@csjalbert functions to fix

[csjalbert]

@csjalbert here is a list of functions that you're required to edit. Let @awbarclay or @csjalbert know if you have issues or questions. Reply to this issue with any questions or relevant information.

• combine_conflicts
• create_bayes_base
• create_bayes_ctl #11
• create_bayes_mix
• failure_rate
• get_phenotypes
• qc #13
• qc_off_chip #2
• read_biomark_qc
• read_gtseq_qc
• read_proj_geno
• read_usat_qc
• remove_alt_species

[csjalbert]

Done but leaving this as open until issues #13 and #2 are sorted out.