Millitome feedback from UPenn

[J-Yash]

1. The uterus model should be flipped around. As it stands, the anterior and posterior are backwards (See screenshot)
2. Two label errors in the uterus 3D model: 24-23 should be 79-80, 124-123 should be 123-124
3. The ovary needs to be displaced in relation to the fallopian tubes such that the tubes' "fingers" touch the ovary. Right now they don't. (See screenshot)
4. Re: Fallopian tubes, specifically the last 3 regions, comprising the 3 “slices” of the fimbriae (so 10,11,12 for the right tube and 22,23,24 for the left tube). The way those three slices are defined is with respect to the direction of curvature of the tube. That is, slice 1 (region 10 or 22) is toward the “outside” of the bend, while slice 3 (region 12 or 24) is towards the “inside” of the bend. If you imagine doing the actual dissection, and laying the tube on a table, then the cuts that create those slices would be straight downward, perpendicular to the plane of the table (corresponding to the best-fit plane through the tube model). It appears that as-is, your 3D model was created with those slices roughly parallel to this plane, rather than being perpendicular – so they need to be rotated about 90 degrees, and the regions re-defined accordingly.

[antbhavs]

Update:
1- On latest code, uterus model seems to be placed as expected. (NO FIX REQUIRED)
2- HraAmap adds labels based on the source model. Uterus source had label 124-123 , 23-24 instead of 79-80. (have updated the labels using Blender and created PR for this fix)
3- Issue created on hubmapConsortium to fix the position of the overy
hubmapconsortium/hra-kg#48
4- Fallopian tube model needs update. Awaiting changes from Alison.

[J-Yash]

Update: Revised Fallopian Tube was provided by Alison.

[antbhavs]

Updated revised fallopian tubes:
b6ec29d

[J-Yash]

Code used to create new uterus model with split blocks: https://github.com/cns-iu/hra-amap/blob/main/hra_amap/utils/split_fused_blocks.py