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Copy pathtest-data.json
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57 lines (57 loc) · 1.95 KB
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{
"samples": [
{
"latitude": -25.7479,
"longitude": 28.2293,
"water_temperature": 24.5,
"ph": 7.2,
"tds": 98.5,
"do": 8.2,
"sample_analysis_type": "Metagenomic",
"isolation_source": "River water",
"collection_date": "2025-11-15",
"location_name": "University of Pretoria",
"collected_by": "Saskia Steyn",
"predicted_sir_profile": "Susceptible",
"metagenomic": [
{
"sequence_name": "sample_001_seq_1",
"element_type": "transposon",
"class": "Class A",
"subclass": "Serine carbapenemase",
"amr_resistance_genes": ["ampC", "blaTEM"]
},
{
"sequence_name": "sample_001_seq_2",
"element_type": "insertion_sequence",
"class": "Class C",
"subclass": "Cephalosporinase",
"amr_resistance_genes": ["cephalosporinase"]
}
]
},
{
"latitude": -25.75,
"longitude": 28.231,
"water_temperature": 23.8,
"ph": 6.9,
"tds": 105.0,
"do": 7.5,
"sample_analysis_type": "Metagenomic",
"isolation_source": "Dam",
"collection_date": "2025-11-16",
"location_name": "Pretoria River",
"collected_by": "Saskia Steyn",
"predicted_sir_profile": "Intermediate",
"metagenomic": [
{
"sequence_name": "sample_002_seq_1",
"element_type": "plasmid",
"class": "Class B",
"subclass": "Metallo-beta-lactamase",
"amr_resistance_genes": ["blaVIM", "blaIMP"]
}
]
}
]
}