/AACPUPBLOS4FCIXHJVZJUXLW7CM2JANCNFSM6AAAAAAWLUN2LM> . You are receiving this because you authored the thread.Message ID: ***@***.***>