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Refactor: use .lintr defaults #504

@AlexAxthelm

Description

@AlexAxthelm

In #502, we added the repo-level .lintr file, which disables linters for files which would otherwise fail.

This issue is to refactor the code such that we can reenable those linters.

relates to RMI-PACTA/r2dii.match#487

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