From a2bf2b5618317e78d533a97a55f687ce1e69857b Mon Sep 17 00:00:00 2001 From: David Simon Date: Mon, 18 Nov 2024 20:14:06 +1300 Subject: [PATCH 1/2] Update PDB download link --- scripts/download_pdb_mmcif.sh | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/scripts/download_pdb_mmcif.sh b/scripts/download_pdb_mmcif.sh index 051bf8d4b..b0754f745 100755 --- a/scripts/download_pdb_mmcif.sh +++ b/scripts/download_pdb_mmcif.sh @@ -58,4 +58,4 @@ done # Delete empty download directory structure. find "${RAW_DIR}" -type d -empty -delete -aria2c "ftp://ftp.wwpdb.org/pub/pdb/data/status/obsolete.dat" --dir="${ROOT_DIR}" +aria2c "https://files.wwpdb.org/pub/pdb/data/status/obsolete.dat" --dir="${ROOT_DIR}" From 868c5a147778695fd6660e249a2f7a84c0da3e62 Mon Sep 17 00:00:00 2001 From: David Simon Date: Wed, 20 Nov 2024 09:07:26 +1300 Subject: [PATCH 2/2] Update PDB download link --- scripts/download_pdb_seqres.sh | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/scripts/download_pdb_seqres.sh b/scripts/download_pdb_seqres.sh index 5e42b5ddb..bef1a9ce9 100755 --- a/scripts/download_pdb_seqres.sh +++ b/scripts/download_pdb_seqres.sh @@ -31,7 +31,7 @@ fi DOWNLOAD_DIR="$1" ROOT_DIR="${DOWNLOAD_DIR}/pdb_seqres" -SOURCE_URL="ftp://ftp.wwpdb.org/pub/pdb/derived_data/pdb_seqres.txt" +SOURCE_URL="https://files.wwpdb.org/pub/pdb/derived_data/pdb_seqres.txt" BASENAME=$(basename "${SOURCE_URL}") mkdir --parents "${ROOT_DIR}"