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evaluation.py
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135 lines (100 loc) · 4.45 KB
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import os
import re
import argparse
import subprocess
from scipy import stats
from collections import OrderedDict
parent_path = '/data/tool'
trec_eval_script_path = os.path.join(parent_path, 'trec_eval-9.0.7/trec_eval')
sample_eval_script_path = os.path.join(parent_path, "sample_eval.pl")
gd_eval_script_path = os.path.join(parent_path, "gdeval.pl")
def run(command, get_ouput=False):
try:
if get_ouput:
process = subprocess.Popen(command, stdout=subprocess.PIPE)
output, err = process.communicate()
exit_code = process.wait()
return output
else:
subprocess.call(command)
except subprocess.CalledProcessError as e:
print(e)
def evaluate_trec(qrels, res, metrics):
# all_trecs
command = [trec_eval_script_path, '-m', 'all_trec', '-M', '1000', qrels, res]
output = run(command, get_ouput=True)
metrics_val = []
for metric in metrics:
metrics_val.append(re.findall(r'{0}\s+all.+\d+'.format(metric), output)[0].split('\t')[2].strip())
return OrderedDict(zip(metrics, metrics_val))
def evaluate_sample_trec(qrels, res, metrics):
command = [sample_eval_script_path, qrels, res]
output = run(command, get_ouput=True)
metrics_val = []
for metric in metrics:
metrics_val.append(re.findall(r'{0}\s+all.+\d+'.format(metric), output)[0].split('\t')[4].strip())
return OrderedDict(zip(metrics, metrics_val))
def evaluate_metrics(qrels, res, sample_qrels=None, metrics=None):
normal_metrics = [met for met in metrics if not met.startswith('i')]
infer_metrics = [met for met in metrics if met.startswith('i')]
metrics_val_dict = OrderedDict()
if len(normal_metrics) > 0:
metrics_val_dict.update(evaluate_trec(qrels, res, metrics=normal_metrics))
if len(infer_metrics) > 0:
metrics_val_dict.update(evaluate_sample_trec(sample_qrels, res, metrics=infer_metrics))
return metrics_val_dict
################################## perquery information ####################################
def evaluate_trec_perquery(qrels, res, metrics):
# all_trecs
command = [trec_eval_script_path, '-m', 'all_trec', '-q', '-M', '1000', qrels, res]
output = run(command, get_ouput=True)
metrics_val = []
for metric in metrics:
curr_res = re.findall(r'{0}\s+\t\d+.+\d+'.format(metric), output)
curr_res = map(lambda x: float(x.split('\t')[-1]), curr_res)
metrics_val.append(curr_res)
return OrderedDict(zip(metrics, metrics_val))
def evaluate_sample_trec_perquery(qrels, res, metrics):
command = [sample_eval_script_path, '-q', qrels, res]
output = run(command, get_ouput=True)
metrics_val = []
for metric in metrics:
curr_res = re.findall(r'{0}\s+\t\d+.+\d+'.format(metric), output)
curr_res = map(lambda x: float(x.split('\t')[-1]), curr_res)
metrics_val.append(curr_res)
return OrderedDict(zip(metrics, metrics_val))
def evaluate_metrics_perquery(qrels, res, sample_qrels=None, metrics=None):
normal_metrics = [met for met in metrics if not met.startswith('i')]
infer_metrics = [met for met in metrics if met.startswith('i')]
metrics_val_dict = OrderedDict()
if len(normal_metrics) > 0:
metrics_val_dict.update(evaluate_trec_perquery(qrels, res, metrics=normal_metrics))
if len(infer_metrics) > 0:
metrics_val_dict.update(evaluate_sample_trec_perquery(sample_qrels, res, metrics=infer_metrics))
return metrics_val_dict
def tt_test(qrels, res1, res2, sample_qrels=None, metrics=None):
met_dict1 = evaluate_metrics_perquery(qrels, res1, sample_qrels, metrics)
met_dict2 = evaluate_metrics_perquery(qrels, res2, sample_qrels, metrics)
avg_met_dict1 = evaluate_metrics(qrels, res1, sample_qrels, metrics)
avg_met_dict2 = evaluate_metrics(qrels, res2, sample_qrels, metrics)
print(avg_met_dict1)
print(avg_met_dict2)
test_dict = OrderedDict()
for met in met_dict1.keys():
p_value = stats.ttest_rel(met_dict1.get(met), met_dict2.get(met))[1]
test_dict.update({met: p_value})
print(test_dict)
return test_dict
if __name__ == '__main__':
parser = argparse.ArgumentParser()
parser.add_argument("--qrels", help="TREC qrels file path")
parser.add_argument("--baselines", help="Baseline file paths, seperated by ','")
parser.add_argument("--runs", help="competitive run paths, seperated by ','")
args = parser.parse_args()
baselines = args.baselines.split(",")
runs = args.runs.split(",")
for trec_run in runs:
for baseline in baselines:
print(baseline)
print(trec_run)
tt_test(args.qrels, baseline, trec_run, None, ['P_20', 'ndcg_cut_20'])