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NAMESPACE
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131 lines (130 loc) · 3.95 KB
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# Generated by roxygen2: do not edit by hand
S3method(print,gompitz.calibration)
S3method(print,gompitz_stratum_calib)
export(.runModuleInDirectory)
export(catHeader)
export(catStructure)
export(checkConvergence)
export(checkInputData)
export(composeGompitzInputData)
export(copyParameters)
export(createExampleFiles)
export(createExampleFilesSmall)
export(createStatusMatrix)
export(default_condition_colours)
export(demo_survival)
export(exampleCalibration)
export(exampleFile)
export(get_label)
export(get_survivals)
export(gg_stacked_bars)
export(interpolate_between)
export(marginal_survival)
export(plot_pipe_conditions)
export(plot_prediction_by_pipe)
export(plot_stacked_bars)
export(plot_survival_curves)
export(printConvergence)
export(readCalibration)
export(readPredictionFile)
export(readPredictionFileWithDataTable)
export(runGompitzCalibration)
export(runGompitzPrediction)
export(runGompredInDirectory)
export(standard_survival)
export(summary_generic_sim)
export(survivals)
export(survivals_original)
export(test_marginal_survival)
export(to_theme_legend)
export(underline)
importFrom(Rcpp,sourceCpp)
importFrom(data.table,fread)
importFrom(data.table,fwrite)
importFrom(ggplot2,aes_string)
importFrom(ggplot2,element_blank)
importFrom(ggplot2,facet_wrap)
importFrom(ggplot2,geom_bar)
importFrom(ggplot2,geom_col)
importFrom(ggplot2,geom_errorbar)
importFrom(ggplot2,geom_line)
importFrom(ggplot2,geom_point)
importFrom(ggplot2,geom_text)
importFrom(ggplot2,ggplot)
importFrom(ggplot2,ggtitle)
importFrom(ggplot2,labs)
importFrom(ggplot2,position_stack)
importFrom(ggplot2,scale_colour_manual)
importFrom(ggplot2,scale_fill_manual)
importFrom(ggplot2,scale_y_continuous)
importFrom(ggplot2,theme)
importFrom(ggplot2,theme_bw)
importFrom(ggplot2,xlab)
importFrom(ggplot2,ylab)
importFrom(grDevices,rainbow)
importFrom(graphics,barplot)
importFrom(graphics,par)
importFrom(graphics,text)
importFrom(kwb.plot,plot_curve_areas_gg)
importFrom(kwb.utils,.OStype)
importFrom(kwb.utils,addClass)
importFrom(kwb.utils,allAreEqual)
importFrom(kwb.utils,almostEqual)
importFrom(kwb.utils,callWith)
importFrom(kwb.utils,catAndRun)
importFrom(kwb.utils,catIf)
importFrom(kwb.utils,catLines)
importFrom(kwb.utils,checkForMissingColumns)
importFrom(kwb.utils,collapsed)
importFrom(kwb.utils,countOrSum)
importFrom(kwb.utils,createDirectory)
importFrom(kwb.utils,createMatrix)
importFrom(kwb.utils,defaultIfNA)
importFrom(kwb.utils,defaultIfNULL)
importFrom(kwb.utils,excludeNULL)
importFrom(kwb.utils,finishAndShowPdfIf)
importFrom(kwb.utils,getAttribute)
importFrom(kwb.utils,hsChrToNum)
importFrom(kwb.utils,hsMatrixToListForm)
importFrom(kwb.utils,hsOpenWindowsExplorer)
importFrom(kwb.utils,hsQuoteChr)
importFrom(kwb.utils,hsRestoreAttributes)
importFrom(kwb.utils,hsTrim)
importFrom(kwb.utils,inRange)
importFrom(kwb.utils,isNaOrEmpty)
importFrom(kwb.utils,limitToRange)
importFrom(kwb.utils,moveColumnsToFront)
importFrom(kwb.utils,moveToFront)
importFrom(kwb.utils,multiSubstitute)
importFrom(kwb.utils,preparePdfIf)
importFrom(kwb.utils,printIf)
importFrom(kwb.utils,rStylePath)
importFrom(kwb.utils,rbindAll)
importFrom(kwb.utils,readDictionary)
importFrom(kwb.utils,removeColumns)
importFrom(kwb.utils,resetRowNames)
importFrom(kwb.utils,resolve)
importFrom(kwb.utils,roundColumns)
importFrom(kwb.utils,runInDirectory)
importFrom(kwb.utils,safePath)
importFrom(kwb.utils,selectColumns)
importFrom(kwb.utils,selectElements)
importFrom(kwb.utils,setMatrixColumns)
importFrom(kwb.utils,stopIfNotMatrix)
importFrom(kwb.utils,stringList)
importFrom(kwb.utils,toFactor)
importFrom(kwb.utils,toNamedList)
importFrom(kwb.utils,underscoreToPercent)
importFrom(kwb.utils,windowsPath)
importFrom(manipulate,checkbox)
importFrom(manipulate,manipulate)
importFrom(manipulate,slider)
importFrom(stats,approx)
importFrom(stats,as.formula)
importFrom(stats,rnorm)
importFrom(stats,setNames)
importFrom(utils,capture.output)
importFrom(utils,read.table)
importFrom(utils,str)
importFrom(utils,unzip)
useDynLib(kwbGompitz, .registration = TRUE)