/bin/scan_alignments Not Found

Hi , I met "OSError: File not found: ../bin/scan_alignments" when I ran run_test.sh

Is this file missed in the source code?

[msahraeian]

Hi @SongboWangGit You should run build.sh and it will create the scan_alignments for you at neusomatic/bin/scan_alignments. You should use the path to this binary with the --scan_alignments_binary argument as in here.