twinTreeTM/plot_MergedGrains.m at main · MONSTERgroup/twinTreeTM · GitHub

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function plot_MergedGrains(grainsVar, mergedGrains, twinBoundary)
    % Plot twin boundaries and merged grains

    imgSampPath = evalin('base', 'imgSampPath');
    samp_name = evalin('base', 'samp_name');
    methodName = evalin('base', 'methodName');

    phaseName = evalin('base', 'phaseName');
    if length(grainsVar.mineralList) > 1
        grainsVar = grainsVar(phaseName);
    end

    % Twin boundaries over grains
    figure;
    plot(grainsVar, grainsVar.meanOrientation)
    hold on
    plot(twinBoundary, 'linecolor', 'w', 'linewidth', 1, 'displayName', 'twin boundary')
    hold off
    export_fig(char(fullfile(imgSampPath, sprintf('%s_twinsOverGrains_%s.png', samp_name, methodName))), '-m2');
    close

    % Twin boundaries and merged grain boundaries
    figure;
    plot(grainsVar, grainsVar.meanOrientation)
    hold on
    plot(twinBoundary, 'linecolor', 'w', 'linewidth', 2, 'linestyle', '-', ...
        'displayName', 'twin boundary')
    plot(mergedGrains.boundary, 'linecolor', 'k', 'linewidth', 2, 'linestyle', '-', ...
        'displayName', 'merged grains')
    hold off
    export_fig(char(fullfile(imgSampPath, sprintf('%s_twins_mergedGBs_%s.png', samp_name, methodName))), '-m2');
    close
end