Residue numbers of motif

[nicolasrincont]

Dear all. When running the AME pipeline, where can I find the new residue numbers of the amino acids in my input motif?

[nvdreidenbach]

Hi currently the index information is not saved but can be easily added to the evaluate,py process as it’s calculated but not saved. The code does not have an option to save for you downpour have to be added yourself.