From 3bb0bf505f0642dd9c715aad0749a294930e6943 Mon Sep 17 00:00:00 2001
From: skulidropek <66840575+skulidropek@users.noreply.github.com>
Date: Wed, 25 Mar 2026 21:07:17 +0000
Subject: [PATCH 1/2] fix(deploy): remove stale checkout files before extract

---
 scripts/deploy-prod.sh | 1 +
 1 file changed, 1 insertion(+)

diff --git a/scripts/deploy-prod.sh b/scripts/deploy-prod.sh
index cdd2d62..d5c9651 100644
--- a/scripts/deploy-prod.sh
+++ b/scripts/deploy-prod.sh
@@ -93,6 +93,7 @@ eval "$SSH 'mkdir -p $TARGET_DIR/data/state $TARGET_DIR/knowledge'"
 eval "$SCP '$TMP_ARCHIVE' $SSH_USER@$SSH_HOST:$TARGET_DIR/release.tar.gz"
 eval "$SCP '$TMP_ENV' $SSH_USER@$SSH_HOST:$TARGET_DIR/.env"
 eval "$SSH 'chmod 0600 $TARGET_DIR/.env'"
+eval "$SSH 'find $TARGET_DIR -mindepth 1 -maxdepth 1 ! -name data ! -name .env ! -name release.tar.gz ! -name .deploy-revision -exec rm -rf {} +'"
 eval "$SSH 'cd $TARGET_DIR && tar -xzf release.tar.gz && rm -f release.tar.gz'"
 {
   printf '%s\n' "$BUNDLE_REV"

From 6188613fc76eb091154b6c205eb9f50a8d01f1f3 Mon Sep 17 00:00:00 2001
From: skulidropek <66840575+skulidropek@users.noreply.github.com>
Date: Wed, 25 Mar 2026 21:08:00 +0000
Subject: [PATCH 2/2] fix(deploy): clean stale checkout files on VPS

---
 scripts/deploy-prod.sh | 1 +
 1 file changed, 1 insertion(+)

diff --git a/scripts/deploy-prod.sh b/scripts/deploy-prod.sh
index d5c9651..c927254 100644
--- a/scripts/deploy-prod.sh
+++ b/scripts/deploy-prod.sh
@@ -93,6 +93,7 @@ eval "$SSH 'mkdir -p $TARGET_DIR/data/state $TARGET_DIR/knowledge'"
 eval "$SCP '$TMP_ARCHIVE' $SSH_USER@$SSH_HOST:$TARGET_DIR/release.tar.gz"
 eval "$SCP '$TMP_ENV' $SSH_USER@$SSH_HOST:$TARGET_DIR/.env"
 eval "$SSH 'chmod 0600 $TARGET_DIR/.env'"
+# Clean the old checkout before extracting the new bundle so deleted repo files do not survive on the VPS.
 eval "$SSH 'find $TARGET_DIR -mindepth 1 -maxdepth 1 ! -name data ! -name .env ! -name release.tar.gz ! -name .deploy-revision -exec rm -rf {} +'"
 eval "$SSH 'cd $TARGET_DIR && tar -xzf release.tar.gz && rm -f release.tar.gz'"
 {