run_qsiprep.sh: Used to preprocess reconstructed diffusion data in BIDS format.
run_qsiprep_reconstruction_dsi.sh: Used to reconstruct preprocessed outputs using QSiPrep DSI Studio workflow.
run_qsiprep_reconstruction_msmt.sh: Used to reconstruct preprocessed outputs using QSiPrep MRtrix3 multishell multi-tissue workflow.
run_TractSeg.sh: Used to perform tractography on reconstructed outputs using TractSeg