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 # RAPID2 Tutorial
 
-> ⚠️ DRAFT. Work in progress.
+The RAPID2 tutorial has moved to the RAPID Hub documentation site:
 
-This tutorial demonstrates a real scientific workflow using RAPID2. It focuses
-on obtaining input data, running the model, and verifying that results match
-expectations.
+→ **[Running RAPID][URL_HUB]**
 
-All commands below are written in `bash`. This example is intended to serve as
-a primary reference for new users.
-
-## 1. Get Started
-
-Create working directories:
-
-``` bash
-mkdir -p input/Tutorial
-mkdir -p output/Tutorial
-```
-
-We'll be using files from a Zenodo repository:
-
-[![DOI:10.5281/zenodo.8248069][SVG_ZENODO]][URL_ZENODO]
-
-Specifically, the following files are needed:
-
-- `rapid_connect_pfaf_ii.zip`
-- `coords_pfaf_ii.zip`
-- `rapid_coupling_pfaf_ii_GLDAS.zip`
-
-For this tutorial, we use the `pfaf_74` files, corresponding to the Mississippi
-River Basin.
-
-## 2. Download Raw Runoff Data with `dgldas2`
-
-Download GLDAS phase `2.1`, model `VIC`, for `2010-01`:
-
-``` bash
-dgldas2 \
-    --phase 2.1 \
-    --model VIC \
-    --time 2010-01 \
-    --land_surface_model \
-    input/Tutorial/GLDAS_2.1_VIC_2010-01.nc4
-```
-
-The new file is placed in `input/Tutorial`. Other files are also automatically
-downloaded in that directory and removed after use.
-
-> Note: GLDAS `2.0` is also supported, as are the `CLSM` and `NOAH` models.
-
-## 3. Transform Runoff to RAPID External Inflow with `cpllsm`
-
-Convert the GLDAS runoff file into RAPID external inflow format:
-
-``` bash
-cpllsm \
-    --land_surface_model \
-    input/Tutorial/GLDAS_2.1_VIC_2010-01.nc4 \
-    --connectivity \
-    input/Tutorial/rapid_connect_pfaf_74.csv \
-    --coordinates \
-    input/Tutorial/coords_pfaf_74.csv \
-    --coupling \
-    input/Tutorial/rapid_coupling_pfaf_74_GLDAS.csv \
-    --external_inflow \
-    input/Tutorial/Qext_pfaf_74_GLDAS_2.1_VIC_2010-01.nc4
-```
-
-## 4. Create Cold Start File with `zeroqinit`
-
-``` bash
-zeroqinit \
-    --external_inflow \
-    input/Tutorial/Qext_pfaf_74_GLDAS_2.1_VIC_2010-01.nc4 \
-    --initial_outflow \
-    input/Tutorial/Qinit_pfaf_74_GLDAS_2.1_VIC_2010-01.nc4
-```
-
-## 5. Run the Routing Model with `rapid2`
-
-Using the following content in a file called `namelist_Tutorial.md`
-
-```yaml
-# -----------------------------------------------------------------------------
-# Mandatory input files
-# -----------------------------------------------------------------------------
-Qex_ncf: './input/Tutorial/Qext_pfaf_74_GLDAS_2.1_VIC_2010-01.nc4'
-Q00_ncf: './input/Tutorial/Qinit_pfaf_74_GLDAS_2.1_VIC_2010-01.nc4'
-
-con_csv: './input/Tutorial/rapid_connect_pfaf_74.csv'
-kpr_csv: './input/Tutorial/k_pfaf_74_nrm.csv'
-xpr_csv: './input/Tutorial/x_pfaf_74_nrm.csv'
-
-bas_csv: './input/Tutorial/riv_bas_id_pfaf_74_topo.csv'
-
-# -----------------------------------------------------------------------------
-# Mandatory values
-# -----------------------------------------------------------------------------
-IS_dtR: 900
-
-# -----------------------------------------------------------------------------
-# Mandatory output files
-# -----------------------------------------------------------------------------
-Qou_ncf: './output/Tutorial/Qout_pfaf_74_GLDAS_2.1_VIC_2010-01_tst.nc4'
-Qfi_ncf: './output/Tutorial/Qfinal_pfaf_74_GLDAS_2.1_VIC_2010-01_tst.nc4'
-```
-
-``` bash
-rapid2 --namelist input/Tutorial/namelist_Tutorial.yml
-```
-
-## 6. Compare Files to Baseline with `cmpncf`
-
-``` bash
-cmpncf \
-    --previous \
-    input/Tutorial/Qinit_pfaf_74_GLDAS_2.1_VIC_2010-01_GOLD.nc4 \
-    --now \
-    input/Tutorial/Qinit_pfaf_74_GLDAS_2.1_VIC_2010-01.nc4 \
-    --relative_tolerance 1e-6 \
-    --absolute_tolerance 1e-3
-```
-
-```bash
-cmpncf \
-    --previous \
-    input/Tutorial/Qext_pfaf_74_GLDAS_2.1_VIC_2010-01_GOLD.nc4 \
-    --now \
-    input/Tutorial/Qext_pfaf_74_GLDAS_2.1_VIC_2010-01.nc4 \
-    --relative_tolerance 1e-6 \
-    --absolute_tolerance 1e-3
-```
-
-``` bash
-cmpncf \
-    --previous \
-    output/Tutorial/Qout_pfaf_74_GLDAS_2.1_VIC_2010-01_GOLD.nc4 \
-    --now \
-    output/Tutorial/Qout_pfaf_74_GLDAS_2.1_VIC_2010-01.nc4 \
-    --relative_tolerance 1e-6 \
-    --absolute_tolerance 1e-3
-```
-
-```bash
-cmpncf \
-    --previous \
-    output/Tutorial/Qfinal_pfaf_74_GLDAS_2.1_VIC_2010-01_GOLD.nc4 \
-    --now \
-    output/Tutorial/Qfinal_pfaf_74_GLDAS_2.1_VIC_2010-01.nc4 \
-    --relative_tolerance 1e-6 \
-    --absolute_tolerance 1e-3
-```
-
-## Current Known Challenges to Command Line Interface
-
-The near-term focus is on:
-
-- Clear, consistent runtime options
-- Short, intuitive 3-letter flags
-- Minimalistic and readable design
-
-At this stage, the tools remain separate commands rather than subcommands
-(e.g., like `git commit` or `git clone`). Unifying these under `rapid2` may be
-considered in the future.
-
-## Opportunities for Growth
-
-This tutorial is intended to expand over time to include:
-
-- Inspecting input datasets
-- Examining model outputs
-- Basic interpretation and analysis
-
-<!-- pyml disable-num-lines 30 line-length -->
-[SVG_ZENODO]: https://zenodo.org/badge/doi/10.5281/zenodo.8248069.svg
-
-[URL_ZENODO]: https://doi.org/10.5281/zenodo.8248069
+<!-- pyml disable-num-lines 5 line-length -->
+[URL_HUB]: https://c-h-david.github.io/rapid-hub/user-guide/getting-started/running/