Error with colab notebook for nucleoprotein

[Jiacheng06]

There was a strange KeyError "J" showing up when I ran the notebook, please see the fig attached. Thanks!

[brianhie]

The notebook uses an old version of the esm package (fair-esm==0.4.0) that supports parsing non-amino acid characters. If you want to fix the error (and reproduce the paper results), you can just revert to that version of esm. Ideally, I should also make the package robust to these kinds of inputs.

[Jiacheng06]

Thanks a lot! I see.