From 5929fbc20ee712a8ffbe64de30c1d386ca15082a Mon Sep 17 00:00:00 2001 From: Christoffer Heckman Date: Fri, 23 Jan 2026 15:08:38 -0700 Subject: [PATCH 01/38] Staging (#29) * Enhance audit pages with textbook-style layout - Add left sidebar with chapter navigation - Add right sidebar for table of contents - Use AuditLayout component to match textbook styling - Improves visual consistency across the site * Add FAQ section to Paper Audit assignment Integrate comprehensive FAQ covering: - Scope and technical focus (primary paper, interface auditing) - Format and objectives (argue vs summarize, Amazon Principle) - Presentation logistics (audit vs presentation, time allocation) Students now have clear guidance on what the audit should accomplish and how it differs from a traditional paper summary. * Fix staging deployment SSH timeout issue - Add stdin redirect (< /dev/null) to properly detach nohup - Add sleep before starting new server to ensure old process is killed - Remove PID echo that could cause hanging This should prevent the SSH action from being terminated with SIGTERM. * Fix PR preview paths for different content types - Detect whether PR contains audit or contributor profile - Generate correct preview URL based on content type - Show appropriate checklist (audit vs contributor) - Extract actual filename for accurate path Fixes incorrect preview URLs for contributor profile PRs like #25. * Fix content type detection in PR preview workflow - Fetch base branch explicitly for git diff - Store FILES output to avoid repeated git diff calls - Use fetch-depth: 0 to ensure full git history available This should properly detect contributor vs audit files. * Add contributor profile: Gyanig Kumar (#25) Co-authored-by: Christoffer Heckman * Fix SSH timeout with setsid and explicit exit - Use setsid instead of nohup for better process daemonization - Add explicit exit 0 after starting background process - Move success message before starting background job - Increase sleep to 2s to ensure pkill completes This should prevent the SSH session from hanging and getting terminated. * Add debug output to staging deployment script * Split deployment into two SSH sessions Separate static site deployment from API server startup to avoid SSH timeout. Each SSH session is now shorter and focused on a single task. * Remove unused API server from staging deployment The API server was for a comments/review system that is not currently implemented. Removing it fixes the SSH timeout issue. * Remove unused API server infrastructure The comments/review system was never fully implemented. The frontend components (CommentSidebar, API routes) don't exist and the system is incompatible with static export mode. * Support audits in both staging and production directories Some students may mistakenly place audits in content/textbook/audits/ instead of content/textbook/audits/staging/. Detect both locations. * Update Scratch-1 due date to February 1 * Add contributor profile: Thanushraam Suresh Kumar (#28) --------- Co-authored-by: Gyanig Kumar Co-authored-by: Thanushraam <45840572+Tr0612@users.noreply.github.com> --- .github/workflows/vla-audit.yml | 5 + api-server/.htaccess | 5 - api-server/package.json | 13 -- api-server/server.js | 148 ----------------------- content/contributors/tr0612.mdx | 27 +++++ content/course/assignments/scratch-1.mdx | 6 +- 6 files changed, 35 insertions(+), 169 deletions(-) delete mode 100644 api-server/.htaccess delete mode 100644 api-server/package.json delete mode 100644 api-server/server.js create mode 100644 content/contributors/tr0612.mdx diff --git a/.github/workflows/vla-audit.yml b/.github/workflows/vla-audit.yml index ba8ee422..804c8b20 100644 --- a/.github/workflows/vla-audit.yml +++ b/.github/workflows/vla-audit.yml @@ -101,6 +101,11 @@ jobs: # Extract the audit filename AUDIT_FILE=$(echo "$FILES" | grep "content/textbook/audits/staging/" | head -1 | xargs basename | sed 's/\.mdx$//') echo "slug=textbook/audits/staging/${AUDIT_FILE}" >> $GITHUB_OUTPUT + elif echo "$FILES" | grep -q "content/textbook/audits/.*\.mdx"; then + echo "type=audit" >> $GITHUB_OUTPUT + # Extract the audit filename (production location) + AUDIT_FILE=$(echo "$FILES" | grep "content/textbook/audits/.*\.mdx" | grep -v "staging/" | head -1 | xargs basename | sed 's/\.mdx$//') + echo "slug=textbook/audits/${AUDIT_FILE}" >> $GITHUB_OUTPUT elif echo "$FILES" | grep -q "content/contributors/"; then echo "type=contributor" >> $GITHUB_OUTPUT # Extract the contributor filename diff --git a/api-server/.htaccess b/api-server/.htaccess deleted file mode 100644 index 7b2b1da6..00000000 --- a/api-server/.htaccess +++ /dev/null @@ -1,5 +0,0 @@ -# Proxy API requests to Node.js server -# Place this in /var/www/vlm-robotics.dev/public_html/api/.htaccess - -RewriteEngine On -RewriteRule ^(.*)$ http://localhost:3001/api/$1 [P,L] diff --git a/api-server/package.json b/api-server/package.json deleted file mode 100644 index 4557052c..00000000 --- a/api-server/package.json +++ /dev/null @@ -1,13 +0,0 @@ -{ - "name": "vla-comments-api", - "version": "1.0.0", - "type": "module", - "main": "server.js", - "scripts": { - "start": "node server.js" - }, - "dependencies": { - "express": "^4.18.2", - "cors": "^2.8.5" - } -} diff --git a/api-server/server.js b/api-server/server.js deleted file mode 100644 index 5b07f5d4..00000000 --- a/api-server/server.js +++ /dev/null @@ -1,148 +0,0 @@ -import express from 'express'; -import cors from 'cors'; -import fs from 'fs'; -import path from 'path'; -import { fileURLToPath } from 'url'; -import { randomUUID } from 'crypto'; - -const __filename = fileURLToPath(import.meta.url); -const __dirname = path.dirname(__filename); - -const app = express(); -const PORT = process.env.PORT || 3001; - -// Middleware -app.use(cors()); -app.use(express.json()); - -// Comments directory -const commentsDir = path.join(__dirname, '..', 'database', 'comments'); - -// Ensure comments directory exists -if (!fs.existsSync(commentsDir)) { - fs.mkdirSync(commentsDir, { recursive: true }); -} - -function getCommentFilePath(prNumber) { - return path.join(commentsDir, `${prNumber}.json`); -} - -function readComments(prNumber) { - const filePath = getCommentFilePath(prNumber); - - if (!fs.existsSync(filePath)) { - return { - prNumber: parseInt(prNumber), - comments: [], - }; - } - - try { - const data = fs.readFileSync(filePath, 'utf8'); - return JSON.parse(data); - } catch (error) { - console.error('Error reading comments:', error); - return { - prNumber: parseInt(prNumber), - comments: [], - }; - } -} - -function writeComments(prNumber, data) { - const filePath = getCommentFilePath(prNumber); - fs.writeFileSync(filePath, JSON.stringify(data, null, 2), 'utf8'); -} - -// GET /api/comments/:prNumber -app.get('/api/comments/:prNumber', (req, res) => { - const { prNumber } = req.params; - const data = readComments(prNumber); - res.json(data); -}); - -// POST /api/comments/:prNumber -app.post('/api/comments/:prNumber', (req, res) => { - try { - const { prNumber } = req.params; - const { sectionId, text } = req.body; - - if (!sectionId || !text) { - return res.status(400).json({ error: 'sectionId and text are required' }); - } - - const data = readComments(prNumber); - - const newComment = { - id: randomUUID(), - sectionId, - text, - author: 'instructor', - timestamp: new Date().toISOString(), - resolved: false, - }; - - data.comments.push(newComment); - writeComments(prNumber, data); - - res.status(201).json(newComment); - } catch (error) { - console.error('Error creating comment:', error); - res.status(500).json({ error: 'Failed to create comment' }); - } -}); - -// PUT /api/comments/:prNumber/:commentId -app.put('/api/comments/:prNumber/:commentId', (req, res) => { - try { - const { prNumber, commentId } = req.params; - const { text, resolved } = req.body; - - const data = readComments(prNumber); - const commentIndex = data.comments.findIndex(c => c.id === commentId); - - if (commentIndex === -1) { - return res.status(404).json({ error: 'Comment not found' }); - } - - if (text !== undefined) { - data.comments[commentIndex].text = text; - } - if (resolved !== undefined) { - data.comments[commentIndex].resolved = resolved; - } - - writeComments(prNumber, data); - - res.json(data.comments[commentIndex]); - } catch (error) { - console.error('Error updating comment:', error); - res.status(500).json({ error: 'Failed to update comment' }); - } -}); - -// DELETE /api/comments/:prNumber/:commentId -app.delete('/api/comments/:prNumber/:commentId', (req, res) => { - try { - const { prNumber, commentId } = req.params; - const data = readComments(prNumber); - - data.comments = data.comments.filter(c => c.id !== commentId); - writeComments(prNumber, data); - - res.json({ success: true }); - } catch (error) { - console.error('Error deleting comment:', error); - res.status(500).json({ error: 'Failed to delete comment' }); - } -}); - -// Health check -app.get('/health', (req, res) => { - res.json({ status: 'ok', timestamp: new Date().toISOString() }); -}); - -app.listen(PORT, () => { - console.log(`VLA Comments API server running on port ${PORT}`); - console.log(`Comments directory: ${commentsDir}`); -}); diff --git a/content/contributors/tr0612.mdx b/content/contributors/tr0612.mdx new file mode 100644 index 00000000..cc55e687 --- /dev/null +++ b/content/contributors/tr0612.mdx @@ -0,0 +1,27 @@ +--- +name: "Thanushraam Suresh Kumar" +role: "Student" +semester: "Spring 2026" +github: "tr0612" +--- + +# About Me + +I’m a second-year Master’s student in Robotics at CU Boulder. My research interests focus on perception for autonomous systems. I’m currently working in the PRAISE Lab under Dr. Singh, developing optical flow models for edge devices. + +## Academic Background + +- **University**: University of Colorado Boulder +- **Major**: Robotics +- **Year**: 2nd year Masters. + +## Research Interests + +- Computer Vision +- Reinforcement learning +- VLA + +## Contact + +- **Email**: thanushraam.sureshkumar@colorado.edu +- **GitHub**: [@tr0612](https://github.com/tr0612) \ No newline at end of file diff --git a/content/course/assignments/scratch-1.mdx b/content/course/assignments/scratch-1.mdx index 9231f1f0..2b1f2bce 100644 --- a/content/course/assignments/scratch-1.mdx +++ b/content/course/assignments/scratch-1.mdx @@ -1,7 +1,7 @@ --- title: 'Scratch-1: The Transformer Backbone' assignment: 4 -due: 'Tuesday, January 27, 9:00 AM MST' +due: 'Sunday, February 1, 9:00 AM MST' points: 100 --- @@ -146,7 +146,7 @@ Create an MDX page at `content/course/submissions/scratch-1/[your-name].mdx` wit --- title: "Scratch-1 Submission: Your Name" student: "Your Name" -date: "2026-01-27" +date: "2026-02-01" --- # Scratch-1: The Transformer Backbone @@ -309,7 +309,7 @@ A: Check: ## 11. Deadline -**Due**: Tuesday, January 27, 9:00 AM MST +**Due**: Sunday, February 1, 9:00 AM MST Late submissions: 10% penalty per day (max 3 days late) From 0474c6f9747f500ddb64f5d93395aa16bbb903dd Mon Sep 17 00:00:00 2001 From: Christoffer Heckman Date: Sat, 24 Jan 2026 11:54:34 -0700 Subject: [PATCH 02/38] Initial commit: Private VLA Foundations with solution infrastructure - Complete testing infrastructure (public & internal tests) - Solution management scripts (inject/reset) - Sanitization pipeline for public sync - GitHub Actions workflow for automated sync - Complete documentation (setup guides, references) - Example solution for scratch-1 assignment See PRIVATE_REPO_SETUP.md for complete architecture details. --- .github/workflows/deploy-staging.yml | 56 + .github/workflows/deploy.yml | 40 + .github/workflows/sync-to-public.yml | 109 + .github/workflows/vla-audit.yml | 146 + .gitignore | 60 + APACHE_CONFIG.md | 128 + API_SETUP.md | 108 + DEPLOYMENT_SUCCESS.md | 187 + INSTRUCTOR_GUIDE.md | 246 + PRIVATE_REPO_SETUP.md | 474 + QUICK_REFERENCE.md | 245 + QUICK_START_SSH.md | 97 + README.md | 398 + REVIEW_SYSTEM.md | 132 + SETUP_WITH_GH_CLI.md | 328 + SYSTEM_COMPLETE.md | 237 + app/contributors/[slug]/page.tsx | 109 + app/contributors/page.tsx | 107 + app/course/assignments/[slug]/page.tsx | 111 + app/course/page.tsx | 111 + app/favicon.ico | Bin 0 -> 25931 bytes app/globals.css | 23 + app/layout.tsx | 35 + app/page.tsx | 240 + app/reference/page.tsx | 31 + app/textbook/[slug]/page.tsx | 69 + app/textbook/audits/[...slug]/page.tsx | 157 + app/textbook/audits/page.tsx | 160 + complete-setup.sh | 143 + components/audit/AuditLayout.tsx | 41 + components/textbook/Sidebar.tsx | 63 + components/textbook/TextbookLayout.tsx | 36 + content/contributors/.gitkeep | 0 content/contributors/Hhy903.mdx | 28 + content/contributors/Soorej30.mdx | 31 + content/contributors/Zaaler.mdx | 29 + content/contributors/_template.mdx | 40 + content/contributors/antony-zhao.mdx | 31 + content/contributors/aritrach.mdx | 33 + content/contributors/cKohl10.mdx | 28 + content/contributors/christoffer-heckman.mdx | 28 + content/contributors/gyanigk.mdx | 28 + content/contributors/himanshugupta1009.mdx | 30 + content/contributors/jdvakil.mdx | 39 + content/contributors/jt7347.mdx | 27 + content/contributors/kalhamilton.mdx | 40 + content/contributors/lorinachey.mdx | 31 + content/contributors/melissa-krusniak.mdx | 52 + content/contributors/yi-shiuan-tung.mdx | 31 + content/contributors/yuni-wyx.mdx | 30 + content/contributors/zakariya-laouar.mdx | 28 + content/course/Syllabus.mdx | 190 + content/course/assignments/capstone.mdx | 377 + content/course/assignments/paper-audit.mdx | 248 + content/course/assignments/scratch-0.mdx | 191 + content/course/assignments/scratch-1.mdx | 333 + content/course/submissions/scratch-1/.gitkeep | 0 content/textbook/applications/index.mdx | 45 + content/textbook/architectures/index.mdx | 30 + content/textbook/audits/README.md | 222 + content/textbook/audits/_template.mdx | 92 + content/textbook/audits/staging/.gitkeep | 0 content/textbook/audits/staging/README.md | 4 + content/textbook/data/index.mdx | 39 + content/textbook/deployment/index.mdx | 39 + content/textbook/evaluation/index.mdx | 39 + content/textbook/foundations/index.mdx | 33 + content/textbook/future/index.mdx | 51 + content/textbook/training/index.mdx | 30 + deploy-staging-dynamic.sh | 90 + eslint.config.mjs | 18 + lib/audits.ts | 73 + lib/chapters.ts | 58 + mdx-components.tsx | 7 + next.config.ts | 31 + package-lock.json | 9089 ++++ package.json | 38 + pnpm-lock.yaml | 5624 +++ postcss.config.js | 6 + postcss.config.mjs | 7 + pr.txt | 34458 ++++++++++++++++ private/README.md | 168 + private/solutions/backbone_solution.py | 459 + public/file.svg | 1 + public/globe.svg | 1 + public/next.svg | 1 + public/vercel.svg | 1 + public/window.svg | 1 + pytest.ini | 12 + scripts/_sanitize_todos.py | 139 + scripts/add_github_secret.sh | 73 + scripts/audit_linter.py | 150 + scripts/deploy.sh | 56 + scripts/manage_solutions.py | 198 + scripts/review-prs.sh | 49 + scripts/sanitize.sh | 120 + scripts/setup_private_repo.sh | 208 + src/assignments/scratch-1/README.md | 25 + src/assignments/scratch-1/TEST_RESULTS.md | 146 + src/assignments/scratch-1/backbone.py | 460 + src/assignments/scratch-1/data/.gitkeep | 0 .../scratch-1/data/trajectories_test.pkl | Bin 0 -> 2400730 bytes src/assignments/scratch-1/generate_data.py | 273 + src/assignments/scratch-1/test_scratch1.py | 338 + tailwind.config.ts | 35 + tests/README.md | 276 + tests/__init__.py | 8 + tests/conftest.py | 123 + tests/internal/__init__.py | 9 + tests/internal/conftest.py | 93 + tests/internal/fixtures/.gitkeep | 49 + tests/internal/test_scratch1_rigor.py | 387 + tests/public/__init__.py | 6 + tests/public/test_scratch1_basic.py | 294 + tsconfig.json | 34 + vercel.json | 14 + 116 files changed, 60680 insertions(+) create mode 100644 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app/reference/page.tsx create mode 100644 app/textbook/[slug]/page.tsx create mode 100644 app/textbook/audits/[...slug]/page.tsx create mode 100644 app/textbook/audits/page.tsx create mode 100755 complete-setup.sh create mode 100644 components/audit/AuditLayout.tsx create mode 100644 components/textbook/Sidebar.tsx create mode 100644 components/textbook/TextbookLayout.tsx create mode 100644 content/contributors/.gitkeep create mode 100644 content/contributors/Hhy903.mdx create mode 100644 content/contributors/Soorej30.mdx create mode 100644 content/contributors/Zaaler.mdx create mode 100644 content/contributors/_template.mdx create mode 100644 content/contributors/antony-zhao.mdx create mode 100644 content/contributors/aritrach.mdx create mode 100644 content/contributors/cKohl10.mdx create mode 100644 content/contributors/christoffer-heckman.mdx create mode 100644 content/contributors/gyanigk.mdx create mode 100644 content/contributors/himanshugupta1009.mdx create mode 100644 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src/assignments/scratch-1/test_scratch1.py create mode 100644 tailwind.config.ts create mode 100644 tests/README.md create mode 100644 tests/__init__.py create mode 100644 tests/conftest.py create mode 100644 tests/internal/__init__.py create mode 100644 tests/internal/conftest.py create mode 100644 tests/internal/fixtures/.gitkeep create mode 100644 tests/internal/test_scratch1_rigor.py create mode 100644 tests/public/__init__.py create mode 100644 tests/public/test_scratch1_basic.py create mode 100644 tsconfig.json create mode 100644 vercel.json diff --git a/.github/workflows/deploy-staging.yml b/.github/workflows/deploy-staging.yml new file mode 100644 index 00000000..ef8a3522 --- /dev/null +++ b/.github/workflows/deploy-staging.yml @@ -0,0 +1,56 @@ +name: Deploy Staging Branch + +on: + push: + branches: [ staging ] + paths: + # Only trigger on content/frontend changes + - 'app/**' + - 'content/**' + - 'components/**' + - 'lib/**' + - 'public/**' + - 'next.config.ts' + - 'package.json' + - 'tailwind.config.ts' + paths-ignore: + # Ignore changes that don't affect the site + - 'src/assignments/**' + - 'scripts/**' + - 'tests/**' + - 'private/**' + - '**.md' + - '.github/**' + +jobs: + deploy: + runs-on: ubuntu-latest + steps: + - name: Deploy Static Site to Remote Server + uses: appleboy/ssh-action@v1.0.3 + with: + host: ristoffer.ch + username: crh + key: ${{ secrets.SSH_DEPLOY_KEY }} + script: | + # Navigate to staging build directory + cd ~/vla-staging || mkdir -p ~/vla-staging + cd ~/vla-staging + + # Clone or pull staging branch + if [ ! -d ".git" ]; then + git clone -b staging https://github.com/arpg/vla-foundations.git . + else + git fetch origin staging + git reset --hard origin/staging + fi + + # Install dependencies and build + npm install + npm run build + + # Deploy to staging subdirectory + mkdir -p /var/www/vlm-robotics.dev/public_html/staging + cp -r out/* /var/www/vlm-robotics.dev/public_html/staging/ + + echo "Staging deployment completed at $(date)" diff --git a/.github/workflows/deploy.yml b/.github/workflows/deploy.yml new file mode 100644 index 00000000..c6a4a86c --- /dev/null +++ b/.github/workflows/deploy.yml @@ -0,0 +1,40 @@ +name: Deploy to Production + +on: + push: + branches: [ main ] + paths: + # Only trigger on content/frontend changes + - 'app/**' + - 'content/**' + - 'components/**' + - 'lib/**' + - 'public/**' + - 'next.config.ts' + - 'package.json' + - 'tailwind.config.ts' + paths-ignore: + # Ignore changes that don't affect the site + - 'src/assignments/**' + - 'scripts/**' + - 'tests/**' + - 'private/**' + - '**.md' + - '.github/**' + +jobs: + deploy: + runs-on: ubuntu-latest + steps: + - name: Deploy to Remote Server + uses: appleboy/ssh-action@v1.0.3 + with: + host: ristoffer.ch + username: crh + key: ${{ secrets.SSH_DEPLOY_KEY }} + script: | + cd ~/vla-build + git pull origin main + npm run build + rsync -av --delete out/ /var/www/vlm-robotics.dev/public_html/ + echo "Deployment completed at $(date)" diff --git a/.github/workflows/sync-to-public.yml b/.github/workflows/sync-to-public.yml new file mode 100644 index 00000000..f15d1553 --- /dev/null +++ b/.github/workflows/sync-to-public.yml @@ -0,0 +1,109 @@ +name: Sync to Public Repo + +on: + push: + tags: + - 'release-scratch-*' # Trigger on release tags like release-scratch-1, release-scratch-2, etc. + +jobs: + sanitize-and-sync: + runs-on: ubuntu-latest + + steps: + - name: Checkout private repo + uses: actions/checkout@v4 + with: + fetch-depth: 0 # Full history for proper sync + token: ${{ secrets.GITHUB_TOKEN }} + + - name: Set up Python + uses: actions/setup-python@v5 + with: + python-version: '3.11' + + - name: Display repository state + run: | + echo "=== Repository State Before Sanitization ===" + echo "Current branch/tag: $(git describe --tags --always)" + echo "Private directories:" + ls -la private/ 2>/dev/null || echo " (not found)" + ls -la tests/internal/ 2>/dev/null || echo " (not found)" + echo "" + + - name: Run sanitization script + run: | + echo "Running sanitization..." + bash scripts/sanitize.sh + + - name: Display repository state after sanitization + run: | + echo "=== Repository State After Sanitization ===" + echo "Remaining files:" + git status + echo "" + echo "Changed files:" + git diff HEAD~1 --name-only || echo "(no previous commit)" + echo "" + + - name: Dry run check for leaks + run: | + echo "=== Checking for Solution Leaks ===" + + # Check for TODO: [SOLUTION] comments + if grep -r "TODO:.*\[SOLUTION\]" src/ content/ 2>/dev/null; then + echo "❌ ERROR: Found TODO: [SOLUTION] in sanitized code!" + exit 1 + fi + + # Check for inline [SOLUTION] comments + if grep -r "\[SOLUTION\]" src/ content/ 2>/dev/null; then + echo "❌ ERROR: Found [SOLUTION] markers in sanitized code!" + exit 1 + fi + + # Check that private/ is gone + if [ -d "private/" ]; then + echo "❌ ERROR: private/ directory still exists!" + exit 1 + fi + + # Check that tests/internal/ is gone + if [ -d "tests/internal/" ]; then + echo "❌ ERROR: tests/internal/ directory still exists!" + exit 1 + fi + + # Check that solution management script is gone + if [ -f "scripts/manage_solutions.py" ]; then + echo "❌ ERROR: manage_solutions.py still exists!" + exit 1 + fi + + echo "✅ Dry run passed: No solution leaks detected" + + - name: Push to public repo + env: + PUBLIC_REPO_TOKEN: ${{ secrets.PUBLIC_REPO_TOKEN }} + run: | + # Configure git + git config user.name "GitHub Actions" + git config user.email "actions@github.com" + + # Add public remote + git remote add public https://x-access-token:${PUBLIC_REPO_TOKEN}@github.com/arpg/vla-foundations.git + + # Get the tag name + TAG_NAME=${GITHUB_REF#refs/tags/} + echo "Syncing tag: $TAG_NAME" + + # Push to public repo on a release branch + RELEASE_BRANCH="public-release-${TAG_NAME}" + git checkout -b "$RELEASE_BRANCH" + git push public "$RELEASE_BRANCH" --force + + echo "✅ Synced to public repo (branch: $RELEASE_BRANCH)" + echo "" + echo "Next steps:" + echo " 1. Review the changes at: https://github.com/arpg/vla-foundations/tree/$RELEASE_BRANCH" + echo " 2. Create a PR to merge $RELEASE_BRANCH into main/staging" + echo " 3. After review, merge the PR to publish the release" diff --git a/.github/workflows/vla-audit.yml b/.github/workflows/vla-audit.yml new file mode 100644 index 00000000..804c8b20 --- /dev/null +++ b/.github/workflows/vla-audit.yml @@ -0,0 +1,146 @@ +name: VLA Content Audit +on: + pull_request: + branches: [ staging, main ] + +permissions: + contents: write + pull-requests: write + +jobs: + audit: + runs-on: ubuntu-latest + steps: + - uses: actions/checkout@v4 + with: + fetch-depth: 0 # Fetch all history for diff + + - uses: pnpm/action-setup@v2 + with: + version: 8 + + - uses: actions/setup-node@v4 + with: + node-version: '20' + cache: 'pnpm' + + - run: pnpm install + + - name: Standards Linter + id: linter + run: python3 scripts/audit_linter.py + continue-on-error: true + + - name: Comment on Linter Failure + if: steps.linter.outcome == 'failure' + uses: marocchino/sticky-pull-request-comment@v2 + with: + message: | + ## ❌ Engineering Standards Check Failed + + Your audit does not meet the required "Senior Staff" engineering standards. Please address the following issues before requesting instructor review: + + ### Common Issues: + + **1. Semantic Line Breaks** + - Each sentence should be on its own line + - This makes PR commenting and reviewing much easier + - Example: + ```diff + - This is a very long sentence with multiple ideas. It continues on the same line. This makes PR review difficult. + + This is a sentence on its own line. + + Each idea gets its own line. + + This makes PR review much easier. + ``` + + **2. Clean Git History** + - No "Merge branch 'main'" commits allowed + - Use `git rebase main` instead of `git merge main` + - Keep your commit history linear and clean + + ### How to Fix: + + **For semantic line breaks:** + 1. Edit your MDX file to put each sentence on a new line + 2. Commit and push the changes + + **For git history:** + 1. Run: `git rebase main` (or `git rebase staging`) + 2. Resolve any conflicts if needed + 3. Run: `git push --force-with-lease` + + --- + *The linter will run automatically on your next push. Once all checks pass, your preview will deploy.* + + - name: Fail Build if Linter Failed + if: steps.linter.outcome == 'failure' + run: exit 1 + + - name: Build with PR Preview + env: + STAGING_PR_NUMBER: ${{ github.event.pull_request.number }} + run: pnpm build + + - name: Deploy to GitHub Pages + uses: JamesIves/github-pages-deploy-action@v4 + with: + branch: gh-pages + folder: out + target-folder: staging/pulls/${{ github.event.pull_request.number }} + clean: false + + - name: Detect Content Type + id: detect + run: | + # Get files changed in this PR + git fetch origin ${{ github.base_ref }} + FILES=$(git diff --name-only origin/${{ github.base_ref }}...HEAD) + + if echo "$FILES" | grep -q "content/textbook/audits/staging/"; then + echo "type=audit" >> $GITHUB_OUTPUT + # Extract the audit filename + AUDIT_FILE=$(echo "$FILES" | grep "content/textbook/audits/staging/" | head -1 | xargs basename | sed 's/\.mdx$//') + echo "slug=textbook/audits/staging/${AUDIT_FILE}" >> $GITHUB_OUTPUT + elif echo "$FILES" | grep -q "content/textbook/audits/.*\.mdx"; then + echo "type=audit" >> $GITHUB_OUTPUT + # Extract the audit filename (production location) + AUDIT_FILE=$(echo "$FILES" | grep "content/textbook/audits/.*\.mdx" | grep -v "staging/" | head -1 | xargs basename | sed 's/\.mdx$//') + echo "slug=textbook/audits/${AUDIT_FILE}" >> $GITHUB_OUTPUT + elif echo "$FILES" | grep -q "content/contributors/"; then + echo "type=contributor" >> $GITHUB_OUTPUT + # Extract the contributor filename + CONTRIB_FILE=$(echo "$FILES" | grep "content/contributors/" | head -1 | xargs basename | sed 's/\.mdx$//') + echo "slug=contributors/${CONTRIB_FILE}" >> $GITHUB_OUTPUT + else + echo "type=other" >> $GITHUB_OUTPUT + echo "slug=" >> $GITHUB_OUTPUT + fi + + - name: Comment PR with Preview Link + uses: marocchino/sticky-pull-request-comment@v2 + with: + message: | + 🚀 **Preview Deployed** + + Your preview is ready for review! + + 🔗 **Preview URL:** https://${{ github.repository_owner }}.github.io/${{ github.event.repository.name }}/staging/pulls/${{ github.event.pull_request.number }}/${{ steps.detect.outputs.slug }}/ + + ${{ steps.detect.outputs.type == 'audit' && '### Review Checklist + - [ ] LaTeX equations render correctly + - [ ] All sections are complete per the template + - [ ] References are formatted properly + - [ ] Figures/diagrams display correctly' || '' }} + + ${{ steps.detect.outputs.type == 'contributor' && '### Review Checklist + - [ ] Profile information is complete + - [ ] Image displays correctly + - [ ] Links are working' || '' }} + + ### Next Steps + 1. Review your rendered content using the preview link above + 2. Tag @crheckman when ready for instructor review + 3. Push updates to auto-refresh the preview + + --- + *This preview will be removed when the PR is closed.* diff --git a/.gitignore b/.gitignore new file mode 100644 index 00000000..d3138959 --- /dev/null +++ b/.gitignore @@ -0,0 +1,60 @@ +# See https://help.github.com/articles/ignoring-files/ for more about ignoring files. + +# dependencies +/node_modules +/.pnp +.pnp.* +.yarn/* +!.yarn/patches +!.yarn/plugins +!.yarn/releases +!.yarn/versions + +# testing +/coverage + +# next.js +/.next/ +/out/ + +# production +/build + +# misc +.DS_Store +*.pem + +# debug +npm-debug.log* +yarn-debug.log* +yarn-error.log* +.pnpm-debug.log* + +# env files (can opt-in for committing if needed) +.env* + +# vercel +.vercel + +# typescript +*.tsbuildinfo +next-env.d.ts + +# deployment +/public_html/ +/logs/ +/database/ +!database/comments/ + +# python +/venv/ +*.pyc +__pycache__/ + +# project-specific +/arxiv-digest/ + +# Private solution infrastructure (NEVER commit to public branches) +private/ +tests/internal/ +*.backup.py diff --git a/APACHE_CONFIG.md b/APACHE_CONFIG.md new file mode 100644 index 00000000..73e4f6dc --- /dev/null +++ b/APACHE_CONFIG.md @@ -0,0 +1,128 @@ +# Apache Configuration for Dynamic Staging + +## Option 1: Subdirectory (/staging) + +Add to `/etc/apache2/sites-available/vlm-robotics.dev.conf`: + +```apache + + ServerName vlm-robotics.dev + + # Static production site + DocumentRoot /var/www/vlm-robotics.dev/public_html + + # Proxy staging requests to Next.js server + ProxyPass /staging http://localhost:3002 + ProxyPassReverse /staging http://localhost:3002 + ProxyPreserveHost On + + + AllowOverride All + Require all granted + + +``` + +## Option 2: Subdomain (staging.vlm-robotics.dev) [RECOMMENDED] + +Create `/etc/apache2/sites-available/staging.vlm-robotics.dev.conf`: + +```apache + + ServerName staging.vlm-robotics.dev + + # Proxy everything to Next.js server + ProxyPass / http://localhost:3002/ + ProxyPassReverse / http://localhost:3002/ + ProxyPreserveHost On + + # WebSocket support (if needed) + RewriteEngine On + RewriteCond %{HTTP:Upgrade} websocket [NC] + RewriteCond %{HTTP:Connection} upgrade [NC] + RewriteRule ^/?(.*) "ws://localhost:3002/$1" [P,L] + +``` + +Enable and restart: + +```bash +sudo a2ensite staging.vlm-robotics.dev.conf +sudo a2enmod proxy proxy_http rewrite +sudo systemctl restart apache2 +``` + +## Environment Variables + +Create `/home/crh/vla-staging/.env.local`: + +```bash +# Set base path if using subdirectory +# Leave empty if using subdomain +BASE_PATH= + +# Port for Next.js server +PORT=3002 +``` + +## Process Management + +Instead of nohup, use systemd for proper process management: + +Create `/etc/systemd/system/vla-staging.service`: + +```ini +[Unit] +Description=VLA Foundations Staging (Next.js) +After=network.target + +[Service] +Type=simple +User=crh +WorkingDirectory=/home/crh/vla-staging +ExecStart=/usr/bin/npm start -- -p 3002 +Restart=always +RestartSec=10 +Environment=NODE_ENV=production + +[Install] +WantedBy=multi-user.target +``` + +Enable and start: + +```bash +sudo systemctl daemon-reload +sudo systemctl enable vla-staging +sudo systemctl start vla-staging +sudo systemctl status vla-staging +``` + +View logs: + +```bash +sudo journalctl -u vla-staging -f +``` + +## Testing + +```bash +# Test Next.js server directly +curl http://localhost:3002/ + +# Test via Apache +curl http://staging.vlm-robotics.dev/ + +# Test API endpoint +curl http://staging.vlm-robotics.dev/api/comments/23 +``` + +## Automatic Deployment + +Update `.github/workflows/deploy-staging.yml` to restart the service: + +```yaml +- name: Restart staging service + run: | + sudo systemctl restart vla-staging +``` diff --git a/API_SETUP.md b/API_SETUP.md new file mode 100644 index 00000000..e83b335e --- /dev/null +++ b/API_SETUP.md @@ -0,0 +1,108 @@ +# API Server Setup for Comments + +The commenting system requires a Node.js API server running alongside the static site. + +## Architecture + +- **Static Site**: Next.js static export (no server-side rendering) +- **API Server**: Express.js server on port 3001 +- **Proxy**: Apache/Nginx proxies `/api/*` requests to `localhost:3001` + +## Server Setup + +### 1. Apache Proxy Configuration + +Add to Apache config or create `/var/www/vlm-robotics.dev/public_html/api/.htaccess`: + +```apache +RewriteEngine On +RewriteRule ^(.*)$ http://localhost:3001/api/$1 [P,L] +``` + +Or in your Apache virtual host config: + +```apache + + ServerName vlm-robotics.dev + + # Proxy API requests to Node.js + ProxyPass /api http://localhost:3001/api + ProxyPassReverse /api http://localhost:3001/api + + # Static files + DocumentRoot /var/www/vlm-robotics.dev/public_html + +``` + +### 2. Manual API Server Start + +SSH to ristoffer.ch: + +```bash +cd ~/vla-staging/api-server +npm install +npm start & +``` + +Or with PM2 (process manager): + +```bash +cd ~/vla-staging/api-server +npm install -g pm2 +pm2 start server.js --name vla-comments-api +pm2 save +pm2 startup # Enable auto-start on boot +``` + +### 3. Verify API is Running + +```bash +# Check PM2 status +pm2 status + +# Test health endpoint +curl http://localhost:3001/health + +# Test from outside (after proxy setup) +curl https://vlm-robotics.dev/api/comments/23 +``` + +## Deployment + +The GitHub Actions workflow automatically: +1. Builds and deploys the static site +2. Installs API server dependencies +3. Restarts the API server with PM2 + +## Troubleshooting + +**API not responding:** +```bash +pm2 logs vla-comments-api +``` + +**Restart API server:** +```bash +pm2 restart vla-comments-api +``` + +**Check if port 3001 is in use:** +```bash +lsof -i :3001 +``` + +## Local Development + +To run locally: + +```bash +# Terminal 1: Start API server +cd api-server +npm install +npm start + +# Terminal 2: Start Next.js dev server +npm run dev +``` + +The frontend will proxy API requests to `http://localhost:3001`. diff --git a/DEPLOYMENT_SUCCESS.md b/DEPLOYMENT_SUCCESS.md new file mode 100644 index 00000000..3e0bf57d --- /dev/null +++ b/DEPLOYMENT_SUCCESS.md @@ -0,0 +1,187 @@ +# 🎉 Deployment Complete! + +## System Overview + +Your student paper audit review system is now live and fully operational. + +## Live URLs + +### Staging Site +- **Audits Index**: http://vlm-robotics.dev/staging/textbook/audits/ +- **Sample Audit**: http://vlm-robotics.dev/staging/textbook/audits/multimodality_audit +- **Review Mode**: http://vlm-robotics.dev/staging/textbook/audits/multimodality_audit?review=true + +### API Endpoints +- **Comments**: http://vlm-robotics.dev/staging/api/comments/23 + +## Architecture + +### Frontend (Next.js - Dynamic Mode) +- Running on port 3002 +- Location: `~/vla-staging/` on ristoffer.ch +- Process: Started with nohup, PID stored in `~/vla-staging-server.pid` +- Logs: `~/vla-staging-server.log` + +### Apache Proxy +- Configuration: `/etc/apache2/sites-available/vlm-robotics.dev.conf` +- Proxies `/staging` → `localhost:3002` + +### Comments Storage +- Location: `~/vla-staging/database/comments/` +- Format: `{pr-number}.json` files +- Example: `~/vla-staging/database/comments/23.json` + +## How It Works + +### For You (Instructor): + +1. **Student submits PR to staging branch** + ```bash + gh pr list --base staging + ``` + +2. **Merge PR to staging** + ```bash + gh pr merge {number} --merge --into staging + ``` + +3. **Pull latest on server and rebuild** + ```bash + ssh crh@ristoffer.ch + cd ~/vla-staging + git pull origin staging + npm run build + pkill -f 'next start' + nohup npm start -- -p 3002 > ~/vla-staging-server.log 2>&1 & + ``` + +4. **Review the audit** + - Visit: `http://vlm-robotics.dev/staging/textbook/audits/{slug}?review=true` + - Add comments via the sidebar + - Comments automatically save to database + +5. **Student updates based on feedback** + - They push new commits to same PR branch + - You repeat step 3 to see updates + - Previous comments persist (tied to PR number) + +6. **When approved, merge to main** + ```bash + git checkout main + git merge staging + git push origin main + ``` + +### For Students: + +1. Create audit file in `content/textbook/audits/{topic}_audit.mdx` +2. Add frontmatter: + ```yaml + --- + title: 'Your Audit Title' + author: 'your-github-username' + prNumber: XX + --- + ``` +3. Submit PR to `staging` branch +4. Receive comments from instructor +5. Push updates to same branch +6. Get merged to main when approved + +## Managing the Server + +### Check if server is running +```bash +ssh crh@ristoffer.ch "ps aux | grep 'next start' | grep -v grep" +``` + +### View logs +```bash +ssh crh@ristoffer.ch "tail -f ~/vla-staging-server.log" +``` + +### Restart server +```bash +ssh crh@ristoffer.ch "cd ~/vla-staging && pkill -f 'next start' && nohup npm start -- -p 3002 > ~/vla-staging-server.log 2>&1 &" +``` + +### Test endpoints +```bash +# Homepage +curl http://localhost:3002/ + +# API +curl http://localhost:3002/api/comments/23 + +# Via Apache +curl http://vlm-robotics.dev/staging/ +``` + +## Features + +✅ **Visual commenting** - Comment directly on rendered audits +✅ **Persistent feedback** - Comments stored with PR number, survive rebases +✅ **Review mode** - Toggle between public view and instructor review +✅ **Dynamic rendering** - Full Next.js server with API routes +✅ **Staging workflow** - Review before merging to production + +## Comment Data Structure + +```json +{ + "prNumber": 23, + "auditSlug": "multimodality_audit", + "comments": [ + { + "id": "uuid", + "sectionId": "introduction", + "text": "Your feedback here", + "author": "instructor", + "timestamp": "2026-01-21T...", + "resolved": false + } + ] +} +``` + +## Files Modified + +- `/app/textbook/audits/[slug]/page.tsx` - Dynamic audit pages +- `/app/textbook/audits/page.tsx` - Audits index (fixed onClick handler) +- `/app/api/comments/[prNumber]/route.ts` - GET/POST comments +- `/app/api/comments/[prNumber]/[commentId]/route.ts` - PUT/DELETE comments +- `/components/audit/AuditLayout.tsx` - Layout with client-side review detection +- `/components/audit/CommentSidebar.tsx` - Comment UI +- `/lib/audits.ts` - Audit data management +- `/next.config.ts` - Dynamic mode (no static export) + +## Server Configuration + +### Apache VirtualHost Addition +```apache +# In /etc/apache2/sites-available/vlm-robotics.dev.conf +ProxyPass /staging http://localhost:3002 +ProxyPassReverse /staging http://localhost:3002 +ProxyPreserveHost On +``` + +### Next.js Config +```typescript +// Dynamic mode (no static export) +const nextConfig: NextConfig = { + trailingSlash: true, + images: { unoptimized: true }, + turbopack: {}, +}; +``` + +## Next Steps + +1. Test adding a comment via the UI +2. Test marking a comment as resolved +3. Have a student submit a PR to test the full workflow +4. Consider setting up systemd service for auto-restart + +## Victory! 🎊 + +The system is fully operational and ready for student paper audit reviews. diff --git a/INSTRUCTOR_GUIDE.md b/INSTRUCTOR_GUIDE.md new file mode 100644 index 00000000..99a532fa --- /dev/null +++ b/INSTRUCTOR_GUIDE.md @@ -0,0 +1,246 @@ +# Instructor Guide: Paper Audit Review Workflow + +## Overview + +Students submit paper audits via Pull Requests to the `staging` branch. The system automatically: +1. Runs a standards linter +2. Deploys preview to GitHub Pages +3. Posts preview link in PR comments + +Once approved, you promote the audit from `staging/` to production and merge to `main`. + +--- + +## Student Submission Workflow + +### 1. Student Creates PR + +Students follow these steps (from `content/course/assignments/paper-audit.mdx`): + +```bash +git checkout -b audit/username-topic +# Add audit file to: content/textbook/audits/staging/username.mdx +git add content/textbook/audits/staging/username.mdx +git commit -m "audit: add [Paper] deep-dive by [Name]" +git push origin audit/username-topic +``` + +Then create PR with: +- **Base branch:** `staging` +- **Title:** `Audit: [Paper Topic] - [Name]` + +### 2. Automated Linter Check + +The `vla-audit.yml` workflow automatically runs: + +**Standards Checked:** +- ✅ Semantic line breaks (one sentence per line) +- ✅ Clean git history (no "Merge branch" commits) + +**If linter fails:** +- Bot posts detailed instructions in PR comments +- Build is blocked until standards are met + +**If linter passes:** +- Build deploys to: `https://arpg.github.io/vla-foundations/staging/pulls/{PR_NUMBER}/textbook/audits/staging/{username}/` +- Bot posts preview link in PR comments + +### 3. Instructor Review + +Navigate to the preview URL (posted in PR comments) to review the rendered audit. + +**Add feedback directly in GitHub PR:** +- Use GitHub's native PR review features +- Comment on specific lines +- Request changes or approve + +**Common feedback areas:** +- Mathematical rigor and LaTeX correctness +- Architectural depth and comparative analysis +- Citations and references +- Physical grounding critique (the "load-bearing" analysis) + +--- + +## Promoting Audit to Production (Merge-Ready) + +When an audit reaches "Level 3 (A - Mastery)" quality: + +### Step 1: Move File from Staging to Production + +```bash +# Checkout the PR branch +gh pr checkout {PR_NUMBER} + +# Move the audit file to production location +git mv content/textbook/audits/staging/{username}.mdx content/textbook/audits/{canonical-name}.mdx + +# Example: +git mv content/textbook/audits/staging/gyanigkali.mdx content/textbook/audits/multimodality_audit.mdx + +# Commit the promotion +git commit -m "Promote audit to production: ready for merge" + +# Push the change +git push +``` + +### Step 2: Merge PR to Staging + +```bash +gh pr merge {PR_NUMBER} --merge --repo arpg/vla-foundations +``` + +This merges the PR into `staging` branch. + +### Step 3: Merge Staging to Main + +```bash +git checkout main +git pull origin main +git merge staging +git push origin main +``` + +### Step 4: Verify Production Deployment + +The `Deploy to Production` workflow will automatically run and: +- Pull latest `main` branch +- Run `npm run build` +- Sync to production server with `rsync --delete` +- Deploy to: `https://vlm-robotics.dev/textbook/audits/{canonical-name}/` + +Check the deployment: https://github.com/arpg/vla-foundations/actions/workflows/deploy.yml + +--- + +## URL Structure + +| Environment | Location | Audience | +|------------|----------|----------| +| **PR Preview** | `arpg.github.io/vla-foundations/staging/pulls/{PR}/...` | Student + Instructor | +| **Staging** | `vlm-robotics.dev/staging/...` | Testing only | +| **Production** | `vlm-robotics.dev/textbook/audits/{canonical-name}` | Public | + +--- + +## File Structure + +``` +content/textbook/audits/ +├── staging/ # Student drafts under review +│ ├── gyanigkali.mdx # PR #23 - in review +│ ├── johndoe.mdx # PR #24 - in review +│ └── .gitkeep +├── multimodality_audit.mdx # Published audit (merged from staging/) +├── siglip_audit.mdx # Published audit +└── _template.mdx # Template for students +``` + +**Important:** Files in `staging/` are **only visible in preview deployments**, not in production. Once approved, they **must be moved** to the root `audits/` directory to appear at `vlm-robotics.dev`. + +--- + +## Grading Levels + +### Level 1 (C): Basic Summary +- Correct frontmatter and basic formatting +- Summary of paper's main contributions +- Basic LaTeX rendering + +### Level 2 (B): Technical Deep-Dive +- High technical depth with architectural details +- Correct mathematical formulations +- Sound critique of the model +- Proper citations + +### Level 3 (A - Mastery): Merge-Ready +- Exhaustive technical analysis +- Comparative deep-dive across multiple papers +- Original insights on scaling laws and bottlenecks +- Physical grounding critique (semantic-motor gap, information decay) +- Professional "Senior Staff" engineering quality +- **Ready to merge to main as canonical reference** + +--- + +## Troubleshooting + +### Linter Keeps Failing + +**Check line breaks:** +```bash +# The student's file should have semantic line breaks +# Bad: +Multi-modality is the framework that enables a model to process and generate information across disparate data types. In robotics, this represents the shift from a robot that sees its environment versus one that can understand it. + +# Good: +Multi-modality is the framework that enables a model to process and generate information across disparate data types. +In robotics, this represents the shift from a robot that sees its environment versus one that can understand it. +``` + +**Check git history:** +```bash +# If student has merge commits: +git log --oneline +# Should not see: "Merge branch 'main'" or "Merge branch 'staging'" + +# Student needs to rebase: +git rebase staging +git push --force-with-lease +``` + +### Preview Isn't Deploying + +1. Check GitHub Actions: https://github.com/arpg/vla-foundations/actions +2. Verify linter passed (green checkmark) +3. Check PR comments for deployment link + +### Production Page Still Shows Old Audit + +This happens if the deploy script doesn't delete old files. + +**Fix:** The deploy.yml now uses `rsync --delete` to properly sync files. Force a redeploy: +```bash +git commit --allow-empty -m "Trigger redeploy" +git push origin main +``` + +### Student Can't Find Their Preview + +The preview URL is posted automatically in PR comments by the bot: +- Look for the comment from `github-actions` bot +- URL format: `https://arpg.github.io/vla-foundations/staging/pulls/{PR}/textbook/audits/staging/{username}/` + +--- + +## Tips for Effective Reviews + +1. **Use GitHub's PR review features** - Line-specific comments are best +2. **Require semantic line breaks** - Makes commenting much easier +3. **Check LaTeX rendering** - View the preview, not just the markdown +4. **Verify references** - Click through to cited papers +5. **Test on mobile** - Ensure equations and diagrams are responsive +6. **Look for the "load-bearing" analysis** - This is what distinguishes A-level work + +--- + +## Quick Reference Commands + +```bash +# Review a PR +gh pr checkout {PR_NUMBER} +gh pr view {PR_NUMBER} --web + +# Check linter locally +python3 scripts/audit_linter.py + +# Promote to production +git mv content/textbook/audits/staging/{user}.mdx content/textbook/audits/{name}.mdx +git commit -m "Promote audit to production" +git push + +# Merge to staging and main +gh pr merge {PR_NUMBER} --merge +git checkout main && git merge staging && git push origin main +``` diff --git a/PRIVATE_REPO_SETUP.md b/PRIVATE_REPO_SETUP.md new file mode 100644 index 00000000..578204dd --- /dev/null +++ b/PRIVATE_REPO_SETUP.md @@ -0,0 +1,474 @@ +# Private Solution Repository Setup Guide + +This document describes the complete architecture for managing private solutions and internal grading tests for VLA Foundations assignments. + +## Overview + +The VLA Foundations repository uses a **private mirror architecture** that: +1. Stores complete assignment solutions (never public) +2. Provides internal "Grading Engine" tests with rigorous validation +3. Syncs sanitized code to public repository automatically +4. Minimizes unnecessary rebuilds during sync + +## Repository Architecture + +``` +┌────────────────────────────────────────────────────┐ +│ PRIVATE REPO (instructor only) │ +│ github.com/crheckman/private-vla-foundations │ +│ ├── private/solutions/ (NEVER PUBLIC) │ +│ ├── tests/internal/ (NEVER PUBLIC) │ +│ ├── scripts/manage_solutions.py (inject/reset) │ +│ ├── scripts/sanitize.sh (automated cleanup) │ +│ └── src/assignments/ (with solution hints) │ +└────────────────────┬───────────────────────────────┘ + │ GitHub Action on tag: release-scratch-* + │ Runs scripts/sanitize.sh + │ Deletes private/, sanitizes comments + ▼ +┌────────────────────────────────────────────────────┐ +│ PUBLIC REPO (arpg/vla-foundations) │ +│ ├── src/assignments/ (starter code only) │ +│ ├── tests/public/ (basic validation) │ +│ ├── content/ (assignment specs) │ +│ └── .github/workflows/ (deploy on content/) │ +└────────────────────────────────────────────────────┘ +``` + +## Directory Structure + +### Private Repository + +``` +vla-foundations/ # Private repo root +├── private/ # NEVER synced to public +│ ├── solutions/ +│ │ ├── backbone_solution.py # Complete implementations +│ │ └── checkpoints/ +│ │ └── scratch1_gold.pt # Trained models +│ └── README.md # Solution usage guide +│ +├── tests/ +│ ├── conftest.py # Shared pytest config +│ ├── public/ # Tests students can run +│ │ └── test_scratch1_basic.py +│ └── internal/ # NEVER synced to public +│ ├── conftest.py +│ ├── fixtures/ # Gold standards +│ │ └── scratch1_gold.pt +│ └── test_scratch1_rigor.py # Rigorous grading tests +│ +├── scripts/ +│ ├── manage_solutions.py # Inject/reset solutions +│ ├── sanitize.sh # Main sanitization script +│ └── _sanitize_todos.py # TODO comment cleanup +│ +├── src/assignments/scratch-1/ +│ ├── backbone.py # Starter code with TODO: [SOLUTION] hints +│ └── generate_data.py +│ +└── .github/workflows/ + └── sync-to-public.yml # Automated sync workflow +``` + +### Public Repository + +``` +vla-foundations/ # Public repo (after sanitization) +├── tests/ +│ └── public/ # Only public tests +│ └── test_scratch1_basic.py +│ +├── src/assignments/scratch-1/ +│ ├── backbone.py # Starter code (sanitized, no hints) +│ └── generate_data.py +│ +└── content/ # Assignment specifications + └── assignments/ + └── scratch-1.mdx +``` + +## Setup Instructions + +### 1. Create Private Repository + +```bash +# On GitHub: Create new private repository +# Name: private-vla-foundations +# Organization: crheckman (or your personal account) + +# Clone the current repository +git clone https://github.com/arpg/vla-foundations.git private-vla-foundations +cd private-vla-foundations + +# Update remote to point to new private repo +git remote remove origin +git remote add origin https://github.com/crheckman/private-vla-foundations.git +git push -u origin main + +# Add public repo as remote +git remote add public https://github.com/arpg/vla-foundations.git +``` + +### 2. Initialize Private Structure + +The structure has already been created by this implementation. Verify: + +```bash +# Check directory structure +ls -la private/ +ls -la tests/internal/ +ls -la scripts/ + +# Verify .gitignore excludes private content +cat .gitignore | grep private +``` + +### 3. Configure GitHub Secrets + +In your private repository settings (Settings → Secrets and variables → Actions): + +1. **PUBLIC_REPO_TOKEN**: + - Create a Personal Access Token (PAT) with `repo` scope + - Go to GitHub Settings → Developer settings → Personal access tokens + - Generate new token (classic) + - Select scope: `repo` (full control) + - Copy token and add as secret `PUBLIC_REPO_TOKEN` + +### 4. Create First Solution + +```bash +# Create solution file +touch private/solutions/backbone_solution.py + +# Edit and implement complete solution +# (See private/solutions/backbone_solution.py for example) + +# Test solution injection +python scripts/manage_solutions.py --inject scratch-1 + +# Verify files were copied +ls -la src/assignments/scratch-1/ + +# Reset to starter code +python scripts/manage_solutions.py --reset scratch-1 +``` + +### 5. Write Internal Tests + +```bash +# Edit tests/internal/test_scratch1_rigor.py +# Add rigorous validation tests + +# Run internal tests (auto-injects solutions) +pytest tests/internal/test_scratch1_rigor.py -v + +# Solutions are automatically reset after tests complete +``` + +### 6. Test Sanitization + +```bash +# Create a test branch +git checkout -b test-sanitization + +# Run sanitization script +bash scripts/sanitize.sh + +# Verify private content was removed +ls private/ # Should fail - directory deleted +ls tests/internal/ # Should fail - directory deleted + +# Check for solution leaks +grep -r "SOLUTION" src/ content/ # Should find nothing + +# Review changes +git status +git diff + +# Reset to main +git checkout main +git branch -D test-sanitization +``` + +## Workflow for Instructors + +### Developing a New Assignment + +1. **Create assignment in private repo**: + ```bash + # Work in private-vla-foundations + cd src/assignments/scratch-2 + # Create starter code with TODO: [SOLUTION] hints + ``` + +2. **Implement complete solution**: + ```bash + # Create solution file + vim private/solutions/scratch2_solution.py + # Implement complete, working solution + ``` + +3. **Write internal tests**: + ```bash + # Create test file + vim tests/internal/test_scratch2_rigor.py + # Add gradient, fidelity, convergence tests + ``` + +4. **Generate gold standards**: + ```bash + # Inject solution + python scripts/manage_solutions.py --inject scratch-2 + + # Train model + cd src/assignments/scratch-2 + python main.py + + # Save gold standard + cp checkpoints/best.pt ../../../tests/internal/fixtures/scratch2_gold.pt + ``` + +5. **Test everything**: + ```bash + # Test internal grading + pytest tests/internal/test_scratch2_rigor.py -v + + # Test public validation + python scripts/manage_solutions.py --reset scratch-2 + pytest tests/public/test_scratch2_basic.py -v + ``` + +### Releasing to Students + +1. **Commit all changes to private repo**: + ```bash + git add . + git commit -m "Add scratch-2 assignment with solution" + git push origin main + ``` + +2. **Create release tag**: + ```bash + # Tag triggers automatic sync to public repo + git tag release-scratch-2 + git push origin release-scratch-2 + ``` + +3. **GitHub Actions automatically**: + - Runs `scripts/sanitize.sh` + - Removes `private/` directory + - Removes `tests/internal/` directory + - Sanitizes `TODO: [SOLUTION]` comments + - Removes instructor notes from MDX files + - Pushes to public repo branch `public-release-scratch-2` + +4. **Review and merge**: + ```bash + # Go to public repo: https://github.com/arpg/vla-foundations + # Review the `public-release-scratch-2` branch + # Create PR to merge into main + # Review changes carefully + # Merge PR + ``` + +### Updating an Assignment + +1. **Make changes in private repo**: + ```bash + # Edit starter code + vim src/assignments/scratch-1/backbone.py + + # Update solution if needed + vim private/solutions/backbone_solution.py + + # Commit changes + git add . + git commit -m "Update scratch-1: clarify RMSNorm TODO" + git push origin main + ``` + +2. **Create new release tag**: + ```bash + git tag release-scratch-1-v2 + git push origin release-scratch-1-v2 + ``` + +3. **Review and merge to public** (same as above) + +## Testing Infrastructure + +### Public Tests (`tests/public/`) + +**Purpose**: Basic validation that students can run + +```bash +# Students run these tests +pytest tests/public/test_scratch1_basic.py -v +``` + +Tests validate: +- Provided (non-TODO) components work +- Environment is set up correctly +- Basic shapes and types are correct + +### Internal Tests (`tests/internal/`) + +**Purpose**: Rigorous grading validation (instructor only) + +```bash +# Instructors run these tests +pytest tests/internal/test_scratch1_rigor.py -v +``` + +Tests validate: +- Gradient leak detection (frozen parameters) +- Latent fidelity (match gold standards) +- Training convergence +- Edge cases and robustness + +### Test Markers + +```bash +# Run only public tests +pytest -m public -v + +# Run only internal tests +pytest -m internal -v + +# Run gradient leak tests +pytest -m gradient -v + +# Run fidelity tests +pytest -m fidelity -v +``` + +## Solution Management + +### Commands + +```bash +# List available solutions +python scripts/manage_solutions.py --list + +# Inject solutions for testing +python scripts/manage_solutions.py --inject scratch-1 + +# Reset to starter code +python scripts/manage_solutions.py --reset scratch-1 +``` + +### Auto-injection for Internal Tests + +Internal tests automatically inject solutions: + +```bash +# Just run the tests - solutions injected automatically +pytest tests/internal/test_scratch1_rigor.py -v + +# Solutions are reset after tests complete +``` + +This is handled by the `inject_solutions_for_internal_tests` fixture in `tests/conftest.py`. + +## Build Isolation + +Deployment workflows ignore changes to: +- `src/assignments/` (assignment code) +- `scripts/` (solution management) +- `tests/` (test files) +- `private/` (solutions) +- `*.md` (documentation) + +This prevents unnecessary rebuilds when: +- Adding new assignments +- Updating tests +- Updating solutions +- Writing documentation + +Only changes to `app/`, `content/`, `components/`, etc. trigger deployment. + +## Security Checklist + +- [ ] Private repo is actually private (not public) +- [ ] `.gitignore` includes `private/` and `tests/internal/` +- [ ] `PUBLIC_REPO_TOKEN` secret is configured +- [ ] Sanitization script tested locally +- [ ] No `[SOLUTION]` markers in public repo +- [ ] Gold standards are in `tests/internal/fixtures/` +- [ ] Solution files use `*_solution.py` naming + +## Troubleshooting + +### Solutions not injecting + +**Problem**: `manage_solutions.py --inject` fails + +**Solution**: +1. Check solution files exist: `ls private/solutions/*_solution.py` +2. Verify naming convention: must end with `_solution.py` +3. Check target directory exists: `ls src/assignments/scratch-1/` + +### Tests can't import modules + +**Problem**: `ImportError` in tests + +**Solution**: +1. Check `conftest.py` adds correct paths to `sys.path` +2. Verify assignment directory structure +3. Try running from project root: `pytest tests/internal/ -v` + +### Sanitization not working + +**Problem**: Private content appears in public repo + +**Solution**: +1. Run sanitization locally: `bash scripts/sanitize.sh` +2. Check for errors in output +3. Verify `.gitignore` is correct +4. Review `sync-to-public.yml` workflow logs + +### Deployment triggered on code changes + +**Problem**: Website rebuilds when changing assignment code + +**Solution**: +1. Check `deploy.yml` and `deploy-staging.yml` +2. Verify `paths` and `paths-ignore` filters +3. Test with: `git push origin main` (should not trigger) + +## FAQ + +**Q: Can students see the private repo?** +A: No, it's a completely separate private repository. + +**Q: What if I accidentally commit a solution to public?** +A: Immediately revert the commit, run sanitization, force push to clean history. + +**Q: How do I add a new assignment?** +A: Create starter code, write solution in `private/solutions/`, write tests, tag with `release-`. + +**Q: Can I test sanitization without pushing?** +A: Yes! Run `bash scripts/sanitize.sh` locally, review changes, then `git reset --hard HEAD`. + +**Q: Do I need to manually sync to public?** +A: No, tagging with `release-*` automatically triggers sync via GitHub Actions. + +## Next Steps + +1. ✅ Private repo structure created +2. ✅ Solution management scripts working +3. ✅ Test infrastructure set up +4. ✅ Sanitization pipeline tested +5. ⏭️ Create private GitHub repository +6. ⏭️ Configure secrets (PUBLIC_REPO_TOKEN) +7. ⏭️ Test complete workflow end-to-end +8. ⏭️ Document for other instructors + +## Support + +For questions or issues with this infrastructure: +- Review this document +- Check `private/README.md` for solution-specific help +- Check `tests/README.md` for testing help +- Review GitHub Actions logs for sync issues diff --git a/QUICK_REFERENCE.md b/QUICK_REFERENCE.md new file mode 100644 index 00000000..eabb4067 --- /dev/null +++ b/QUICK_REFERENCE.md @@ -0,0 +1,245 @@ +# Quick Reference: Private Solution Architecture + +## Common Commands + +### Solution Management + +```bash +# List available solutions +python3 scripts/manage_solutions.py --list + +# Inject solutions for testing +python3 scripts/manage_solutions.py --inject scratch-1 + +# Reset to starter code +python3 scripts/manage_solutions.py --reset scratch-1 +``` + +### Running Tests + +```bash +# Install pytest (one time) +pip install pytest torch numpy + +# Run public tests (what students run) +pytest tests/public/ -v + +# Run internal tests (with auto solution injection) +pytest tests/internal/test_scratch1_rigor.py -v + +# Run specific test categories +pytest -m gradient -v # Gradient leak tests +pytest -m fidelity -v # Fidelity comparison tests +pytest -m training -v # Training convergence tests +``` + +### Releasing to Public + +```bash +# 1. Commit changes to private repo +git add . +git commit -m "Add/update assignment" +git push origin main + +# 2. Create release tag (triggers automatic sync) +git tag release-scratch-1 +git push origin release-scratch-1 + +# 3. GitHub Actions runs automatically: +# - Sanitizes code +# - Removes private/ and tests/internal/ +# - Pushes to public repo branch + +# 4. Review and merge in public repo +# - Go to https://github.com/arpg/vla-foundations +# - Review public-release-* branch +# - Create PR and merge +``` + +### Testing Sanitization + +```bash +# Test locally before releasing +git checkout -b test-sanitize +bash scripts/sanitize.sh +git status # Review what was removed +git diff # Review what was changed +git checkout main +git branch -D test-sanitize +``` + +## File Locations + +### Solutions +- `private/solutions/backbone_solution.py` - Complete implementation +- `private/solutions/checkpoints/` - Trained model weights + +### Tests +- `tests/public/` - Tests students can run +- `tests/internal/` - Internal grading tests (NEVER public) +- `tests/internal/fixtures/` - Gold standard reference data + +### Scripts +- `scripts/manage_solutions.py` - Inject/reset solutions +- `scripts/sanitize.sh` - Sanitize for public release +- `scripts/_sanitize_todos.py` - Remove solution hints + +### Workflows +- `.github/workflows/sync-to-public.yml` - Auto-sync on release tags +- `.github/workflows/deploy.yml` - Deploy production (path-filtered) +- `.github/workflows/deploy-staging.yml` - Deploy staging (path-filtered) + +## Solution File Naming + +Solutions must follow this pattern: +- `_solution.py` → maps to `src/assignments//.py` + +Examples: +- `backbone_solution.py` → `src/assignments/scratch-1/backbone.py` +- `generate_data_solution.py` → `src/assignments/scratch-1/generate_data.py` + +## TODO Comment Conventions + +Use `[SOLUTION]` markers for hints that should be removed: + +```python +# In starter code (private repo): +# TODO: [SOLUTION] Use torch.rsqrt for efficiency +result = None # Student implements this + +# After sanitization (public repo): +# TODO: Complete implementation +result = None +``` + +Inline solution comments: +```python +# In starter code (private repo): +result = torch.rsqrt(x) # [SOLUTION]: More efficient than 1/sqrt + +# After sanitization (public repo): +result = torch.rsqrt(x) +``` + +## Test Markers + +```python +# Public test +@pytest.mark.public +def test_basic_functionality(): + pass + +# Internal test +@pytest.mark.internal +@pytest.mark.gradient +def test_gradient_leak(): + pass +``` + +Available markers: +- `public` - Tests students can run +- `internal` - Internal grading tests +- `gradient` - Gradient flow validation +- `fidelity` - Output quality vs gold standard +- `training` - Training convergence +- `rigor` - Rigorous validation + +## Directory Structure + +``` +vla-foundations/ +├── private/ # NEVER public +│ ├── solutions/ # Complete implementations +│ └── README.md +├── tests/ +│ ├── public/ # Students can run +│ └── internal/ # NEVER public +│ ├── fixtures/ # Gold standards +│ └── test_*_rigor.py +├── scripts/ +│ ├── manage_solutions.py # Inject/reset +│ └── sanitize.sh # Sanitize for public +├── src/assignments/ +│ └── scratch-1/ +│ ├── backbone.py # Starter with TODOs +│ └── generate_data.py +└── .github/workflows/ + └── sync-to-public.yml # Auto-sync workflow +``` + +## Workflow + +1. **Develop** in private repo with solutions +2. **Test** with internal rigorous tests +3. **Tag** with `release-*` pattern +4. **Auto-sync** removes private content +5. **Review** public release branch +6. **Merge** to publish to students + +## Security + +**NEVER commit to public:** +- `private/` directory +- `tests/internal/` directory +- Files matching `*_solution.py` +- Gold standard fixtures +- `TODO: [SOLUTION]` comments + +**Always verify before public release:** +```bash +grep -r "\[SOLUTION\]" src/ content/ # Should find nothing +ls private/ # Should fail (directory deleted) +``` + +## Troubleshooting + +| Problem | Solution | +|---------|----------| +| Solutions not injecting | Check naming: `*_solution.py` | +| Tests can't import | Check `conftest.py` adds paths | +| Private content in public | Run `sanitize.sh`, verify output | +| Deployment on code change | Check `paths-ignore` in workflows | +| Test fixture not found | Generate gold standard first | + +## Setup with GitHub CLI + +**Quick setup (5 commands):** +```bash +# 1. Create private repo +gh repo create crheckman/private-vla-foundations --private --confirm + +# 2. Create PAT token (opens browser) +gh browse https://github.com/settings/tokens/new +# Select "repo" scope, copy token + +# 3. Add secret (paste token when prompted) +gh secret set PUBLIC_REPO_TOKEN --repo crheckman/private-vla-foundations + +# 4. Update remotes +git remote rename origin public +git remote add origin https://github.com/crheckman/private-vla-foundations.git + +# 5. Push +git push -u origin main staging +``` + +**Or use automated script:** +```bash +./scripts/setup_private_repo.sh +``` + +See **SETUP_WITH_GH_CLI.md** for detailed guide. + +## Next Steps + +1. ✅ Use GitHub CLI setup (see above) +2. Test solution management +3. Test complete workflow +4. Add more assignments + +## Full Documentation + +- `PRIVATE_REPO_SETUP.md` - Complete setup guide +- `private/README.md` - Solution management +- `tests/README.md` - Testing infrastructure +- `pytest.ini` - Test configuration diff --git a/QUICK_START_SSH.md b/QUICK_START_SSH.md new file mode 100644 index 00000000..c80b970a --- /dev/null +++ b/QUICK_START_SSH.md @@ -0,0 +1,97 @@ +# Quick Start: Manual SSH Setup + +If you want to get the review system running immediately without waiting for automated deployment: + +## SSH Commands + +```bash +# 1. SSH to your server +ssh crh@ristoffer.ch + +# 2. Navigate to staging directory +cd ~/vla-staging + +# 3. Pull latest code +git fetch origin staging +git reset --hard origin/staging + +# 4. Build Next.js site +npm install +npm run build + +# 5. Deploy static files +cp -r out/* /var/www/vlm-robotics.dev/public_html/staging/ + +# 6. Set up API server +cd ~/vla-staging/api-server +npm install + +# Kill any existing API server +pkill -f "node server.js" || true + +# Start API server in background +nohup node server.js > ~/vla-staging-api.log 2>&1 & + +# Note the PID +echo "API server started with PID $!" + +# 7. Configure Apache proxy (one-time setup) +# Edit your Apache config or create .htaccess: +sudo nano /etc/apache2/sites-available/vlm-robotics.dev.conf + +# Add these lines inside : +ProxyPass /api http://localhost:3001/api +ProxyPassReverse /api http://localhost:3001/api + +# Restart Apache +sudo systemctl restart apache2 + +# 8. Test API +curl http://localhost:3001/health +# Should return: {"status":"ok","timestamp":"..."} + +# 9. Test via Apache proxy +curl https://vlm-robotics.dev/api/comments/23 +# Should return comment data + +# 10. View the review interface +# Visit: https://vlm-robotics.dev/staging/textbook/audits/multimodality_audit?review=true +``` + +## Verify Everything Works + +```bash +# Check if API server is running +ps aux | grep "node server.js" + +# View API logs +tail -f ~/vla-staging-api.log + +# Test API endpoints +curl http://localhost:3001/health +curl http://localhost:3001/api/comments/23 + +# Check Apache proxy +curl https://vlm-robotics.dev/api/comments/23 +``` + +## Troubleshooting + +**API not responding:** +```bash +cd ~/vla-staging/api-server +pkill -f "node server.js" +nohup node server.js > ~/vla-staging-api.log 2>&1 & +``` + +**Check what's using port 3001:** +```bash +lsof -i :3001 +``` + +**View API logs:** +```bash +tail -50 ~/vla-staging-api.log +``` + +Once you've done this manual setup, future deployments will be automatic via GitHub Actions. diff --git a/README.md b/README.md new file mode 100644 index 00000000..a399bace --- /dev/null +++ b/README.md @@ -0,0 +1,398 @@ +# VLA Foundations + +Vision-Language-Action Foundations: A living textbook and course repository. + +**Live Site**: https://www.vlm-robotics.dev +**GitHub**: https://github.com/arpg/vla-foundations + +## Project Overview + +This repository serves as the source of truth for: + +1. **The Living Textbook**: An 8-chapter technical reference on VLAs for Robotics +2. **CSCI 7000 Course Portal**: Course logistics, assignments, and student contributions + +**Tech Stack**: Next.js 16, TypeScript, Tailwind CSS, MDX, Contentlayer + +## Repository Structure + +This repository is organized into three main categories: **Web Content** (rendered as pages), **Source Code** (executable assignments), and **Build Infrastructure** (deployment and tooling). + +``` +vla-foundations/ +├── app/ # Next.js App Router (web framework) +│ ├── page.tsx # Landing page +│ ├── textbook/[slug]/ # Dynamic chapter pages +│ ├── course/ # Course overview page +│ │ └── assignments/[slug]/ # Dynamic assignment pages +│ ├── contributors/[slug]/ # Dynamic contributor profile pages +│ └── reference/ # Reference implementations page +│ +├── content/ # All MDX content (rendered as web pages) +│ ├── textbook/ # 8-chapter VLA textbook (MDX files) +│ │ ├── foundations/ # Chapter 0: Core concepts +│ │ ├── architectures/ # Chapter 1: Model designs +│ │ ├── data/ # Chapter 2: Dataset construction +│ │ ├── training/ # Chapter 3: Optimization methods +│ │ ├── evaluation/ # Chapter 4: Metrics and benchmarks +│ │ ├── deployment/ # Chapter 5: Production systems +│ │ ├── applications/ # Chapter 6: Real-world use cases +│ │ └── future/ # Chapter 7: Open problems +│ │ +│ ├── course/ # Course materials (MDX files) +│ │ ├── Syllabus.mdx # Course syllabus +│ │ ├── assignments/ # Assignment specifications (instructor-written) +│ │ │ ├── scratch-0.mdx # Environment setup assignment +│ │ │ ├── scratch-1.mdx # Transformer backbone assignment +│ │ │ ├── paper-audit.mdx # Paper analysis assignment +│ │ │ └── capstone.mdx # Final project specification +│ │ └── submissions/ # Student submission reports (student-written) +│ │ └── scratch-1/ # Example: student reports for Scratch-1 +│ │ └── [student].mdx # Individual student writeups +│ │ +│ └── contributors/ # Contributor profiles (student-written) +│ └── [github-handle].mdx # One profile per contributor +│ +├── src/ # Executable source code (NOT rendered as web pages) +│ └── assignments/ # Assignment code templates and solutions +│ └── scratch-1/ # Example: Transformer implementation +│ ├── README.md # Minimal README (points to assignment page) +│ ├── backbone.py # Implementation template with TODOs +│ ├── generate_data.py # Dataset generator script +│ └── data/ # Generated training data +│ +├── components/ # React UI components +│ └── textbook/ # Textbook-specific components +│ ├── Sidebar.tsx # Navigation sidebar +│ └── TextbookLayout.tsx # Layout wrapper +│ +├── lib/ # Utility libraries +│ └── chapters.ts # Chapter metadata and utilities +│ +├── scripts/ # Deployment and automation +│ └── deploy.sh # Production deployment script +│ +├── .github/ # GitHub configuration +│ └── workflows/ +│ └── vla-audit.yml # CI/CD: PR validation, build checks +│ +├── next.config.ts # Next.js configuration +├── tailwind.config.ts # Tailwind CSS configuration +├── package.json # Node.js dependencies +└── README.md # This file +``` + +### Directory Purpose Guidelines + +**`content/`** - Source of truth for all web content +- Written in MDX (Markdown + JSX) +- Rendered as web pages on vlm-robotics.dev +- Instructor writes: textbook chapters, assignment specs, syllabus +- Students write: contributor profiles, submission reports + +**`src/`** - Executable code (Python, etc.) +- Assignment implementation templates +- Utility scripts and data generators +- NOT rendered as web pages +- READMEs are minimal and point to assignment pages (single source of truth) + +**`app/`** - Next.js routing and page components +- Defines URL structure and page layouts +- Connects routes to content in `content/` +- Modified when adding new page types or routes + +### Important: README Policy for `src/assignments/` + +**All READMEs in `src/assignments/` are intentionally minimal.** They contain only: +1. Link to the canonical assignment page on vlm-robotics.dev +2. Quick start commands +3. File list + +**Full assignment details (requirements, debugging tips, resources, submission checklists) are maintained exclusively in `content/course/assignments/*.mdx`.** This ensures a single source of truth and prevents documentation drift. + +## The 8-Chapter Textbook + +0. **Foundations** - Core concepts and problem formulation +1. **Architectures** - Model designs and network topologies +2. **Data** - Dataset construction and curation strategies +3. **Training** - Optimization and fine-tuning methods +4. **Evaluation** - Metrics and benchmarking protocols +5. **Deployment** - Production systems and scaling +6. **Applications** - Real-world use cases and case studies +7. **Future Directions** - Open problems and research frontiers + +## Development Workflow + +### Initial Setup + +```bash +# Clone the repository +git clone https://github.com/arpg/vla-foundations.git +cd vla-foundations + +# Install dependencies +pnpm install + +# Run development server +pnpm dev +``` + +Navigate to `http://localhost:3000` to see the site. + +### Adding Content + +#### New Textbook Section + +```bash +# Create a new MDX file in the appropriate chapter +touch content/textbook/[chapter-name]/new-section.mdx +``` + +```mdx +--- +title: "Section Title" +chapter: 1 +subsection: 5 +--- + +# Your Content Here + +Include LaTeX: $f(x) = x^2$ + +\`\`\`python +# Include code examples +def example(): + pass +\`\`\` +``` + +#### New Assignment + +```bash +touch content/course/assignments/assignment-name.mdx +``` + +### Building and Deploying + +#### Local Build + +```bash +# Build the static site +pnpm build + +# Preview the production build +pnpm start +``` + +#### Deploy to Production + +```bash +# Automated deployment to vlm-robotics.dev +./scripts/deploy.sh +``` + +This will: +1. Build the Next.js site locally +2. Sync to the remote server via rsync +3. Deploy to `https://www.vlm-robotics.dev` + +**Requirements**: SSH access with the automation key (`~/.ssh/id_ed25519_automation`) + +## Course Workflow + +### For Students + +**IMPORTANT**: All students must follow this workflow for assignment submissions. + +1. **Create your own branch**: + ```bash + git checkout -b assignment-name-yourname + ``` + Example: `git checkout -b scratch-1-johndoe` + +2. **Make your changes**: + - Add your code to `src/assignments/` + - Create your submission report in `content/course/submissions/` + - Update your contributor profile if needed + +3. **Commit your work**: + ```bash + git add . + git commit -m "Complete Assignment X: Your Name" + git push origin assignment-name-yourname + ``` + +4. **Open a Pull Request**: + - Go to https://github.com/arpg/vla-foundations + - Click "Pull requests" → "New pull request" + - **Base branch**: `staging` (NOT `main`) + - **Compare branch**: your branch name + - Title: `Assignment X: Your Name` + - Add a description of your work + +5. **Wait for CI checks** to pass (GitHub Actions will validate your submission) + +6. **Wait for instructor review**: + - **ONLY the instructor can merge pull requests** + - The instructor will review your code and report + - You may be asked to make changes + - Once approved, the instructor will merge to `staging`, then to `main` + +**You do NOT have permission to merge your own PRs. All merges are done by the instructor.** + +### For the Instructor + +1. **Review student PRs** on the `staging` branch +2. **Provide feedback** and request changes if needed +3. **Merge to `staging`** when approved +4. **Periodically merge `staging` to `main`** +5. **Deploy to production** using `./scripts/deploy.sh` + +## CI/CD Automation + +### GitHub Actions Workflow + +The `vla-audit.yml` workflow runs on all PRs to `staging` and `main`: + +- ✅ Contentlayer build validation +- ✅ MDX syntax checking +- ✅ LaTeX rendering verification +- ✅ Full site build + +**Location**: `.github/workflows/vla-audit.yml` + +### Branch Protection + +- `main`: Requires passing CI checks and instructor approval +- `staging`: Student PR target, requires passing CI + +## Branching Strategy + +- **`main`**: Production branch (deployed to live site) +- **`staging`**: Student PR target (integration testing) +- **Feature branches**: `feature/assignment-name`, `paper-audit-N-yourname` + +## Technologies + +### Core +- **Next.js 16**: Static site generation +- **TypeScript**: Type safety +- **Tailwind CSS**: Styling +- **MDX**: Markdown with JSX + +### Content Processing +- **Contentlayer**: Content validation +- **gray-matter**: Frontmatter parsing +- **remark-math** + **rehype-katex**: LaTeX rendering +- **remark-gfm**: GitHub-flavored Markdown + +### Deployment +- **Apache**: Web server on DigitalOcean +- **rsync**: File synchronization +- **SSH**: Secure remote access + +## Development Tools + +### Local Commands + +```bash +# Development +pnpm dev # Start dev server (hot reload) +pnpm build # Build production site +pnpm build-content # Validate content only +pnpm lint # Run ESLint + +# Deployment +./scripts/deploy.sh # Deploy to production +``` + +### Remote Server Access + +```bash +# SSH into production server +ssh -i ~/.ssh/id_ed25519_automation crh@ristoffer.ch + +# Navigate to project +cd /var/www/vlm-robotics.dev + +# Manual deployment (if needed) +npm run build +cp -r out/* public_html/ +``` + +## Contributing + +### Content Guidelines + +- **Technical accuracy**: Ensure all claims are well-supported +- **Clear writing**: Avoid jargon unless necessary +- **LaTeX formatting**: Use `$inline$` and `$$display$$` syntax +- **Code examples**: Include runnable code snippets +- **References**: Cite papers using numbered references + +### Code Guidelines + +- **TypeScript**: Use types for all functions +- **ESLint**: Follow the configured linting rules +- **Components**: Keep components small and focused +- **Naming**: Use descriptive variable and function names + +### Pull Request Process + +1. Create a descriptive branch name +2. Write clear commit messages +3. Ensure all CI checks pass +4. Request review from instructor +5. Address feedback and update PR +6. Merge when approved + +## Resources + +### Documentation +- [MDX Syntax](https://mdxjs.com/) +- [Next.js App Router](https://nextjs.org/docs/app) +- [Tailwind CSS](https://tailwindcss.com/docs) +- [LaTeX Math Symbols](https://www.overleaf.com/learn/latex/List_of_Greek_letters_and_math_symbols) + +### Papers & Datasets +- [RT-1 Paper](https://arxiv.org/abs/2212.06817) +- [RT-2 Paper](https://arxiv.org/abs/2307.15818) +- [Open-X Embodiment](https://robotics-transformer-x.github.io/) +- [DROID Dataset](https://droid-dataset.github.io/) + +## Instructor TODO List + +**Course Content Completion Tasks**: + +- [ ] **Scratch-0 Assignment**: Create full assignment specification in `content/course/assignments/scratch-0.mdx` +- [ ] **Scratch-1 Assignment**: Create full assignment specification in `content/course/assignments/scratch-1.mdx` +- [ ] **Paper Audit Assignment**: Create full assignment specification in `content/course/assignments/paper-audit.mdx` +- [ ] **Capstone Assignment**: Create full assignment specification in `content/course/assignments/capstone.mdx` +- [ ] **Update /course page**: Link assignments once content is ready (remove "Coming soon" placeholders) +- [ ] **Syllabus**: Upload current syllabus to Canvas and verify link works +- [ ] **Textbook Chapters**: Begin writing content for 8 chapters +- [ ] **Example Paper Audit**: Create sample audit for students to reference +- [ ] **Setup Branch Protection**: Configure GitHub branch protection rules (students require PRs, instructor can bypass) + +**Deployment**: +- [ ] Test assignment submission workflow end-to-end +- [ ] Verify CI/CD pipeline catches common errors +- [ ] Create assignment grading rubric + +**Notes**: +- Syllabus is currently linked to Canvas: https://canvas.colorado.edu/courses/134529/files/82424359/download?download_frd=1 +- Students must submit 1 paper audit (not 4) +- Capstone tracks: Research or Engineering (no survey track) + +## Contact + +- **Instructor**: Christoffer Heckman +- **Email**: christoffer.heckman@colorado.edu +- **Course**: CSCI 7000, Spring 2026 +- **GitHub**: https://github.com/arpg/vla-foundations + +## License + +Copyright © 2026 Christoffer Heckman. All rights reserved. + +Course materials are for educational use by enrolled students only. diff --git a/REVIEW_SYSTEM.md b/REVIEW_SYSTEM.md new file mode 100644 index 00000000..014badd3 --- /dev/null +++ b/REVIEW_SYSTEM.md @@ -0,0 +1,132 @@ +# Student Paper Audit Review System + +## Overview + +This system enables instructors to review student paper audits with inline commenting on rendered pages. Comments persist across student revisions and are stored in the git repository. + +## Architecture + +### Components + +1. **Audit Pages** (`/textbook/audits/[slug]`) + - Renders student paper audits from MDX files + - Located in `content/textbook/audits/` + - Supports both public view and instructor review mode + +2. **Review Mode** (`/textbook/audits/[slug]?review=true`) + - Adds commenting sidebar for instructor feedback + - Comments tied to PR numbers for version tracking + - Visual interface for adding/resolving comments + +3. **Comments API** (`/api/comments/`) + - RESTful API for managing comments + - Comments stored in `database/comments/{pr-number}.json` + - Persists in git repository for audit trail + +4. **Staging Deployment** + - Staging branch deploys to `vlm-robotics.dev/staging/` + - Automatic deployment on push to `staging` branch + - Allows review before merging to production + +## Workflow + +### For Students: + +1. Create paper audit in `content/textbook/audits/{topic}_audit.mdx` +2. Add frontmatter with metadata: + ```yaml + --- + title: 'Your Audit Title' + author: 'your-github-username' + prNumber: XX + --- + ``` +3. Submit PR to `staging` branch +4. Wait for instructor review +5. Address comments and push updates +6. PR merged to `main` when approved + +### For Instructors: + +1. Student submits PR to `staging` branch +2. Merge PR to `staging` (triggers auto-deploy) +3. Visit `vlm-robotics.dev/staging/textbook/audits/{slug}?review=true` +4. Add comments using the sidebar: + - Select section (Introduction, Architecture, etc.) + - Write feedback + - Comments automatically saved +5. Student sees comments, makes revisions +6. Mark comments as resolved as student addresses them +7. When satisfied, merge staging → main + +## File Structure + +``` +vla-foundations/ +├── app/ +│ ├── textbook/audits/ +│ │ ├── [slug]/page.tsx # Individual audit page +│ │ └── page.tsx # Audits index page +│ └── api/comments/ +│ └── [prNumber]/ +│ ├── route.ts # GET/POST comments +│ └── [commentId]/route.ts # PUT/DELETE comment +├── components/audit/ +│ ├── AuditLayout.tsx # Layout with comment sidebar +│ └── CommentSidebar.tsx # Comment UI component +├── content/textbook/audits/ +│ └── *.mdx # Student audit submissions +├── database/comments/ +│ └── {pr-number}.json # Comments for each PR +└── lib/ + └── audits.ts # Audit data management +``` + +## Comment Data Structure + +Comments are stored in JSON files: + +```json +{ + "prNumber": 23, + "auditSlug": "multimodality_audit", + "comments": [ + { + "id": "uuid", + "sectionId": "introduction", + "text": "Great start! Consider expanding on the architectural implications.", + "author": "instructor", + "timestamp": "2026-01-21T...", + "resolved": false + } + ] +} +``` + +## Deployment + +### Staging +- **Trigger**: Push to `staging` branch +- **URL**: `vlm-robotics.dev/staging/` +- **Purpose**: Review student work before production + +### Production +- **Trigger**: Push to `main` branch +- **URL**: `vlm-robotics.dev/` +- **Purpose**: Published course content + +## API Endpoints + +- `GET /api/comments/{prNumber}` - Fetch all comments for a PR +- `POST /api/comments/{prNumber}` - Add new comment +- `PUT /api/comments/{prNumber}/{commentId}` - Update comment (mark resolved) +- `DELETE /api/comments/{prNumber}/{commentId}` - Delete comment + +## Future Enhancements + +- [ ] Authentication for instructor-only access +- [ ] Email notifications when comments are added +- [ ] Auto-generate section IDs from headings +- [ ] Comment threading/replies +- [ ] Rich text formatting in comments +- [ ] Export comments to PDF for grading records diff --git a/SETUP_WITH_GH_CLI.md b/SETUP_WITH_GH_CLI.md new file mode 100644 index 00000000..29ff577e --- /dev/null +++ b/SETUP_WITH_GH_CLI.md @@ -0,0 +1,328 @@ +# Setup Using GitHub CLI (`gh`) + +This guide shows you how to set up the private repository using only the GitHub CLI. + +## Prerequisites + +```bash +# Check gh is installed +gh --version + +# Login if needed +gh auth login +``` + +## Quick Setup (Copy & Paste) + +### 1. Create Private Repository + +```bash +# Set your repository name and owner +REPO_NAME="private-vla-foundations" +REPO_OWNER="crheckman" # or your GitHub username/org + +# Create private repo +gh repo create "$REPO_OWNER/$REPO_NAME" \ + --private \ + --description "Private solutions and internal tests for VLA Foundations" \ + --confirm + +echo "✓ Created https://github.com/$REPO_OWNER/$REPO_NAME" +``` + +### 2. Create Personal Access Token + +```bash +# Open token creation page in browser +gh browse https://github.com/settings/tokens/new + +# Instructions: +# 1. Note: "VLA Sync Token $(date +%Y-%m-%d)" +# 2. Expiration: 90 days (or your preference) +# 3. Scopes: Check ☑ "repo" (Full control) +# 4. Click "Generate token" +# 5. Copy the token (starts with ghp_ or github_pat_) +``` + +### 3. Add Secret to Repository + +```bash +# Method A: Use helper script +./scripts/add_github_secret.sh "$REPO_OWNER/$REPO_NAME" +# Follow prompts to paste your PAT token + +# Method B: Manual command +gh secret set PUBLIC_REPO_TOKEN --repo "$REPO_OWNER/$REPO_NAME" +# Paste your PAT when prompted + +# Verify secret was added +gh secret list --repo "$REPO_OWNER/$REPO_NAME" +``` + +### 4. Update Git Remotes + +```bash +# Rename current origin to public (if pointing to arpg/vla-foundations) +git remote rename origin public + +# Add private repo as new origin +git remote add origin "https://github.com/$REPO_OWNER/$REPO_NAME.git" + +# Verify remotes +git remote -v +# Should show: +# origin → crheckman/private-vla-foundations (private) +# public → arpg/vla-foundations (public) +``` + +### 5. Push to Private Repository + +```bash +# Push main branch +git push -u origin main + +# Push staging branch (if it exists) +git push -u origin staging + +# View your repo +gh repo view "$REPO_OWNER/$REPO_NAME" --web +``` + +## Complete Automated Setup + +Or use the automated script: + +```bash +# Run automated setup script +./scripts/setup_private_repo.sh + +# This will: +# - Create private repository +# - Guide you through token creation +# - Add secret to repository +# - Update git remotes +# - Push branches +``` + +## Verification + +```bash +# 1. Check repository exists +gh repo view "$REPO_OWNER/$REPO_NAME" + +# 2. Check secret exists +gh secret list --repo "$REPO_OWNER/$REPO_NAME" +# Should show: PUBLIC_REPO_TOKEN + +# 3. Check remotes +git remote -v +# Should show both origin (private) and public + +# 4. View repo in browser +gh repo view "$REPO_OWNER/$REPO_NAME" --web +``` + +## Test the Workflow + +### Test Solution Management + +```bash +# List solutions +python3 scripts/manage_solutions.py --list + +# Inject solutions +python3 scripts/manage_solutions.py --inject scratch-1 + +# Check injection worked +ls -la src/assignments/scratch-1/*.backup.py + +# Reset to starter code +python3 scripts/manage_solutions.py --reset scratch-1 +``` + +### Test Sanitization (Safe) + +```bash +# Create test branch +git checkout -b test-sanitize + +# Run sanitization +bash scripts/sanitize.sh + +# Review what was removed +git status +git diff + +# Check for leaks +grep -r "\[SOLUTION\]" src/ content/ # Should find nothing +ls private/ # Should fail - directory deleted + +# Reset +git checkout main +git branch -D test-sanitize +``` + +### Test Release Sync + +```bash +# Create test release tag +git tag release-scratch-1-test +git push origin release-scratch-1-test + +# Watch GitHub Actions run +gh run watch --repo "$REPO_OWNER/$REPO_NAME" + +# View the workflow in browser +gh repo view "$REPO_OWNER/$REPO_NAME" --web +# Click "Actions" tab + +# Check public repo for new branch +gh repo view arpg/vla-foundations --web +# Look for branch: public-release-scratch-1-test + +# Clean up test tag +git tag -d release-scratch-1-test +git push origin :refs/tags/release-scratch-1-test +``` + +## Install Testing Dependencies + +```bash +# Install pytest and dependencies +pip install pytest torch numpy + +# Run public tests +pytest tests/public/ -v + +# Run internal tests (auto-injects solutions) +pytest tests/internal/ -v + +# Run specific test categories +pytest -m gradient -v +pytest -m fidelity -v +``` + +## Managing Secrets + +```bash +# List secrets +gh secret list --repo "$REPO_OWNER/$REPO_NAME" + +# Add/update a secret +gh secret set SECRET_NAME --repo "$REPO_OWNER/$REPO_NAME" + +# Delete a secret +gh secret delete SECRET_NAME --repo "$REPO_OWNER/$REPO_NAME" +``` + +## Troubleshooting + +### Token Creation + +If you need to create a token with specific scopes via CLI: + +```bash +# This requires gh extension +gh extension install github/gh-token + +# Create token (requires confirmation) +gh token create --scopes repo --note "VLA Sync $(date +%Y-%m-%d)" +``` + +### Secret Not Working + +```bash +# Check secret exists +gh secret list --repo "$REPO_OWNER/$REPO_NAME" + +# Re-add the secret +gh secret set PUBLIC_REPO_TOKEN --repo "$REPO_OWNER/$REPO_NAME" +# Paste token when prompted + +# Test with a dummy workflow run +gh workflow run sync-to-public.yml --repo "$REPO_OWNER/$REPO_NAME" +``` + +### Remote Issues + +```bash +# List remotes +git remote -v + +# Fix public remote +git remote set-url public https://github.com/arpg/vla-foundations.git + +# Fix origin remote +git remote set-url origin "https://github.com/$REPO_OWNER/$REPO_NAME.git" +``` + +## Useful gh Commands + +```bash +# View repo info +gh repo view + +# View repo in browser +gh repo view --web + +# List workflows +gh workflow list + +# View workflow runs +gh run list + +# Watch a workflow run +gh run watch + +# View secrets +gh secret list + +# View repo settings in browser +gh browse --settings + +# Clone your private repo (from elsewhere) +gh repo clone "$REPO_OWNER/$REPO_NAME" +``` + +## Environment Variables + +For convenience, add to your `~/.bashrc` or `~/.zshrc`: + +```bash +export VLA_PRIVATE_REPO="crheckman/private-vla-foundations" +export VLA_PUBLIC_REPO="arpg/vla-foundations" + +# Then use: +gh secret list --repo "$VLA_PRIVATE_REPO" +gh repo view "$VLA_PRIVATE_REPO" --web +``` + +## Next Steps + +Once setup is complete: + +1. **Read documentation**: + - `PRIVATE_REPO_SETUP.md` - Complete guide + - `QUICK_REFERENCE.md` - Command cheat sheet + +2. **Test workflow end-to-end**: + - Inject solution + - Run internal tests + - Create release tag + - Watch sync to public + - Review public release branch + +3. **Add more assignments**: + - Create solution in `private/solutions/` + - Write internal tests in `tests/internal/` + - Tag with `release-` + +## Support + +For issues with GitHub CLI: +- Documentation: https://cli.github.com/manual/ +- Issues: https://github.com/cli/cli/issues + +For issues with this setup: +- See `PRIVATE_REPO_SETUP.md` troubleshooting section +- Check GitHub Actions logs: `gh run list --repo "$REPO_OWNER/$REPO_NAME"` diff --git a/SYSTEM_COMPLETE.md b/SYSTEM_COMPLETE.md new file mode 100644 index 00000000..66e08aba --- /dev/null +++ b/SYSTEM_COMPLETE.md @@ -0,0 +1,237 @@ +# Student Paper Audit Review System - COMPLETE ✅ + +## System Status: FULLY OPERATIONAL + +The student paper audit review system is fully deployed at http://vlm-robotics.dev/staging/ with complete textbook styling integration. + +## Features + +### 1. Consistent Styling with Textbook Pages +- **Left Sidebar**: Chapter navigation (Foundations, Architectures, Data, etc.) +- **Main Content**: Full-width article with MDX rendering and LaTeX support +- **Right Sidebar**: + - Table of Contents placeholder (normal view) + - Review Comments interface (review mode with `?review=true`) + +### 2. Audit Pages + +**Normal View**: http://vlm-robotics.dev/staging/textbook/audits/multimodality_audit/ +- Matches textbook page styling exactly +- Left navigation sidebar +- Right TOC sidebar +- Professional academic layout + +**Review Mode**: http://vlm-robotics.dev/staging/textbook/audits/multimodality_audit/?review=true +- Same left navigation +- **Right sidebar becomes comment interface**: + - PR #23 badge + - Section dropdown (General, Introduction, Architecture, Evaluation, Conclusion) + - Comment textarea + - "Add Comment" button + - Live comment list with resolve/unresolve functionality + - Floating comment toggle button (bottom right corner) + +### 3. Working API Routes +- `GET /api/comments/[prNumber]/` - Fetch all comments +- `POST /api/comments/[prNumber]/` - Add new comment +- `PUT /api/comments/[prNumber]/[commentId]/` - Update comment (mark resolved/unresolved) +- `DELETE /api/comments/[prNumber]/[commentId]/` - Delete comment + +**Test**: http://vlm-robotics.dev/staging/api/comments/23/ returns JSON with 2 demo comments + +### 4. Demo Content +PR #23 has example audit from gyanigkali with 2 demo comments: +- Comment on Introduction section +- Comment on Architecture section + +## Your Review Workflow + +### When a Student Submits an Audit: + +1. **Student creates PR to `staging`** + ```bash + gh pr list --base staging + ``` + +2. **Merge to staging** + ```bash + gh pr merge [PR-NUMBER] --merge + ``` + +3. **Deploy to server** + ```bash + ssh crh@ristoffer.ch + cd ~/vla-staging + git pull origin staging + npm run build + kill -9 $(ps aux | grep 'next-server' | grep -v grep | awk '{print $2}') + nohup npm start -- -p 3002 > ~/vla-staging-server.log 2>&1 & + ``` + +4. **Review the audit** + - Visit: `http://vlm-robotics.dev/staging/textbook/audits/[slug]/?review=true` + - Read the audit in the main content area + - Use the right sidebar to: + - Select section from dropdown + - Type your comment + - Click "Add Comment" + - Comments save automatically to `database/comments/[pr-number].json` + +5. **Student revises** + - Student sees comments at the same review URL + - Student updates their PR + - You pull changes and repeat review + +6. **Approve and publish** + ```bash + git checkout main + git merge staging + git push origin main + ``` + +## Technical Architecture + +### Page Layout Structure +``` +┌─────────────┬──────────────────────┬─────────────────┐ +│ Sidebar │ Main Content │ Right Sidebar │ +│ │ │ │ +│ Foundations │ # Audit Title │ Normal: │ +│ Architectures│ │ - TOC │ +│ Data │ MDX content with │ │ +│ Training │ LaTeX math │ Review Mode: │ +│ Evaluation │ │ - Comments │ +│ ... │ │ - Add Comment │ +│ │ │ - PR Badge │ +└─────────────┴──────────────────────┴─────────────────┘ +``` + +### Component Hierarchy +- `app/textbook/audits/[slug]/page.tsx` - Server component, fetches data + - `components/audit/AuditLayout.tsx` - Client component, handles layout + - `components/textbook/Sidebar.tsx` - Left navigation + - Main `
` - MDX content + - `components/audit/CommentSidebar.tsx` - Right sidebar (review mode) + +### Data Flow +``` +User visits ?review=true + ↓ +Server: page.tsx passes isReviewMode={true} + ↓ +Client: AuditLayout renders CommentSidebar + ↓ +Client: CommentSidebar fetches /api/comments/23/ + ↓ +Server: API route reads database/comments/23.json + ↓ +Client: Renders comments in sidebar + ↓ +User adds comment → POST /api/comments/23/ + ↓ +Server: Appends to JSON file, returns new comment + ↓ +Client: Updates UI with new comment +``` + +## File Structure + +### Server (~/vla-staging/) +``` +app/ +├── textbook/audits/ +│ ├── page.tsx # Audits index +│ └── [slug]/page.tsx # Individual audit pages +├── api/comments/ +│ ├── [prNumber]/route.ts # GET/POST comments +│ └── [prNumber]/[commentId]/route.ts # PUT/DELETE comment + +components/ +├── audit/ +│ ├── AuditLayout.tsx # Page layout with sidebar switching +│ └── CommentSidebar.tsx # Comment UI +└── textbook/ + └── Sidebar.tsx # Left navigation (shared with textbook) + +content/textbook/audits/ +└── multimodality_audit.mdx # Example audit + +database/comments/ +└── 23.json # Comments for PR 23 + +lib/ +└── audits.ts # Audit metadata utilities +``` + +### Apache Configuration +```apache +ProxyPass /staging/ http://localhost:3002/ +ProxyPassReverse /staging/ http://localhost:3002/ +``` + +### Next.js Configuration +```typescript +// next.config.ts +{ + // Dynamic mode (no static export) + trailingSlash: true, + images: { unoptimized: true } +} +``` + +## Server Management + +**Check Status:** +```bash +ssh crh@ristoffer.ch "ps aux | grep next-server | grep -v grep" +``` + +**View Logs:** +```bash +ssh crh@ristoffer.ch "tail -f ~/vla-staging-server.log" +``` + +**Restart Server:** +```bash +ssh crh@ristoffer.ch "cd ~/vla-staging && kill -9 \$(ps aux | grep 'next-server' | grep -v grep | awk '{print \$2}') && nohup npm start -- -p 3002 > ~/vla-staging-server.log 2>&1 &" +``` + +**Test API:** +```bash +curl http://vlm-robotics.dev/staging/api/comments/23/ +``` + +## System Verification + +All components tested and operational: +- ✅ Left sidebar navigation (matches textbook) +- ✅ Main content with MDX + LaTeX rendering +- ✅ Right sidebar switches between TOC and Comments +- ✅ Review mode activates with `?review=true` +- ✅ Comment form functional +- ✅ API routes returning JSON +- ✅ Comment storage working +- ✅ Demo comments visible +- ✅ Floating toggle button (bottom right) +- ✅ Server healthy and running + +## What Changed + +### From Previous Version: +1. **Added left sidebar navigation** - Now matches textbook pages exactly +2. **Improved styling consistency** - Uses same prose classes as textbook +3. **Right sidebar dual-purpose** - TOC in normal view, comments in review mode +4. **Better visual integration** - Audits feel like part of the textbook + +### Final Fixes Applied: +1. Updated `AuditLayout.tsx` to include `Sidebar` component +2. Fixed TypeScript interface to use `chapter` instead of `order` +3. Passed `chapters` prop from server to client component +4. Updated `CommentSidebar.tsx` styling to match TOC sidebar + +## Ready for Use! 🎉 + +The system is production-ready. Visit the review URL to test: +http://vlm-robotics.dev/staging/textbook/audits/multimodality_audit/?review=true + +Students can now submit paper audits, and you can review them with inline comments in a professional academic interface that matches your textbook styling. diff --git a/app/contributors/[slug]/page.tsx b/app/contributors/[slug]/page.tsx new file mode 100644 index 00000000..505c1c2b --- /dev/null +++ b/app/contributors/[slug]/page.tsx @@ -0,0 +1,109 @@ +import Link from "next/link"; +import { notFound } from "next/navigation"; +import fs from "fs"; +import path from "path"; +import { MDXRemote } from "next-mdx-remote/rsc"; +import remarkGfm from "remark-gfm"; + +interface PageProps { + params: Promise<{ slug: string }>; +} + +export async function generateStaticParams() { + const contributorsDir = path.join(process.cwd(), "content", "contributors"); + + if (!fs.existsSync(contributorsDir)) { + return []; + } + + const files = fs.readdirSync(contributorsDir) + .filter(file => file.endsWith(".mdx") && !file.startsWith("_")); + + return files.map(file => ({ + slug: file.replace(".mdx", ""), + })); +} + +export async function generateMetadata({ params }: PageProps) { + const { slug } = await params; + const filePath = path.join(process.cwd(), "content", "contributors", `${slug}.mdx`); + + if (!fs.existsSync(filePath)) { + return { title: "Contributor Not Found" }; + } + + const matter = await import("gray-matter"); + const fileContents = fs.readFileSync(filePath, "utf8"); + const { data } = matter.default(fileContents); + + return { + title: `${data.name || slug} - VLA Foundations`, + description: `Contributor profile for ${data.name || slug}`, + }; +} + +export default async function ContributorProfilePage({ params }: PageProps) { + const { slug } = await params; + const filePath = path.join(process.cwd(), "content", "contributors", `${slug}.mdx`); + + if (!fs.existsSync(filePath)) { + notFound(); + } + + const matter = await import("gray-matter"); + const fileContents = fs.readFileSync(filePath, "utf8"); + const { data, content } = matter.default(fileContents); + + return ( +
+
+ + ← Back to Contributors + + + {/* Profile Header */} +
+

+ {data.name || slug} +

+
+ {data.role && ( + + {data.role} + + )} + {data.semester && ( + {data.semester} + )} +
+
+ + {/* GitHub Link */} + {data.github && ( + + )} + + {/* MDX Content */} +
+ +
+
+
+ ); +} diff --git a/app/contributors/page.tsx b/app/contributors/page.tsx new file mode 100644 index 00000000..3d036ca5 --- /dev/null +++ b/app/contributors/page.tsx @@ -0,0 +1,107 @@ +import Link from "next/link"; +import fs from "fs"; +import path from "path"; +import matter from "gray-matter"; + +interface Contributor { + name: string; + role: string; + semester: string; + github: string; + slug: string; +} + +function getAllContributors(): Contributor[] { + const contributorsDir = path.join(process.cwd(), "content", "contributors"); + + if (!fs.existsSync(contributorsDir)) { + return []; + } + + const files = fs.readdirSync(contributorsDir) + .filter(file => file.endsWith(".mdx") && !file.startsWith("_")); + + const contributors = files.map(file => { + const filePath = path.join(contributorsDir, file); + const fileContents = fs.readFileSync(filePath, "utf8"); + const { data } = matter(fileContents); + + return { + name: data.name || "Unknown", + role: data.role || "Student", + semester: data.semester || "", + github: data.github || "", + slug: file.replace(".mdx", ""), + }; + }); + + // Sort: instructors first, then by name + return contributors.sort((a, b) => { + if (a.role === "Instructor" && b.role !== "Instructor") return -1; + if (a.role !== "Instructor" && b.role === "Instructor") return 1; + return a.name.localeCompare(b.name); + }); +} + +export default function ContributorsPage() { + const contributors = getAllContributors(); + + return ( +
+
+ + ← Back to Home + + +

+ Contributors +

+

+ Students and instructors contributing to the VLA Foundations textbook. +

+ + {contributors.length === 0 ? ( +
+

No contributors yet. Be the first to submit!

+
+ ) : ( +
+ {contributors.map((contributor) => ( + +
+
+

+ {contributor.name} +

+ {contributor.role === "Instructor" && ( + + Instructor + + )} +
+ +
+ {contributor.semester && ( +

+ {contributor.semester} +

+ )} + {contributor.github && ( +

+ @{contributor.github} +

+ )} +
+
+ + ))} +
+ )} +
+
+ ); +} diff --git a/app/course/assignments/[slug]/page.tsx b/app/course/assignments/[slug]/page.tsx new file mode 100644 index 00000000..9d92bbe0 --- /dev/null +++ b/app/course/assignments/[slug]/page.tsx @@ -0,0 +1,111 @@ +import Link from "next/link"; +import { notFound } from "next/navigation"; +import fs from "fs"; +import path from "path"; +import { MDXRemote } from "next-mdx-remote/rsc"; +import remarkMath from "remark-math"; +import rehypeKatex from "rehype-katex"; +import remarkGfm from "remark-gfm"; + +interface PageProps { + params: Promise<{ slug: string }>; +} + +export async function generateStaticParams() { + const assignmentsDir = path.join(process.cwd(), "content", "course", "assignments"); + + if (!fs.existsSync(assignmentsDir)) { + return []; + } + + const files = fs.readdirSync(assignmentsDir) + .filter(file => file.endsWith(".mdx")); + + return files.map(file => ({ + slug: file.replace(".mdx", ""), + })); +} + +export async function generateMetadata({ params }: PageProps) { + const { slug } = await params; + const filePath = path.join(process.cwd(), "content", "course", "assignments", `${slug}.mdx`); + + if (!fs.existsSync(filePath)) { + return { title: "Assignment Not Found" }; + } + + const matter = await import("gray-matter"); + const fileContents = fs.readFileSync(filePath, "utf8"); + const { data } = matter.default(fileContents); + + return { + title: `${data.title || slug} - VLA Foundations`, + description: data.description || `Assignment: ${data.title || slug}`, + }; +} + +export default async function AssignmentPage({ params }: PageProps) { + const { slug } = await params; + const filePath = path.join(process.cwd(), "content", "course", "assignments", `${slug}.mdx`); + + if (!fs.existsSync(filePath)) { + notFound(); + } + + const matter = await import("gray-matter"); + const fileContents = fs.readFileSync(filePath, "utf8"); + const { data, content } = matter.default(fileContents); + + return ( +
+
+ + ← Back to Course + + + {/* Assignment Header */} +
+

+ {data.title || slug} +

+ +
+ {data.due && ( + + + + + Due: {data.due} + + )} + {data.points && ( + + {data.points} points + + )} +
+
+ + {/* MDX Content with KaTeX support */} +
+ +
+ + {/* Back to course link at bottom */} +
+ + ← Back to Course + +
+
+
+ ); +} diff --git a/app/course/page.tsx b/app/course/page.tsx new file mode 100644 index 00000000..292b0a5c --- /dev/null +++ b/app/course/page.tsx @@ -0,0 +1,111 @@ +import Link from "next/link"; + +export default function CoursePage() { + return ( +
+
+ + ← Back to Home + + +

+ CSCI 7000: VLA Foundations for Robotics +

+

+ Spring 2026 • Instructor: Christoffer Heckman +

+ +
+ {/* Syllabus */} +
+

Course Materials

+
+

Syllabus

+

+ Complete course information, grading policy, and schedule. +

+ + View Syllabus on Canvas → + +
+
+ + {/* Assignments */} +
+

Assignments

+
+
+

Scratch-0: Environment Setup

+

+ Set up your development environment and submit your first PR. +

+ + View Assignment → + +
+ +
+

Scratch-1: Transformer Backbone

+

+ Implement a decoder-only Transformer from scratch for robotic trajectories. +

+ + View Assignment → + +
+ +
+

Paper Audit

+

+ Critical analysis of VLA research papers (1 required). +

+
+ + View Assignment → + + + View Student Audits → + +
+
+ +
+

Capstone Project

+

+ Textbook contribution with implementation (research or engineering track). +

+ + View Assignment → + +
+
+
+ + {/* Repository */} +
+

Course Repository

+
+

GitHub Repository

+

+ All assignments must be submitted via pull request to the course repository. +

+ + View on GitHub → + +
+
+
+
+
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Geist, Geist_Mono } from "next/font/google"; +import "./globals.css"; +import "katex/dist/katex.min.css"; + +const geistSans = Geist({ + variable: "--font-geist-sans", + subsets: ["latin"], +}); + +const geistMono = Geist_Mono({ + variable: "--font-geist-mono", + subsets: ["latin"], +}); + +export const metadata: Metadata = { + title: "VLA Stack - Vision-Language-Action for Robotics", + description: "A living textbook on the foundational building blocks of Vision-Language Models in Robotics", +}; + +export default function RootLayout({ + children, +}: Readonly<{ + children: React.ReactNode; +}>) { + return ( + + + {children} + + + ); +} diff --git a/app/page.tsx b/app/page.tsx new file mode 100644 index 00000000..bddaa382 --- /dev/null +++ b/app/page.tsx @@ -0,0 +1,240 @@ +import Link from "next/link"; + +export default function Home() { + return ( +
+ {/* Header */} +
+
+
+

VLA Stack

+

Vision-Language-Action for Robotics

+
+ +
+
+ + {/* Hero Section */} +
+
+

+ The Vision-Language-Action Stack +

+

+ A living reference of foundational architectures, rigorous validation strategies, + and deploying robot foundation models. +

+
+ + Read the Living Textbook + + + View Course Materials + +
+
+ + {/* VLA Control Loop Visualization */} +
+

+ The VLA Control Loop +

+ +
+ {/* Perception */} +
+
+ + + + +
+
s ∈ S
+

Perception

+

Scene Encoding

+
+ + {/* Arrow */} +
+ + + +
+ + {/* VLM Backbone */} +
+
+ + + +
+
P(a|s,l)
+

VLM Backbone

+

Reasoning

+
+ + {/* Arrow */} +
+ + + +
+ + {/* Action */} +
+
+ + + +
+
a ∈ A
+

Action

+

Control Policies

+
+
+ + {/* Formula */} +
+
+ a* = arg maxa P(a | s, l) +
+
+
+
+ + {/* Textbook Structure */} +
+

+ 8-Chapter Living Textbook +

+ +
+ +
+
CHAPTER 0
+

+ Foundations +

+

+ Core concepts and problem formulation +

+
+ + + +
+
CHAPTER 1
+

+ Architectures +

+

+ Model designs and network topologies +

+
+ + + +
+
CHAPTER 2
+

+ Data +

+

+ Dataset construction and curation +

+
+ + + +
+
CHAPTER 3
+

+ Training +

+

+ Optimization and learning methods +

+
+ + + +
+
CHAPTER 4
+

+ Evaluation +

+

+ Metrics and benchmarking protocols +

+
+ + + +
+
CHAPTER 5
+

+ Deployment +

+

+ Production systems and scaling +

+
+ + + +
+
CHAPTER 6
+

+ Applications +

+

+ Real-world use cases +

+
+ + + +
+
CHAPTER 7
+

+ Future Directions +

+

+ Open problems and frontiers +

+
+ +
+
+ + {/* Footer */} +
+
+
+

A reference for VLA systems.

+

© 2025 Chris Heckman

+
+
+
+
+ ); +} diff --git a/app/reference/page.tsx b/app/reference/page.tsx new file mode 100644 index 00000000..fb16bdcf --- /dev/null +++ b/app/reference/page.tsx @@ -0,0 +1,31 @@ +import Link from "next/link"; + +export default function ReferencePage() { + return ( +
+
+
+ + ← Back to Home + +
+
+ +
+

+ Reference Implementations +

+

+ Practical implementations and validation frameworks for production VLA systems. +

+ +
+

+ This section will contain reference implementations demonstrating rigorous validation + and production-grade patterns for Vision-Language-Action systems. +

+
+
+
+ ); +} diff --git a/app/textbook/[slug]/page.tsx b/app/textbook/[slug]/page.tsx new file mode 100644 index 00000000..84a87012 --- /dev/null +++ b/app/textbook/[slug]/page.tsx @@ -0,0 +1,69 @@ +import { TextbookLayout } from '@/components/textbook/TextbookLayout'; +import { getAllChapters, getChapterBySlug } from '@/lib/chapters'; +import { notFound } from 'next/navigation'; +import fs from 'fs'; +import path from 'path'; +import { MDXRemote } from 'next-mdx-remote/rsc'; +import remarkMath from 'remark-math'; +import rehypeKatex from 'rehype-katex'; +import remarkGfm from 'remark-gfm'; + +interface PageProps { + params: Promise<{ slug: string }>; +} + +export async function generateStaticParams() { + const chapters = getAllChapters(); + return chapters.map((chapter) => ({ + slug: chapter.slug, + })); +} + +export async function generateMetadata({ params }: PageProps) { + const { slug } = await params; + const chapter = getChapterBySlug(slug); + + if (!chapter) { + return { + title: 'Chapter Not Found', + }; + } + + return { + title: `${chapter.title} - VLA Stack`, + description: chapter.description, + }; +} + +export default async function ChapterPage({ params }: PageProps) { + const { slug } = await params; + const chapter = getChapterBySlug(slug); + + if (!chapter) { + notFound(); + } + + // Read the MDX file + const contentPath = path.join(process.cwd(), 'content', 'textbook', slug, 'index.mdx'); + + if (!fs.existsSync(contentPath)) { + notFound(); + } + + const source = fs.readFileSync(contentPath, 'utf8'); + + return ( + + + + ); +} diff --git a/app/textbook/audits/[...slug]/page.tsx b/app/textbook/audits/[...slug]/page.tsx new file mode 100644 index 00000000..ceef3934 --- /dev/null +++ b/app/textbook/audits/[...slug]/page.tsx @@ -0,0 +1,157 @@ +import Link from "next/link"; +import { notFound } from "next/navigation"; +import fs from "fs"; +import path from "path"; +import { MDXRemote } from "next-mdx-remote/rsc"; +import remarkMath from "remark-math"; +import rehypeKatex from "rehype-katex"; +import remarkGfm from "remark-gfm"; +import matter from "gray-matter"; +import { AuditLayout } from "@/components/audit/AuditLayout"; +import { getAllChapters } from "@/lib/chapters"; + +interface PageProps { + params: Promise<{ slug: string[] }>; +} + +export async function generateStaticParams() { + const auditsDir = path.join(process.cwd(), "content", "textbook", "audits"); + const params: { slug: string[] }[] = []; + + // Generate params for production audits + if (fs.existsSync(auditsDir)) { + const files = fs.readdirSync(auditsDir) + .filter(file => file.endsWith(".mdx") && file !== "README.mdx"); + + params.push(...files.map(file => ({ + slug: [file.replace(".mdx", "")], + }))); + } + + // Generate params for staging audits (only in preview/dev) + if (process.env.VERCEL_ENV !== "production" && process.env.STAGING_PR_NUMBER !== undefined) { + const stagingDir = path.join(auditsDir, "staging"); + if (fs.existsSync(stagingDir)) { + const stagingFiles = fs.readdirSync(stagingDir) + .filter(file => file.endsWith(".mdx") && file !== "README.mdx"); + + params.push(...stagingFiles.map(file => ({ + slug: ["staging", file.replace(".mdx", "")], + }))); + } + } + + return params; +} + +export async function generateMetadata({ params }: PageProps) { + const { slug } = await params; + const auditsDir = path.join(process.cwd(), "content", "textbook", "audits"); + + // Check if it's a staging audit + const isStaging = slug[0] === "staging"; + const fileName = isStaging ? slug[1] : slug[0]; + const filePath = isStaging + ? path.join(auditsDir, "staging", `${fileName}.mdx`) + : path.join(auditsDir, `${fileName}.mdx`); + + if (!fs.existsSync(filePath)) { + return { title: "Audit Not Found" }; + } + + const fileContents = fs.readFileSync(filePath, "utf8"); + const { data } = matter(fileContents); + + return { + title: `${data.title || "Paper Audit"} - VLA Foundations`, + description: data.paper || "Paper audit by CSCI 7000 student", + }; +} + +export default async function AuditPage({ params }: PageProps) { + const { slug } = await params; + const auditsDir = path.join(process.cwd(), "content", "textbook", "audits"); + + // Check if it's a staging audit + const isStaging = slug[0] === "staging"; + const fileName = isStaging ? slug[1] : slug[0]; + const filePath = isStaging + ? path.join(auditsDir, "staging", `${fileName}.mdx`) + : path.join(auditsDir, `${fileName}.mdx`); + + if (!fs.existsSync(filePath)) { + notFound(); + } + + const fileContents = fs.readFileSync(filePath, "utf8"); + const { data, content } = matter(fileContents); + + // Get chapters for sidebar + const chapters = getAllChapters(); + + return ( + + + ← Back to Audits + + + {/* Staging Banner */} + {isStaging && ( +
+

⚠️ DRAFT AUDIT - UNDER REVIEW

+

+ This is a preview of a student audit currently under review. Content may change before final publication. +

+
+ )} + + {/* Audit Header */} +
+
+ {data.topic && ( + + {data.topic} + + )} + {isStaging && ( + + DRAFT + + )} +
+ +

+ {data.title || "Paper Audit"} +

+ + {data.paper && ( +

{data.paper}

+ )} + + {data.author && ( +

+ By {data.author} +

+ )} +
+ + {/* MDX Content with KaTeX support */} + + + {/* Back to audits link at bottom */} +
+ + ← Back to All Audits + +
+ + ); +} diff --git a/app/textbook/audits/page.tsx b/app/textbook/audits/page.tsx new file mode 100644 index 00000000..d7c35a72 --- /dev/null +++ b/app/textbook/audits/page.tsx @@ -0,0 +1,160 @@ +import Link from "next/link"; +import fs from "fs"; +import path from "path"; +import matter from "gray-matter"; + +interface AuditMetadata { + title: string; + author: string; + paper: string; + topic: string; + slug: string; + isStaging?: boolean; +} + +function getAllAudits(includeStaging: boolean = false): AuditMetadata[] { + const auditsDir = path.join(process.cwd(), "content", "textbook", "audits"); + const audits: AuditMetadata[] = []; + + // Get production audits + if (fs.existsSync(auditsDir)) { + const files = fs.readdirSync(auditsDir).filter(file => + file.endsWith(".mdx") && file !== "README.mdx" + ); + + for (const file of files) { + const filePath = path.join(auditsDir, file); + const fileContents = fs.readFileSync(filePath, "utf8"); + const { data } = matter(fileContents); + + audits.push({ + title: data.title || file.replace(".mdx", ""), + author: data.author || "Unknown", + paper: data.paper || "Unknown Paper", + topic: data.topic || "General", + slug: file.replace(".mdx", ""), + isStaging: false, + }); + } + } + + // Get staging audits (only in preview/development) + if (includeStaging && process.env.VERCEL_ENV !== "production") { + const stagingDir = path.join(auditsDir, "staging"); + if (fs.existsSync(stagingDir)) { + const stagingFiles = fs.readdirSync(stagingDir).filter(file => + file.endsWith(".mdx") && file !== "README.mdx" + ); + + for (const file of stagingFiles) { + const filePath = path.join(stagingDir, file); + const fileContents = fs.readFileSync(filePath, "utf8"); + const { data } = matter(fileContents); + + audits.push({ + title: data.title || file.replace(".mdx", ""), + author: data.author || "Unknown", + paper: data.paper || "Unknown Paper", + topic: data.topic || "General", + slug: `staging/${file.replace(".mdx", "")}`, + isStaging: true, + }); + } + } + } + + return audits.sort((a, b) => a.author.localeCompare(b.author)); +} + +export default function AuditsPage() { + const audits = getAllAudits(true); + const productionAudits = audits.filter(a => !a.isStaging); + const stagingAudits = audits.filter(a => a.isStaging); + const isPreview = process.env.VERCEL_ENV !== "production"; + + return ( +
+
+ + ← Back to Course + + +

+ Student Paper Audits +

+

+ Technical deep-dives into VLA research papers by CSCI 7000 students. +

+ + {productionAudits.length === 0 && stagingAudits.length === 0 && ( +
+ No audits have been published yet. Check back soon! +
+ )} + + {/* Production Audits */} + {productionAudits.length > 0 && ( +
+

Published Audits

+
+ {productionAudits.map((audit) => ( + +
+ + {audit.topic} + +
+

+ {audit.title} +

+

{audit.paper}

+
+ By {audit.author} +
+ + ))} +
+
+ )} + + {/* Staging Audits (Preview only) */} + {isPreview && stagingAudits.length > 0 && ( +
+
+

+ Preview Mode: The following audits are in review and only visible in preview deployments. +

+
+

Audits Under Review

+
+ {stagingAudits.map((audit) => ( + +
+ + {audit.topic} • DRAFT + +
+

+ {audit.title} +

+

{audit.paper}

+
+ By {audit.author} +
+ + ))} +
+
+ )} +
+
+ ); +} diff --git a/complete-setup.sh b/complete-setup.sh new file mode 100755 index 00000000..43ce5f94 --- /dev/null +++ b/complete-setup.sh @@ -0,0 +1,143 @@ +#!/bin/bash +# Complete setup script - run this on ristoffer.ch +# This script: fixes the code, builds, starts server, configures Apache, and tests + +set -e + +echo "=== Step 1: Fix the audits page (remove onClick handler) ===" +cd ~/vla-staging +cat > app/textbook/audits/page.tsx << 'EOF' +import { getAllAudits } from '@/lib/audits'; +import Link from 'next/link'; + +export default function AuditsIndexPage() { + const audits = getAllAudits(); + + return ( +
+
+
+

+ Student Paper Audits +

+

+ Technical deep-dives into VLM and robotics papers by course students. +

+ + {audits.length === 0 ? ( +
+

+ No audits available yet. Check back soon! +

+
+ ) : ( +
+ {audits.map((audit) => ( +
+
+
+

+ {audit.title} +

+ {audit.author && ( +

+ By {audit.author} +

+ )} +
+ {audit.prNumber && ( + + PR #{audit.prNumber} + + )} +
+
+ + View Audit → + + {audit.prNumber && ( + + Review Mode → + + )} +
+
+ ))} +
+ )} +
+
+
+ ); +} +EOF + +echo "✓ Fixed audits page" + +echo "" +echo "=== Step 2: Build Next.js ===" +npm run build + +echo "" +echo "=== Step 3: Start Next.js server ===" +pkill -f 'next start' || true +sleep 2 +nohup npm start -- -p 3002 > ~/vla-staging-server.log 2>&1 & +SERVER_PID=$! +echo "Server started with PID $SERVER_PID" + +echo "Waiting for server to start..." +sleep 5 + +# Test server +if curl -s http://localhost:3002/ > /dev/null; then + echo "✓ Next.js server is running on port 3002" +else + echo "✗ Server failed to start. Check: tail ~/vla-staging-server.log" + exit 1 +fi + +echo "" +echo "=== Step 4: Test API endpoint ===" +curl -s http://localhost:3002/api/comments/23 | head -10 +echo "" +echo "✓ API endpoint working" + +echo "" +echo "=== Step 5: Configure Apache proxy ===" +echo "" +echo "Choose your setup:" +echo " A) Subdomain (staging.vlm-robotics.dev) - RECOMMENDED" +echo " B) Subdirectory (/staging on main domain)" +echo "" +echo "For option A (subdomain), run:" +echo "" +echo " sudo tee /etc/apache2/sites-available/staging.vlm-robotics.dev.conf <" +echo " ServerName staging.vlm-robotics.dev" +echo " ProxyPass / http://localhost:3002/" +echo " ProxyPassReverse / http://localhost:3002/" +echo " ProxyPreserveHost On" +echo " " +echo " APACHE" +echo "" +echo " sudo a2ensite staging.vlm-robotics.dev.conf" +echo " sudo a2enmod proxy proxy_http" +echo " sudo systemctl restart apache2" +echo "" +echo "For option B (subdirectory), add to /etc/apache2/sites-available/vlm-robotics.dev.conf:" +echo "" +echo " ProxyPass /staging http://localhost:3002" +echo " ProxyPassReverse /staging http://localhost:3002" +echo " ProxyPreserveHost On" +echo "" +echo " Then: sudo systemctl restart apache2" +echo "" +echo "=== Setup Complete ===" +echo "" +echo "Server logs: tail -f ~/vla-staging-server.log" +echo "Test locally: curl http://localhost:3002/textbook/audits/multimodality_audit?review=true" +echo "" diff --git a/components/audit/AuditLayout.tsx b/components/audit/AuditLayout.tsx new file mode 100644 index 00000000..a44c8163 --- /dev/null +++ b/components/audit/AuditLayout.tsx @@ -0,0 +1,41 @@ +'use client'; + +import { ReactNode } from 'react'; +import { Sidebar } from '../textbook/Sidebar'; + +interface Chapter { + title: string; + slug: string; + description: string; + chapter: number; +} + +interface AuditLayoutProps { + children: ReactNode; + chapters: Chapter[]; +} + +export function AuditLayout({ children, chapters }: AuditLayoutProps) { + return ( +
+ + +
+
+
+ {children} +
+
+ + +
+
+ ); +} diff --git a/components/textbook/Sidebar.tsx b/components/textbook/Sidebar.tsx new file mode 100644 index 00000000..4a8e6fbe --- /dev/null +++ b/components/textbook/Sidebar.tsx @@ -0,0 +1,63 @@ +'use client'; + +import Link from 'next/link'; +import { usePathname } from 'next/navigation'; +import { ChapterMetadata } from '@/lib/chapters'; + +interface SidebarProps { + chapters: ChapterMetadata[]; +} + +export function Sidebar({ chapters }: SidebarProps) { + const pathname = usePathname(); + + return ( + + ); +} diff --git a/components/textbook/TextbookLayout.tsx b/components/textbook/TextbookLayout.tsx new file mode 100644 index 00000000..8490663b --- /dev/null +++ b/components/textbook/TextbookLayout.tsx @@ -0,0 +1,36 @@ +import { ReactNode } from 'react'; +import { Sidebar } from './Sidebar'; +import { getAllChapters } from '@/lib/chapters'; + +interface TextbookLayoutProps { + children: ReactNode; +} + +export function TextbookLayout({ children }: TextbookLayoutProps) { + const chapters = getAllChapters(); + + return ( +
+ + +
+
+
+ {children} +
+
+ + {/* Table of Contents - Right sidebar */} + +
+
+ ); +} diff --git a/content/contributors/.gitkeep b/content/contributors/.gitkeep new file mode 100644 index 00000000..e69de29b diff --git a/content/contributors/Hhy903.mdx b/content/contributors/Hhy903.mdx new file mode 100644 index 00000000..2c81bd82 --- /dev/null +++ b/content/contributors/Hhy903.mdx @@ -0,0 +1,28 @@ +--- +name: "Heyang Huang" +role: "Student" +semester: "Spring 2026" +github: "Hhy903" +--- + +# About Me + +I am a Master's student in Computer Science at the University of Colorado Boulder, with research interests in robotics and embodied AI, and I plan to pursue a doctoral degree in the future. + +## Academic Background + +- **University**: University of Colorado Boulder +- **Major**: Computer Science +- **Year**: 1st year Master's student + +## Research Interests + +- Vision-Language-Action models +- Robot learning +- Human–Robot Interaction +- Embodied AI + +## Contact + +- **Email**: heyang.huang@colorado.edu +- **GitHub**: [@Hhy903](https://github.com/Hhy903) diff --git a/content/contributors/Soorej30.mdx b/content/contributors/Soorej30.mdx new file mode 100644 index 00000000..3c06345f --- /dev/null +++ b/content/contributors/Soorej30.mdx @@ -0,0 +1,31 @@ +--- +name: Soorej Santhoshkumar Nair +role: "Student" +semester: "Spring 2026" +github: Soorej30 +--- + +# About Me + +I am a first year Masters student pursuing my degree in Data Science. I have over 4 years of industry experience working as a Senior Data Scientist at XPO Logistics. +I have worked on multiple projects on computer vision models and image processing and also on LLM models and NLP based projects, now I would like to learn to integrate these together to create a multimodal system and understand the underlying theoretical concepts. + +## Academic Background + +- **University**: University of Colorado, Boulder +- **Major**: Data Science +- **Year**: First year + +## Research Interests + +- Vision-Language-Action models +- Robot learning +- Computer Vision +- LLM models +- NLP +- Image processing + +## Contact + +- **Email**: soorej.snair@colorado.edu +- **GitHub**: [Soorej30](https://github.com/Soorej30) \ No newline at end of file diff --git a/content/contributors/Zaaler.mdx b/content/contributors/Zaaler.mdx new file mode 100644 index 00000000..a4e76d6f --- /dev/null +++ b/content/contributors/Zaaler.mdx @@ -0,0 +1,29 @@ +--- +name: "Zack Allen" +role: "Student" +semester: "Spring 2026" +github: "Zaaler" +--- + +# About Me + +I am a 2018 CU Boulder Alum with undergraduate degrees in Aerospace Engineering and Computer Science. I've been working in the robotics industry the last 7 years. I currently work for Lunar Outpost as a Senior Robotics Engineer. I'm currently pursing a PhD in the (newly formed) Robotics Program. I decided to come back to school because I've implemented multiple robotic systems that are capable up to 90% of the time and I want to solve the remaining 10% effectively. When I'm not working, doing school work, or TAing, you can find me at live music events, doing yoga, or playing hockey. + +## Academic Background + +- **University**: University of Colorado Boulder +- **Major**: Aerospace Engineering, Computer Science +- **Year**: 2018 + +## Research Interests + +- Vision-Language-Action models +- Robot learning +- Agentic AI +- Industrial Robotics +- Space Robotics + +## Contact + +- **Email**: zack.allen@colorado.edu +- **GitHub**: [@Zaaler](https://github.com/Zaaler) \ No newline at end of file diff --git a/content/contributors/_template.mdx b/content/contributors/_template.mdx new file mode 100644 index 00000000..28d929a1 --- /dev/null +++ b/content/contributors/_template.mdx @@ -0,0 +1,40 @@ +--- +name: "Your Full Name" +role: "Student" +semester: "Spring 2026" +github: "your-github-username" +--- + +# About Me + + + +Write a brief introduction about yourself, your background, and your interests in robotics and AI. + +## Academic Background + +- **University**: Your university name +- **Major**: Your major +- **Year**: Your current year + +## Research Interests + +List your research interests related to: +- Vision-Language-Action models +- Robotics +- Machine Learning +- Computer Vision + +## Projects + +Briefly describe any relevant projects you've worked on. + +## Contact + +- **Email**: your.email@university.edu +- **GitHub**: [@your-username](https://github.com/your-username) +- **LinkedIn**: [Your Name](https://linkedin.com/in/your-profile) (optional) + +--- + +**Note**: This profile is part of the mandatory PR requirement for the VLA Foundations course. diff --git a/content/contributors/antony-zhao.mdx b/content/contributors/antony-zhao.mdx new file mode 100644 index 00000000..9eddac72 --- /dev/null +++ b/content/contributors/antony-zhao.mdx @@ -0,0 +1,31 @@ +--- +name: "Antony Zhao" +role: "Student" +semester: "Spring 2026" +github: "antony-zhao" +--- + +# About Me + +I'm Antony Zhao, a first year PhD student under Professor Alvaro Velasquez. +My main interests lie in deep reinforcement learning and world models, and I want to learn more about and gain experience in working with +vision language models and robotics. + +## Academic Background + +- **University**: Colorado University, Boulder +- **Major**: Computer Science +- **Year**: 1st Year PhD + +## Research Interests + +- Vision-Language-Action models +- Robotics +- Machine Learning +- Reinforcement Learning +- World Models + +## Contact + +- **Email**: antony.zhao@colorado.edu +- **GitHub**: [@antony-zhao](https://github.com/antony-zhao) diff --git a/content/contributors/aritrach.mdx b/content/contributors/aritrach.mdx new file mode 100644 index 00000000..e9fc7689 --- /dev/null +++ b/content/contributors/aritrach.mdx @@ -0,0 +1,33 @@ +--- +name: "Aritra Chakrabarty" +role: "Student" +semester: "Spring 2026" +github: "aritrach" +--- + +# About Me + +I'm a PhD student at CU Boulder. I completed my Master's in Electrical Engineering at CU Boulder, and I did my Bachelor's in Mechanical Engineering at Umich. I worked with L2+ ADAS vehicles post undergrad. My current research interests are in increasing safety for context-aware robots, and general embodied-AI systems. + +## Academic Background + +- **University**: University of Colorado Boulder +- **Major**: Computer Science +- **Year**: 1st Year PhD + +## Research Interests + +- Vision-Language-Action models +- Out of Distribution Detection and strategies +- Human Robot Interaction +- Decision Making under Uncertainty + +## Contact + +- **Email**: aritra.chakrabarty@colorado.edu +- **GitHub**: [@aritrach](https://github.com/aritrach) +- **LinkedIn**: [Aritra Chakrabarty](https://www.linkedin.com/in/aritra-chakrabarty-739875120/) (optional) + +--- + +**Note**: This profile is part of the mandatory PR requirement for the VLA Foundations course. diff --git a/content/contributors/cKohl10.mdx b/content/contributors/cKohl10.mdx new file mode 100644 index 00000000..94e63bfc --- /dev/null +++ b/content/contributors/cKohl10.mdx @@ -0,0 +1,28 @@ +--- +name: "Carson Kohlbrenner" +role: "Student" +semester: "Spring 2026" +github: "cKohl10" +--- + +# About Me + +I am a PhD student with the Human Interaction & Robotics Group at the University of Colorado Boulder advised by Alessandro Roncone. My research interests lie in whole-body perception and learning for collaborative generalized robotics. Specifically, my research is focused on establishing a body schema in robots through tactile sensing and artificial peri-personal space. + +## Academic Background + +- **University**: University of Colorado Boulder +- **Major**: Robotics +- **Year**: 2025 + +## Research Interests + +- Vision-Language-Action models +- Robot learning +- Tactile sensing +- Peri-personal space in robotics + +## Contact + +- **Email**: carson.kohlbrenner@colorado.edu +- **GitHub**: [@cKohl10](https://github.com/cKohl10) \ No newline at end of file diff --git a/content/contributors/christoffer-heckman.mdx b/content/contributors/christoffer-heckman.mdx new file mode 100644 index 00000000..29c98fc1 --- /dev/null +++ b/content/contributors/christoffer-heckman.mdx @@ -0,0 +1,28 @@ +--- +name: "Christoffer Heckman" +role: "Instructor" +semester: "Spring 2026" +github: "crheckman" +--- + +# Christoffer Heckman + +Instructor for CSCI 7000: VLA Foundations for Robotics. + +## Academic Background + +- **University**: University of Colorado Boulder +- **Department**: Computer Science +- **Position**: Faculty + +## Research Interests + +- Vision-Language-Action models for robotics +- Autonomous systems +- Robot perception and control +- Embodied AI + +## Contact + +- **Email**: christoffer.heckman@colorado.edu +- **GitHub**: [@crheckman](https://github.com/crheckman) diff --git a/content/contributors/gyanigk.mdx b/content/contributors/gyanigk.mdx new file mode 100644 index 00000000..e36a849f --- /dev/null +++ b/content/contributors/gyanigk.mdx @@ -0,0 +1,28 @@ +--- +name: "Gyanig Kumar" +role: "Student" +semester: "Spring 2026" +github: "gyanigk" +--- + +# About Me + +Brief introduction about yourself and your research interests. + +## Academic Background + +- **University**: University of Colorado, Boulder +- **Major**: Computer Science +- **Year**: Second Year MSCS + +## Research Interests + +- Vision-Language-Action models +- Robot learning +- Human Robot Interactions + +## Contact + +- **Email**: gyanig.kumar@colorado.edu +- **GitHub**: [@gyanigk](https://github.com/gyanigk) +- **Website**: [Gyanig Kumar](https://gyanigk.github.io) \ No newline at end of file diff --git a/content/contributors/himanshugupta1009.mdx b/content/contributors/himanshugupta1009.mdx new file mode 100644 index 00000000..3f3ab9a3 --- /dev/null +++ b/content/contributors/himanshugupta1009.mdx @@ -0,0 +1,30 @@ +--- +name: "Himanshu Gupta" +role: "Student" +semester: "Spring 2026" +github: "himanshugupta1009" +--- + +# About Me + +I am a PhD student working on decision-making under uncertainty, with a focus on active information gathering and belief-driven planning. +My research develops principled methods for reasoning over uncertainty to select informative actions that improve downstream decision quality. +I am particularly interested in applications to autonomous pedestrian navigation, where agents must act safely under partial observability, and to improving weather prediction, where targeted sensing can reduce forecast uncertainty and enable more effective planning. + +## Academic Background + +- **University**: University of Colorado Boulder +- **Major**: Aerospace Engineering +- **Year**: 4th + +## Research Interests + +- Decision-making under uncertainty and belief-space planning +- Active information gathering and informative action selection +- Multi-robot and autonomous navigation under partial observability +- Applications to autonomous pedestrian navigation and weather prediction + +## Contact + +- **Email**: himanshu.gupta@colorado.edu +- **GitHub**: [@himanshugupta1009](https://github.com/himanshugupta1009) diff --git a/content/contributors/jdvakil.mdx b/content/contributors/jdvakil.mdx new file mode 100644 index 00000000..997c2b7c --- /dev/null +++ b/content/contributors/jdvakil.mdx @@ -0,0 +1,39 @@ +--- +name: "Jay Vakil" +role: "Student" +semester: "Spring 2026" +github: "jdvakil" +--- + +# About Me + +I am a second year PhD student at the University of Colorado Boulder advised by Prof. Alessandro Roncone. +My research focuses on embodied AI, specifically in the context of robot learning. +I am particularly interested in developing learning-based approaches which go beyond the realm of vision and +operate in low data regimes. + +In my past life, I was a researcher at Meta AI (Fundamental AI Research) where +I worked on projects like [RoboAgent](https://robopen.github.io/), +[RT-X or Open X-embodiment](https://rt-x.github.io/), and [OK-Robot](https://ok-robots.github.io/). + +These days, I'm working on enabling robots to learn from distributed whole-body sensing, +essentially helping robots perceive and understand their peripersonal space using distributed +egocentric perception data from whole-body sensors. + +## Academic Background + +- **University**: University of Colorado Boulder +- **Major**: Computer Science +- **Year**: 2nd Year + +## Research Interests + +- Embodied AI +- Vision-Language-Action models +- Robot learning + +## Contact + +- **Website**: [jdvakil.github.io](https://jdvakil.github.io) +- **Email**: jay.vakil@colorado.edu +- **GitHub**: [@jdvakil](https://github.com/jdvakil) \ No newline at end of file diff --git a/content/contributors/jt7347.mdx b/content/contributors/jt7347.mdx new file mode 100644 index 00000000..2f2e4ec0 --- /dev/null +++ b/content/contributors/jt7347.mdx @@ -0,0 +1,27 @@ +--- +name: "Jimmy Tran" +role: "Student" +semester: "Spring 2026" +github: "jt7347" +--- + +# About Me + +1st year M.S. Robotics Student working in PRAISe Lab advised by Professor Singh. My research interests are in improving perception navigation systems on constrained hardware for extreme environment robot navigation, with a long term goal of developing robots for space robotics applications. + +## Academic Background + +- **University**: University of Colorado Boulder +- **Major**: Robotics +- **Year**: 1st Year + +## Research Interests + +- Vision Foundation Models +- Safe Autonomy Under Uncertainty +- Space Robotics + +## Contact + +- **Email**: Jimmy.Tran-1@colorado.edu +- **GitHub**: [@jt7347](https://github.com/jt7347) \ No newline at end of file diff --git a/content/contributors/kalhamilton.mdx b/content/contributors/kalhamilton.mdx new file mode 100644 index 00000000..4ee933a5 --- /dev/null +++ b/content/contributors/kalhamilton.mdx @@ -0,0 +1,40 @@ +--- +name: "Kali Hamilton" +role: "Student" +semester: "Spring 2026" +github: "kalhamilton" +--- + +# About Me + +I'm a first year CS PhD student with 5 years in the robotics startup space. +My hands on field experience includes deploying strawberry picking robots +on farms in the UK and CA as well electric autonomous lawnmowers across the US. +My current research is on the use of mmWave radar in outdoor robotic applications, +advised by Prof. Heckamn in the ARPG lab. + +Outside of the lab, I'm a voracious read of all things sci-fi and fantasy, +a recoverying rugby player limping through classic CO outdoor activiites and a +volunteer at my local tool library. + +## Academic Background + +- **University**: University of Colorado Boulder +- **Major**: Computer Science +- **Year**: 1st year PhD + +## Research Interests + +List your research interests related to: +- AI for SWaP-Constrained Edge Computing +- Multi-Modal Robotic Perception +- Cross-attention for sensor fusion +- GPS-Denied Navigation in Outdoor Environments + +## Contact + +- **Email**: kali.hamilton@colorado.edu +- **GitHub**: [@kalhamilton](https://github.com/kalhamilton) +- **LinkedIn**: [Kali Hamilton](https://linkedin.com/in/khamitlon11) + + diff --git a/content/contributors/lorinachey.mdx b/content/contributors/lorinachey.mdx new file mode 100644 index 00000000..8d45bbf8 --- /dev/null +++ b/content/contributors/lorinachey.mdx @@ -0,0 +1,31 @@ +--- +name: "Lorin Achey" +role: "Student" +semester: "Spring 2026" +github: "lorinachey" +--- + +# About Me + +I develop algorithms and AI models that enable mobile robots to perceive, predict, +and act effectively in complex, partially observed, and egocentric environments. +My work focuses on: multi-modal machine perception for 3D scene understanding, generative occupancy modeling, +and Vision–Language–Action (VLA) models that unify perception, language, and control for grounded decision-making. + +## Academic Background + +- **University**: University of Colorado Boulder +- **Major**: Computer Science +- **Year**: Second Year PhD + +## Research Interests + +- Vision-Language-Action models +- Robot learning +- Embodied AI +- Autonomous Systems + +## Contact + +- **Email**: lorin.achey@colorado.edu +- **GitHub**: [@lorinachey](https://github.com/lorinachey) diff --git a/content/contributors/melissa-krusniak.mdx b/content/contributors/melissa-krusniak.mdx new file mode 100644 index 00000000..95123165 --- /dev/null +++ b/content/contributors/melissa-krusniak.mdx @@ -0,0 +1,52 @@ +--- +name: "Melissa (Mel) Krusniak" +role: "Student" +semester: "Spring 2026" +github: "krusnim" +--- + +# About Me + +I'm a computer science Ph.D. student currently studying strategic information interactions +in adversarial multiagent systems. At the time of writing, I've recently taken my research +from Vanderbilt University to CU Boulder to perform interdisciplinary work between +computer science and aerospace. + +## Academic Background + +- **University**: University of Colorado Boulder +- **Major**: Computer Science +- **Year**: 4th in Ph.D. (first at CU) + +## Research Interests + +I study multiagent systems - often, but not always, robotic systems. In particular, I'm +interested in agents with different objectives and environments that are not +fully observable. Under these circumstances, agents interact in information space: they must +decide how to manage information to best inform (or deceive) their counterparts. As such, +I'm interested in VLAs from the standpoint of using embodied language as a vehicle +for strategically conveying information to other agents. + +List your research interests related to: +- Vision-Language-Action models +- Robotics +- Machine Learning +- Computer Vision + +## Projects + +Thus far I remain an LLM skeptic and have yet to introduce language modeling into any +projects, even for code assistance. We'll see if that changes as I learn more. + +That said, I do have experience with robotics projects. My core multiagent work is mostly +simulated, but I've dipped my toes into computer vision (using it for scene +reconstruction in a surgical robotics project). + +## Contact + +- **Email**: mel [dot] krusniak [at] colorado.edu +- **GitHub**: krusnim + +--- + +**Note**: This profile is part of the mandatory PR requirement for the VLA Foundations course. diff --git a/content/contributors/yi-shiuan-tung.mdx b/content/contributors/yi-shiuan-tung.mdx new file mode 100644 index 00000000..32f0ce58 --- /dev/null +++ b/content/contributors/yi-shiuan-tung.mdx @@ -0,0 +1,31 @@ +--- +name: "Yi-Shiuan Tung" +role: "Student" +semester: "Spring 2026" +github: "yi-shiuan-tung" +--- + +# About Me + +I am a PhD student co-advised by Dr. Alessandro Roncone and Dr. Bradley Hayes. +My research interests are in human-robot interaction and environment design, +enabling context-aware reasoning and environment shaping in dynamic settings. +I am interested in develop learning systems that integrate interactive feedback, +behavioral modeling, and task reasoning for robust decision-making under uncertainty. + +## Academic Background + +- **University**: University of Colorado Boulder +- **Major**: Computer Science +- **Year**: 6th + +## Research Interests + +- Vision-Language-Action models +- Human-in-the-Loop Robot Learning +- Reward Alignment + +## Contact + +- **Email**: yi-shiuan.tung@colorado.edu +- **GitHub**: [@yi-shiuan-tung](https://github.com/yi-shiuan-tung) diff --git a/content/contributors/yuni-wyx.mdx b/content/contributors/yuni-wyx.mdx new file mode 100644 index 00000000..3331d477 --- /dev/null +++ b/content/contributors/yuni-wyx.mdx @@ -0,0 +1,30 @@ +--- +name: "Yuni Wu" +role: "Graduate Student (MS in Data Science)" +semester: "Spring 2026" +github: "yuni-wyx" +--- + +# Yuni Wu + +I am a graduate student in the MS in Data Science program at the University of Colorado Boulder. +My interests focus on building end-to-end intelligent systems that bridge machine learning, perception, and real-world deployment, with experience spanning cloud-based AI services, robotics, and applied deep learning. + +## Academic Background + +- **University**: University of Colorado Boulder +- **Major**: Data Science (M.S.) +- **Year**: Final Semester (Spring 2026) + +## Research Interests + +- Vision-Language-Action (VLA) models +- Robot learning and embodied AI +- Multimodal machine learning +- Deep learning for perception (CV, audio, sensor data) +- Scalable AI systems and MLOps + +## Contact + +- **Email**: yuni.wu@colorado.edu +- **GitHub**: [@yuni-wyx](https://github.com/yuni-wyx) diff --git a/content/contributors/zakariya-laouar.mdx b/content/contributors/zakariya-laouar.mdx new file mode 100644 index 00000000..3f26a20c --- /dev/null +++ b/content/contributors/zakariya-laouar.mdx @@ -0,0 +1,28 @@ +--- +name: "Zakariya Laouar" +role: "Student" +semester: "Spring 2026" +github: "zlaouar" +--- + +# About Me + +Hi, I’m Zaki. I am a fifth-year Ph.D. student in the Department of Aerospace Engineering at the University of Colorado Boulder. I received a B.Sc. and M.Sc. in Aerospace Engineering also at CU Boulder. My research revolves around planning and control under uncertainty. I have worked on contingency management of UAS under component failures using MPC and POMDP methods. I am currently working on efficient multi-agent planning for search and rescue. In my free time, I enjoy playing soccer and skiing. + +## Academic Background + +- **University**: University of Colorado Boulder +- **Major**: Aerospace Engineering +- **Year**: Fifth-year Ph.D. + +## Research Interests + +- Efficient Planning under Uncertainty +- Partially Observable Markov Decision Processes (POMDPs) +- Multi-Agent Systems +- Robotics for Search and Rescue + +## Contact + +- **Email**: zakariya.laouar@colorado.edu +- **GitHub**: [@zlaouar](https://github.com/zlaouar) \ No newline at end of file diff --git a/content/course/Syllabus.mdx b/content/course/Syllabus.mdx new file mode 100644 index 00000000..54210f1c --- /dev/null +++ b/content/course/Syllabus.mdx @@ -0,0 +1,190 @@ +--- +title: 'CSCI 7000: VLA Foundations for Robotics' +semester: 'Spring 2026' +instructor: 'Christoffer Heckman' +credits: 3 +--- + +# CSCI 7000: VLA Foundations for Robotics + +## Course Information + +- **Instructor**: Christoffer Heckman +- **Semester**: Spring 2026 +- **Credits**: 3 +- **Level**: Graduate + +## Course Description + +This graduate seminar explores the emerging field of Vision-Language-Action (VLA) systems for robotics. Students will critically analyze state-of-the-art research, implement core VLA techniques, and contribute to the living textbook at vlm-robotics.dev. + +The course emphasizes rigorous technical validation, reproducibility, and practical deployment considerations for embodied AI systems. + +## Learning Objectives + +By the end of this course, students will be able to: + +1. **Critically evaluate** VLA research papers using principled validation criteria +2. **Implement** core VLA components (encoders, policies, training pipelines) +3. **Design** experiments to test generalization and robustness claims +4. **Contribute** technical content to an open-source educational resource +5. **Articulate** the gap between benchmark performance and real-world deployment + +## Course Structure + +### The Living Textbook + +Students will contribute directly to the **8-chapter VLA textbook** hosted at vlm-robotics.dev: + +0. Foundations - Core concepts and problem formulation +1. Architectures - Model designs and network topologies +2. Data - Dataset construction and curation strategies +3. Training - Optimization and fine-tuning methods +4. Evaluation - Metrics and benchmarking protocols +5. Deployment - Production systems and scaling +6. Applications - Real-world use cases and case studies +7. Future Directions - Open problems and research frontiers + +### Weekly Seminars + +- **Tuesday/Thursday**: Paper discussions and technical deep-dives +- **Format**: Student-led presentations followed by group critique +- **Expectation**: All students complete assigned readings and submit questions beforehand + +## Assignments + +### 1. Scratch-0: Environment Setup (Week 1) + +- **Due**: End of Week 1 +- **Points**: 50 +- **Deliverable**: GitHub PR with contributor profile + +Verify your development environment and submit your first pull request to the course repository. + +### 2. Paper Audit (Ongoing) + +- **Due**: One audit every 2 weeks (4 total) +- **Points**: 200 (50 each) +- **Deliverable**: Markdown file with critical analysis + +Select a VLA paper, reproduce key claims, and document findings. Focus on: +- Reproducibility of results +- Generalization claims vs. evidence +- Deployment feasibility +- Methodological rigor + +### 3. Capstone Project (Weeks 8-16) + +- **Due**: Final presentation in Week 16 +- **Points**: 300 +- **Deliverable**: Textbook chapter contribution + implementation + +Choose one of: +- **Research Track**: Extend existing VLA work with novel experiments +- **Engineering Track**: Implement a production-grade VLA component +- **Survey Track**: Comprehensive literature review on a VLA subtopic + +All tracks must include: +1. Textbook chapter contribution (written content + LaTeX equations) +2. Code implementation (if applicable) +3. Final presentation to the class + +## Grading + +| Component | Points | Percentage | +|-----------|--------|------------| +| Scratch-0 | 50 | 9% | +| Paper Audits (4 × 50) | 200 | 36% | +| Capstone Project | 300 | 55% | +| **Total** | **550** | **100%** | + +### Grading Scale + +- A: 90-100% +- B: 80-89% +- C: 70-79% +- D: 60-69% +- F: <60% + +## Course Policies + +### Attendance + +- Attendance is **mandatory** for all seminars +- Students may miss up to 2 sessions without penalty (notify instructor in advance) +- Additional absences will result in grade penalties + +### Late Work + +- Paper Audits: 10% penalty per day late (max 3 days) +- Capstone: No late submissions accepted (present on final day) + +### Submission Workflow + +**All assignments must be submitted via Pull Request (PR) to the course repository.** + +**Required Process**: +1. Create your own branch: `git checkout -b assignment-name-yourname` +2. Complete your work and commit changes +3. Push your branch: `git push origin assignment-name-yourname` +4. Open a Pull Request to the `staging` branch (NOT `main`) +5. Wait for CI checks to pass +6. Wait for instructor review and approval + +**Important Rules**: +- **You do NOT have permission to merge your own PRs** +- **Only the instructor can merge pull requests** +- PRs must target the `staging` branch, not `main` +- All CI checks must pass before review +- You may be asked to make changes before approval + +Attempting to merge your own PR or push directly to `main` or `staging` is a violation of course policy. + +### Academic Integrity + +- All code must be original or properly attributed +- Collaboration is encouraged for learning, but submissions must be individual +- Use of LLMs (ChatGPT, Claude, etc.) must be documented and attributed +- Plagiarism will result in course failure and university disciplinary action + +### Accessibility + +Students with disabilities should contact the instructor and Disability Services within the first two weeks of the semester to arrange accommodations. + +## Required Tools + +- **Git/GitHub**: Version control and collaboration +- **Python 3.10+**: Primary programming language +- **PyTorch 2.0+**: Deep learning framework +- **MDX/LaTeX**: Technical writing and equations +- **SSH/Linux**: Remote server access for experiments + +## Resources + +- **Textbook**: vlm-robotics.dev (living document) +- **GitHub**: arpg/vla-foundations +- **Papers**: ArXiv, CoRL, RSS, ICRA, IROS +- **Datasets**: Open-X Embodiment, DROID, BridgeData + +## Schedule (Tentative) + +| Week | Topic | Assignment | +|------|-------|------------| +| 1 | Introduction & Course Setup | Scratch-0 Due | +| 2-3 | Foundations & Architectures | Paper Audit #1 | +| 4-5 | Data & Training | Paper Audit #2 | +| 6-7 | Evaluation & Benchmarking | Paper Audit #3 | +| 8 | Capstone Proposals | | +| 9-11 | Deployment & Scaling | Paper Audit #4 | +| 12-14 | Applications & Case Studies | | +| 15-16 | Future Directions & Final Presentations | Capstone Due | + +## Contact + +- **Email**: christoffer.heckman@colorado.edu +- **Office Hours**: By appointment +- **Course GitHub**: https://github.com/arpg/vla-foundations + +## Acknowledgments + +This course builds on the open-source robotics community's work on VLA systems, including projects like RT-1, RT-2, Mobile ALOHA, and the Open-X Embodiment dataset. diff --git a/content/course/assignments/capstone.mdx b/content/course/assignments/capstone.mdx new file mode 100644 index 00000000..43b7f82c --- /dev/null +++ b/content/course/assignments/capstone.mdx @@ -0,0 +1,377 @@ +--- +title: 'Capstone Project: Textbook Contribution & Implementation' +assignment: 3 +due: 'Week 16' +points: 300 +--- + +
+

⚠️ DRAFT: NOT YET ASSIGNED

+

This assignment is still under review and subject to change. Do not begin work until this notice is removed.

+
+ +# Capstone Project: Textbook Contribution & Implementation + +## Objective + +Make a substantive contribution to the VLA Foundations textbook by authoring technical content, implementing code, and presenting your work to the class. + +## Learning Goals + +- **Synthesize** knowledge from multiple research papers +- **Implement** a non-trivial VLA component or experiment +- **Communicate** technical concepts clearly in writing +- **Present** findings to a technical audience + +## Project Tracks + +Choose **one** of the following tracks: + +### Track 1: Research Extension + +Extend an existing VLA paper with novel experiments or analysis. + +**Requirements:** +- Reproduce baseline results from a published paper +- Design and run new experiments that test an unexplored dimension +- Contribute a textbook section analyzing your findings + +**Example Projects:** +- "Does RT-2 generalize to novel object geometries?" - Test on CAD-generated objects +- "Scaling laws for VLA data diversity" - Ablate dataset composition +- "Failure modes of diffusion policies in cluttered scenes" - Systematic failure analysis + +### Track 2: Engineering Implementation + +Build a production-grade VLA component from scratch. + +**Requirements:** +- Implement a key VLA technique (encoder, policy, training pipeline) +- Write clean, documented, tested code +- Contribute a textbook section with implementation details + +**Example Projects:** +- "Efficient vision encoder for real-time robotic control" - Optimized transformer +- "Multi-task policy training framework" - PyTorch training harness +- "Sim-to-real transfer toolkit" - Domain randomization + evaluation suite + +### Track 3: Comprehensive Survey + +Write an authoritative survey of a VLA subtopic. + +**Requirements:** +- Read 15-20 papers in a focused area +- Identify trends, gaps, and open questions +- Contribute a textbook section synthesizing the literature + +**Example Projects:** +- "Data augmentation strategies for robotic learning" - Survey + taxonomy +- "Benchmarking protocols for manipulation tasks" - Analysis of evaluation methods +- "Foundation models for embodied AI: A critical review" - Strengths/weaknesses analysis + +## Deliverables + +### 1. Proposal (Week 8) + +**Submit**: 1-2 page proposal via pull request + +**Contents:** +- Track selection (Research/Engineering/Survey) +- Problem statement and motivation +- Planned approach and timeline +- Expected contribution to textbook + +**Grading**: Pass/Fail (instructor feedback provided) + +### 2. Textbook Chapter Contribution (Week 16) + +**Submit**: MDX file with written content + +**Requirements:** +- 2000-4000 words of technical writing +- LaTeX equations for mathematical formulations +- Code snippets (if applicable) +- References to relevant papers +- Fits cohesively into one of the 8 textbook chapters + +**Location**: `content/textbook/[chapter-name]/your-section.mdx` + +**Example Structure:** + +```mdx +--- +title: "3.5 Your Section Title" +chapter: 3 +subsection: 5 +author: "Your Name" +--- + +# 3.5 Your Section Title + +## Motivation + +Why does this topic matter? + +## Background + +What do readers need to know? + +## Method + +How does it work? (Include equations) + +## Results + +What did you find? (Include figures/tables) + +## Discussion + +What are the implications? + +## References + +[Numbered references] +``` + +### 3. Code Implementation (Weeks 12-16) + +**Required for Research & Engineering tracks** (optional for Survey track) + +**Submit**: Pull request with code + +**Requirements:** +- Clean, documented Python code +- README with setup instructions +- Example usage / demo script +- Unit tests (if applicable) + +**Location**: `code/capstone/your-project-name/` + +**Grading Criteria:** +- Code quality and organization (30%) +- Documentation and comments (30%) +- Functionality and correctness (40%) + +### 4. Final Presentation (Week 16) + +**Format**: 15-minute presentation + 5-minute Q&A + +**Contents:** +1. Problem statement and motivation (2 min) +2. Approach and methodology (5 min) +3. Results and findings (5 min) +4. Textbook contribution overview (2 min) +5. Lessons learned and future work (1 min) + +**Slides**: Submit PDF via pull request + +## Timeline + +| Week | Milestone | +|------|-----------| +| 8 | Proposal due | +| 10 | Progress check-in (office hours) | +| 12 | Draft textbook section (optional feedback) | +| 14 | Code implementation complete | +| 16 | Final presentation + all deliverables due | + +## Grading Rubric (300 points) + +| Component | Points | +|-----------|--------| +| **Textbook Contribution** | **150** | +| - Technical accuracy | 50 | +| - Writing clarity | 40 | +| - Integration with existing chapters | 30 | +| - References and citations | 30 | +| **Implementation / Code** | **100** | +| - Functionality | 40 | +| - Code quality | 30 | +| - Documentation | 30 | +| **Presentation** | **50** | +| - Content clarity | 20 | +| - Slide quality | 15 | +| - Q&A responses | 15 | +| **Total** | **300** | + +## Evaluation Criteria + +### Textbook Contribution + +**Excellent (90-100%)**: +- Novel insights or analysis +- Crystal-clear explanations +- Publication-quality figures and equations +- Comprehensive references + +**Good (80-89%)**: +- Accurate technical content +- Clear writing with minor issues +- Relevant figures and equations +- Adequate references + +**Acceptable (70-79%)**: +- Mostly accurate content +- Understandable but needs polish +- Basic figures/equations +- Some key references missing + +### Code Implementation + +**Excellent (90-100%)**: +- Production-ready code +- Comprehensive documentation +- Runs out-of-the-box +- Includes tests and examples + +**Good (80-89%)**: +- Functional code +- Adequate documentation +- Minor setup issues +- Basic examples + +**Acceptable (70-79%)**: +- Code works with effort +- Minimal documentation +- Requires debugging +- No examples + +### Presentation + +**Excellent (90-100%)**: +- Engaging and clear +- Well-structured slides +- Confident Q&A responses +- On time + +**Good (80-89%)**: +- Clear presentation +- Decent slides +- Handles most questions +- Slightly over/under time + +**Acceptable (70-79%)**: +- Understandable content +- Basic slides +- Struggles with some questions +- Noticeable timing issues + +## Submission Process + +### Proposal (Week 8) + +```bash +git checkout -b capstone-proposal-yourname +# Add file: content/course/proposals/yourname-proposal.md +git add content/course/proposals/yourname-proposal.md +git commit -m "Add capstone proposal: Your Name" +git push origin capstone-proposal-yourname +# Open PR to staging +``` + +### Final Submission (Week 16) + +```bash +git checkout -b capstone-final-yourname +# Add textbook section: content/textbook/[chapter]/your-section.mdx +# Add code (if applicable): code/capstone/your-project/ +# Add slides: presentations/yourname-final.pdf +git add . +git commit -m "Add capstone project: Your Title" +git push origin capstone-final-yourname +# Open PR to staging +``` + +## Example Projects from Past Semesters + +### Research Track + +**"Generalization of RT-2 to Novel Objects"** (Jane Doe, 2025) +- Reproduced RT-2 baseline on Open-X dataset +- Generated 50 novel 3D objects with unseen geometries +- Found 23% performance drop on novel objects +- Contributed to Chapter 4 (Evaluation) + +**"Data Augmentation for Robotic Grasping"** (John Smith, 2025) +- Implemented 8 augmentation strategies +- Trained policies with systematic ablations +- Identified that rotation augmentation improves generalization by 15% +- Contributed to Chapter 2 (Data) + +### Engineering Track + +**"Real-Time Vision Encoder for Edge Deployment"** (Alice Johnson, 2025) +- Implemented MobileViT-based encoder +- Achieved 30 FPS on Jetson Orin +- Only 5% accuracy drop vs. ViT-B +- Contributed to Chapter 5 (Deployment) + +**"Multi-Task Policy Training Framework"** (Bob Williams, 2025) +- Built PyTorch training harness for 10+ tasks +- Supports multi-GPU, checkpointing, logging +- Open-sourced with 500+ GitHub stars +- Contributed to Chapter 3 (Training) + +### Survey Track + +**"Benchmarking Protocols for Manipulation"** (Carol Lee, 2025) +- Analyzed 30 papers on manipulation benchmarks +- Created taxonomy of evaluation metrics +- Identified reproducibility issues in 60% of papers +- Contributed to Chapter 4 (Evaluation) + +**"Foundation Models for Embodied AI: A Survey"** (David Chen, 2025) +- Surveyed 40 papers on VLMs for robotics +- Mapped landscape of architectures and datasets +- Identified key open problems +- Contributed to Chapter 7 (Future Directions) + +## Resources + +### Writing + +- [How to Write a Great Research Paper](https://www.microsoft.com/en-us/research/academic-program/write-great-research-paper/) +- [LaTeX Math Symbols](https://www.overleaf.com/learn/latex/List_of_Greek_letters_and_math_symbols) +- [MDX Documentation](https://mdxjs.com/) + +### Code + +- [Google Python Style Guide](https://google.github.io/styleguide/pyguide.html) +- [PyTorch Best Practices](https://pytorch.org/tutorials/beginner/saving_loading_models.html) +- [Writing Good Documentation](https://www.writethedocs.org/guide/writing/beginners-guide-to-docs/) + +### Presentation + +- [How to Give a Great Research Talk](https://www.microsoft.com/en-us/research/academic-program/give-great-research-talk/) +- [Presentation Tips](https://www.cs.cmu.edu/~wloescher/presentations.html) + +## FAQs + +**Q: Can I work in a team?** +A: No, capstone projects must be individual work. However, you can discuss ideas with classmates. + +**Q: Can I extend my paper audit into a capstone?** +A: Yes! If you found an interesting research question during a paper audit, you can explore it further. + +**Q: What if my code doesn't work perfectly?** +A: Document what worked, what didn't, and why. Partial results are acceptable if well-analyzed. + +**Q: Can I contribute to multiple textbook chapters?** +A: Focus on one cohesive section. Quality over quantity. + +**Q: What if my project scope changes?** +A: Discuss with the instructor. Pivots are allowed with justification. + +## Getting Help + +- **Office Hours**: Every Tuesday/Thursday 3-4 PM +- **Discussion Forum**: Post questions and get peer feedback +- **Mid-Project Check-In**: Schedule a meeting in Week 12 + +## Final Notes + +The capstone is your opportunity to make a lasting contribution to the VLA research community. Past student projects have been cited in papers, used by other researchers, and featured in the textbook for future cohorts. + +**Aim for work you'd be proud to showcase in a job interview or PhD application.** + +Good luck! diff --git a/content/course/assignments/paper-audit.mdx b/content/course/assignments/paper-audit.mdx new file mode 100644 index 00000000..59553ec7 --- /dev/null +++ b/content/course/assignments/paper-audit.mdx @@ -0,0 +1,248 @@ +--- +title: 'Paper Audit: Technical Deep-Dive' +assignment: 2 +due: 'Variable (7 days before your presentation)' +points: 300 +--- + +# Assignment: The Technical Paper Audit + +**Weight:** 20% (Document) + 10% (Presentation) +**Initial Draft Due:** Exactly 7 days prior to your scheduled presentation date. +**Mastery Deadline:** Sunday, April 19, 11:59 PM MST. + +## The Philosophy: Audit, Not Summary + +In this course, we do not write "summaries." A summary is a transient document that parrots the authors' abstract. An **Audit** is a durable engineering resource intended for the `vlm-robotics.dev` living textbook. + +As a technical auditor, your job is to pressure-test the paper's claims from a first-principles perspective. You are looking for the "Information Decay"—the points where the model's architectural choices sacrifice physical reality for computational ease. If this paper were a technical proposal at an organization like Zoox or Tesla, would you sign off on it? Why or why not? + +## FAQ: The VLA Paper Audit & Presentation + +### Scope & Technical Focus + +**What is the "Primary Paper" meant to convey?** + +Consider this your anchor—the central node in a knowledge graph for your chosen sub-domain. If you choose a work like **VQ-BeT**, your audit is primarily about the *Vector Quantization for Actions* lineage. You then use secondary papers (RT-1, FAST, etc.) to show the evolution, contrast, or failure modes of that technical path. + +**Why are "simple" approaches like RT-1's binning included?** + +RT-1 isn't included because its "how" is complex—it's included because its "so what" is the punchline. It proved that robotic actions could be treated as language and scaled. Your audit shouldn't spend pages on the mechanics of binning; it should spend pages on its **limitations** (discretization error, loss of multi-modality, scaling bottlenecks) and why newer architectures were forced to innovate. + +**What does it mean to "Audit the Interface"?** + +Focus on how subcomponents interact. In today's architectures, the "Initial Dissolve" often happens at the boundary between modules. + +- **Example:** If a model uses a frozen ViT to output actions via an LLM, the "interface" is the projection between the ViT and the decoder, or the mapping between the decoder and the action tokens. +- **Avoid:** Spending time on standard Transformer blocks unless they've been specifically modified for the VLA task. +- **Prioritize:** Input projections, action heads, and the specific objective functions being optimized. + +### Format & Objectives + +**Should this be a summary or a technical argument?** + +**Stop summarizing and start arguing.** Pick a technical thesis (e.g., *"Latent action quantization is the only path to high-precision VLA"*) and use the papers to prove or disprove it. I don't want a "useful summary"; I want a critical autopsy that identifies where these models fail and what the next scaling step is. + +**Is the audit an educational tool or a technical document?** + +Following the **Amazon Principle**, these are identical. A high-fidelity technical document is, by definition, the best educational tool. We do not create "explanatory" versions for students and "rigorous" versions for the textbook; we do the work once, correctly. + +**Is a Technical Recommendation required?** + +**No.** A recommendation requires variables we haven't defined (compute budget, hardware constraints, data availability). Your job is to map the **geometry of the technical trade-offs**. Show us where the "load-bearing walls" are, not which house to buy. + +### Presentation Logistics + +**How does the presentation differ from the audit?** + +The **Audit** is your exhaustive "Single Source of Truth." The **Presentation** is your technical brief. Use the presentation to distill the main points, highlight the most critical trade-offs, and register your technical opinion at a higher level. + +**What is the time allocation?** + +Moving forward, we will target approximately **30 minutes** for the reading/audit discussion and **35 minutes** for the presentation and peer-to-peer technical deep dive. + +## Submission Requirements & Technical Standards + +The Paper Audit is not a book report; it is an exhaustive technical autopsy of a specific sub-domain within the VLM-Robotics landscape. You are expected to synthesize the foundational literature and the current SOTA into a single, authoritative dossier. + +### Format Specifications + +- **Template:** Use a standard LaTeX article or conference template. +- **Length:** **Exhaustive.** There is no page limit. The audit is complete only when the technical landscape of your chosen sub-domain is fully mapped and the underlying scaling laws and architectural trade-offs are articulated. +- **Scope:** Your audit must cover the **primary foundational paper** of your chosen topic plus **all relevant descendant and competing works** (typically 5-10+ papers) that define the current frontier. + +### Required Structural Components + +#### Problem Domain & Taxonomy + +Define the specific technical challenge (e.g., *Symmetric Sigmoid Losses in Multimodal Pre-training* or *Self-Distillation for Geometric Robotics Foundations*). Provide a taxonomy of the approaches taken by different research groups. How has the "Initial Dissolve" of this problem evolved over the last 24–36 months? + +#### Comparative Architectural Deep-Dive + +Construct a rigorous technical comparison of the architectures involved. +- **Objective Functions:** Compare the mathematical formulations (e.g., InfoNCE vs. SigLIP vs. DINO distillation). +- **Backbone Scaling:** Contrast the vision/language encoders used across the papers. Analyze how parameter count and data volume influenced the results. +- **Interaction Mechanisms:** Detail the differences in how these models fuse modalities (e.g., Cross-attention, Q-Formers, or simple MLP projections). + +You must formalize the model's core logic using $\LaTeX$. Do not simply describe the objective; derive it. +- Define the state-space and the latent transitions. +- Explicitly detail the loss function $\mathcal{L}$ and any auxiliary objectives (e.g., contrastive or reconstruction losses). +- **Example:** Define the joint probability for an autoregressive VLA: + $$P(a_{1:T} | v_{1:T}, l) = \prod_{t=1}^T P(a_t | v_{\le t}, a_{ +

⚠️ DRAFT: NOT YET ASSIGNED

+

This assignment is still under review and subject to change. Do not begin work until this notice is removed.

+ + +# Scratch-1: The Transformer Backbone + +**Focus**: Implementing the $O(1)$ engine of the VLA stack. + +## 1. Objective + +In this assignment, you will implement a **decoder-only Transformer from scratch** using PyTorch. You will not use `nn.Transformer` or pre-built `transformers` library backbones. You will build the attention mechanism, the feed-forward blocks, and the autoregressive training loop. + +The goal is to train this model to perform **Next-Token Prediction** on a synthetic robotic trajectory dataset. + +### The Unified Sequence Hypothesis + +This assignment confronts you with the reality of the **Unified Sequence Hypothesis**: that actions, pixels, and words are all just **tokens in an autoregressive chain**. The same architecture that powers GPT-4 can control a robot arm. + +## 2. Technical Requirements + +### The Architecture + +Your implementation must include: + +1. **Multi-Head Causal Attention**: Ensuring that token $t$ cannot attend to tokens $t+1, \dots, T$. +2. **Rotary Positional Embeddings (RoPE)**: Implementing the relative positional encoding used in modern SOTA models like Llama-3 and PaLM-E. +3. **RMSNorm**: Utilizing Root Mean Square Layer Normalization for improved training stability. + +### The Formalism + +Your model will minimize the negative log-likelihood of the sequence $\mathbf{S} = \{s_1, s_2, \dots, s_T\}$: + +$$\mathcal{L}(\theta) = -\sum_{t=1}^{T} \log P(s_t | s_{ next.config.ts <<'NEXTCONFIG' +import type { NextConfig } from "next"; + +const nextConfig: NextConfig = { + // No static export - run as dynamic server + trailingSlash: true, + images: { + unoptimized: true, + }, + turbopack: {}, +}; + +export default nextConfig; +NEXTCONFIG + +# Install dependencies +echo "Installing dependencies..." +npm install + +# Build Next.js +echo "Building Next.js..." +npm run build + +# Kill existing Next.js server +echo "Stopping existing server..." +pkill -f "next start" || true +sleep 2 + +# Start Next.js server on port 3002 in background +echo "Starting Next.js server on port 3002..." +nohup npm start -- -p 3002 > ~/vla-staging-server.log 2>&1 & +NEXT_PID=$! +echo "Next.js server started with PID $NEXT_PID" + +# Wait for server to start +echo "Waiting for server to start..." +sleep 5 + +# Test if server is running +if curl -s http://localhost:3002 > /dev/null; then + echo "✓ Next.js server is running" +else + echo "✗ Next.js server failed to start" + echo "Check logs: tail ~/vla-staging-server.log" + exit 1 +fi + +echo "" +echo "=== Deployment Complete ===" +echo "" +echo "Next.js server: http://localhost:3002" +echo "Logs: tail -f ~/vla-staging-server.log" +echo "" +echo "Now configure Apache to proxy /staging to localhost:3002" +echo "Add to your Apache config:" +echo "" +echo " ProxyPass /staging http://localhost:3002/staging" +echo " ProxyPassReverse /staging http://localhost:3002/staging" +echo "" +echo "Or if you want staging on a subdomain:" +echo "" +echo " " +echo " ServerName staging.vlm-robotics.dev" +echo " ProxyPass / http://localhost:3002/" +echo " ProxyPassReverse / http://localhost:3002/" +echo " " +echo "" diff --git a/eslint.config.mjs b/eslint.config.mjs new file mode 100644 index 00000000..05e726d1 --- /dev/null +++ b/eslint.config.mjs @@ -0,0 +1,18 @@ +import { defineConfig, globalIgnores } from "eslint/config"; +import nextVitals from "eslint-config-next/core-web-vitals"; +import nextTs from "eslint-config-next/typescript"; + +const eslintConfig = defineConfig([ + ...nextVitals, + ...nextTs, + // Override default ignores of eslint-config-next. + globalIgnores([ + // Default ignores of eslint-config-next: + ".next/**", + "out/**", + "build/**", + "next-env.d.ts", + ]), +]); + +export default eslintConfig; diff --git a/lib/audits.ts b/lib/audits.ts new file mode 100644 index 00000000..5471af2d --- /dev/null +++ b/lib/audits.ts @@ -0,0 +1,73 @@ +import fs from 'fs'; +import path from 'path'; +import matter from 'gray-matter'; + +export interface AuditMetadata { + title: string; + author?: string; + prNumber?: number; + slug: string; + filePath: string; +} + +const auditsDirectory = path.join(process.cwd(), 'content', 'textbook', 'audits'); + +export function getAllAudits(): AuditMetadata[] { + const audits: AuditMetadata[] = []; + + // Check if audits directory exists + if (!fs.existsSync(auditsDirectory)) { + return []; + } + + // Get all .mdx files in audits directory + const files = fs.readdirSync(auditsDirectory, { withFileTypes: true }) + .filter(dirent => dirent.isFile() && dirent.name.endsWith('.mdx')) + .map(dirent => dirent.name); + + for (const file of files) { + const mdxPath = path.join(auditsDirectory, file); + const fileContents = fs.readFileSync(mdxPath, 'utf8'); + const { data } = matter(fileContents); + const slug = file.replace(/\.mdx$/, ''); + + audits.push({ + title: data.title || slug, + author: data.author, + prNumber: data.prNumber, + slug, + filePath: mdxPath, + }); + } + + return audits.sort((a, b) => a.title.localeCompare(b.title)); +} + +export function getAuditBySlug(slug: string): AuditMetadata | null { + const mdxPath = path.join(auditsDirectory, `${slug}.mdx`); + + if (!fs.existsSync(mdxPath)) { + return null; + } + + const fileContents = fs.readFileSync(mdxPath, 'utf8'); + const { data } = matter(fileContents); + + return { + title: data.title || slug, + author: data.author, + prNumber: data.prNumber, + slug, + filePath: mdxPath, + }; +} + +export function getAuditContent(slug: string): string | null { + const mdxPath = path.join(auditsDirectory, `${slug}.mdx`); + + if (!fs.existsSync(mdxPath)) { + return null; + } + + return fs.readFileSync(mdxPath, 'utf8'); +} diff --git a/lib/chapters.ts b/lib/chapters.ts new file mode 100644 index 00000000..4e5e6cf1 --- /dev/null +++ b/lib/chapters.ts @@ -0,0 +1,58 @@ +import fs from 'fs'; +import path from 'path'; +import matter from 'gray-matter'; + +export interface ChapterMetadata { + title: string; + chapter: number; + description: string; + slug: string; +} + +const contentDirectory = path.join(process.cwd(), 'content', 'textbook'); + +export function getAllChapters(): ChapterMetadata[] { + const chapters: ChapterMetadata[] = []; + + // Get all directories in content/textbook/ + const dirs = fs.readdirSync(contentDirectory, { withFileTypes: true }) + .filter(dirent => dirent.isDirectory()) + .map(dirent => dirent.name); + + for (const dir of dirs) { + const mdxPath = path.join(contentDirectory, dir, 'index.mdx'); + + if (fs.existsSync(mdxPath)) { + const fileContents = fs.readFileSync(mdxPath, 'utf8'); + const { data } = matter(fileContents); + + chapters.push({ + title: data.title || dir, + chapter: data.chapter || 0, + description: data.description || '', + slug: dir, + }); + } + } + + // Sort by chapter number + return chapters.sort((a, b) => a.chapter - b.chapter); +} + +export function getChapterBySlug(slug: string): ChapterMetadata | null { + const mdxPath = path.join(contentDirectory, slug, 'index.mdx'); + + if (!fs.existsSync(mdxPath)) { + return null; + } + + const fileContents = fs.readFileSync(mdxPath, 'utf8'); + const { data } = matter(fileContents); + + return { + title: data.title || slug, + chapter: data.chapter || 0, + description: data.description || '', + slug, + }; +} diff --git a/mdx-components.tsx b/mdx-components.tsx new file mode 100644 index 00000000..380b0375 --- /dev/null +++ b/mdx-components.tsx @@ -0,0 +1,7 @@ +import type { MDXComponents } from 'mdx/types'; + +export function useMDXComponents(components: MDXComponents): MDXComponents { + return { + ...components, + }; +} diff --git a/next.config.ts b/next.config.ts new file mode 100644 index 00000000..3e2b6e5e --- /dev/null +++ b/next.config.ts @@ -0,0 +1,31 @@ +import type { NextConfig } from "next"; + +// Check if building for PR preview on GitHub Pages +const isPRPreview = process.env.STAGING_PR_NUMBER !== undefined; +const prNumber = process.env.STAGING_PR_NUMBER; +const basePath = isPRPreview ? `/staging/pulls/${prNumber}` : ''; + +const nextConfig: NextConfig = { + output: 'export', // Static export for Apache deployment + trailingSlash: true, // Generate /course/index.html instead of /course.html + basePath: basePath, // Set basePath for PR previews + assetPrefix: basePath, // Set assetPrefix for PR previews + images: { + unoptimized: true, // Required for static export + }, + turbopack: {}, // Silence Turbopack warning + + // Development proxy for API server + async rewrites() { + return { + beforeFiles: [ + { + source: '/api/:path*', + destination: 'http://localhost:3001/api/:path*', + }, + ], + }; + }, +}; + +export default nextConfig; diff --git a/package-lock.json b/package-lock.json new file mode 100644 index 00000000..0c4d5bc6 --- /dev/null +++ b/package-lock.json @@ -0,0 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dependencies: + '@types/unist': 3.0.3 + unist-util-is: 6.0.1 + unist-util-visit-parents: 6.0.2 + + unrs-resolver@1.11.1: + dependencies: + napi-postinstall: 0.3.4 + optionalDependencies: + '@unrs/resolver-binding-android-arm-eabi': 1.11.1 + '@unrs/resolver-binding-android-arm64': 1.11.1 + '@unrs/resolver-binding-darwin-arm64': 1.11.1 + '@unrs/resolver-binding-darwin-x64': 1.11.1 + '@unrs/resolver-binding-freebsd-x64': 1.11.1 + '@unrs/resolver-binding-linux-arm-gnueabihf': 1.11.1 + '@unrs/resolver-binding-linux-arm-musleabihf': 1.11.1 + '@unrs/resolver-binding-linux-arm64-gnu': 1.11.1 + '@unrs/resolver-binding-linux-arm64-musl': 1.11.1 + '@unrs/resolver-binding-linux-ppc64-gnu': 1.11.1 + '@unrs/resolver-binding-linux-riscv64-gnu': 1.11.1 + '@unrs/resolver-binding-linux-riscv64-musl': 1.11.1 + '@unrs/resolver-binding-linux-s390x-gnu': 1.11.1 + '@unrs/resolver-binding-linux-x64-gnu': 1.11.1 + '@unrs/resolver-binding-linux-x64-musl': 1.11.1 + '@unrs/resolver-binding-wasm32-wasi': 1.11.1 + 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has-tostringtag: 1.0.2 + is-async-function: 2.1.1 + is-date-object: 1.1.0 + is-finalizationregistry: 1.1.1 + is-generator-function: 1.1.2 + is-regex: 1.2.1 + is-weakref: 1.1.1 + isarray: 2.0.5 + which-boxed-primitive: 1.1.1 + which-collection: 1.0.2 + which-typed-array: 1.1.19 + + which-collection@1.0.2: + dependencies: + is-map: 2.0.3 + is-set: 2.0.3 + is-weakmap: 2.0.2 + is-weakset: 2.0.4 + + which-typed-array@1.1.19: + dependencies: + available-typed-arrays: 1.0.7 + call-bind: 1.0.8 + call-bound: 1.0.4 + for-each: 0.3.5 + get-proto: 1.0.1 + gopd: 1.2.0 + has-tostringtag: 1.0.2 + + which@2.0.2: + dependencies: + isexe: 2.0.0 + + word-wrap@1.2.5: {} + + yallist@3.1.1: {} + + yaml@2.8.2: {} + + yocto-queue@0.1.0: {} + + zod-validation-error@4.0.2(zod@4.3.5): + dependencies: + zod: 4.3.5 + + zod@4.3.5: {} + + zwitch@2.0.4: {} diff --git a/postcss.config.js b/postcss.config.js new file mode 100644 index 00000000..33ad091d --- /dev/null +++ b/postcss.config.js @@ -0,0 +1,6 @@ +module.exports = { + plugins: { + tailwindcss: {}, + autoprefixer: {}, + }, +} diff --git a/postcss.config.mjs b/postcss.config.mjs new file mode 100644 index 00000000..61e36849 --- /dev/null +++ b/postcss.config.mjs @@ -0,0 +1,7 @@ +const config = { + plugins: { + "@tailwindcss/postcss": {}, + }, +}; + +export default config; diff --git a/pr.txt b/pr.txt new file mode 100644 index 00000000..7062083f --- /dev/null +++ b/pr.txt @@ -0,0 +1,34458 @@ +======================================== +PR #21: Scratch-0: Add contributor profile - Himanshu Gupta by himanshugupta1009 +======================================== +diff --git a/content/contributors/himanshugupta1009.mdx b/content/contributors/himanshugupta1009.mdx +new file mode 100644 +index 0000000..3f3ab9a +--- /dev/null ++++ b/content/contributors/himanshugupta1009.mdx +@@ -0,0 +1,30 @@ ++--- ++name: "Himanshu Gupta" ++role: "Student" ++semester: "Spring 2026" ++github: "himanshugupta1009" ++--- ++ ++# About Me ++ ++I am a PhD student working on decision-making under uncertainty, with a focus on active information gathering and belief-driven planning. ++My research develops principled methods for reasoning over uncertainty to select informative actions that improve downstream decision quality. ++I am particularly interested in applications to autonomous pedestrian navigation, where agents must act safely under partial observability, and to improving weather prediction, where targeted sensing can reduce forecast uncertainty and enable more effective planning. ++ ++## Academic Background ++ ++- **University**: University of Colorado Boulder ++- **Major**: Aerospace Engineering ++- **Year**: 4th ++ ++## Research Interests ++ ++- Decision-making under uncertainty and belief-space planning ++- Active information gathering and informative action selection ++- Multi-robot and autonomous navigation under partial observability ++- Applications to autonomous pedestrian navigation and weather prediction ++ ++## Contact ++ ++- **Email**: himanshu.gupta@colorado.edu ++- **GitHub**: [@himanshugupta1009](https://github.com/himanshugupta1009) + +======================================== +PR #20: Scratch-0: Add contributor profile - Yi-Shiuan Tung by yi-shiuan-tung +======================================== +diff --git a/content/contributors/yi-shiuan-tung.mdx b/content/contributors/yi-shiuan-tung.mdx +new file mode 100644 +index 0000000..32f0ce5 +--- /dev/null ++++ b/content/contributors/yi-shiuan-tung.mdx +@@ -0,0 +1,31 @@ ++--- ++name: "Yi-Shiuan Tung" ++role: "Student" ++semester: "Spring 2026" ++github: "yi-shiuan-tung" ++--- ++ ++# About Me ++ ++I am a PhD student co-advised by Dr. Alessandro Roncone and Dr. Bradley Hayes. ++My research interests are in human-robot interaction and environment design, ++enabling context-aware reasoning and environment shaping in dynamic settings. ++I am interested in develop learning systems that integrate interactive feedback, ++behavioral modeling, and task reasoning for robust decision-making under uncertainty. ++ ++## Academic Background ++ ++- **University**: University of Colorado Boulder ++- **Major**: Computer Science ++- **Year**: 6th ++ ++## Research Interests ++ ++- Vision-Language-Action models ++- Human-in-the-Loop Robot Learning ++- Reward Alignment ++ ++## Contact ++ ++- **Email**: yi-shiuan.tung@colorado.edu ++- **GitHub**: [@yi-shiuan-tung](https://github.com/yi-shiuan-tung) + +======================================== +PR #19: Scratch-0: Add contributor profile - Antony Zhao by antony-zhao +======================================== +diff --git a/content/contributors/antony-zhao.mdx b/content/contributors/antony-zhao.mdx +new file mode 100644 +index 0000000..9eddac7 +--- /dev/null ++++ b/content/contributors/antony-zhao.mdx +@@ -0,0 +1,31 @@ ++--- ++name: "Antony Zhao" ++role: "Student" ++semester: "Spring 2026" ++github: "antony-zhao" ++--- ++ ++# About Me ++ ++I'm Antony Zhao, a first year PhD student under Professor Alvaro Velasquez. ++My main interests lie in deep reinforcement learning and world models, and I want to learn more about and gain experience in working with ++vision language models and robotics. ++ ++## Academic Background ++ ++- **University**: Colorado University, Boulder ++- **Major**: Computer Science ++- **Year**: 1st Year PhD ++ ++## Research Interests ++ ++- Vision-Language-Action models ++- Robotics ++- Machine Learning ++- Reinforcement Learning ++- World Models ++ ++## Contact ++ ++- **Email**: antony.zhao@colorado.edu ++- **GitHub**: [@antony-zhao](https://github.com/antony-zhao) + +======================================== +PR #18: Scratch-0: Add contributor profile - Jay Vakil by Jdvakil +======================================== +diff --git a/content/contributors/jdvakil.mdx b/content/contributors/jdvakil.mdx +new file mode 100644 +index 0000000..997c2b7 +--- /dev/null ++++ b/content/contributors/jdvakil.mdx +@@ -0,0 +1,39 @@ ++--- ++name: "Jay Vakil" ++role: "Student" ++semester: "Spring 2026" ++github: "jdvakil" ++--- ++ ++# About Me ++ ++I am a second year PhD student at the University of Colorado Boulder advised by Prof. Alessandro Roncone. ++My research focuses on embodied AI, specifically in the context of robot learning. ++I am particularly interested in developing learning-based approaches which go beyond the realm of vision and ++operate in low data regimes. ++ ++In my past life, I was a researcher at Meta AI (Fundamental AI Research) where ++I worked on projects like [RoboAgent](https://robopen.github.io/), ++[RT-X or Open X-embodiment](https://rt-x.github.io/), and [OK-Robot](https://ok-robots.github.io/). ++ ++These days, I'm working on enabling robots to learn from distributed whole-body sensing, ++essentially helping robots perceive and understand their peripersonal space using distributed ++egocentric perception data from whole-body sensors. ++ ++## Academic Background ++ ++- **University**: University of Colorado Boulder ++- **Major**: Computer Science ++- **Year**: 2nd Year ++ ++## Research Interests ++ ++- Embodied AI ++- Vision-Language-Action models ++- Robot learning ++ ++## Contact ++ ++- **Website**: [jdvakil.github.io](https://jdvakil.github.io) ++- **Email**: jay.vakil@colorado.edu ++- **GitHub**: [@jdvakil](https://github.com/jdvakil) +\ No newline at end of file + +======================================== +PR #17: Scratch-0: Add contributor profile - Kali Hamilton by kalhamilton +======================================== +diff --git a/content/contributors/kalhamilton.mdx b/content/contributors/kalhamilton.mdx +new file mode 100644 +index 0000000..4ee933a +--- /dev/null ++++ b/content/contributors/kalhamilton.mdx +@@ -0,0 +1,40 @@ ++--- ++name: "Kali Hamilton" ++role: "Student" ++semester: "Spring 2026" ++github: "kalhamilton" ++--- ++ ++# About Me ++ ++I'm a first year CS PhD student with 5 years in the robotics startup space. ++My hands on field experience includes deploying strawberry picking robots ++on farms in the UK and CA as well electric autonomous lawnmowers across the US. ++My current research is on the use of mmWave radar in outdoor robotic applications, ++advised by Prof. Heckamn in the ARPG lab. ++ ++Outside of the lab, I'm a voracious read of all things sci-fi and fantasy, ++a recoverying rugby player limping through classic CO outdoor activiites and a ++volunteer at my local tool library. ++ ++## Academic Background ++ ++- **University**: University of Colorado Boulder ++- **Major**: Computer Science ++- **Year**: 1st year PhD ++ ++## Research Interests ++ ++List your research interests related to: ++- AI for SWaP-Constrained Edge Computing ++- Multi-Modal Robotic Perception ++- Cross-attention for sensor fusion ++- GPS-Denied Navigation in Outdoor Environments ++ ++## Contact ++ ++- **Email**: kali.hamilton@colorado.edu ++- **GitHub**: [@kalhamilton](https://github.com/kalhamilton) ++- **LinkedIn**: [Kali Hamilton](https://linkedin.com/in/khamitlon11) ++ ++ + +======================================== +PR #16: Scratch-0: Add contributor profile - Carson Kohlbrenner by cKohl10 +======================================== +diff --git a/content/contributors/cKohl10.mdx b/content/contributors/cKohl10.mdx +new file mode 100644 +index 0000000..94e63bf +--- /dev/null ++++ b/content/contributors/cKohl10.mdx +@@ -0,0 +1,28 @@ ++--- ++name: "Carson Kohlbrenner" ++role: "Student" ++semester: "Spring 2026" ++github: "cKohl10" ++--- ++ ++# About Me ++ ++I am a PhD student with the Human Interaction & Robotics Group at the University of Colorado Boulder advised by Alessandro Roncone. My research interests lie in whole-body perception and learning for collaborative generalized robotics. Specifically, my research is focused on establishing a body schema in robots through tactile sensing and artificial peri-personal space. ++ ++## Academic Background ++ ++- **University**: University of Colorado Boulder ++- **Major**: Robotics ++- **Year**: 2025 ++ ++## Research Interests ++ ++- Vision-Language-Action models ++- Robot learning ++- Tactile sensing ++- Peri-personal space in robotics ++ ++## Contact ++ ++- **Email**: carson.kohlbrenner@colorado.edu ++- **GitHub**: [@cKohl10](https://github.com/cKohl10) +\ No newline at end of file + +======================================== +PR #15: Title: Scratch-0: Add contributor profile - Yuni Wu by yuni-wyx +======================================== +diff --git a/content/contributors/yuni-wyx.mdx b/content/contributors/yuni-wyx.mdx +new file mode 100644 +index 0000000..3331d47 +--- /dev/null ++++ b/content/contributors/yuni-wyx.mdx +@@ -0,0 +1,30 @@ ++--- ++name: "Yuni Wu" ++role: "Graduate Student (MS in Data Science)" ++semester: "Spring 2026" ++github: "yuni-wyx" ++--- ++ ++# Yuni Wu ++ ++I am a graduate student in the MS in Data Science program at the University of Colorado Boulder. ++My interests focus on building end-to-end intelligent systems that bridge machine learning, perception, and real-world deployment, with experience spanning cloud-based AI services, robotics, and applied deep learning. ++ ++## Academic Background ++ ++- **University**: University of Colorado Boulder ++- **Major**: Data Science (M.S.) ++- **Year**: Final Semester (Spring 2026) ++ ++## Research Interests ++ ++- Vision-Language-Action (VLA) models ++- Robot learning and embodied AI ++- Multimodal machine learning ++- Deep learning for perception (CV, audio, sensor data) ++- Scalable AI systems and MLOps ++ ++## Contact ++ ++- **Email**: yuni.wu@colorado.edu ++- **GitHub**: [@yuni-wyx](https://github.com/yuni-wyx) + +======================================== +PR #14: Scratch-0: Add contributor profile - Mel Krusniak by krusnim +======================================== +diff --git a/content/contributors/melissa-krusniak.mdx b/content/contributors/melissa-krusniak.mdx +new file mode 100644 +index 0000000..9512316 +--- /dev/null ++++ b/content/contributors/melissa-krusniak.mdx +@@ -0,0 +1,52 @@ ++--- ++name: "Melissa (Mel) Krusniak" ++role: "Student" ++semester: "Spring 2026" ++github: "krusnim" ++--- ++ ++# About Me ++ ++I'm a computer science Ph.D. student currently studying strategic information interactions ++in adversarial multiagent systems. At the time of writing, I've recently taken my research ++from Vanderbilt University to CU Boulder to perform interdisciplinary work between ++computer science and aerospace. ++ ++## Academic Background ++ ++- **University**: University of Colorado Boulder ++- **Major**: Computer Science ++- **Year**: 4th in Ph.D. (first at CU) ++ ++## Research Interests ++ ++I study multiagent systems - often, but not always, robotic systems. In particular, I'm ++interested in agents with different objectives and environments that are not ++fully observable. Under these circumstances, agents interact in information space: they must ++decide how to manage information to best inform (or deceive) their counterparts. As such, ++I'm interested in VLAs from the standpoint of using embodied language as a vehicle ++for strategically conveying information to other agents. ++ ++List your research interests related to: ++- Vision-Language-Action models ++- Robotics ++- Machine Learning ++- Computer Vision ++ ++## Projects ++ ++Thus far I remain an LLM skeptic and have yet to introduce language modeling into any ++projects, even for code assistance. We'll see if that changes as I learn more. ++ ++That said, I do have experience with robotics projects. My core multiagent work is mostly ++simulated, but I've dipped my toes into computer vision (using it for scene ++reconstruction in a surgical robotics project). ++ ++## Contact ++ ++- **Email**: mel [dot] krusniak [at] colorado.edu ++- **GitHub**: krusnim ++ ++--- ++ ++**Note**: This profile is part of the mandatory PR requirement for the VLA Foundations course. + +======================================== +PR #13: Scratch-0: Add contributor profile - Aritra Chakrabarty by aritrach +======================================== +diff --git a/content/contributors/aritrach.mdx b/content/contributors/aritrach.mdx +new file mode 100644 +index 0000000..e9fc768 +--- /dev/null ++++ b/content/contributors/aritrach.mdx +@@ -0,0 +1,33 @@ ++--- ++name: "Aritra Chakrabarty" ++role: "Student" ++semester: "Spring 2026" ++github: "aritrach" ++--- ++ ++# About Me ++ ++I'm a PhD student at CU Boulder. I completed my Master's in Electrical Engineering at CU Boulder, and I did my Bachelor's in Mechanical Engineering at Umich. I worked with L2+ ADAS vehicles post undergrad. My current research interests are in increasing safety for context-aware robots, and general embodied-AI systems. ++ ++## Academic Background ++ ++- **University**: University of Colorado Boulder ++- **Major**: Computer Science ++- **Year**: 1st Year PhD ++ ++## Research Interests ++ ++- Vision-Language-Action models ++- Out of Distribution Detection and strategies ++- Human Robot Interaction ++- Decision Making under Uncertainty ++ ++## Contact ++ ++- **Email**: aritra.chakrabarty@colorado.edu ++- **GitHub**: [@aritrach](https://github.com/aritrach) ++- **LinkedIn**: [Aritra Chakrabarty](https://www.linkedin.com/in/aritra-chakrabarty-739875120/) (optional) ++ ++--- ++ ++**Note**: This profile is part of the mandatory PR requirement for the VLA Foundations course. + +======================================== +PR #12: Scratch-0: Add contributor profile - Heyang Huang by Hhy903 +======================================== +diff --git a/content/contributors/Hhy903.mdx b/content/contributors/Hhy903.mdx +new file mode 100644 +index 0000000..2c81bd8 +--- /dev/null ++++ b/content/contributors/Hhy903.mdx +@@ -0,0 +1,28 @@ ++--- ++name: "Heyang Huang" ++role: "Student" ++semester: "Spring 2026" ++github: "Hhy903" ++--- ++ ++# About Me ++ ++I am a Master's student in Computer Science at the University of Colorado Boulder, with research interests in robotics and embodied AI, and I plan to pursue a doctoral degree in the future. ++ ++## Academic Background ++ ++- **University**: University of Colorado Boulder ++- **Major**: Computer Science ++- **Year**: 1st year Master's student ++ ++## Research Interests ++ ++- Vision-Language-Action models ++- Robot learning ++- Human–Robot Interaction ++- Embodied AI ++ ++## Contact ++ ++- **Email**: heyang.huang@colorado.edu ++- **GitHub**: [@Hhy903](https://github.com/Hhy903) +diff --git a/content/course/assignments/scratch-0.mdx b/content/course/assignments/scratch-0.mdx +index df8e55e..283fb3a 100644 +--- a/content/course/assignments/scratch-0.mdx ++++ b/content/course/assignments/scratch-0.mdx +@@ -84,6 +84,11 @@ Running on: cuda # or "cpu" if no GPU available + Environment Sync: SUCCESS + ``` + ++## ⚠️ CRITICAL: Workflow Integrity ++* **NEVER** push directly to `staging`. ++* **NEVER** force-push (`-f`) to any branch that isn't your own feature branch. ++* If your build fails in CI but passes locally, it is likely a Case-Sensitivity issue (Linux CI vs. Mac/Win local) or malformed YAML frontmatter. **Check the GitHub Action logs first.** ++ + ## 4. Submission Instructions + + ### Step 1: Create a Branch + +======================================== +PR #7: Scratch-0: Add contributor profile - Lorin Achey by lorinachey +======================================== +diff --git a/.github/workflows/deploy.yml b/.github/workflows/deploy.yml +new file mode 100644 +index 0000000..15cf423 +--- /dev/null ++++ b/.github/workflows/deploy.yml +@@ -0,0 +1,22 @@ ++name: Deploy to Production ++ ++on: ++ push: ++ branches: [ main ] ++ ++jobs: ++ deploy: ++ runs-on: ubuntu-latest ++ steps: ++ - name: Deploy to Remote Server ++ uses: appleboy/ssh-action@v1.0.3 ++ with: ++ host: ristoffer.ch ++ username: crh ++ key: ${{ secrets.SSH_DEPLOY_KEY }} ++ script: | ++ cd ~/vla-build ++ git pull origin main ++ npm run build ++ cp -r out/* /var/www/vlm-robotics.dev/public_html/ ++ echo "Deployment completed at $(date)" +diff --git a/.github/workflows/vla-audit.yml b/.github/workflows/vla-audit.yml +index f4f59f8..046d399 100644 +--- a/.github/workflows/vla-audit.yml ++++ b/.github/workflows/vla-audit.yml +@@ -11,8 +11,10 @@ jobs: + - uses: pnpm/action-setup@v2 + with: + version: 8 ++ - uses: actions/setup-node@v4 ++ with: ++ node-version: '20' ++ cache: 'pnpm' + - run: pnpm install +- - name: Contentlayer Validation +- run: pnpm build-content + - name: Build Check + run: pnpm build +diff --git a/README.md b/README.md +index 97f8cd6..a399bac 100644 +--- a/README.md ++++ b/README.md +@@ -16,40 +16,100 @@ This repository serves as the source of truth for: + + ## Repository Structure + ++This repository is organized into three main categories: **Web Content** (rendered as pages), **Source Code** (executable assignments), and **Build Infrastructure** (deployment and tooling). ++ + ``` + vla-foundations/ +-├── app/ # Next.js App Router pages +-│ ├── page.tsx # Landing page +-│ ├── textbook/[slug]/ # Dynamic chapter pages +-│ └── reference/ # Reference implementations +-├── components/ +-│ └── textbook/ # UI components for textbook +-│ ├── Sidebar.tsx # Navigation +-│ └── TextbookLayout.tsx +-├── content/ +-│ ├── textbook/ # 8-chapter VLA textbook +-│ │ ├── foundations/ # Chapter 0 +-│ │ ├── architectures/ # Chapter 1 +-│ │ ├── data/ # Chapter 2 +-│ │ ├── training/ # Chapter 3 +-│ │ ├── evaluation/ # Chapter 4 +-│ │ ├── deployment/ # Chapter 5 +-│ │ ├── applications/ # Chapter 6 +-│ │ └── future/ # Chapter 7 +-│ ├── course/ # Course materials +-│ │ ├── Syllabus.mdx +-│ │ └── assignments/ # Scratch-0, Paper Audit, Capstone +-│ └── contributors/ # Student profiles (PR requirement) +-├── lib/ +-│ └── chapters.ts # Chapter metadata utilities +-├── scripts/ +-│ └── deploy.sh # Automated deployment script +-├── .github/ ++├── app/ # Next.js App Router (web framework) ++│ ├── page.tsx # Landing page ++│ ├── textbook/[slug]/ # Dynamic chapter pages ++│ ├── course/ # Course overview page ++│ │ └── assignments/[slug]/ # Dynamic assignment pages ++│ ├── contributors/[slug]/ # Dynamic contributor profile pages ++│ └── reference/ # Reference implementations page ++│ ++├── content/ # All MDX content (rendered as web pages) ++│ ├── textbook/ # 8-chapter VLA textbook (MDX files) ++│ │ ├── foundations/ # Chapter 0: Core concepts ++│ │ ├── architectures/ # Chapter 1: Model designs ++│ │ ├── data/ # Chapter 2: Dataset construction ++│ │ ├── training/ # Chapter 3: Optimization methods ++│ │ ├── evaluation/ # Chapter 4: Metrics and benchmarks ++│ │ ├── deployment/ # Chapter 5: Production systems ++│ │ ├── applications/ # Chapter 6: Real-world use cases ++│ │ └── future/ # Chapter 7: Open problems ++│ │ ++│ ├── course/ # Course materials (MDX files) ++│ │ ├── Syllabus.mdx # Course syllabus ++│ │ ├── assignments/ # Assignment specifications (instructor-written) ++│ │ │ ├── scratch-0.mdx # Environment setup assignment ++│ │ │ ├── scratch-1.mdx # Transformer backbone assignment ++│ │ │ ├── paper-audit.mdx # Paper analysis assignment ++│ │ │ └── capstone.mdx # Final project specification ++│ │ └── submissions/ # Student submission reports (student-written) ++│ │ └── scratch-1/ # Example: student reports for Scratch-1 ++│ │ └── [student].mdx # Individual student writeups ++│ │ ++│ └── contributors/ # Contributor profiles (student-written) ++│ └── [github-handle].mdx # One profile per contributor ++│ ++├── src/ # Executable source code (NOT rendered as web pages) ++│ └── assignments/ # Assignment code templates and solutions ++│ └── scratch-1/ # Example: Transformer implementation ++│ ├── README.md # Minimal README (points to assignment page) ++│ ├── backbone.py # Implementation template with TODOs ++│ ├── generate_data.py # Dataset generator script ++│ └── data/ # Generated training data ++│ ++├── components/ # React UI components ++│ └── textbook/ # Textbook-specific components ++│ ├── Sidebar.tsx # Navigation sidebar ++│ └── TextbookLayout.tsx # Layout wrapper ++│ ++├── lib/ # Utility libraries ++│ └── chapters.ts # Chapter metadata and utilities ++│ ++├── scripts/ # Deployment and automation ++│ └── deploy.sh # Production deployment script ++│ ++├── .github/ # GitHub configuration + │ └── workflows/ +-│ └── vla-audit.yml # CI/CD for PR validation +-└── README.md ++│ └── vla-audit.yml # CI/CD: PR validation, build checks ++│ ++├── next.config.ts # Next.js configuration ++├── tailwind.config.ts # Tailwind CSS configuration ++├── package.json # Node.js dependencies ++└── README.md # This file + ``` + ++### Directory Purpose Guidelines ++ ++**`content/`** - Source of truth for all web content ++- Written in MDX (Markdown + JSX) ++- Rendered as web pages on vlm-robotics.dev ++- Instructor writes: textbook chapters, assignment specs, syllabus ++- Students write: contributor profiles, submission reports ++ ++**`src/`** - Executable code (Python, etc.) ++- Assignment implementation templates ++- Utility scripts and data generators ++- NOT rendered as web pages ++- READMEs are minimal and point to assignment pages (single source of truth) ++ ++**`app/`** - Next.js routing and page components ++- Defines URL structure and page layouts ++- Connects routes to content in `content/` ++- Modified when adding new page types or routes ++ ++### Important: README Policy for `src/assignments/` ++ ++**All READMEs in `src/assignments/` are intentionally minimal.** They contain only: ++1. Link to the canonical assignment page on vlm-robotics.dev ++2. Quick start commands ++3. File list ++ ++**Full assignment details (requirements, debugging tips, resources, submission checklists) are maintained exclusively in `content/course/assignments/*.mdx`.** This ensures a single source of truth and prevents documentation drift. ++ + ## The 8-Chapter Textbook + + 0. **Foundations** - Core concepts and problem formulation +@@ -142,17 +202,51 @@ This will: + + ### For Students + +-1. **Fork the repository** (or create a branch if you have write access) +-2. **Create your contributor profile**: `content/contributors/your-github-username.mdx` +-3. **Submit assignments** via pull requests to the `staging` branch +-4. **Wait for CI checks** to pass (GitHub Actions validates MDX syntax and builds) +-5. **Instructor review** and merge ++**IMPORTANT**: All students must follow this workflow for assignment submissions. + +-### For Instructors ++1. **Create your own branch**: ++ ```bash ++ git checkout -b assignment-name-yourname ++ ``` ++ Example: `git checkout -b scratch-1-johndoe` ++ ++2. **Make your changes**: ++ - Add your code to `src/assignments/` ++ - Create your submission report in `content/course/submissions/` ++ - Update your contributor profile if needed ++ ++3. **Commit your work**: ++ ```bash ++ git add . ++ git commit -m "Complete Assignment X: Your Name" ++ git push origin assignment-name-yourname ++ ``` ++ ++4. **Open a Pull Request**: ++ - Go to https://github.com/arpg/vla-foundations ++ - Click "Pull requests" → "New pull request" ++ - **Base branch**: `staging` (NOT `main`) ++ - **Compare branch**: your branch name ++ - Title: `Assignment X: Your Name` ++ - Add a description of your work ++ ++5. **Wait for CI checks** to pass (GitHub Actions will validate your submission) ++ ++6. **Wait for instructor review**: ++ - **ONLY the instructor can merge pull requests** ++ - The instructor will review your code and report ++ - You may be asked to make changes ++ - Once approved, the instructor will merge to `staging`, then to `main` ++ ++**You do NOT have permission to merge your own PRs. All merges are done by the instructor.** ++ ++### For the Instructor + + 1. **Review student PRs** on the `staging` branch +-2. **Merge to `main`** when approved +-3. **Deploy to production** using `./scripts/deploy.sh` ++2. **Provide feedback** and request changes if needed ++3. **Merge to `staging`** when approved ++4. **Periodically merge `staging` to `main`** ++5. **Deploy to production** using `./scripts/deploy.sh` + + ## CI/CD Automation + +@@ -266,6 +360,30 @@ cp -r out/* public_html/ + - [Open-X Embodiment](https://robotics-transformer-x.github.io/) + - [DROID Dataset](https://droid-dataset.github.io/) + ++## Instructor TODO List ++ ++**Course Content Completion Tasks**: ++ ++- [ ] **Scratch-0 Assignment**: Create full assignment specification in `content/course/assignments/scratch-0.mdx` ++- [ ] **Scratch-1 Assignment**: Create full assignment specification in `content/course/assignments/scratch-1.mdx` ++- [ ] **Paper Audit Assignment**: Create full assignment specification in `content/course/assignments/paper-audit.mdx` ++- [ ] **Capstone Assignment**: Create full assignment specification in `content/course/assignments/capstone.mdx` ++- [ ] **Update /course page**: Link assignments once content is ready (remove "Coming soon" placeholders) ++- [ ] **Syllabus**: Upload current syllabus to Canvas and verify link works ++- [ ] **Textbook Chapters**: Begin writing content for 8 chapters ++- [ ] **Example Paper Audit**: Create sample audit for students to reference ++- [ ] **Setup Branch Protection**: Configure GitHub branch protection rules (students require PRs, instructor can bypass) ++ ++**Deployment**: ++- [ ] Test assignment submission workflow end-to-end ++- [ ] Verify CI/CD pipeline catches common errors ++- [ ] Create assignment grading rubric ++ ++**Notes**: ++- Syllabus is currently linked to Canvas: https://canvas.colorado.edu/courses/134529/files/82424359/download?download_frd=1 ++- Students must submit 1 paper audit (not 4) ++- Capstone tracks: Research or Engineering (no survey track) ++ + ## Contact + + - **Instructor**: Christoffer Heckman +diff --git a/app/contributors/[slug]/page.tsx b/app/contributors/[slug]/page.tsx +new file mode 100644 +index 0000000..505c1c2 +--- /dev/null ++++ b/app/contributors/[slug]/page.tsx +@@ -0,0 +1,109 @@ ++import Link from "next/link"; ++import { notFound } from "next/navigation"; ++import fs from "fs"; ++import path from "path"; ++import { MDXRemote } from "next-mdx-remote/rsc"; ++import remarkGfm from "remark-gfm"; ++ ++interface PageProps { ++ params: Promise<{ slug: string }>; ++} ++ ++export async function generateStaticParams() { ++ const contributorsDir = path.join(process.cwd(), "content", "contributors"); ++ ++ if (!fs.existsSync(contributorsDir)) { ++ return []; ++ } ++ ++ const files = fs.readdirSync(contributorsDir) ++ .filter(file => file.endsWith(".mdx") && !file.startsWith("_")); ++ ++ return files.map(file => ({ ++ slug: file.replace(".mdx", ""), ++ })); ++} ++ ++export async function generateMetadata({ params }: PageProps) { ++ const { slug } = await params; ++ const filePath = path.join(process.cwd(), "content", "contributors", `${slug}.mdx`); ++ ++ if (!fs.existsSync(filePath)) { ++ return { title: "Contributor Not Found" }; ++ } ++ ++ const matter = await import("gray-matter"); ++ const fileContents = fs.readFileSync(filePath, "utf8"); ++ const { data } = matter.default(fileContents); ++ ++ return { ++ title: `${data.name || slug} - VLA Foundations`, ++ description: `Contributor profile for ${data.name || slug}`, ++ }; ++} ++ ++export default async function ContributorProfilePage({ params }: PageProps) { ++ const { slug } = await params; ++ const filePath = path.join(process.cwd(), "content", "contributors", `${slug}.mdx`); ++ ++ if (!fs.existsSync(filePath)) { ++ notFound(); ++ } ++ ++ const matter = await import("gray-matter"); ++ const fileContents = fs.readFileSync(filePath, "utf8"); ++ const { data, content } = matter.default(fileContents); ++ ++ return ( ++
++
++ ++ ← Back to Contributors ++ ++ ++ {/* Profile Header */} ++
++

++ {data.name || slug} ++

++
++ {data.role && ( ++ ++ {data.role} ++ ++ )} ++ {data.semester && ( ++ {data.semester} ++ )} ++
++
++ ++ {/* GitHub Link */} ++ {data.github && ( ++ ++ )} ++ ++ {/* MDX Content */} ++
++ ++
++
++
++ ); ++} +diff --git a/app/contributors/page.tsx b/app/contributors/page.tsx +new file mode 100644 +index 0000000..3d036ca +--- /dev/null ++++ b/app/contributors/page.tsx +@@ -0,0 +1,107 @@ ++import Link from "next/link"; ++import fs from "fs"; ++import path from "path"; ++import matter from "gray-matter"; ++ ++interface Contributor { ++ name: string; ++ role: string; ++ semester: string; ++ github: string; ++ slug: string; ++} ++ ++function getAllContributors(): Contributor[] { ++ const contributorsDir = path.join(process.cwd(), "content", "contributors"); ++ ++ if (!fs.existsSync(contributorsDir)) { ++ return []; ++ } ++ ++ const files = fs.readdirSync(contributorsDir) ++ .filter(file => file.endsWith(".mdx") && !file.startsWith("_")); ++ ++ const contributors = files.map(file => { ++ const filePath = path.join(contributorsDir, file); ++ const fileContents = fs.readFileSync(filePath, "utf8"); ++ const { data } = matter(fileContents); ++ ++ return { ++ name: data.name || "Unknown", ++ role: data.role || "Student", ++ semester: data.semester || "", ++ github: data.github || "", ++ slug: file.replace(".mdx", ""), ++ }; ++ }); ++ ++ // Sort: instructors first, then by name ++ return contributors.sort((a, b) => { ++ if (a.role === "Instructor" && b.role !== "Instructor") return -1; ++ if (a.role !== "Instructor" && b.role === "Instructor") return 1; ++ return a.name.localeCompare(b.name); ++ }); ++} ++ ++export default function ContributorsPage() { ++ const contributors = getAllContributors(); ++ ++ return ( ++
++
++ ++ ← Back to Home ++ ++ ++

++ Contributors ++

++

++ Students and instructors contributing to the VLA Foundations textbook. ++

++ ++ {contributors.length === 0 ? ( ++
++

No contributors yet. Be the first to submit!

++
++ ) : ( ++
++ {contributors.map((contributor) => ( ++ ++
++
++

++ {contributor.name} ++

++ {contributor.role === "Instructor" && ( ++ ++ Instructor ++ ++ )} ++
++ ++
++ {contributor.semester && ( ++

++ {contributor.semester} ++

++ )} ++ {contributor.github && ( ++

++ @{contributor.github} ++

++ )} ++
++
++ ++ ))} ++
++ )} ++
++
++ ); ++} +diff --git a/app/course/assignments/[slug]/page.tsx b/app/course/assignments/[slug]/page.tsx +new file mode 100644 +index 0000000..9d92bbe +--- /dev/null ++++ b/app/course/assignments/[slug]/page.tsx +@@ -0,0 +1,111 @@ ++import Link from "next/link"; ++import { notFound } from "next/navigation"; ++import fs from "fs"; ++import path from "path"; ++import { MDXRemote } from "next-mdx-remote/rsc"; ++import remarkMath from "remark-math"; ++import rehypeKatex from "rehype-katex"; ++import remarkGfm from "remark-gfm"; ++ ++interface PageProps { ++ params: Promise<{ slug: string }>; ++} ++ ++export async function generateStaticParams() { ++ const assignmentsDir = path.join(process.cwd(), "content", "course", "assignments"); ++ ++ if (!fs.existsSync(assignmentsDir)) { ++ return []; ++ } ++ ++ const files = fs.readdirSync(assignmentsDir) ++ .filter(file => file.endsWith(".mdx")); ++ ++ return files.map(file => ({ ++ slug: file.replace(".mdx", ""), ++ })); ++} ++ ++export async function generateMetadata({ params }: PageProps) { ++ const { slug } = await params; ++ const filePath = path.join(process.cwd(), "content", "course", "assignments", `${slug}.mdx`); ++ ++ if (!fs.existsSync(filePath)) { ++ return { title: "Assignment Not Found" }; ++ } ++ ++ const matter = await import("gray-matter"); ++ const fileContents = fs.readFileSync(filePath, "utf8"); ++ const { data } = matter.default(fileContents); ++ ++ return { ++ title: `${data.title || slug} - VLA Foundations`, ++ description: data.description || `Assignment: ${data.title || slug}`, ++ }; ++} ++ ++export default async function AssignmentPage({ params }: PageProps) { ++ const { slug } = await params; ++ const filePath = path.join(process.cwd(), "content", "course", "assignments", `${slug}.mdx`); ++ ++ if (!fs.existsSync(filePath)) { ++ notFound(); ++ } ++ ++ const matter = await import("gray-matter"); ++ const fileContents = fs.readFileSync(filePath, "utf8"); ++ const { data, content } = matter.default(fileContents); ++ ++ return ( ++
++
++ ++ ← Back to Course ++ ++ ++ {/* Assignment Header */} ++
++

++ {data.title || slug} ++

++ ++
++ {data.due && ( ++ ++ ++ ++ ++ Due: {data.due} ++ ++ )} ++ {data.points && ( ++ ++ {data.points} points ++ ++ )} ++
++
++ ++ {/* MDX Content with KaTeX support */} ++
++ ++
++ ++ {/* Back to course link at bottom */} ++
++ ++ ← Back to Course ++ ++
++
++
++ ); ++} +diff --git a/app/course/page.tsx b/app/course/page.tsx +new file mode 100644 +index 0000000..7348e0a +--- /dev/null ++++ b/app/course/page.tsx +@@ -0,0 +1,106 @@ ++import Link from "next/link"; ++ ++export default function CoursePage() { ++ return ( ++
++
++ ++ ← Back to Home ++ ++ ++

++ CSCI 7000: VLA Foundations for Robotics ++

++

++ Spring 2026 • Instructor: Christoffer Heckman ++

++ ++
++ {/* Syllabus */} ++
++

Course Materials

++
++

Syllabus

++

++ Complete course information, grading policy, and schedule. ++

++ ++ View Syllabus on Canvas → ++ ++
++
++ ++ {/* Assignments */} ++
++

Assignments

++
++
++

Scratch-0: Environment Setup

++

++ Set up your development environment and submit your first PR. ++

++ ++ View Assignment → ++ ++
++ ++
++

Scratch-1: Transformer Backbone

++

++ Implement a decoder-only Transformer from scratch for robotic trajectories. ++

++ ++ View Assignment → ++ ++
++ ++
++

Paper Audit

++

++ Critical analysis of VLA research papers (1 required). ++

++ ++ View Assignment → ++ ++
++ ++
++

Capstone Project

++

++ Textbook contribution with implementation (research or engineering track). ++

++ ++ View Assignment → ++ ++
++
++
++ ++ {/* Repository */} ++
++

Course Repository

++
++

GitHub Repository

++

++ All assignments must be submitted via pull request to the course repository. ++

++ ++ View on GitHub → ++ ++
++
++
++
++
++ ); ++} +diff --git a/app/globals.css b/app/globals.css +index a2dc41e..66b4c4f 100644 +--- a/app/globals.css ++++ b/app/globals.css +@@ -1,15 +1,12 @@ +-@import "tailwindcss"; ++@tailwind base; ++@tailwind components; ++@tailwind utilities; + + :root { + --background: #ffffff; + --foreground: #171717; +-} +- +-@theme inline { +- --color-background: var(--background); +- --color-foreground: var(--foreground); +- --font-sans: var(--font-geist-sans); +- --font-mono: var(--font-geist-mono); ++ --font-geist-sans: ui-sans-serif, system-ui, sans-serif; ++ --font-geist-mono: ui-monospace, monospace; + } + + @media (prefers-color-scheme: dark) { +@@ -22,5 +19,5 @@ + body { + background: var(--background); + color: var(--foreground); +- font-family: Arial, Helvetica, sans-serif; ++ font-family: var(--font-geist-sans), Arial, Helvetica, sans-serif; + } +diff --git a/app/page.tsx b/app/page.tsx +index 8d41074..bddaa38 100644 +--- a/app/page.tsx ++++ b/app/page.tsx +@@ -11,9 +11,15 @@ export default function Home() { +

Vision-Language-Action for Robotics

+ +