diff --git a/.env.example b/.env.example index 6303557..d685c0e 100644 --- a/.env.example +++ b/.env.example @@ -1,14 +1,7 @@ # GitHub GITHUB_TOKEN=ghp_xxxxxxxxxxxxxxxxxxxx -# DuckDB -DUCKDB_PATH=data/warehouse/repolytics.duckdb - # Airflow -AIRFLOW_HOME=orchestration -AIRFLOW__CORE__DAGS_FOLDER=orchestration/dags -AIRFLOW__CORE__LOAD_EXAMPLES=false - -# dbt -DBT_PROJECT_DIR=dbt -DBT_PROFILES_DIR=dbt +AIRFLOW_UID=50000 +# Generate: uv run python -c "from cryptography.fernet import Fernet; print(Fernet.generate_key().decode())" +FERNET_KEY=secret diff --git a/.gitignore b/.gitignore index 1b5f2ce..da2435e 100644 --- a/.gitignore +++ b/.gitignore @@ -26,19 +26,17 @@ data/ *.duckdb *.duckdb.wal -# dlt (local config/secrets + pipeline working dir) -.dlt/ - -# Logs -logs/ -orchestration/logs/ +# Airflow +config/airflow.cfg # dbt dbt/target/ dbt/dbt_packages/ -dbt/logs/ dbt/.user.yml +# Logs +logs/ + # OS / editor .DS_Store Thumbs.db diff --git a/Dockerfile b/Dockerfile new file mode 100644 index 0000000..4146d93 --- /dev/null +++ b/Dockerfile @@ -0,0 +1,29 @@ +# Custom Airflow image: extends the official image with Cosmos + dbt, installed +# from uv.lock so the runtime matches the local .venv. + +FROM apache/airflow:3.2.2-python3.13 + +COPY --from=ghcr.io/astral-sh/uv:0.11.23 /uv /uvx /bin/ + +ENV UV_LINK_MODE=copy + +# Install as root: the system site-packages (/usr/python) is root-owned +USER root + +# Resolve the orchestration + dbt groups from the lockfile and install them into +# the image's system Python. --no-emit-package apache-airflow excludes the meta +# package so the base image's Airflow is left untouched. +COPY pyproject.toml uv.lock /tmp/build/ +RUN uv export --frozen --no-emit-project --no-hashes \ + --directory /tmp/build \ + --no-emit-package apache-airflow \ + --group orchestration --group dbt \ + | uv pip install --system --no-cache -r - \ + && rm -rf /tmp/build + +# Install the repolytics package, --no-deps because deps already installed above. +COPY --chown=airflow:0 pyproject.toml uv.lock README.md /opt/airflow/project/ +COPY --chown=airflow:0 src /opt/airflow/project/src +RUN uv pip install --system --no-cache --no-deps -e /opt/airflow/project + +USER airflow diff --git a/Taskfile.yml b/Taskfile.yml index 92d7ade..3172d4b 100644 --- a/Taskfile.yml +++ b/Taskfile.yml @@ -84,6 +84,12 @@ tasks: cmds: - uv run --group dbt dbt compile --target ci + dbt:manifest: + desc: Generate target/manifest.json for Cosmos (DBT_MANIFEST load mode) + dir: dbt + cmds: + - uv run --group dbt dbt parse + dbt:run: desc: Run dbt models dir: dbt @@ -108,3 +114,10 @@ tasks: cmds: - uv run --group dbt dbt docs generate - uv run --group dbt dbt docs serve + + # ----- Airflow ----- + airflow:build: + desc: Build the custom Airflow image + deps: [dbt:manifest] + cmds: + - docker compose build diff --git a/dags/repolytics_daily.py b/dags/repolytics_daily.py new file mode 100644 index 0000000..f9f273f --- /dev/null +++ b/dags/repolytics_daily.py @@ -0,0 +1,66 @@ +"""Daily Repolytics pipeline: dlt ingestion -> dbt transform. + +Ingestion lands GitHub + PyPI into the DuckDB ``raw`` schema in a single atomic +dlt load. Cosmos renders the dbt project, ``max_active_tasks=1`` serializes everything +so the dbt model tasks never open the single-writer DuckDB file concurrently. +""" + +import os +from datetime import timedelta +from pathlib import Path + +from airflow.sdk import dag, task +from cosmos import ( + DbtTaskGroup, + LoadMode, + ProfileConfig, + ProjectConfig, + RenderConfig, +) + +# Location of the dbt project inside the container +DBT_PROJECT_DIR = Path(os.environ.get("DBT_PROJECT_DIR", "/opt/airflow/dbt")) + +profile_config = ProfileConfig( + profile_name="repolytics", + target_name="dev", + profiles_yml_filepath=DBT_PROJECT_DIR / "profiles.yml", +) + + +@dag( + dag_id="repolytics_daily", + schedule="@daily", + catchup=False, + max_active_tasks=1, # DuckDB is single-writer: never run two dbt tasks at once. + default_args={"retries": 2, "retry_delay": timedelta(minutes=5)}, + tags=["repolytics", "elt"], +) +def repolytics_daily(): + @task + def ingest() -> None: + """Run the dlt pipeline (GitHub + PyPI) into the DuckDB ``raw`` dataset.""" + from repolytics.ingestion.pipeline import run + + run() + + transform = DbtTaskGroup( + group_id="transform", + project_config=ProjectConfig( + dbt_project_path=DBT_PROJECT_DIR, + # Render the graph from a pre-built manifest. + manifest_path=DBT_PROJECT_DIR / "target" / "manifest.json", + ), + profile_config=profile_config, + render_config=RenderConfig( + load_method=LoadMode.DBT_MANIFEST, + # Detach tests that depend on multiple models into their own + # tasks scheduled after all parents are built. + should_detach_multiple_parents_tests=True, + ), + ) + + ingest() >> transform + + +repolytics_daily() diff --git a/dbt/dbt_project.yml b/dbt/dbt_project.yml index 36f443f..035459f 100644 --- a/dbt/dbt_project.yml +++ b/dbt/dbt_project.yml @@ -29,6 +29,10 @@ models: +materialized: table +schema: marts +seeds: + repolytics: + +schema: staging + snapshots: repolytics: +schema: snapshots diff --git a/dbt/models/marts/dim_dates.sql b/dbt/models/marts/dim_dates.sql index f73f5f0..ebbb05c 100644 --- a/dbt/models/marts/dim_dates.sql +++ b/dbt/models/marts/dim_dates.sql @@ -2,7 +2,7 @@ with spine as ( {{ dbt_utils.date_spine( datepart="day", - start_date="cast('2020-01-01' as date)", + start_date="cast('2000-01-01' as date)", end_date="cast('2031-01-01' as date)" ) }} diff --git a/dbt/seeds/projects.csv b/dbt/seeds/projects.csv index 73991f0..91a9020 100644 --- a/dbt/seeds/projects.csv +++ b/dbt/seeds/projects.csv @@ -1,6 +1,3 @@ repo,package fastapi/fastapi,fastapi pydantic/pydantic,pydantic -pola-rs/polars,polars -duckdb/duckdb,duckdb -encode/httpx,httpx diff --git a/docker-compose.yaml b/docker-compose.yaml new file mode 100644 index 0000000..f3c2a03 --- /dev/null +++ b/docker-compose.yaml @@ -0,0 +1,285 @@ +# Licensed to the Apache Software Foundation (ASF) under one +# or more contributor license agreements. See the NOTICE file +# distributed with this work for additional information +# regarding copyright ownership. The ASF licenses this file +# to you under the Apache License, Version 2.0 (the +# "License"); you may not use this file except in compliance +# with the License. You may obtain a copy of the License at +# +# http://www.apache.org/licenses/LICENSE-2.0 +# +# Unless required by applicable law or agreed to in writing, +# software distributed under the License is distributed on an +# "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY +# KIND, either express or implied. See the License for the +# specific language governing permissions and limitations +# under the License. +# + +# Airflow configuration for LocalExecutor with PostgreSQL (DuckDB is single-writer, +# so distributed Celery workers are intentionally not used here). +# +# WARNING: This configuration is for local development. Do not use it in a production deployment. +# +# This configuration supports basic configuration using environment variables or an .env file +# The following variables are supported: +# +# AIRFLOW_IMAGE_NAME - Docker image name used to run Airflow. +# Default: apache/airflow:3.2.2 +# AIRFLOW_UID - User ID in Airflow containers +# Default: 50000 +# AIRFLOW_PROJ_DIR - Base path to which all the files will be volumed. +# Default: . +# Those configurations are useful mostly in case of standalone testing/running Airflow in test/try-out mode +# +# _AIRFLOW_WWW_USER_USERNAME - Username for the administrator account (if requested). +# Default: airflow +# _AIRFLOW_WWW_USER_PASSWORD - Password for the administrator account (if requested). +# Default: airflow +# _PIP_ADDITIONAL_REQUIREMENTS - Additional PIP requirements to add when starting all containers. +# Use this option ONLY for quick checks. Installing requirements at container +# startup is done EVERY TIME the service is started. +# A better way is to build a custom image or extend the official image +# as described in https://airflow.apache.org/docs/docker-stack/build.html. +# Default: '' +# +# Feel free to modify this file to suit your needs. +--- +x-airflow-common: + &airflow-common + # In order to add custom dependencies or upgrade provider distributions you can use your extended image. + # Comment the image line, place your Dockerfile in the directory where you placed the docker-compose.yaml + # and uncomment the "build" line below, Then run `docker-compose build` to build the images. + # image: ${AIRFLOW_IMAGE_NAME:-apache/airflow:3.2.2} + build: . + env_file: + - ${ENV_FILE_PATH:-.env} + environment: + &airflow-common-env + AIRFLOW__CORE__EXECUTOR: LocalExecutor + AIRFLOW__CORE__AUTH_MANAGER: airflow.providers.fab.auth_manager.fab_auth_manager.FabAuthManager + AIRFLOW__DATABASE__SQL_ALCHEMY_CONN: postgresql+psycopg2://airflow:airflow@postgres/airflow + AIRFLOW__CORE__FERNET_KEY: ${FERNET_KEY} + AIRFLOW__CORE__DAGS_ARE_PAUSED_AT_CREATION: 'true' + AIRFLOW__CORE__LOAD_EXAMPLES: 'false' + AIRFLOW__CORE__EXECUTION_API_SERVER_URL: 'http://airflow-apiserver:8080/execution/' + AIRFLOW__API_AUTH__JWT_SECRET: ${AIRFLOW__API_AUTH__JWT_SECRET:-airflow_jwt_secret} + AIRFLOW__API_AUTH__JWT_ISSUER: ${AIRFLOW__API_AUTH__JWT_ISSUER:-airflow} + # yamllint disable rule:line-length + # Use simple http server on scheduler for health checks + # See https://airflow.apache.org/docs/apache-airflow/stable/administration-and-deployment/logging-monitoring/check-health.html#scheduler-health-check-server + # yamllint enable rule:line-length + AIRFLOW__SCHEDULER__ENABLE_HEALTH_CHECK: 'true' + # WARNING: Use _PIP_ADDITIONAL_REQUIREMENTS option ONLY for a quick checks + # for other purpose (development, test and especially production usage) build/extend Airflow image. + _PIP_ADDITIONAL_REQUIREMENTS: ${_PIP_ADDITIONAL_REQUIREMENTS:-} + # The following line can be used to set a custom config file, stored in the local config folder + AIRFLOW_CONFIG: '/opt/airflow/config/airflow.cfg' + # DuckDB warehouse path + DUCKDB_PATH: /opt/airflow/data/warehouse/repolytics.duckdb + # dbt project path + DBT_PROJECT_DIR: /opt/airflow/dbt + volumes: + - ${AIRFLOW_PROJ_DIR:-.}/dags:/opt/airflow/dags + - ${AIRFLOW_PROJ_DIR:-.}/logs:/opt/airflow/logs + - ${AIRFLOW_PROJ_DIR:-.}/config:/opt/airflow/config + - ${AIRFLOW_PROJ_DIR:-.}/plugins:/opt/airflow/plugins + # dbt project (Cosmos reads dbt_project.yml + profiles.yml at parse time) + - ${AIRFLOW_PROJ_DIR:-.}/dbt:/opt/airflow/dbt + # Warehouse data + - ${AIRFLOW_PROJ_DIR:-.}/data:/opt/airflow/data + # repolytics package source (src-layout) + - ${AIRFLOW_PROJ_DIR:-.}/src:/opt/airflow/project/src + user: "${AIRFLOW_UID:-50000}:0" + depends_on: + &airflow-common-depends-on + postgres: + condition: service_healthy + +services: + postgres: + image: postgres:16 + environment: + POSTGRES_USER: airflow + POSTGRES_PASSWORD: airflow + POSTGRES_DB: airflow + volumes: + - postgres-db-volume:/var/lib/postgresql/data + healthcheck: + test: ["CMD", "pg_isready", "-U", "airflow"] + interval: 10s + retries: 5 + start_period: 5s + restart: always + + airflow-apiserver: + <<: *airflow-common + command: api-server + ports: + - "8080:8080" + healthcheck: + test: ["CMD", "curl", "--fail", "http://localhost:8080/api/v2/monitor/health"] + interval: 30s + timeout: 10s + retries: 5 + start_period: 30s + restart: always + depends_on: + <<: *airflow-common-depends-on + airflow-init: + condition: service_completed_successfully + + airflow-scheduler: + <<: *airflow-common + command: scheduler + healthcheck: + test: ["CMD", "curl", "--fail", "http://localhost:8974/health"] + interval: 30s + timeout: 10s + retries: 5 + start_period: 30s + restart: always + depends_on: + <<: *airflow-common-depends-on + airflow-init: + condition: service_completed_successfully + + airflow-dag-processor: + <<: *airflow-common + command: dag-processor + healthcheck: + test: ["CMD-SHELL", 'airflow jobs check --job-type DagProcessorJob --hostname "$${HOSTNAME}"'] + interval: 30s + timeout: 10s + retries: 5 + start_period: 30s + restart: always + depends_on: + <<: *airflow-common-depends-on + airflow-init: + condition: service_completed_successfully + + airflow-triggerer: + <<: *airflow-common + command: triggerer + healthcheck: + test: ["CMD-SHELL", 'airflow jobs check --job-type TriggererJob --hostname "$${HOSTNAME}"'] + interval: 30s + timeout: 10s + retries: 5 + start_period: 30s + restart: always + depends_on: + <<: *airflow-common-depends-on + airflow-init: + condition: service_completed_successfully + + airflow-init: + <<: *airflow-common + entrypoint: /bin/bash + # yamllint disable rule:line-length + command: + - -c + - | + if [[ -z "${AIRFLOW_UID}" ]]; then + echo + echo -e "\033[1;33mWARNING!!!: AIRFLOW_UID not set!\e[0m" + echo "If you are on Linux, you SHOULD follow the instructions below to set " + echo "AIRFLOW_UID environment variable, otherwise files will be owned by root." + echo "For other operating systems you can get rid of the warning with manually created .env file:" + echo " See: https://airflow.apache.org/docs/apache-airflow/stable/howto/docker-compose/index.html#setting-the-right-airflow-user" + echo + export AIRFLOW_UID=$$(id -u) + fi + one_meg=1048576 + mem_available=$$(($$(getconf _PHYS_PAGES) * $$(getconf PAGE_SIZE) / one_meg)) + cpus_available=$$(grep -cE 'cpu[0-9]+' /proc/stat) + disk_available=$$(df / | tail -1 | awk '{print $$4}') + warning_resources="false" + if (( mem_available < 4000 )) ; then + echo + echo -e "\033[1;33mWARNING!!!: Not enough memory available for Docker.\e[0m" + echo "At least 4GB of memory required. You have $$(numfmt --to iec $$((mem_available * one_meg)))" + echo + warning_resources="true" + fi + if (( cpus_available < 2 )); then + echo + echo -e "\033[1;33mWARNING!!!: Not enough CPUS available for Docker.\e[0m" + echo "At least 2 CPUs recommended. You have $${cpus_available}" + echo + warning_resources="true" + fi + if (( disk_available < one_meg * 10 )); then + echo + echo -e "\033[1;33mWARNING!!!: Not enough Disk space available for Docker.\e[0m" + echo "At least 10 GBs recommended. You have $$(numfmt --to iec $$((disk_available * 1024 )))" + echo + warning_resources="true" + fi + if [[ $${warning_resources} == "true" ]]; then + echo + echo -e "\033[1;33mWARNING!!!: You have not enough resources to run Airflow (see above)!\e[0m" + echo "Please follow the instructions to increase amount of resources available:" + echo " https://airflow.apache.org/docs/apache-airflow/stable/howto/docker-compose/index.html#before-you-begin" + echo + fi + echo + echo "Creating missing opt dirs if missing:" + echo + mkdir -v -p /opt/airflow/{logs,dags,plugins,config} + echo + echo "Airflow version:" + /entrypoint airflow version + echo + echo "Files in shared volumes:" + echo + ls -la /opt/airflow/{logs,dags,plugins,config} + echo + echo "Running airflow config list to create default config file if missing." + echo + /entrypoint airflow config list >/dev/null + echo + echo "Files in shared volumes:" + echo + ls -la /opt/airflow/{logs,dags,plugins,config} + echo + echo "Change ownership of files in /opt/airflow to ${AIRFLOW_UID}:0" + echo + chown -R "${AIRFLOW_UID}:0" /opt/airflow/ + echo + echo "Change ownership of files in shared volumes to ${AIRFLOW_UID}:0" + echo + chown -v -R "${AIRFLOW_UID}:0" /opt/airflow/{logs,dags,plugins,config} + echo + echo "Files in shared volumes:" + echo + ls -la /opt/airflow/{logs,dags,plugins,config} + + # yamllint enable rule:line-length + environment: + <<: *airflow-common-env + _AIRFLOW_DB_MIGRATE: 'true' + _AIRFLOW_WWW_USER_CREATE: 'true' + _AIRFLOW_WWW_USER_USERNAME: ${_AIRFLOW_WWW_USER_USERNAME:-airflow} + _AIRFLOW_WWW_USER_PASSWORD: ${_AIRFLOW_WWW_USER_PASSWORD:-airflow} + _PIP_ADDITIONAL_REQUIREMENTS: '' + user: "0:0" + + airflow-cli: + <<: *airflow-common + profiles: + - debug + environment: + <<: *airflow-common-env + CONNECTION_CHECK_MAX_COUNT: "0" + # Workaround for entrypoint issue. See: https://github.com/apache/airflow/issues/16252 + command: + - bash + - -c + - airflow + depends_on: + <<: *airflow-common-depends-on + +volumes: + postgres-db-volume: diff --git a/orchestration/dags/.gitkeep b/orchestration/dags/.gitkeep deleted file mode 100644 index e69de29..0000000 diff --git a/pyproject.toml b/pyproject.toml index c8f9ea4..aa3b455 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -15,6 +15,9 @@ dbt = [ "dbt-core>=1.11.11", "dbt-duckdb>=1.10.1", ] +orchestration = [ + "astronomer-cosmos>=1.14.2", +] dev = [ "pytest>=9.1.0", "pytest-cov>=7.1.0", diff --git a/uv.lock b/uv.lock index 5a70911..6f12716 100644 --- a/uv.lock +++ b/uv.lock @@ -8,6 +8,24 @@ resolution-markers = [ "(python_full_version < '3.14' and platform_python_implementation == 'PyPy') or (python_full_version < '3.14' and sys_platform == 'emscripten')", ] +[[package]] +name = "a2wsgi" +version = "1.10.10" +source = { registry = "https://pypi.org/simple" } +sdist = { url = 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