diff --git a/DESCRIPTION b/DESCRIPTION index ebd8a28ad..32889eaab 100644 --- a/DESCRIPTION +++ b/DESCRIPTION @@ -61,6 +61,8 @@ Suggests: sjPlot, equatiomatic, broom (>= 1.0.8), + GGally, + regress3d, lmtest, gh, lintr, diff --git a/_sec_hers_data.qmd b/_sec_hers_data.qmd new file mode 100644 index 000000000..9af50d872 --- /dev/null +++ b/_sec_hers_data.qmd @@ -0,0 +1,139 @@ +### Motivating example: `hers` data {.smaller} + +:::{.callout-note} +This section is based on @vittinghoff2e, Chapter 4. +::: + +::: notes + +{{< include _subfiles/shared/_sec_hers_intro.qmd >}} + +::: + +```{r} +#| eval: false +#| code-fold: show +library(haven) +hers <- haven::read_dta( + paste0( + "https://regression.ucsf.edu/sites/g/files", + "/tkssra6706/f/wysiwyg/home/data/hersdata.dta" + ) +) +``` + +```{r} +#| include: false +library(haven) +hers <- + fs::path_package("rme", "extdata/hersdata.dta") |> + read_dta() |> + dplyr::mutate( + HT = as_factor(HT) |> + relevel(ref = "placebo"), + statins = as_factor(statins) |> + relevel(ref = "no") + ) +``` + +::::: {.panel-tabset} + +#### Data as table + +```{r} +#| label: tbl-hers-ch4 +#| tbl-cap: "`hers` data" +hers |> head() +``` + +#### Data as graph + +```{r} +#| label: fig-hers-scatter +#| fig-cap: > +#| `hers` data (@vittinghoff2e): +#| age (years) and BMI (kg/m²) vs. baseline LDL (mg/dL), +#| colored by statin use. +library(plotly) +hers_scatter_data <- hers |> + dplyr::filter(!is.na(age), !is.na(BMI), !is.na(LDL)) +plotly::plot_ly( + x = hers_scatter_data[["age"]], + y = hers_scatter_data[["BMI"]], + z = hers_scatter_data[["LDL"]], + color = as.character(hers_scatter_data[["statins"]]), + colors = c("no" = "steelblue", "yes" = "darkorange"), + type = "scatter3d", + mode = "markers", + marker = list(size = 3, opacity = 0.5) +) |> + plotly::layout( + scene = list( + xaxis = list(title = "Age (yr)"), + yaxis = list(title = "BMI (kg/m²)"), + zaxis = list(title = "LDL (mg/dL)") + ), + legend = list(title = list(text = "Statins")) + ) +``` + +#### Key variables + +```{r} +#| label: fig-hers-key-vars +#| fig-cap: > +#| Key variables in hers data: outcome (LDL), +#| treatment (HT), and covariates (BMI, statins, age) +#| fig-height: 7 +#| fig-width: 8 +library(GGally) +hers |> + dplyr::select(LDL, HT, BMI, statins, age) |> + ggpairs( + mapping = aes(col = statins), + lower = list(continuous = GGally::wrap("points", alpha = 0.3)), + columnLabels = c( + "LDL (mg/dL)", + "HT", + "BMI (kg/m²)", + "Statins", + "Age (yr)" + ) + ) + + theme_bw() + + theme(legend.position = "bottom") +``` + +::::: + +--- + +#### Data notation {.smaller} + +::: notes +Let's define some notation to represent this data: +::: + +- $Y$: LDL cholesterol (mg/dL) +- $A$: age (years) +- $B$: BMI (kg/m²) +- $T$: hormone therapy treatment assignment + ("placebo" or "hormone therapy") +- $H$: indicator variable for $T$ = "hormone therapy" + - $H = 0$ if $T$ = "placebo" + - $H = 1$ if $T$ = "hormone therapy" +- $U$: statin use ("no" or "yes") +- $V$: indicator variable for $U$ = "yes" + - $V = 0$ if $U$ = "no" + - $V = 1$ if $U$ = "yes" + +::: notes +"Placebo" is the **reference level** for the categorical variable $T$, +and "no" is the **reference level** for statin use $U$. +The choice of reference level is arbitrary; +it only affects the interpretation of the intercept and corresponding indicator coefficients. + +Since LDL is measured at **baseline** (before the hormone therapy was administered), +$H$ is not included as a predictor in our regression models for LDL. +We instead focus on statin use $U$ (and its indicator $V$) as the key grouping variable. +::: diff --git a/_sec_hers_lm_diagnostics.qmd b/_sec_hers_lm_diagnostics.qmd new file mode 100644 index 000000000..aeb23b4e4 --- /dev/null +++ b/_sec_hers_lm_diagnostics.qmd @@ -0,0 +1,68 @@ +### Diagnostics for `hers` parallel-planes model + +#### Residuals vs fitted for `hers_lm1` + +```{r} +#| label: fig-hers-resid-fitted +#| fig-cap: "Residuals vs fitted values for `hers_lm1` (parallel planes model)" +library(ggplot2) +hers_diag <- hers |> + dplyr::mutate( + .fitted = fitted(hers_lm1), + .resid = residuals(hers_lm1) + ) + +ggplot(hers_diag, aes(x = .fitted, y = .resid)) + + geom_point(alpha = 0.3) + + geom_hline(yintercept = 0, linetype = "dashed") + + facet_wrap(~statins, labeller = label_both) + + xlab("Fitted values") + + ylab("Residuals") + + theme_bw() +``` + +#### QQ plot for `hers_lm1` + +```{r} +#| label: fig-hers-qq +#| fig-cap: "QQ plot of residuals for `hers_lm1` (parallel planes model)" +ggplot(hers_diag, aes(sample = .resid)) + + stat_qq() + + stat_qq_line() + + facet_wrap(~statins, labeller = label_both) + + theme_bw() +``` + +### Diagnostics for `hers` interaction model + +#### Residuals vs fitted for `hers_lm2` + +```{r} +#| label: fig-hers-resid-fitted-lm2 +#| fig-cap: "Residuals vs fitted values for `hers_lm2` (interaction model)" +hers_diag2 <- hers |> + dplyr::mutate( + .fitted = fitted(hers_lm2), + .resid = residuals(hers_lm2) + ) + +ggplot(hers_diag2, aes(x = .fitted, y = .resid)) + + geom_point(alpha = 0.3) + + geom_hline(yintercept = 0, linetype = "dashed") + + facet_wrap(~statins, labeller = label_both) + + xlab("Fitted values") + + ylab("Residuals") + + theme_bw() +``` + +#### QQ plot for `hers_lm2` + +```{r} +#| label: fig-hers-qq-lm2 +#| fig-cap: "QQ plot of residuals for `hers_lm2` (interaction model)" +ggplot(hers_diag2, aes(sample = .resid)) + + stat_qq() + + stat_qq_line() + + facet_wrap(~statins, labeller = label_both) + + theme_bw() +``` diff --git a/_sec_hers_lm_gof.qmd b/_sec_hers_lm_gof.qmd new file mode 100644 index 000000000..87ef4f6e3 --- /dev/null +++ b/_sec_hers_lm_gof.qmd @@ -0,0 +1,15 @@ +### Goodness of fit for `hers` models + +#### AIC and BIC for `hers` models + +```{r} +AIC(hers_lm1, hers_lm2) +BIC(hers_lm1, hers_lm2) +``` + +#### Deviance for `hers` models + +```{r} +deviance(hers_lm1) +deviance(hers_lm2) +``` diff --git a/_sec_hers_lm_interact.qmd b/_sec_hers_lm_interact.qmd new file mode 100644 index 000000000..be67d10f6 --- /dev/null +++ b/_sec_hers_lm_interact.qmd @@ -0,0 +1,123 @@ +### Interactions in `hers` data {.smaller} + +::: notes +What if the slope of LDL with respect to BMI +differs depending on age? +Then we need an "interaction" between age $A$ and BMI $B$: +::: + +$$ +\ba +Y|A,B &\sciid N(\mu(A,B), \sigma^2)\\ +\mu(a,b) &= \beta_0 + \beta_A a + \beta_B b + \beta_{AB}(a \cdot b) +\ea +$$ {#eq-hers-interact} + +::: notes +Now the slope of mean LDL with respect to BMI $B$ +depends on age $A$: + +$$ +\ba +\deriv{b}\mu(A=\red{0}, B=b) &= \beta_B + \beta_{AB} \cdot \red{0} = \beta_B \\ +\deriv{b}\mu(A=\red{a}, B=b) &= \beta_B + \beta_{AB} \red{a} +\ea +$$ + +So the slope of LDL with respect to BMI +changes by $\beta_{AB}$ for each one-year increase in age. +::: + +```{r} +#| label: tbl-hers-lm2 +#| tbl-cap: "HERS interaction model" +hers_lm2 <- lm( + LDL ~ age + BMI + age:BMI, + data = hers, + na.action = na.exclude +) +hers_plot_data <- hers |> + dplyr::filter(!is.na(age), !is.na(BMI), !is.na(LDL)) + +hers_lm2 |> + parameters::parameters() |> + parameters::print_md( + select = "{estimate}" + ) +``` + +::::: {.panel-tabset} + +#### Statins: No + +:::{#fig-hers-interact-fit-no} + +```{r} +#| code-fold: true +hers_no <- hers_plot_data |> dplyr::filter(statins == "no") + +plotly::plot_ly( + x = hers_no[["age"]], + y = hers_no[["BMI"]], + z = hers_no[["LDL"]], + type = "scatter3d", + mode = "markers", + name = "No statins", + marker = list(size = 3, opacity = 0.3, color = "steelblue") +) |> + regress3d::add_3d_surface( + model = hers_lm2, + data = hers_plot_data, + showlegend = TRUE + ) |> + plotly::layout( + scene = list( + xaxis = list(title = "Age (yr)"), + yaxis = list(title = "BMI (kg/m²)"), + zaxis = list(title = "LDL (mg/dL)") + ) + ) +``` + +Interaction model regression surface for `hers` data +(patients not taking statins) + +::: + +#### Statins: Yes + +:::{#fig-hers-interact-fit-yes} + +```{r} +#| code-fold: true +hers_yes <- hers_plot_data |> dplyr::filter(statins == "yes") + +plotly::plot_ly( + x = hers_yes[["age"]], + y = hers_yes[["BMI"]], + z = hers_yes[["LDL"]], + type = "scatter3d", + mode = "markers", + name = "Yes statins", + marker = list(size = 3, opacity = 0.3, color = "darkorange") +) |> + regress3d::add_3d_surface( + model = hers_lm2, + data = hers_plot_data, + showlegend = TRUE + ) |> + plotly::layout( + scene = list( + xaxis = list(title = "Age (yr)"), + yaxis = list(title = "BMI (kg/m²)"), + zaxis = list(title = "LDL (mg/dL)") + ) + ) +``` + +Interaction model regression surface for `hers` data +(patients taking statins) + +::: + +::::: diff --git a/_sec_hers_lm_model_selection.qmd b/_sec_hers_lm_model_selection.qmd new file mode 100644 index 000000000..9aac2ef5a --- /dev/null +++ b/_sec_hers_lm_model_selection.qmd @@ -0,0 +1,8 @@ +### Model selection for `hers` data + +#### Comparing HERS models using LRT + +```{r} +library(lmtest) +lrtest(hers_lm1, hers_lm2) +``` diff --git a/_sec_hers_lm_parallel.qmd b/_sec_hers_lm_parallel.qmd new file mode 100644 index 000000000..9f0ca0008 --- /dev/null +++ b/_sec_hers_lm_parallel.qmd @@ -0,0 +1,116 @@ +### Parallel planes regression for `hers` data {.smaller} + +::: notes +We model the distribution of LDL cholesterol +as a linear function of age and BMI +(with no interaction between them): +::: + +$$ +\ba +Y|A,B &\sciid N(\mu(A,B), \sigma^2)\\ +\mu(a,b) &= \beta_0 + \beta_A a + \beta_B b +\ea +$$ {#eq-hers-parallel} + +::: {#tbl-hers-lm1} + +```{r} +library(dplyr) +hers_lm1 <- lm( + formula = LDL ~ age + BMI, + data = hers, + na.action = na.exclude +) +hers_plot_data <- hers |> + dplyr::filter(!is.na(age), !is.na(BMI), !is.na(LDL)) + +library(parameters) +hers_lm1 |> + parameters::parameters() |> + parameters::print_md( + select = "{estimate}" + ) +``` + +Regression parameter estimates for [Model @eq-hers-parallel] + +::: + +::::: {.panel-tabset} + +#### Statins: No + +:::{#fig-hers-parallel-fit-no} + +```{r} +#| code-fold: true +library(plotly) +library(regress3d) +hers_no <- hers_plot_data |> dplyr::filter(statins == "no") + +plotly::plot_ly( + x = hers_no[["age"]], + y = hers_no[["BMI"]], + z = hers_no[["LDL"]], + type = "scatter3d", + mode = "markers", + name = "No statins", + marker = list(size = 3, opacity = 0.3, color = "steelblue") +) |> + regress3d::add_3d_surface( + model = hers_lm1, + data = hers_plot_data, + showlegend = TRUE + ) |> + plotly::layout( + scene = list( + xaxis = list(title = "Age (yr)"), + yaxis = list(title = "BMI (kg/m²)"), + zaxis = list(title = "LDL (mg/dL)") + ) + ) +``` + +Fitted regression surface from [Model @eq-hers-parallel] +(patients not taking statins) + +::: + +#### Statins: Yes + +:::{#fig-hers-parallel-fit-yes} + +```{r} +#| code-fold: true +hers_yes <- hers_plot_data |> dplyr::filter(statins == "yes") + +plotly::plot_ly( + x = hers_yes[["age"]], + y = hers_yes[["BMI"]], + z = hers_yes[["LDL"]], + type = "scatter3d", + mode = "markers", + name = "Yes statins", + marker = list(size = 3, opacity = 0.3, color = "darkorange") +) |> + regress3d::add_3d_surface( + model = hers_lm1, + data = hers_plot_data, + showlegend = TRUE + ) |> + plotly::layout( + scene = list( + xaxis = list(title = "Age (yr)"), + yaxis = list(title = "BMI (kg/m²)"), + zaxis = list(title = "LDL (mg/dL)") + ) + ) +``` + +Fitted regression surface from [Model @eq-hers-parallel] +(patients taking statins) + +::: + +::::: diff --git a/_sec_hers_lm_stratified.qmd b/_sec_hers_lm_stratified.qmd new file mode 100644 index 000000000..1a66ec516 --- /dev/null +++ b/_sec_hers_lm_stratified.qmd @@ -0,0 +1,67 @@ +### Stratified regression for `hers` data {.smaller} + +::: notes +As an alternative to the age–BMI models above, +we can model LDL as a function of BMI, +stratifying by statin use +(i.e., fitting a separate intercept and BMI slope +for each statin group): +::: + +$$ +\E{LDL|B=b, U=u} = +\beta_{no} (1-v) + \beta_{no,B}\, b(1-v) + +\beta_{yes} v + \beta_{yes,B}\, bv +$$ {#eq-hers-strat} + +::: {.column width=45%} + +::: {#tbl-hers-lm-strat} + +```{r} +hers_lm_strat <- + hers |> + lm( + formula = LDL ~ statins + statins:BMI - 1, + data = _ + ) + +hers_lm_strat |> + parameters::parameters() |> + parameters::print_md( + select = "{estimate}" + ) +``` + +Stratified regression estimates for `hers` data ([Model @eq-hers-strat]) + +::: + +::: + +:::{.column width=10%} +::: + +:::{.column width=45%} + +::: {#tbl-hers-lm-statin-interact} + +```{r} +hers_lm_statins_interact <- lm( + LDL ~ statins + BMI + statins:BMI, + data = hers, + na.action = na.exclude +) + +hers_lm_statins_interact |> + parameters::parameters() |> + parameters::print_md( + select = "{estimate}" + ) +``` + +Statin interaction model estimates + +::: + +::: diff --git a/_subfiles/Linear-models-overview/_sec_linreg_assess.qmd b/_subfiles/Linear-models-overview/_sec_linreg_assess.qmd index 7a14f434e..84b4340fb 100644 --- a/_subfiles/Linear-models-overview/_sec_linreg_assess.qmd +++ b/_subfiles/Linear-models-overview/_sec_linreg_assess.qmd @@ -2,10 +2,16 @@ {{< include _subfiles/Linear-models-overview/_sec_linreg_gof.qmd >}} +{{< include _sec_hers_lm_gof.qmd >}} + ## Diagnostics {#sec-diagnose-LMs} {{< include _subfiles/Linear-models-overview/_sec_linreg_diagnostics.qmd >}} +{{< include _sec_hers_lm_diagnostics.qmd >}} + ## Model selection {{< include _subfiles/Linear-models-overview/_sec_linreg_model_selection.qmd >}} + +{{< include _sec_hers_lm_model_selection.qmd >}} diff --git a/_subfiles/Linear-models-overview/_sec_linreg_understanding.qmd b/_subfiles/Linear-models-overview/_sec_linreg_understanding.qmd index d7f347c69..8f168565e 100644 --- a/_subfiles/Linear-models-overview/_sec_linreg_understanding.qmd +++ b/_subfiles/Linear-models-overview/_sec_linreg_understanding.qmd @@ -174,6 +174,8 @@ such as using the values -1 and 1 (see @dobson4e §2.4 for details). ::: +{{< include _sec_hers_data.qmd >}} + ## Parallel lines regression {.smaller} ::: notes @@ -426,6 +428,8 @@ even before we estimated values for those parameters. {{< include _subfiles/Linear-models-overview/_sec_linear_coef_interp_no_intxn.qmd >}} +{{< include _sec_hers_lm_parallel.qmd >}} + ## Interactions {.smaller} ::: notes @@ -679,6 +683,8 @@ the interpretation of $\b_A$ involves the reference level of $M$, and interpretation of $\beta_M$ involves the reference level of $A$ (@tbl-compare-coef-interps). ::: +{{< include _sec_hers_lm_interact.qmd >}} + ## Stratified regression {.smaller} :::{.notes} @@ -745,6 +751,8 @@ bw_lm_strat |> ::: +{{< include _sec_hers_lm_stratified.qmd >}} + ## Curved-line regression ::: notes diff --git a/inst/WORDLIST b/inst/WORDLIST index 0fe4ab2d5..56090d429 100644 --- a/inst/WORDLIST +++ b/inst/WORDLIST @@ -1,5 +1,4 @@ Aalen -affine Acknowledgements ATT ATU @@ -14,10 +13,9 @@ counterfactual counterfactuals DAGs De -devn -Ef EDA EPV +Ef Epi estimand estimands @@ -67,6 +65,7 @@ SBP SOF Satterthwaite Sjoberg +Statins standardization Stochasticity subclassification @@ -81,11 +80,11 @@ VIF VIFs Varf Vittinghoff -vxi WCGS Welch widehat Zhou +affine al anticonservative arg @@ -94,6 +93,7 @@ binom biomarkers bmatrix bmt +bv callout cdot cdots @@ -108,10 +108,13 @@ de demstats deriv det +devn df dfrac diag dists +drinkany +drk eps eqdef equine @@ -150,7 +153,6 @@ lik linreg lipoprotein logf -lipoprotein logrank mX mathcal @@ -165,6 +167,7 @@ multivariable ndist neq np +nw overfit overset paren @@ -179,15 +182,16 @@ progestin propto qmd qquad +resid sb +sciid se -qmd -qquad sel siid simind sj slr +smk statin statins stókhos @@ -197,6 +201,7 @@ subtypes sumin surv survminer +tabset th thromboembolic thrombotic @@ -207,6 +212,7 @@ varepsilon vdots vec vx +vxi vxs vy wcgs diff --git a/renv.lock b/renv.lock index 1e7c54d1f..f7c17b4c9 100644 --- a/renv.lock +++ b/renv.lock @@ -1,11794 +1,11982 @@ { - "R": { - "Version": "4.6.0", - "Repositories": [ - { - "Name": "CRAN", - "URL": 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Since release 7.800.0, 'Armadillo' is licensed under Apache License 2; previous releases were under licensed as MPL 2.0 from version 3.800.0 onwards and LGPL-3 prior to that; 'RcppArmadillo' (the 'Rcpp' bindings/bridge to Armadillo) is licensed under the GNU GPL version 2 or later, as is the rest of 'Rcpp'.", - "License": "GPL (>= 2)", - "LazyLoad": "yes", - "Depends": [ - "R (>= 3.3.0)" - ], - "LinkingTo": [ - "Rcpp" - ], - "Imports": [ - "Rcpp (>= 1.1.1)", - "stats", - "utils", - "methods" - ], - "Suggests": [ - "tinytest", - "Matrix (>= 1.3.0)", - "pkgKitten", - "reticulate", - "slam" - ], - "URL": "https://github.com/RcppCore/RcppArmadillo, https://dirk.eddelbuettel.com/code/rcpp.armadillo.html", - "BugReports": "https://github.com/RcppCore/RcppArmadillo/issues", - "RoxygenNote": "6.0.1", - "Encoding": "UTF-8", - "VignetteBuilder": "Rcpp", - "NeedsCompilation": "yes", - "Author": "Dirk Eddelbuettel [aut, cre] (ORCID: ), Romain Francois [aut] (ORCID: ), Doug Bates [aut] (ORCID: ), Binxiang Ni [aut], Conrad Sanderson [aut] (ORCID: )", - "Maintainer": "Dirk Eddelbuettel ", - "Repository": "CRAN" - }, - "RcppEigen": { - "Package": "RcppEigen", - "Version": "0.3.4.0.2", - "Source": "Repository", - "Type": "Package", - "Title": "'Rcpp' Integration for the 'Eigen' Templated Linear Algebra Library", - "Date": "2024-08-23", - "Authors@R": "c(person(\"Doug\", \"Bates\", role = \"aut\", comment = c(ORCID = \"0000-0001-8316-9503\")), person(\"Dirk\", \"Eddelbuettel\", role = c(\"aut\", \"cre\"), email = \"edd@debian.org\", comment = c(ORCID = \"0000-0001-6419-907X\")), person(\"Romain\", \"Francois\", role = \"aut\", comment = c(ORCID = \"0000-0002-2444-4226\")), person(\"Yixuan\", \"Qiu\", role = \"aut\", comment = c(ORCID = \"0000-0003-0109-6692\")), person(\"Authors of\", \"Eigen\", role = \"cph\", comment = \"Authorship and copyright in included Eigen library as detailed in inst/COPYRIGHTS\"))", - "Copyright": "See the file COPYRIGHTS for various Eigen copyright details", - "Description": "R and 'Eigen' integration using 'Rcpp'. 'Eigen' is a C++ template library for linear algebra: matrices, vectors, numerical solvers and related algorithms. It supports dense and sparse matrices on integer, floating point and complex numbers, decompositions of such matrices, and solutions of linear systems. Its performance on many algorithms is comparable with some of the best implementations based on 'Lapack' and level-3 'BLAS'. The 'RcppEigen' package includes the header files from the 'Eigen' C++ template library. Thus users do not need to install 'Eigen' itself in order to use 'RcppEigen'. Since version 3.1.1, 'Eigen' is licensed under the Mozilla Public License (version 2); earlier version were licensed under the GNU LGPL version 3 or later. 'RcppEigen' (the 'Rcpp' bindings/bridge to 'Eigen') is licensed under the GNU GPL version 2 or later, as is the rest of 'Rcpp'.", - "License": "GPL (>= 2) | file LICENSE", - "LazyLoad": "yes", - "Depends": [ - "R (>= 3.6.0)" - ], - "LinkingTo": [ - "Rcpp" - ], - "Imports": [ - "Rcpp (>= 0.11.0)", - "stats", - "utils" - ], - "Suggests": [ - "Matrix", - "inline", - "tinytest", - "pkgKitten", - "microbenchmark" - ], - "URL": "https://github.com/RcppCore/RcppEigen, https://dirk.eddelbuettel.com/code/rcpp.eigen.html", - "BugReports": "https://github.com/RcppCore/RcppEigen/issues", - "NeedsCompilation": "yes", - "Author": "Doug Bates [aut] (), Dirk Eddelbuettel [aut, cre] (), Romain Francois [aut] (), Yixuan Qiu [aut] (), Authors of Eigen [cph] (Authorship and copyright in included Eigen library as detailed in inst/COPYRIGHTS)", - "Maintainer": "Dirk Eddelbuettel ", - "Repository": "CRAN" - }, - "RcppTOML": { - "Package": "RcppTOML", - "Version": "0.2.3", - "Source": "Repository", - "Type": "Package", - "Title": "'Rcpp' Bindings to Parser for \"Tom's Obvious Markup Language\"", - "Date": "2025-03-08", - "Authors@R": "c(person(\"Dirk\", \"Eddelbuettel\", role = c(\"aut\", \"cre\"), email = \"edd@debian.org\", comment = c(ORCID = \"0000-0001-6419-907X\")), person(\"Mark\", \"Gillard\", role = \"aut\", comment = \"Author of 'toml++' header library\"))", - "Description": "The configuration format defined by 'TOML' (which expands to \"Tom's Obvious Markup Language\") specifies an excellent format (described at ) suitable for both human editing as well as the common uses of a machine-readable format. This package uses 'Rcpp' to connect to the 'toml++' parser written by Mark Gillard to R.", - "SystemRequirements": "A C++17 compiler", - "BugReports": "https://github.com/eddelbuettel/rcpptoml/issues", - "URL": "http://dirk.eddelbuettel.com/code/rcpp.toml.html", - "Imports": [ - "Rcpp (>= 1.0.8)" - ], - "Depends": [ - "R (>= 3.3.0)" - ], - "LinkingTo": [ - "Rcpp" - ], - "Suggests": [ - "tinytest" - ], - "License": "GPL (>= 2)", - "NeedsCompilation": "yes", - "Author": "Dirk Eddelbuettel [aut, cre] (), Mark Gillard [aut] (Author of 'toml++' header library)", - "Maintainer": "Dirk Eddelbuettel ", - "Repository": "CRAN" - }, - "Rdpack": { - "Package": "Rdpack", - "Version": "2.6.6", - "Source": "Repository", - "Type": "Package", - "Title": "Update and Manipulate Rd Documentation Objects", - "Authors@R": "c( person(given = c(\"Georgi\", \"N.\"), family = \"Boshnakov\", role = c(\"aut\", \"cre\"), email = \"georgi.boshnakov@manchester.ac.uk\", comment = c(ORCID = \"0000-0003-2839-346X\")), person(given = \"Duncan\", family = \"Murdoch\", role = \"ctb\", email = \"murdoch.duncan@gmail.com\") )", - "Description": "Functions for manipulation of R documentation objects, including functions reprompt() and ereprompt() for updating 'Rd' documentation for functions, methods and classes; 'Rd' macros for citations and import of references from 'bibtex' files for use in 'Rd' files and 'roxygen2' comments; 'Rd' macros for evaluating and inserting snippets of 'R' code and the results of its evaluation or creating graphics on the fly; and many functions for manipulation of references and Rd files.", - "URL": "https://geobosh.github.io/Rdpack/ (doc), https://CRAN.R-project.org/package=Rdpack", - "BugReports": "https://github.com/GeoBosh/Rdpack/issues", - "Depends": [ - "R (>= 2.15.0)", - "methods" - ], - "Imports": [ - "tools", - "utils", - "rbibutils (> 2.4)" - ], - "Suggests": [ - "grDevices", - "testthat", - "rstudioapi", - "rprojroot", - "gbRd" - ], - "License": "GPL (>= 2)", - "LazyLoad": "yes", - "Encoding": "UTF-8", - "RoxygenNote": "7.1.1", - "NeedsCompilation": "no", - "Author": "Georgi N. Boshnakov [aut, cre] (ORCID: ), Duncan Murdoch [ctb]", - "Maintainer": "Georgi N. Boshnakov ", - "Repository": "CRAN" - }, - "S7": { - "Package": "S7", - "Version": "0.2.2", - "Source": "Repository", - "Title": "An Object Oriented System Meant to Become a Successor to S3 and S4", - "Authors@R": "c( person(\"Object-Oriented Programming Working Group\", role = \"cph\"), person(\"Davis\", \"Vaughan\", role = \"aut\"), person(\"Jim\", \"Hester\", role = \"aut\", comment = c(ORCID = \"0000-0002-2739-7082\")), person(\"Tomasz\", \"Kalinowski\", role = \"aut\"), person(\"Will\", \"Landau\", role = \"aut\"), person(\"Michael\", \"Lawrence\", role = \"aut\"), person(\"Martin\", \"Maechler\", role = \"aut\", comment = c(ORCID = \"0000-0002-8685-9910\")), person(\"Luke\", \"Tierney\", role = \"aut\"), person(\"Hadley\", \"Wickham\", , \"hadley@posit.co\", role = c(\"aut\", \"cre\"), comment = c(ORCID = \"0000-0003-4757-117X\")) )", - "Description": "A new object oriented programming system designed to be a successor to S3 and S4. It includes formal class, generic, and method specification, and a limited form of multiple dispatch. It has been designed and implemented collaboratively by the R Consortium Object-Oriented Programming Working Group, which includes representatives from R-Core, 'Bioconductor', 'Posit'/'tidyverse', and the wider R community.", - "License": "MIT + file LICENSE", - "URL": "https://rconsortium.github.io/S7/, https://github.com/RConsortium/S7", - "BugReports": "https://github.com/RConsortium/S7/issues", - "Depends": [ - "R (>= 3.5.0)" - ], - "Imports": [ - "utils" - ], - "Suggests": [ - "bench", - "callr", - "covr", - "knitr", - "methods", - "rmarkdown", - "testthat (>= 3.2.0)", - "tibble" - ], - "VignetteBuilder": "knitr", - "Config/build/compilation-database": "true", - "Config/Needs/website": "sloop", - "Config/testthat/edition": "3", - "Config/testthat/parallel": "TRUE", - "Config/testthat/start-first": "external-generic", - "Encoding": "UTF-8", - "RoxygenNote": "7.3.3", - "NeedsCompilation": "yes", - "Author": "Object-Oriented Programming Working Group [cph], Davis Vaughan [aut], Jim Hester [aut] (ORCID: ), Tomasz Kalinowski [aut], Will Landau [aut], Michael Lawrence [aut], Martin Maechler [aut] (ORCID: ), Luke Tierney [aut], Hadley Wickham [aut, cre] (ORCID: )", - "Maintainer": "Hadley Wickham ", - "Repository": "CRAN" - }, - "SparseM": { - "Package": "SparseM", - "Version": "1.84-2", - "Source": "Repository", - "Authors@R": "c( person(\"Roger\", \"Koenker\", role = c(\"cre\",\"aut\"), email = \"rkoenker@uiuc.edu\"), person(c(\"Pin\", \"Tian\"), \"Ng\", role = c(\"ctb\"), comment = \"Contributions to Sparse QR code\", email = \"pin.ng@nau.edu\") , person(\"Yousef\", \"Saad\", role = c(\"ctb\"), comment = \"author of sparskit2\") , person(\"Ben\", \"Shaby\", role = c(\"ctb\"), comment = \"author of chol2csr\") , person(\"Martin\", \"Maechler\", role = \"ctb\", comment = c(\"chol() tweaks; S4\", ORCID = \"0000-0002-8685-9910\")) )", - "Maintainer": "Roger Koenker ", - "Depends": [ - "R (>= 2.15)", - "methods" - ], - "Imports": [ - "graphics", - "stats", - "utils" - ], - "VignetteBuilder": "knitr", - "Suggests": [ - "knitr" - ], - "Description": "Some basic linear algebra functionality for sparse matrices is provided: including Cholesky decomposition and backsolving as well as standard R subsetting and Kronecker products.", - "License": "GPL (>= 2)", - "Title": "Sparse Linear Algebra", - "URL": "http://www.econ.uiuc.edu/~roger/research/sparse/sparse.html", - "NeedsCompilation": "yes", - "Author": "Roger Koenker [cre, aut], Pin Tian Ng [ctb] (Contributions to Sparse QR code), Yousef Saad [ctb] (author of sparskit2), Ben Shaby [ctb] (author of chol2csr), Martin Maechler [ctb] (chol() tweaks; S4, )", - "Repository": "CRAN" - }, - "TMB": { - "Package": "TMB", - "Version": "1.9.21", - "Source": "Repository", - "Type": "Package", - "Title": "Template Model Builder: A General Random Effect Tool Inspired by 'ADMB'", - "Date": "2026-03-22", - "Authors@R": "c(person(\"Kasper\",\"Kristensen\",role=c(\"aut\",\"cre\",\"cph\"),email=\"kaskr@dtu.dk\"), person(\"Brad\",\"Bell\",role=\"cph\"), person(\"Hans\",\"Skaug\",role=\"ctb\"), person(\"Arni\",\"Magnusson\",role=\"ctb\"), person(\"Casper\",\"Berg\",role=\"ctb\"), person(\"Anders\",\"Nielsen\",role=\"ctb\"), person(\"Martin\",\"Maechler\",role=\"ctb\"), person(\"Theo\",\"Michelot\",role=\"ctb\"), person(\"Mollie\",\"Brooks\",role=\"ctb\"), person(\"Alex\",\"Forrence\",role=\"ctb\"), person(\"Christoffer\",\"Moesgaard Albertsen\",role=\"ctb\"), person(\"Cole\",\"Monnahan\",role=\"ctb\") )", - "Maintainer": "Kasper Kristensen ", - "Author": "Kasper Kristensen [aut, cre, cph], Brad Bell [cph], Hans Skaug [ctb], Arni Magnusson [ctb], Casper Berg [ctb], Anders Nielsen [ctb], Martin Maechler [ctb], Theo Michelot [ctb], Mollie Brooks [ctb], Alex Forrence [ctb], Christoffer Moesgaard Albertsen [ctb], Cole Monnahan [ctb]", - "Copyright": "See the file COPYRIGHTS", - "Description": "With this tool, a user should be able to quickly implement complex random effect models through simple C++ templates. The package combines 'CppAD' (C++ automatic differentiation), 'Eigen' (templated matrix-vector library) and 'CHOLMOD' (sparse matrix routines available from R) to obtain an efficient implementation of the applied Laplace approximation with exact derivatives. Key features are: Automatic sparseness detection, parallelism through 'BLAS' and parallel user templates.", - "License": "GPL-2", - "URL": "https://github.com/kaskr/adcomp/wiki", - "BugReports": "https://github.com/kaskr/adcomp/issues", - "Depends": [ - "R (>= 3.0.0)" - ], - "Imports": [ - "graphics", - "methods", - "stats", - "utils", - "Matrix (>= 1.0-12)" - ], - "LinkingTo": [ - "Matrix", - "RcppEigen" - ], - "Suggests": [ - "numDeriv", - "parallel" - ], - "RoxygenNote": "7.3.3", - "NeedsCompilation": "yes", - "Repository": "CRAN" - }, - "V8": { - "Package": "V8", - "Version": "8.2.0", - "Source": "Repository", - "Type": "Package", - "Title": "Embedded JavaScript and WebAssembly Engine for R", - "Authors@R": "c( person(\"Jeroen\", \"Ooms\", role = c(\"aut\", \"cre\"), email = \"jeroenooms@gmail.com\", comment = c(ORCID = \"0000-0002-4035-0289\")), person(\"George\", \"Stagg\", role = \"ctb\", comment = c(ORCID = \"0009-0006-3173-9846\")), person(\"Jan Marvin\", \"Garbuszus\", role = \"ctb\"))", - "Description": "An R interface to V8 : Google's open source JavaScript and WebAssembly engine. This package can be compiled either with V8 or NodeJS when built as a shared library.", - "License": "MIT + file LICENSE", - "URL": "https://jeroen.r-universe.dev/V8", - "BugReports": "https://github.com/jeroen/v8/issues", - "SystemRequirements": "On Linux you can build against libv8-dev (Debian) or v8-devel (Fedora). We also provide static libv8 binaries for most platforms, see the README for details.", - "NeedsCompilation": "yes", - "VignetteBuilder": "knitr", - "Imports": [ - "Rcpp (>= 0.12.12)", - "jsonlite (>= 1.0)", - "curl (>= 1.0)", - "utils" - ], - "LinkingTo": [ - "Rcpp" - ], - "Suggests": [ - "testthat", - "knitr", - "rmarkdown" - ], - "RoxygenNote": "7.3.1", - "Language": "en-US", - "Encoding": "UTF-8", - "Biarch": "true", - "Author": "Jeroen Ooms [aut, cre] (ORCID: ), George Stagg [ctb] (ORCID: ), Jan Marvin Garbuszus [ctb]", - "Maintainer": "Jeroen Ooms ", - "Repository": "CRAN" - }, - "abind": { - "Package": "abind", - "Version": "1.4-8", - "Source": "Repository", - "Date": "2024-09-08", - "Title": "Combine Multidimensional Arrays", - "Authors@R": "c(person(\"Tony\", \"Plate\", email = \"tplate@acm.org\", role = c(\"aut\", \"cre\")), person(\"Richard\", \"Heiberger\", role = c(\"aut\")))", - "Maintainer": "Tony Plate ", - "Description": "Combine multidimensional arrays into a single array. This is a generalization of 'cbind' and 'rbind'. Works with vectors, matrices, and higher-dimensional arrays (aka tensors). Also provides functions 'adrop', 'asub', and 'afill' for manipulating, extracting and replacing data in arrays.", - "Depends": [ - "R (>= 1.5.0)" - ], - "Imports": [ - "methods", - "utils" - ], - "License": "MIT + file LICENSE", - "NeedsCompilation": "no", - "Author": "Tony Plate [aut, cre], Richard Heiberger [aut]", - "Repository": "CRAN" - }, - "arm": { - "Package": "arm", - "Version": "1.15-3", - "Source": "Repository", - "Date": "2026-4-15", - "Title": "Data Analysis Using Regression and Multilevel/Hierarchical Models", - "Authors@R": "c(person(\"Andrew\", \"Gelman\", role = \"aut\", email = \"gelman@stat.columbia.edu\"), person(\"Yu-Sung\", \"Su\", role = c(\"aut\", \"cre\"), email = \"suyusung@tsinghua.edu.cn\", comment = c(ORCID = \"0000-0001-5021-8209\")), person(\"Masanao\", \"Yajima\", role = \"ctb\", email = \"yajima@bu.edu\"), person(\"Jennifer\", \"Hill\", role = \"ctb\", email = \"jennifer.hill@nyu.edu\"), person(\"Maria Grazia\", \"Pittau\", role = \"ctb\", email = \"grazia@stat.columbia.edu\"), person(\"Jouni\", \"Kerman\", role = \"ctb\", email = \"jouni@kerman.com\"), person(\"Tian\", \"Zheng\", role = \"ctb\", email = \"tzheng@stat.columbia.edu\"), person(\"Vincent\", \"Dorie\", role = \"ctb\", email = \"vjd4@nyu.edu\") )", - "Author": "Andrew Gelman [aut], Yu-Sung Su [aut, cre] (ORCID: ), Masanao Yajima [ctb], Jennifer Hill [ctb], Maria Grazia Pittau [ctb], Jouni Kerman [ctb], Tian Zheng [ctb], Vincent Dorie [ctb]", - "Maintainer": "Yu-Sung Su ", - "BugReports": "https://github.com/suyusung/arm/issues/", - "Depends": [ - "R (>= 3.1.0)", - "MASS", - "Matrix (>= 1.6-1.1)", - "stats", - "lme4 (>= 1.0)" - ], - "Imports": [ - "abind", - "coda", - "graphics", - "grDevices", - "methods", - "nlme", - "utils" - ], - "Description": "Functions to accompany A. Gelman and J. Hill, Data Analysis Using Regression and Multilevel/Hierarchical Models, Cambridge University Press, 2007.", - "License": "GPL (>= 2)", - "URL": "https://CRAN.R-project.org/package=arm", - "NeedsCompilation": "no", - "Repository": "CRAN" - }, - "arsenal": { - "Package": "arsenal", - "Version": "3.6.3", - "Source": "Repository", - "Title": "An Arsenal of 'R' Functions for Large-Scale Statistical Summaries", - "Date": "2021-06-04", - "Authors@R": "c( person(\"Ethan\", \"Heinzen\", email = \"heinzen.ethan@mayo.edu\", role = c(\"aut\", \"cre\")), person(\"Jason\", \"Sinnwell\", role=\"aut\"), person(\"Elizabeth\", \"Atkinson\", role=\"aut\"), person(\"Tina\", \"Gunderson\", role=\"aut\"), person(\"Gregory\", \"Dougherty\", role=\"aut\"), person(\"Patrick\", \"Votruba\", role=\"ctb\"), person(\"Ryan\", \"Lennon\", role=\"ctb\"), person(\"Andrew\", \"Hanson\", role=\"ctb\"), person(\"Krista\", \"Goergen\", role=\"ctb\"), person(\"Emily\", \"Lundt\", role=\"ctb\"), person(\"Brendan\", \"Broderick\", role=\"ctb\"), person(\"Maddie\", \"McCullough\", role=\"art\") )", - "Description": "An Arsenal of 'R' functions for large-scale statistical summaries, which are streamlined to work within the latest reporting tools in 'R' and 'RStudio' and which use formulas and versatile summary statistics for summary tables and models. The primary functions include tableby(), a Table-1-like summary of multiple variable types 'by' the levels of one or more categorical variables; paired(), a Table-1-like summary of multiple variable types paired across two time points; modelsum(), which performs simple model fits on one or more endpoints for many variables (univariate or adjusted for covariates); freqlist(), a powerful frequency table across many categorical variables; comparedf(), a function for comparing data.frames; and write2(), a function to output tables to a document.", - "Suggests": [ - "broom (>= 0.7.1)", - "magrittr", - "rmarkdown", - "testthat", - "xtable", - "pander", - "survival (>= 2.43-1)", - "coin", - "pROC", - "MASS", - "splines", - "rpart", - "yaml", - "geepack" - ], - "Depends": [ - "R (>= 3.4.0)", - "stats (>= 3.4.0)" - ], - "Imports": [ - "knitr (>= 1.29)", - "utils (>= 3.4.0)" - ], - "URL": "https://github.com/mayoverse/arsenal, https://cran.r-project.org/package=arsenal, https://mayoverse.github.io/arsenal/", - "BugReports": "https://github.com/mayoverse/arsenal/issues", - "VignetteBuilder": "knitr", - "License": "GPL (>= 2)", - "RoxygenNote": "7.1.1", - "LazyData": "true", - "Encoding": "UTF-8", - "NeedsCompilation": "no", - "Author": "Ethan Heinzen [aut, cre], Jason Sinnwell [aut], Elizabeth Atkinson [aut], Tina Gunderson [aut], Gregory Dougherty [aut], Patrick Votruba [ctb], Ryan Lennon [ctb], Andrew Hanson [ctb], Krista Goergen [ctb], Emily Lundt [ctb], Brendan Broderick [ctb], Maddie McCullough [art]", - "Maintainer": "Ethan Heinzen ", - "Repository": "CRAN" - }, - "askpass": { - "Package": "askpass", - "Version": "1.2.1", - "Source": "Repository", - "Type": "Package", - "Title": "Password Entry Utilities for R, Git, and SSH", - "Authors@R": "person(\"Jeroen\", \"Ooms\", role = c(\"aut\", \"cre\"), email = \"jeroenooms@gmail.com\", comment = c(ORCID = \"0000-0002-4035-0289\"))", - "Description": "Cross-platform utilities for prompting the user for credentials or a passphrase, for example to authenticate with a server or read a protected key. Includes native programs for MacOS and Windows, hence no 'tcltk' is required. Password entry can be invoked in two different ways: directly from R via the askpass() function, or indirectly as password-entry back-end for 'ssh-agent' or 'git-credential' via the SSH_ASKPASS and GIT_ASKPASS environment variables. Thereby the user can be prompted for credentials or a passphrase if needed when R calls out to git or ssh.", - "License": "MIT + file LICENSE", - "URL": "https://r-lib.r-universe.dev/askpass", - "BugReports": "https://github.com/r-lib/askpass/issues", - "Encoding": "UTF-8", - "Imports": [ - "sys (>= 2.1)" - ], - "RoxygenNote": "7.2.3", - "Suggests": [ - "testthat" - ], - "Language": "en-US", - "NeedsCompilation": "yes", - "Author": "Jeroen Ooms [aut, cre] ()", - "Maintainer": "Jeroen Ooms ", - "Repository": "CRAN" - }, - "backports": { - "Package": "backports", - "Version": "1.5.1", - "Source": "Repository", - "Type": "Package", - "Title": "Reimplementations of Functions Introduced Since R-3.0.0", - "Authors@R": "c( person(\"Michel\", \"Lang\", NULL, \"michellang@gmail.com\", role = c(\"cre\", \"aut\"), comment = c(ORCID = \"0000-0001-9754-0393\")), person(\"Duncan\", \"Murdoch\", NULL, \"murdoch.duncan@gmail.com\", role = c(\"aut\")), person(\"R Core Team\", role = \"aut\"))", - "Maintainer": "Michel Lang ", - "Description": "Functions introduced or changed since R v3.0.0 are re-implemented in this package. 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"NeedsCompilation": "no", - "Author": "David Robinson [aut], Alex Hayes [aut] (ORCID: ), Simon Couch [aut] (ORCID: ), Emil Hvitfeldt [aut, cre] (ORCID: ), Posit Software, PBC [cph, fnd] (ROR: ), Indrajeet Patil [ctb] (ORCID: ), Derek Chiu [ctb], Matthieu Gomez [ctb], Boris Demeshev [ctb], Dieter Menne [ctb], Benjamin Nutter [ctb], Luke Johnston [ctb], Ben Bolker [ctb], Francois Briatte [ctb], Jeffrey Arnold [ctb], Jonah Gabry [ctb], Luciano Selzer [ctb], Gavin Simpson [ctb], Jens Preussner [ctb], Jay Hesselberth [ctb], Hadley Wickham [ctb], Matthew Lincoln [ctb], Alessandro Gasparini [ctb], Lukasz Komsta [ctb], Frederick Novometsky [ctb], Wilson Freitas [ctb], Michelle Evans [ctb], Jason Cory Brunson [ctb], Simon Jackson [ctb], Ben Whalley [ctb], Karissa Whiting [ctb], Yves Rosseel [ctb], Michael Kuehn [ctb], Jorge Cimentada [ctb], Erle Holgersen [ctb], Karl Dunkle Werner [ctb] (ORCID: ), Ethan Christensen [ctb], Steven Pav [ctb], Paul PJ [ctb], Ben Schneider [ctb], Patrick Kennedy [ctb], Lily Medina [ctb], Brian Fannin [ctb], Jason Muhlenkamp [ctb], Matt Lehman [ctb], Bill Denney [ctb] (ORCID: ), Nic Crane [ctb], Andrew Bates [ctb], Vincent Arel-Bundock [ctb] (ORCID: ), Hideaki Hayashi [ctb], Luis Tobalina [ctb], Annie Wang [ctb], Wei Yang Tham [ctb], Clara Wang [ctb], Abby Smith [ctb] (ORCID: ), Jasper Cooper [ctb] (ORCID: ), E Auden Krauska [ctb] (ORCID: ), Alex Wang [ctb], Malcolm Barrett [ctb] (ORCID: ), Charles Gray [ctb] (ORCID: ), Jared Wilber [ctb], Vilmantas Gegzna [ctb] (ORCID: ), Eduard Szoecs [ctb], Frederik Aust [ctb] (ORCID: ), Angus Moore [ctb], Nick Williams [ctb], Marius Barth [ctb] (ORCID: ), Bruna Wundervald [ctb] (ORCID: ), Joyce Cahoon [ctb] (ORCID: ), Grant McDermott [ctb] (ORCID: ), Kevin Zarca [ctb], Shiro Kuriwaki [ctb] (ORCID: ), Lukas Wallrich [ctb] (ORCID: ), James Martherus [ctb] (ORCID: ), Chuliang Xiao [ctb] (ORCID: ), Joseph Larmarange [ctb], Max Kuhn [ctb], Michal Bojanowski [ctb], Hakon Malmedal [ctb], Clara Wang [ctb], Sergio Oller [ctb], Luke Sonnet [ctb], Jim Hester [ctb], Ben Schneider [ctb], Bernie Gray [ctb] (ORCID: ), Mara Averick [ctb], Aaron Jacobs [ctb], Andreas Bender [ctb], Sven Templer [ctb], Paul-Christian Buerkner [ctb], Matthew Kay [ctb], Erwan Le Pennec [ctb], Johan Junkka [ctb], Hao Zhu [ctb], Benjamin Soltoff [ctb], Zoe Wilkinson Saldana [ctb], Tyler Littlefield [ctb], Charles T. Gray [ctb], Shabbh E. Banks [ctb], Serina Robinson [ctb], Roger Bivand [ctb], Riinu Ots [ctb], Nicholas Williams [ctb], Nina Jakobsen [ctb], Michael Weylandt [ctb], Lisa Lendway [ctb], Karl Hailperin [ctb], Josue Rodriguez [ctb], Jenny Bryan [ctb], Chris Jarvis [ctb], Greg Macfarlane [ctb], Brian Mannakee [ctb], Drew Tyre [ctb], Shreyas Singh [ctb], Laurens Geffert [ctb], Hong Ooi [ctb], Henrik Bengtsson [ctb], Eduard Szocs [ctb], David Hugh-Jones [ctb], Matthieu Stigler [ctb], Hugo Tavares [ctb] (ORCID: ), R. Willem Vervoort [ctb], Brenton M. Wiernik [ctb], Josh Yamamoto [ctb], Jasme Lee [ctb], Taren Sanders [ctb] (ORCID: ), Ilaria Prosdocimi [ctb] (ORCID: ), Daniel D. Sjoberg [ctb] (ORCID: ), Alex Reinhart [ctb] (ORCID: )", - "Maintainer": "Emil Hvitfeldt ", - "Repository": "CRAN" - }, - "broom.helpers": { - "Package": "broom.helpers", - "Version": "1.22.0", - "Source": "Repository", - "Title": "Helpers for Model Coefficients Tibbles", - "Authors@R": "c( person(\"Joseph\", \"Larmarange\", , \"joseph@larmarange.net\", role = c(\"aut\", \"cre\"), comment = c(ORCID = \"0000-0001-7097-700X\")), person(\"Daniel D.\", \"Sjoberg\", , \"danield.sjoberg@gmail.com\", role = \"aut\", comment = c(ORCID = \"0000-0003-0862-2018\")) )", - "Description": "Provides suite of functions to work with regression model 'broom::tidy()' tibbles. 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(2020, Journal of Statistical Software, ).", - "Depends": [ - "R (>= 3.0.0)", - "methods" - ], - "Imports": [ - "graphics", - "grDevices", - "stats" - ], - "Suggests": [ - "datasets", - "utils", - "KernSmooth", - "MASS", - "kernlab", - "mvtnorm", - "vcd", - "tcltk", - "shiny", - "shinyjs", - "ggplot2", - "dplyr", - "scales", - "grid", - "png", - "jpeg", - "knitr", - "rmarkdown", - "RColorBrewer", - "rcartocolor", - "scico", - "viridis", - "wesanderson" - ], - "VignetteBuilder": "knitr", - "License": "BSD_3_clause + file LICENSE", - "URL": "https://colorspace.R-Forge.R-project.org/, https://hclwizard.org/", - "BugReports": "https://colorspace.R-Forge.R-project.org/contact.html", - "LazyData": "yes", - "Encoding": "UTF-8", - "RoxygenNote": "7.3.2", - "NeedsCompilation": "yes", - "Author": "Ross Ihaka [aut], Paul Murrell [aut] (ORCID: ), Kurt Hornik [aut] (ORCID: ), Jason C. Fisher [aut] (ORCID: ), Reto Stauffer [aut] (ORCID: ), Claus O. Wilke [aut] (ORCID: ), Claire D. 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It has also been used extensively in the book Fundamentals of Data Visualization.", - "URL": "https://wilkelab.org/cowplot/", - "BugReports": "https://github.com/wilkelab/cowplot/issues", - "Depends": [ - "R (>= 3.5.0)" - ], - "Imports": [ - "ggplot2 (>= 3.5.2)", - "grid", - "gtable", - "grDevices", - "methods", - "rlang", - "scales" - ], - "License": "GPL-2", - "Suggests": [ - "Cairo", - "covr", - "dplyr", - "forcats", - "gridGraphics (>= 0.4-0)", - "knitr", - "lattice", - "magick", - "maps", - "PASWR", - "patchwork", - "rmarkdown", - "ragg", - "testthat (>= 1.0.0)", - "tidyr", - "vdiffr (>= 0.3.0)", - "VennDiagram" - ], - "VignetteBuilder": "knitr", - "Collate": "'add_sub.R' 'align_plots.R' 'as_grob.R' 'as_gtable.R' 'axis_canvas.R' 'cowplot.R' 'draw.R' 'get_plot_component.R' 'get_axes.R' 'get_titles.R' 'get_legend.R' 'get_panel.R' 'gtable.R' 'key_glyph.R' 'plot_grid.R' 'save.R' 'set_null_device.R' 'setup.R' 'stamp.R' 'themes.R' 'utils_ggplot2.R'", - "RoxygenNote": "7.3.2", - "Encoding": "UTF-8", - "NeedsCompilation": "no", - "Author": "Claus O. 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"NeedsCompilation": "no", - "Author": "Hadley Wickham [aut] (ORCID: ), Winston Chang [aut] (ORCID: ), Lionel Henry [aut], Thomas Lin Pedersen [aut, cre] (ORCID: ), Kohske Takahashi [aut], Claus Wilke [aut] (ORCID: ), Kara Woo [aut] (ORCID: ), Hiroaki Yutani [aut] (ORCID: ), Dewey Dunnington [aut] (ORCID: ), Teun van den Brand [aut] (ORCID: ), Posit, PBC [cph, fnd] (ROR: )", - "Maintainer": "Thomas Lin Pedersen ", - "Repository": "CRAN" - }, - "ggpubr": { - "Package": "ggpubr", - "Version": "0.6.3", - "Source": "Repository", - "Type": "Package", - "Title": "'ggplot2' Based Publication Ready Plots", - "Authors@R": "c( person(\"Alboukadel\", \"Kassambara\", role = c(\"aut\", \"cre\"), email = \"alboukadel.kassambara@gmail.com\"), person(\"Laszlo\", \"Erdey\", role = \"ctb\", email = \"erdey.laszlo@econ.unideb.hu\", comment = \"Faculty of Economics and Business, University of Debrecen, Hungary\"))", - "Description": "The 'ggplot2' package is excellent and flexible for elegant data visualization in R. 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"Title": "Automatically Position Non-Overlapping Text Labels with 'ggplot2'", - "Description": "Provides text and label geoms for 'ggplot2' that help to avoid overlapping text labels. 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This package provides an easy way to indicate if two groups are significantly different. Commonly this is shown by a bracket on top connecting the groups of interest which itself is annotated with the level of significance (NS, *, **, ***). The package provides a single layer (geom_signif()) that takes the groups for comparison and the test (t.test(), wilcox.text() etc.) as arguments and adds the annotation to the plot.", - "License": "GPL-3 | file LICENSE", - "URL": "https://const-ae.github.io/ggsignif/, https://github.com/const-ae/ggsignif", - "VignetteBuilder": "knitr", - "Encoding": "UTF-8", - "Language": "en-US", - "Imports": [ - "ggplot2 (>= 3.3.5)" - ], - "Suggests": [ - "knitr", - "rmarkdown", - "testthat", - "vdiffr (>= 1.0.2)" - ], - "RoxygenNote": "7.2.1", - "Config/testthat/edition": "3", - "Config/testthat/parallel": "true", - "NeedsCompilation": "no", - "Author": "Constantin Ahlmann-Eltze [aut, cre, ctb] (, @const_ae), Indrajeet Patil [aut, ctb] (, @patilindrajeets)", - "Maintainer": "Constantin Ahlmann-Eltze ", - "Repository": "CRAN" - }, - "ggtext": { - "Package": "ggtext", - "Version": "0.1.2", - "Source": "Repository", - "Type": "Package", - "Title": "Improved Text Rendering Support for 'ggplot2'", - "Authors@R": "c( person( given = \"Claus O.\", family = \"Wilke\", role = c(\"aut\"), email = \"wilke@austin.utexas.edu\", comment = c(ORCID = \"0000-0002-7470-9261\") ), person( given = \"Brenton M.\", family = \"Wiernik\", role = c(\"aut\", \"cre\"), email = \"brenton@wiernik.org\", comment = c(ORCID = \"0000-0001-9560-6336\", Twitter = \"@bmwiernik\") ) )", - "Description": "A 'ggplot2' extension that enables the rendering of complex formatted plot labels (titles, subtitles, facet labels, axis labels, etc.). Text boxes with automatic word wrap are also supported.", - "URL": "https://wilkelab.org/ggtext/", - "BugReports": "https://github.com/wilkelab/ggtext/issues", - "License": "GPL-2", - "Depends": [ - "R (>= 3.5)" - ], - "Imports": [ - "ggplot2 (>= 3.3.0)", - "grid", - "gridtext", - "rlang", - "scales" - ], - "Suggests": [ - "cowplot", - "dplyr", - "glue", - "knitr", - "rmarkdown", - "testthat", - "vdiffr" - ], - "Encoding": "UTF-8", - "RoxygenNote": "7.1.1", - "VignetteBuilder": "knitr", - "NeedsCompilation": "no", - "Author": "Claus O. Wilke [aut] (), Brenton M. Wiernik [aut, cre] (, @bmwiernik)", - "Maintainer": "Brenton M. 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Manage 'GitHub' tokens and other 'git' credentials. This package is to be used by other packages that need to authenticate to 'GitHub' and/or other 'git' repositories.", - "License": "MIT + file LICENSE", - "URL": "https://gitcreds.r-lib.org/, https://github.com/r-lib/gitcreds", - "BugReports": "https://github.com/r-lib/gitcreds/issues", - "Depends": [ - "R (>= 3.4)" - ], - "Suggests": [ - "codetools", - "covr", - "knitr", - "mockery", - "oskeyring", - "rmarkdown", - "testthat (>= 3.0.0)", - "withr" - ], - "VignetteBuilder": "knitr", - "Config/Needs/website": "tidyverse/tidytemplate", - "Encoding": "UTF-8", - "RoxygenNote": "7.2.1.9000", - "SystemRequirements": "git", - "Config/testthat/edition": "3", - "NeedsCompilation": "no", - "Author": "Gábor Csárdi [aut, cre], RStudio [cph, fnd]", - "Maintainer": "Gábor Csárdi ", - "Repository": "CRAN" - }, - "glmmTMB": { - "Package": "glmmTMB", - "Version": "1.1.14", - "Source": "Repository", - "Title": "Generalized Linear Mixed Models using Template Model Builder", - "Authors@R": "c(person(\"Mollie\",\"Brooks\", comment=c(ORCID=\"0000-0001-6963-8326\"), role = c(\"aut\", \"cre\"), email = \"mollieebrooks@gmail.com\"), person(\"Ben\",\"Bolker\", role=\"aut\", comment=c(ORCID=\"0000-0002-2127-0443\")), person(\"Kasper\",\"Kristensen\",role=\"aut\"), person(\"Martin\",\"Maechler\", role=\"aut\", comment=c(ORCID=\"0000-0002-8685-9910\")), person(\"Arni\",\"Magnusson\", role=\"aut\", comment=c(ORCID=\"0000-0003-2769-6741\")), person(\"Maeve\",\"McGillycuddy\", role=\"ctb\"), person(\"Hans\",\"Skaug\",role=\"aut\", comment=c(ORCID=\"0000-0003-4235-2592\")), person(\"Anders\",\"Nielsen\", role=\"aut\", comment=c(ORCID=\"0000-0001-9683-9262\")), person(\"Casper\",\"Berg\", role=\"aut\", comment=c(ORCID=\"0000-0002-3812-5269\")), person(\"Koen\",\"van Bentham\", role=\"aut\"), person(\"Nafis\",\"Sadat\",role=\"ctb\", comment=c(ORCID=\"0000-0001-5715-616X\")), person(\"Daniel\",\"Lüdecke\", role=\"ctb\", comment=c(ORCID=\"0000-0002-8895-3206\")), person(\"Russ\",\"Lenth\", role=\"ctb\"), person(\"Joseph\", \"O'Brien\", role = \"ctb\", comment = c(ORCID = \"0000-0001-9851-5077\")), person(\"Charles J.\",\"Geyer\", role=\"ctb\"), person(\"Mikael\",\"Jagan\", role=\"ctb\", comment = c(ORCID = \"0000-0002-3542-2938\")), person(\"Brenton\", \"Wiernik\", role=\"ctb\", comment = c(ORCID = \"0000-0001-9560-6336\")), person(\"Daniel B.\", \"Stouffer\", role=\"ctb\", comment = c(ORCID = \"0000-0001-9436-9674\")), person(\"Michael\", \"Agronah\", role = \"ctb\", comment = c(ORCID = \"0009-0007-2655-4094\")), person(\"Hatice Tül Kübra\", \"Akdur\", role = \"ctb\", comment = c(ORCID = \"0000-0003-2144-0518\")), person(\"Daniel\", \"Sabanés Bové\", role = \"ctb\", comment = c(ORCID = \"0000-0002-0176-9239\")), person(\"Nikolas\", \"Krieger\", role = \"ctb\", comment = c(ORCID = \"0000-0002-4581-3545\")), person(\"Coralie\", \"Williams\", role = \"ctb\", comment = c(ORCID = \"0000-0003-1312-4953\")) )", - "Description": "Fit linear and generalized linear mixed models with various extensions, including zero-inflation. The models are fitted using maximum likelihood estimation via 'TMB' (Template Model Builder). Random effects are assumed to be Gaussian on the scale of the linear predictor and are integrated out using the Laplace approximation. Gradients are calculated using automatic differentiation.", - "License": "AGPL-3", - "Depends": [ - "R (>= 3.6.0)" - ], - "Imports": [ - "methods", - "TMB (>= 1.9.0)", - "lme4 (>= 1.1-18.9000)", - "Matrix", - "nlme", - "numDeriv", - "mgcv", - "reformulas (>= 0.4.3.1)", - "pbkrtest", - "sandwich" - ], - "LinkingTo": [ - "TMB", - "RcppEigen" - ], - "Suggests": [ - "knitr", - "rmarkdown", - "testthat", - "MASS", - "lattice", - "ggplot2 (>= 2.2.1)", - "mlmRev", - "bbmle (>= 1.0.19)", - "pscl", - "coda", - "reshape2", - "car (>= 3.0.6)", - "emmeans (>= 1.4)", - "estimability", - "DHARMa", - "multcomp", - "MuMIn", - "effects (>= 4.0-1)", - "dotwhisker", - "broom", - "broom.mixed", - "plyr", - "png", - "boot", - "texreg", - "xtable", - "huxtable", - "parallel", - "blme", - "purrr", - "dplyr", - "ade4", - "ape", - "gsl", - "lmerTest", - "metafor" - ], - "SystemRequirements": "GNU make", - "VignetteBuilder": "knitr, rmarkdown", - "URL": "https://github.com/glmmTMB/glmmTMB", - "LazyData": "TRUE", - "BugReports": "https://github.com/glmmTMB/glmmTMB/issues", - "NeedsCompilation": "yes", - "Encoding": "UTF-8", - "RoxygenNote": "7.3.3", - "Author": "Mollie Brooks [aut, cre] (ORCID: ), Ben Bolker [aut] (ORCID: ), Kasper Kristensen [aut], Martin Maechler [aut] (ORCID: ), Arni Magnusson [aut] (ORCID: ), Maeve McGillycuddy [ctb], Hans Skaug [aut] (ORCID: ), Anders Nielsen [aut] (ORCID: ), Casper Berg [aut] (ORCID: ), Koen van Bentham [aut], Nafis Sadat [ctb] (ORCID: ), Daniel Lüdecke [ctb] (ORCID: ), Russ Lenth [ctb], Joseph O'Brien [ctb] (ORCID: ), Charles J. Geyer [ctb], Mikael Jagan [ctb] (ORCID: ), Brenton Wiernik [ctb] (ORCID: ), Daniel B. Stouffer [ctb] (ORCID: ), Michael Agronah [ctb] (ORCID: ), Hatice Tül Kübra Akdur [ctb] (ORCID: ), Daniel Sabanés Bové [ctb] (ORCID: ), Nikolas Krieger [ctb] (ORCID: ), Coralie Williams [ctb] (ORCID: )", - "Maintainer": "Mollie Brooks ", - "Repository": "CRAN" - }, - "glmnet": { - "Package": "glmnet", - "Version": "4.1-10", - "Source": "Repository", - "Type": "Package", - "Title": "Lasso and Elastic-Net Regularized Generalized Linear Models", - "Date": "2025-07-15", - "Authors@R": "c(person(\"Jerome\", \"Friedman\", role=c(\"aut\")), person(\"Trevor\", \"Hastie\", role=c(\"aut\", \"cre\"), email = \"hastie@stanford.edu\"), person(\"Rob\", \"Tibshirani\", role=c(\"aut\")), person(\"Balasubramanian\", \"Narasimhan\", role=c(\"aut\")), person(\"Kenneth\",\"Tay\",role=c(\"aut\")), person(\"Noah\", \"Simon\", role=c(\"aut\")), person(\"Junyang\", \"Qian\", role=c(\"ctb\")), person(\"James\", \"Yang\", role=c(\"aut\")))", - "Depends": [ - "R (>= 3.6.0)", - "Matrix (>= 1.0-6)" - ], - "Imports": [ - "methods", - "utils", - "foreach", - "shape", - "survival", - "Rcpp" - ], - "Suggests": [ - "knitr", - "lars", - "testthat", - "xfun", - "rmarkdown" - ], - "SystemRequirements": "C++17", - "Description": "Extremely efficient procedures for fitting the entire lasso or elastic-net regularization path for linear regression, logistic and multinomial regression models, Poisson regression, Cox model, multiple-response Gaussian, and the grouped multinomial regression; see and . There are two new and important additions. The family argument can be a GLM family object, which opens the door to any programmed family (). This comes with a modest computational cost, so when the built-in families suffice, they should be used instead. The other novelty is the relax option, which refits each of the active sets in the path unpenalized. 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The \"v4\" refers to the fact that the Sheets API is currently at version 4. This package can read and write both the metadata and the cell data in a Sheet.", - "License": "MIT + file LICENSE", - "URL": "https://googlesheets4.tidyverse.org, https://github.com/tidyverse/googlesheets4", - "BugReports": "https://github.com/tidyverse/googlesheets4/issues", - "Depends": [ - "R (>= 3.6)" - ], - "Imports": [ - "cellranger", - "cli (>= 3.0.0)", - "curl", - "gargle (>= 1.6.0)", - "glue (>= 1.3.0)", - "googledrive (>= 2.1.0)", - "httr", - "ids", - "lifecycle", - "magrittr", - "methods", - "purrr", - "rematch2", - "rlang (>= 1.0.2)", - "tibble (>= 2.1.1)", - "utils", - "vctrs (>= 0.2.3)", - "withr" - ], - "Suggests": [ - "readr", - "rmarkdown", - "spelling", - "testthat (>= 3.1.7)" - ], - "ByteCompile": "true", - "Config/Needs/website": "tidyverse, tidyverse/tidytemplate", - "Config/testthat/edition": "3", - "Encoding": "UTF-8", - "Language": "en-US", - "RoxygenNote": "7.3.2.9000", - "NeedsCompilation": "no", - "Author": "Jennifer Bryan [cre, aut] (ORCID: ), Posit Software, PBC [cph, fnd]", - "Maintainer": "Jennifer Bryan ", - "Repository": "CRAN" - }, - "graphlayouts": { - "Package": "graphlayouts", - "Version": "1.2.3", - "Source": "Repository", - "Title": "Additional Layout Algorithms for Network Visualizations", - "Authors@R": "person(\"David\", \"Schoch\", email = \"david@schochastics.net\", role = c(\"aut\", \"cre\"), comment = c(ORCID = \"0000-0003-2952-4812\"))", - "Description": "Several new layout algorithms to visualize networks are provided which are not part of 'igraph'. 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Text can be formatted via a minimal subset of 'Markdown', 'HTML', and inline 'CSS' directives, and it can be rendered both with and without word wrap.", - "URL": "https://wilkelab.org/gridtext/", - "BugReports": "https://github.com/wilkelab/gridtext/issues", - "License": "MIT + file LICENSE", - "Depends": [ - "R (>= 3.5)" - ], - "Imports": [ - "curl", - "grid", - "grDevices", - "markdown", - "rlang", - "Rcpp", - "png", - "jpeg", - "stringr", - "xml2" - ], - "Suggests": [ - "covr", - "knitr", - "rmarkdown", - "testthat", - "vdiffr" - ], - "LinkingTo": [ - "Rcpp" - ], - "Encoding": "UTF-8", - "RoxygenNote": "7.1.1", - "NeedsCompilation": "yes", - "Author": "Claus O. Wilke [aut] (ORCID: ), Brenton M. Wiernik [aut, cre] (ORCID: , Twitter: @bmwiernik)", - "Maintainer": "Brenton M. 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With its progressive approach, we can construct display tables with a cohesive set of table parts. Table values can be formatted using any of the included formatting functions. Footnotes and cell styles can be precisely added through a location targeting system. The way in which 'gt' handles things for you means that you don't often have to worry about the fine details.", - "License": "MIT + file LICENSE", - "URL": "https://gt.rstudio.com, https://github.com/rstudio/gt", - "BugReports": "https://github.com/rstudio/gt/issues", - "Depends": [ - "R (>= 4.1.0)" - ], - "Imports": [ - "base64enc (>= 0.1-3)", - "bigD (>= 0.2)", - "bitops (>= 1.0-7)", - "cli (>= 3.6.3)", - "commonmark (>= 1.9.1)", - "dplyr (>= 1.1.4)", - "fs (>= 1.6.4)", - "glue (>= 1.8.0)", - "htmltools (>= 0.5.8.1)", - "htmlwidgets (>= 1.6.4)", - "juicyjuice (>= 0.1.0)", - "magrittr (>= 2.0.3)", - "markdown (>= 1.13)", - "reactable (>= 0.4.4)", - "rlang (>= 1.1.4)", - "sass (>= 0.4.9)", - "scales (>= 1.3.0)", - "tidyselect (>= 1.2.1)", - "vctrs", - "xml2 (>= 1.3.6)" - ], - "Suggests": [ - "bit64", - "farver", - "fontawesome (>= 0.5.2)", - "ggplot2", - "grid", - "gtable (>= 0.3.6)", - "katex (>= 1.4.1)", - "knitr", - "lubridate", - "magick", - "paletteer", - "RColorBrewer", - "rmarkdown (>= 2.20)", - "rsvg", - "rvest", - "shiny (>= 1.9.1)", - "testthat (>= 3.1.9)", - "tidyr (>= 1.0.0)", - "webshot2 (>= 0.1.0)", - "withr" - ], - "Config/Needs/coverage": "officer", - "Config/Needs/website": "quarto", - "ByteCompile": "true", - "Config/testthat/edition": "3", - "Config/testthat/parallel": "true", - "Encoding": "UTF-8", - "LazyData": "true", - "RoxygenNote": "7.3.3", - "NeedsCompilation": "no", - "Author": "Richard Iannone [aut, cre] (ORCID: ), Joe Cheng [aut], Barret Schloerke [aut] (ORCID: ), Shannon Haughton [aut], Ellis Hughes [aut] (ORCID: ), Alexandra Lauer [aut] (ORCID: ), Romain François [aut], JooYoung Seo [aut] (ORCID: ), Ken Brevoort [aut] (ORCID: ), Olivier Roy [aut], Posit Software, PBC [cph, fnd]", - "Maintainer": "Richard Iannone ", - "Repository": "CRAN" - }, - "gtable": { - "Package": "gtable", - "Version": "0.3.6", - "Source": "Repository", - "Title": "Arrange 'Grobs' in Tables", - "Authors@R": "c( person(\"Hadley\", \"Wickham\", , \"hadley@posit.co\", role = \"aut\"), person(\"Thomas Lin\", \"Pedersen\", , \"thomas.pedersen@posit.co\", role = c(\"aut\", \"cre\")), person(\"Posit Software, PBC\", role = c(\"cph\", \"fnd\")) )", - "Description": "Tools to make it easier to work with \"tables\" of 'grobs'. The 'gtable' package defines a 'gtable' grob class that specifies a grid along with a list of grobs and their placement in the grid. Further the package makes it easy to manipulate and combine 'gtable' objects so that complex compositions can be built up sequentially.", - "License": "MIT + file LICENSE", - "URL": "https://gtable.r-lib.org, https://github.com/r-lib/gtable", - "BugReports": "https://github.com/r-lib/gtable/issues", - "Depends": [ - "R (>= 4.0)" - ], - "Imports": [ - "cli", - "glue", - "grid", - "lifecycle", - "rlang (>= 1.1.0)", - "stats" - ], - "Suggests": [ - "covr", - "ggplot2", - "knitr", - "profvis", - "rmarkdown", - "testthat (>= 3.0.0)" - ], - "VignetteBuilder": "knitr", - "Config/Needs/website": "tidyverse/tidytemplate", - "Config/testthat/edition": "3", - "Config/usethis/last-upkeep": "2024-10-25", - "Encoding": "UTF-8", - "RoxygenNote": "7.3.2", - "NeedsCompilation": "no", - "Author": "Hadley Wickham [aut], Thomas Lin Pedersen [aut, cre], Posit Software, PBC [cph, fnd]", - "Maintainer": "Thomas Lin Pedersen ", - "Repository": "CRAN" - }, - "gtsummary": { - "Package": "gtsummary", - "Version": "2.5.0.9004", - "Source": "GitHub", - "Title": "Presentation-Ready Data Summary and Analytic Result Tables", - "Authors@R": "c( person(\"Daniel D.\", \"Sjoberg\", , \"danield.sjoberg@gmail.com\", role = c(\"aut\", \"cre\"), comment = c(ORCID = \"0000-0003-0862-2018\")), person(\"Joseph\", \"Larmarange\", role = \"aut\", comment = c(ORCID = \"0000-0001-7097-700X\")), person(\"Michael\", \"Curry\", role = \"aut\", comment = c(ORCID = \"0000-0002-0261-4044\")), person(\"Emily\", \"de la Rua\", , role = \"aut\", comment = c(ORCID = \"0009-0000-8738-5561\")), person(\"Jessica\", \"Lavery\", role = \"aut\", comment = c(ORCID = \"0000-0002-2746-5647\")), person(\"Karissa\", \"Whiting\", role = \"aut\", comment = c(ORCID = \"0000-0002-4683-1868\")), person(\"Emily C.\", \"Zabor\", role = \"aut\", comment = c(ORCID = \"0000-0002-1402-4498\")), person(\"Xing\", \"Bai\", role = \"ctb\"), person(\"Malcolm\", \"Barrett\", role = \"ctb\", comment = c(ORCID = \"0000-0003-0299-5825\")), person(\"Esther\", \"Drill\", role = \"ctb\", comment = c(ORCID = \"0000-0002-3315-4538\")), person(\"Jessica\", \"Flynn\", role = \"ctb\", comment = c(ORCID = \"0000-0001-8310-6684\")), person(\"Margie\", \"Hannum\", role = \"ctb\", comment = c(ORCID = \"0000-0002-2953-0449\")), person(\"Stephanie\", \"Lobaugh\", role = \"ctb\"), person(\"Shannon\", \"Pileggi\", role = \"ctb\", comment = c(ORCID = \"0000-0002-7732-4164\")), person(\"Amy\", \"Tin\", role = \"ctb\", comment = c(ORCID = \"0000-0002-8005-0694\")), person(\"Gustavo\", \"Zapata Wainberg\", role = \"ctb\", comment = c(ORCID = \"0000-0002-2524-3637\")) )", - "Description": "Creates presentation-ready tables summarizing data sets, regression models, and more. The code to create the tables is concise and highly customizable. Data frames can be summarized with any function, e.g. mean(), median(), even user-written functions. Regression models are summarized and include the reference rows for categorical variables. Common regression models, such as logistic regression and Cox proportional hazards regression, are automatically identified and the tables are pre-filled with appropriate column headers.", - "License": "MIT + file LICENSE", - "URL": "https://github.com/ddsjoberg/gtsummary, https://www.danieldsjoberg.com/gtsummary/", - "BugReports": "https://github.com/ddsjoberg/gtsummary/issues", - "Depends": [ - "R (>= 4.2)" - ], - "Imports": [ - "cards (>= 0.7.1.9008)", - "cardx (>= 0.3.2.9000)", - "cli (>= 3.6.3)", - "dplyr (>= 1.1.3)", - "glue (>= 1.8.0)", - "gt (>= 0.11.1)", - "lifecycle (>= 1.0.3)", - "rlang (>= 1.1.1)", - "tidyr (>= 1.3.0)", - "vctrs (>= 0.6.4)" - ], - "Suggests": [ - "aod (>= 1.3.3)", - "broom (>= 1.0.5)", - "broom.helpers (>= 1.20.0)", - "broom.mixed (>= 0.2.9)", - "car (>= 3.0-11)", - "cmprsk", - "effectsize (>= 0.6.0)", - "emmeans (>= 1.7.3)", - "flextable (>= 0.8.1)", - "geepack (>= 1.3.10)", - "ggstats (>= 0.2.1)", - "huxtable (>= 5.4.0)", - "insight (>= 0.15.0)", - "kableExtra (>= 1.3.4)", - "knitr (>= 1.37)", - "lme4 (>= 1.1-31)", - "mice (>= 3.10.0)", - "nnet", - "officer", - "openxlsx", - "parameters (>= 0.20.2)", - "parsnip (>= 0.1.7)", - "rmarkdown", - "smd (>= 0.6.6)", - "spelling", - "survey (>= 4.2)", - "survival (>= 3.6-4)", - "testthat (>= 3.2.0)", - "withr (>= 2.5.0)", - "workflows (>= 0.2.4)" - ], - "VignetteBuilder": "knitr", - "Config/Needs/check": "hms", - "Config/Needs/website": "forcats, sandwich, scales", - "Config/testthat/edition": "3", - "Config/testthat/parallel": "true", - "Encoding": "UTF-8", - "Language": "en-US", - "LazyData": "true", - "Roxygen": "list(markdown = TRUE)", - "RoxygenNote": "7.3.3", - "Author": "Daniel D. 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Declare the relative path of a file within your project with 'i_am()'. Use the 'here()' function as a drop-in replacement for 'file.path()', it will always locate the files relative to your project root.", - "License": "MIT + file LICENSE", - "URL": "https://here.r-lib.org/, https://github.com/r-lib/here", - "BugReports": "https://github.com/r-lib/here/issues", - "Imports": [ - "rprojroot (>= 2.1.0)" - ], - "Suggests": [ - "conflicted", - "covr", - "fs", - "knitr", - "palmerpenguins", - "plyr", - "readr", - "rlang", - "rmarkdown", - "testthat", - "uuid", - "withr" - ], - "VignetteBuilder": "knitr", - "Encoding": "UTF-8", - "RoxygenNote": "7.3.3.9000", - "Config/testthat/edition": "3", - "Config/Needs/website": "tidyverse/tidytemplate", - "NeedsCompilation": "no", - "Author": "Kirill Müller [aut, cre] (ORCID: ), Jennifer Bryan [ctb] (ORCID: )", - "Maintainer": "Kirill Müller ", - "Repository": "CRAN" - }, - "highr": { - "Package": "highr", - "Version": "0.12", - "Source": "Repository", - "Type": "Package", - "Title": "Syntax Highlighting for R Source Code", - "Authors@R": "c( person(\"Yihui\", \"Xie\", role = c(\"aut\", \"cre\"), email = \"xie@yihui.name\", comment = c(ORCID = \"0000-0003-0645-5666\")), person(\"Yixuan\", \"Qiu\", role = \"aut\"), person(\"Christopher\", \"Gandrud\", role = \"ctb\"), person(\"Qiang\", \"Li\", role = \"ctb\") )", - "Description": "Provides syntax highlighting for R source code. Currently it supports LaTeX and HTML output. Source code of other languages is supported via Andre Simon's highlight package ().", - "Depends": [ - "R (>= 3.3.0)" - ], - "Imports": [ - "xfun (>= 0.18)" - ], - "Suggests": [ - "knitr", - "markdown", - "testit" - ], - "License": "GPL", - "URL": "https://github.com/yihui/highr", - "BugReports": "https://github.com/yihui/highr/issues", - "VignetteBuilder": "knitr", - "Encoding": "UTF-8", - "RoxygenNote": "7.3.3", - "NeedsCompilation": "no", - "Author": "Yihui Xie [aut, cre] (ORCID: ), Yixuan Qiu [aut], Christopher Gandrud [ctb], Qiang Li [ctb]", - "Maintainer": "Yihui Xie ", - "Repository": "CRAN" - }, - "hms": { - "Package": "hms", - "Version": "1.1.4", - "Source": "Repository", - "Title": "Pretty Time of Day", - "Date": "2025-10-11", - "Authors@R": "c( person(\"Kirill\", \"Müller\", , \"kirill@cynkra.com\", role = c(\"aut\", \"cre\"), comment = c(ORCID = \"0000-0002-1416-3412\")), person(\"R Consortium\", role = \"fnd\"), person(\"Posit Software, PBC\", role = \"fnd\", comment = c(ROR = \"03wc8by49\")) )", - 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"Description": "Provides low-level socket and protocol support for handling HTTP and WebSocket requests directly from within R. It is primarily intended as a building block for other packages, rather than making it particularly easy to create complete web applications using httpuv alone. httpuv is built on top of the libuv and http-parser C libraries, both of which were developed by Joyent, Inc. (See LICENSE file for libuv and http-parser license information.)", - "License": "GPL (>= 2) | file LICENSE", - "URL": "https://rstudio.github.io/httpuv/, https://github.com/rstudio/httpuv", - "BugReports": "https://github.com/rstudio/httpuv/issues", - "Depends": [ - "R (>= 2.15.1)" - ], - "Imports": [ - "later (>= 0.8.0)", - "promises", - "R6", - "Rcpp (>= 1.0.7)", - "utils" - ], - "Suggests": [ - "callr", - "curl", - "jsonlite", - "testthat (>= 3.0.0)", - "websocket" - ], - "LinkingTo": [ - "later", - "Rcpp" - ], - "Config/Needs/website": "tidyverse/tidytemplate", - "Config/testthat/edition": "3", - "Config/usethis/last-upkeep": "2025-07-01", - "Encoding": "UTF-8", - "RoxygenNote": "7.3.3", - "SystemRequirements": "GNU make, zlib", - "Collate": "'RcppExports.R' 'httpuv-package.R' 'httpuv.R' 'random_port.R' 'server.R' 'staticServer.R' 'static_paths.R' 'utils.R'", - "NeedsCompilation": "yes", - "Author": "Joe Cheng [aut], Winston Chang [aut, cre], Posit, PBC [cph, fnd] (ROR: ), Hector Corrada Bravo [ctb], Jeroen Ooms [ctb], Andrzej Krzemienski [cph] (optional.hpp), libuv project contributors [cph] (libuv library, see src/libuv/AUTHORS file), Joyent, Inc. and other Node contributors [cph] (libuv library, see src/libuv/AUTHORS file; and http-parser library, see src/http-parser/AUTHORS file), Niels Provos [cph] (libuv subcomponent: tree.h), Internet Systems Consortium, Inc. [cph] (libuv subcomponent: inet_pton and inet_ntop, contained in src/libuv/src/inet.c), Alexander Chemeris [cph] (libuv subcomponent: stdint-msvc2008.h (from msinttypes)), Google, Inc. [cph] (libuv subcomponent: pthread-fixes.c), Sony Mobile Communcations AB [cph] (libuv subcomponent: pthread-fixes.c), Berkeley Software Design Inc. 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Configuration functions make it easy to control additional request components (authenticate(), add_headers() and so on).", - "License": "MIT + file LICENSE", - "URL": "https://httr.r-lib.org/, https://github.com/r-lib/httr", - "BugReports": "https://github.com/r-lib/httr/issues", - "Depends": [ - "R (>= 3.6)" - ], - "Imports": [ - "curl (>= 5.1.0)", - "jsonlite", - "mime", - "openssl (>= 0.8)", - "R6" - ], - "Suggests": [ - "covr", - "httpuv", - "jpeg", - "knitr", - "png", - "readr", - "rmarkdown", - "testthat (>= 0.8.0)", - "xml2" - ], - "VignetteBuilder": "knitr", - "Config/Needs/website": "tidyverse/tidytemplate", - "Encoding": "UTF-8", - "RoxygenNote": "7.3.3", - "NeedsCompilation": "no", - "Author": "Hadley Wickham [aut, cre], Posit Software, PBC [cph, fnd]", - "Maintainer": "Hadley Wickham ", - "Repository": "CRAN" - }, - "httr2": { - "Package": "httr2", - "Version": "1.2.2", - "Source": "Repository", - "Title": "Perform HTTP Requests and Process the Responses", - "Authors@R": "c( person(\"Hadley\", \"Wickham\", , \"hadley@posit.co\", role = c(\"aut\", \"cre\")), person(\"Posit Software, PBC\", role = c(\"cph\", \"fnd\")), person(\"Maximilian\", \"Girlich\", role = \"ctb\") )", - "Description": "Tools for creating and modifying HTTP requests, then performing them and processing the results. 'httr2' is a modern re-imagining of 'httr' that uses a pipe-based interface and solves more of the problems that API wrapping packages face.", - "License": "MIT + file LICENSE", - "URL": "https://httr2.r-lib.org, https://github.com/r-lib/httr2", - "BugReports": "https://github.com/r-lib/httr2/issues", - "Depends": [ - "R (>= 4.1)" - ], - "Imports": [ - "cli (>= 3.0.0)", - "curl (>= 6.4.0)", - "glue", - "lifecycle", - "magrittr", - "openssl", - "R6", - "rappdirs", - "rlang (>= 1.1.0)", - "vctrs (>= 0.6.3)", - "withr" - ], - "Suggests": [ - "askpass", - "bench", - "clipr", - "covr", - "docopt", - "httpuv", - "jose", - "jsonlite", - "knitr", - "later (>= 1.4.0)", - "nanonext", - "otel (>= 0.2.0)", - "otelsdk (>= 0.2.0)", - "paws.common (>= 0.8.0)", - "promises", - "rmarkdown", - "testthat (>= 3.1.8)", - "tibble", - "webfakes (>= 1.4.0)", - "xml2" - ], - "VignetteBuilder": "knitr", - "Config/Needs/website": "tidyverse/tidytemplate", - "Config/testthat/edition": "3", - "Config/testthat/parallel": "true", - "Config/testthat/start-first": "resp-stream, req-perform", - "Encoding": "UTF-8", - "RoxygenNote": "7.3.3", - "NeedsCompilation": "no", - "Author": "Hadley Wickham [aut, cre], Posit Software, PBC [cph, fnd], Maximilian Girlich [ctb]", - "Maintainer": "Hadley Wickham ", - "Repository": "CRAN" - }, - "hunspell": { - "Package": "hunspell", - "Version": "3.0.6", - "Source": "Repository", - "Type": "Package", - "Title": "High-Performance Stemmer, Tokenizer, and Spell Checker", - "Depends": [ - "R (>= 3.0.2)" - ], - "Encoding": "UTF-8", - "Authors@R": "c( person(\"Jeroen\", \"Ooms\", ,\"jeroenooms@gmail.com\", role = c(\"aut\", \"cre\")), person(\"Authors of libhunspell\", role = \"cph\", comment = \"see AUTHORS file\"))", - "Description": "Low level spell checker and morphological analyzer based on the famous 'hunspell' library . The package can analyze or check individual words as well as parse text, latex, html or xml documents. For a more user-friendly interface use the 'spelling' package which builds on this package to automate checking of files, documentation and vignettes in all common formats.", - "License": "GPL-2 | LGPL-2.1 | MPL-1.1", - "URL": "https://docs.ropensci.org/hunspell/ https://ropensci.r-universe.dev/hunspell", - "BugReports": "https://github.com/ropensci/hunspell/issues", - "Imports": [ - "Rcpp", - "digest" - ], - "LinkingTo": [ - "Rcpp (>= 0.12.12)" - ], - "Suggests": [ - "spelling", - "testthat", - "knitr", - "rmarkdown" - ], - "VignetteBuilder": "knitr", - "RoxygenNote": "7.2.3", - "Language": "en-US", - "NeedsCompilation": "yes", - "Author": "Jeroen Ooms [aut, cre], Authors of libhunspell [cph] (see AUTHORS file)", - "Maintainer": "Jeroen Ooms ", - "Repository": "CRAN" - }, - "ids": { - "Package": "ids", - "Version": "1.0.1", - "Source": "Repository", - "Title": "Generate Random Identifiers", - "Authors@R": "person(\"Rich\", \"FitzJohn\", role = c(\"aut\", \"cre\"), email = \"rich.fitzjohn@gmail.com\")", - "Description": "Generate random or human readable and pronounceable identifiers.", - "License": "MIT + file LICENSE", - "URL": "https://github.com/richfitz/ids", - "BugReports": "https://github.com/richfitz/ids/issues", - "Imports": [ - "openssl", - "uuid" - ], - "Suggests": [ - "knitr", - "rcorpora", - "rmarkdown", - "testthat" - ], - "RoxygenNote": "6.0.1", - "VignetteBuilder": "knitr", - "NeedsCompilation": "no", - "Author": "Rich FitzJohn [aut, cre]", - "Maintainer": "Rich FitzJohn ", - "Repository": "CRAN" - }, - "igraph": { - "Package": "igraph", - "Version": "2.3.0", - "Source": "Repository", - "Title": "Network Analysis and Visualization", - "Authors@R": "c( person(\"Gábor\", \"Csárdi\", , \"csardi.gabor@gmail.com\", role = \"aut\", comment = c(ORCID = \"0000-0001-7098-9676\")), person(\"Tamás\", \"Nepusz\", , \"ntamas@gmail.com\", role = \"aut\", comment = c(ORCID = \"0000-0002-1451-338X\")), person(\"Vincent\", \"Traag\", role = \"aut\", comment = c(ORCID = \"0000-0003-3170-3879\")), person(\"Szabolcs\", \"Horvát\", , \"szhorvat@gmail.com\", role = \"aut\", comment = c(ORCID = \"0000-0002-3100-523X\")), person(\"Fabio\", \"Zanini\", , \"fabio.zanini@unsw.edu.au\", role = \"aut\", comment = c(ORCID = \"0000-0001-7097-8539\")), person(\"Daniel\", \"Noom\", role = \"aut\"), person(\"Kirill\", \"Müller\", , \"kirill@cynkra.com\", role = c(\"aut\", \"cre\"), comment = c(ORCID = \"0000-0002-1416-3412\")), person(\"Michael\", \"Antonov\", role = \"ctb\"), person(\"Chan Zuckerberg Initiative\", role = \"fnd\", comment = c(ROR = \"02qenvm24\")), person(\"David\", \"Schoch\", , \"david.schoch@cynkra.com\", role = \"aut\", comment = c(ORCID = \"0000-0003-2952-4812\")), person(\"Maëlle\", \"Salmon\", , \"maelle@cynkra.com\", role = \"aut\", comment = c(ORCID = \"0000-0002-2815-0399\")), person(\"R Consortium\", role = \"fnd\", comment = c(ROR = \"01z833950\")) )", - "Description": "Routines for simple graphs and network analysis. It can handle large graphs very well and provides functions for generating random and regular graphs, graph visualization, centrality methods and much more.", - "License": "GPL (>= 2)", - "URL": "https://r.igraph.org/, https://igraph.org/, https://igraph.discourse.group/", - "BugReports": "https://github.com/igraph/rigraph/issues", - "Depends": [ - "methods", - "R (>= 3.5.0)" - ], - "Imports": [ - "cli", - "graphics", - "grDevices", - "lifecycle", - "magrittr", - "Matrix", - "pkgconfig (>= 2.0.0)", - "rlang (>= 1.1.0)", - "stats", - "utils", - "vctrs" - ], - "Suggests": [ - "ape (>= 5.7-0.1)", - "callr", - "decor", - "digest", - "igraphdata", - "knitr", - "rgl (>= 1.3.14)", - "rmarkdown", - "scales", - "stats4", - "tcltk", - "testthat", - "vdiffr", - "withr" - ], - "Enhances": [ - "graph" - ], - "LinkingTo": [ - "cpp11 (>= 0.5.0)" - ], - "VignetteBuilder": "knitr", - "Config/build/compilation-database": "false", - "Config/build/never-clean": "true", - "Config/comment/compilation-database": "Generate manually with pkgload:::generate_db() for faster pkgload::load_all()", - "Config/Needs/build": "devtools, irlba, pkgconfig", - "Config/Needs/coverage": "covr", - "Config/Needs/roxygen2": "r-lib/roxygen2, igraph/igraph.r2cdocs, moodymudskipper/devtag", - "Config/Needs/website": "here, readr, tibble, xmlparsedata, xml2", - "Config/testthat/edition": "3", - "Config/testthat/parallel": "true", - "Config/testthat/start-first": "aaa-auto, vs-es, scan, vs-operators, weakref, watts.strogatz.game", - "Encoding": "UTF-8", - "RoxygenNote": "7.3.3.9000", - "SystemRequirements": "libxml2 (optional), glpk (>= 4.57, optional)", - "NeedsCompilation": "yes", - "Author": "Gábor Csárdi [aut] (ORCID: ), Tamás Nepusz [aut] (ORCID: ), Vincent Traag [aut] (ORCID: ), Szabolcs Horvát [aut] (ORCID: ), Fabio Zanini [aut] (ORCID: ), Daniel Noom [aut], Kirill Müller [aut, cre] (ORCID: ), Michael Antonov [ctb], Chan Zuckerberg Initiative [fnd] (ROR: ), David Schoch [aut] (ORCID: ), Maëlle Salmon [aut] (ORCID: ), R Consortium [fnd] (ROR: )", - "Maintainer": "Kirill Müller ", - "Repository": "CRAN" - }, - "ini": { - "Package": "ini", - "Version": "0.3.1", - "Source": "Repository", - "Type": "Package", - "Title": "Read and Write '.ini' Files", - "Date": "2018-05-19", - "Author": "David Valentim Dias", - "Maintainer": "David Valentim Dias ", - "Description": "Parse simple '.ini' configuration files to an structured list. Users can manipulate this resulting list with lapply() functions. This same structured list can be used to write back to file after modifications.", - "License": "GPL-3", - "URL": "https://github.com/dvdscripter/ini", - "BugReports": "https://github.com/dvdscripter/ini/issues", - "LazyData": "FALSE", - "RoxygenNote": "6.0.1", - "Suggests": [ - "testthat" - ], - "NeedsCompilation": "no", - "Repository": "CRAN" - }, - "insight": { - "Package": "insight", - "Version": "1.5.0", - "Source": "Repository", - "Type": "Package", - "Title": "Easy Access to Model Information for Various Model Objects", - "Authors@R": "c(person(given = \"Daniel\", family = \"Lüdecke\", role = c(\"aut\", \"cre\"), email = \"officialeasystats@gmail.com\", comment = c(ORCID = \"0000-0002-8895-3206\")), person(given = \"Dominique\", family = \"Makowski\", role = c(\"aut\", \"ctb\"), email = \"dom.makowski@gmail.com\", comment = c(ORCID = \"0000-0001-5375-9967\")), person(given = \"Indrajeet\", family = \"Patil\", role = c(\"aut\", \"ctb\"), email = \"patilindrajeet.science@gmail.com\", comment = c(ORCID = \"0000-0003-1995-6531\")), person(given = \"Philip\", family = \"Waggoner\", role = c(\"aut\", \"ctb\"), email = \"philip.waggoner@gmail.com\", comment = c(ORCID = \"0000-0002-7825-7573\")), person(given = \"Mattan S.\", family = \"Ben-Shachar\", role = c(\"aut\", \"ctb\"), email = \"matanshm@post.bgu.ac.il\", comment = c(ORCID = \"0000-0002-4287-4801\")), person(given = \"Brenton M.\", family = \"Wiernik\", role = c(\"aut\", \"ctb\"), email = \"brenton@wiernik.org\", comment = c(ORCID = \"0000-0001-9560-6336\")), person(given = \"Vincent\", family = \"Arel-Bundock\", email = \"vincent.arel-bundock@umontreal.ca\", role = c(\"aut\", \"ctb\"), comment = c(ORCID = \"0000-0003-2042-7063\")), person(given = \"Etienne\", family = \"Bacher\", email = \"etienne.bacher@protonmail.com\", role = c(\"aut\", \"ctb\"), comment = c(ORCID = \"0000-0002-9271-5075\")), person(given = \"Alex\", family = \"Hayes\", role = c(\"rev\"), email = \"alexpghayes@gmail.com\", comment = c(ORCID = \"0000-0002-4985-5160\")), person(given = \"Grant\", family = \"McDermott\", role = c(\"ctb\"), email = \"grantmcd@uoregon.edu\", comment = c(ORCID = \"0000-0001-7883-8573\")), person(given = \"Rémi\", family = \"Thériault\", role = \"ctb\", email = \"remi.theriault@mail.mcgill.ca\", comment = c(ORCID = \"0000-0003-4315-6788\")), person(given = \"Alex\", family = \"Reinhart\", role = \"ctb\", email = \"areinhar@stat.cmu.edu\", comment = c(ORCID = \"0000-0002-6658-514X\")))", - "Maintainer": "Daniel Lüdecke ", - "Description": "A tool to provide an easy, intuitive and consistent access to information contained in various R models, like model formulas, model terms, information about random effects, data that was used to fit the model or data from response variables. 'insight' mainly revolves around two types of functions: Functions that find (the names of) information, starting with 'find_', and functions that get the underlying data, starting with 'get_'. The package has a consistent syntax and works with many different model objects, where otherwise functions to access these information are missing.", - "License": "GPL-3", - "URL": "https://easystats.github.io/insight/", - "BugReports": "https://github.com/easystats/insight/issues", - "Depends": [ - "R (>= 3.6)" - ], - "Imports": [ - "methods", - "stats", - "utils" - ], - "Suggests": [ - "AER", - "afex", - "aod", - "ape", - "BayesFactor", - "bayestestR", - "bbmle", - "bdsmatrix", - "betareg", - "biglm", - "BH", - "blavaan (>= 0.5-5)", - "blme", - "boot", - "brms", - "broom", - "car", - "carData", - "censReg", - "cgam", - "clubSandwich", - "cobalt", - "coxme", - "cplm", - "crch", - "curl", - "datawizard (>= 1.2.0)", - "dbarts", - "effectsize", - "emmeans", - "epiR", - "estimatr", - "feisr", - "fixest (>= 0.11.2)", - "fungible", - "fwb", - "gam", - "gamlss", - "gamlss.data", - "gamm4", - "gbm", - "gee", - "geepack", - "geoR", - "GLMMadaptive", - "glmmTMB (>= 1.1.12)", - "glmtoolbox", - "gmnl", - "grDevices", - "gt", - "httptest2", - "httr2", - "interp", - "ivreg", - "JM", - "knitr", - "lavaan", - "lavaSearch2", - "lcmm", - "lfe", - "lme4", - "lmerTest", - "lmtest", - "logistf", - "logitr", - "marginaleffects (>= 0.29.0)", - "MASS", - "Matrix", - "mclogit", - "mclust", - "MCMCglmm", - "merTools", - "metaBMA", - "metadat", - "metafor", - "metaplus", - "mgcv", - "mhurdle", - "mice (>= 3.17.0)", - "mlogit", - "mmrm", - "modelbased (>= 0.9.0)", - "multgee", - "MuMIn", - "mvtnorm", - "nestedLogit", - "nlme", - "nnet", - "nonnest2", - "ordinal", - "panelr", - "parameters (>= 0.28.0)", - "parsnip", - "pbkrtest", - "performance", - "phylolm", - "plm", - "PROreg (>= 1.3.0)", - "pscl", - "psych", - "quantreg", - "Rcpp", - "RcppEigen", - "reformulas", - "recipes", - "rmarkdown", - "rms", - "robustbase", - "robustlmm", - "rpart", - "rstanarm (>= 2.21.1)", - "rstantools (>= 2.1.0)", - "rstpm2", - "rstudioapi", - "RWiener", - "sandwich", - "sdmTMB", - "sampleSelection", - "serp", - "speedglm", - "splines", - "statmod", - "survey", - "survival", - "svylme", - "testthat", - "tidymodels", - "tinytable (>= 0.13.0)", - "TMB", - "truncreg", - "tune", - "tweedie", - "VGAM", - "WeightIt", - "withr", - "workflows" - ], - "VignetteBuilder": "knitr", - "Encoding": "UTF-8", - "Language": "en-US", - "RoxygenNote": "7.3.3", - "Config/testthat/edition": "3", - "Config/testthat/parallel": "true", - "Config/Needs/website": "easystats/easystatstemplate", - "Config/Needs/check": "stan-dev/cmdstanr", - "NeedsCompilation": "no", - "Author": "Daniel Lüdecke [aut, cre] (ORCID: ), Dominique Makowski [aut, ctb] (ORCID: ), Indrajeet Patil [aut, ctb] (ORCID: ), Philip Waggoner [aut, ctb] (ORCID: ), Mattan S. Ben-Shachar [aut, ctb] (ORCID: ), Brenton M. Wiernik [aut, ctb] (ORCID: ), Vincent Arel-Bundock [aut, ctb] (ORCID: ), Etienne Bacher [aut, ctb] (ORCID: ), Alex Hayes [rev] (ORCID: ), Grant McDermott [ctb] (ORCID: ), Rémi Thériault [ctb] (ORCID: ), Alex Reinhart [ctb] (ORCID: )", - "Repository": "CRAN" - }, - "isoband": { - "Package": "isoband", - "Version": "0.3.0", - "Source": "Repository", - "Title": "Generate Isolines and Isobands from Regularly Spaced Elevation Grids", - "Authors@R": "c( person(\"Hadley\", \"Wickham\", , \"hadley@posit.co\", role = \"aut\", comment = c(ORCID = \"0000-0003-4757-117X\")), person(\"Claus O.\", \"Wilke\", , \"wilke@austin.utexas.edu\", role = \"aut\", comment = c(\"Original author\", ORCID = \"0000-0002-7470-9261\")), person(\"Thomas Lin\", \"Pedersen\", , \"thomas.pedersen@posit.co\", role = c(\"aut\", \"cre\"), comment = c(ORCID = \"0000-0002-5147-4711\")), person(\"Posit, PBC\", role = c(\"cph\", \"fnd\"), comment = c(ROR = \"03wc8by49\")) )", - "Description": "A fast C++ implementation to generate contour lines (isolines) and contour polygons (isobands) from regularly spaced grids containing elevation data.", - "License": "MIT + file LICENSE", - "URL": "https://isoband.r-lib.org, https://github.com/r-lib/isoband", - "BugReports": "https://github.com/r-lib/isoband/issues", - "Imports": [ - "cli", - "grid", - "rlang", - "utils" - ], - "Suggests": [ - "covr", - "ggplot2", - "knitr", - "magick", - "bench", - "rmarkdown", - "sf", - "testthat (>= 3.0.0)", - "xml2" - ], - "VignetteBuilder": "knitr", - "Config/Needs/website": "tidyverse/tidytemplate", - "Config/testthat/edition": "3", - "Config/usethis/last-upkeep": "2025-12-05", - "Encoding": "UTF-8", - "RoxygenNote": "7.3.3", - "Config/build/compilation-database": "true", - "LinkingTo": [ - "cpp11" - ], - "NeedsCompilation": "yes", - "Author": "Hadley Wickham [aut] (ORCID: ), Claus O. Wilke [aut] (Original author, ORCID: ), Thomas Lin Pedersen [aut, cre] (ORCID: ), Posit, PBC [cph, fnd] (ROR: )", - "Maintainer": "Thomas Lin Pedersen ", - "Repository": "CRAN" - }, - "iterators": { - "Package": "iterators", - "Version": "1.0.14", - "Source": "Repository", - "Type": "Package", - "Title": "Provides Iterator Construct", - "Authors@R": "c(person(\"Folashade\", \"Daniel\", role=\"cre\", email=\"fdaniel@microsoft.com\"), person(\"Revolution\", \"Analytics\", role=c(\"aut\", \"cph\")), person(\"Steve\", \"Weston\", role=\"aut\"))", - "Description": "Support for iterators, which allow a programmer to traverse through all the elements of a vector, list, or other collection of data.", - "URL": "https://github.com/RevolutionAnalytics/iterators", - "Depends": [ - "R (>= 2.5.0)", - "utils" - ], - "Suggests": [ - "RUnit", - "foreach" - ], - "License": "Apache License (== 2.0)", - "NeedsCompilation": "no", - "Author": "Folashade Daniel [cre], Revolution Analytics [aut, cph], Steve Weston [aut]", - "Maintainer": "Folashade Daniel ", - "Repository": "CRAN" - }, - "jose": { - "Package": "jose", - "Version": "2.0.0", - "Source": "Repository", - "Type": "Package", - "Title": "JavaScript Object Signing and Encryption", - "Authors@R": "person(\"Jeroen\", \"Ooms\", role = c(\"aut\", \"cre\"), email = \"jeroenooms@gmail.com\", comment = c(ORCID = \"0000-0002-4035-0289\"))", - "Description": "Read and write JSON Web Keys (JWK, rfc7517), generate and verify JSON Web Signatures (JWS, rfc7515) and encode/decode JSON Web Tokens (JWT, rfc7519) . These standards provide modern signing and encryption formats that are natively supported by browsers via the JavaScript WebCryptoAPI , and used by services like OAuth 2.0, LetsEncrypt, and Github Apps.", - "License": "MIT + file LICENSE", - "URL": "https://r-lib.r-universe.dev/jose", - "BugReports": "https://github.com/r-lib/jose/issues", - "Depends": [ - "openssl (>= 1.2.1)" - ], - "Imports": [ - "jsonlite" - ], - "RoxygenNote": "7.3.3.9000", - "VignetteBuilder": "knitr", - "Suggests": [ - "spelling", - "testthat", - "knitr", - "rmarkdown" - ], - "Encoding": "UTF-8", - "Language": "en-US", - "NeedsCompilation": "no", - "Author": "Jeroen Ooms [aut, cre] (ORCID: )", - "Maintainer": "Jeroen Ooms ", - "Repository": "CRAN" - }, - "jpeg": { - "Package": "jpeg", - "Version": "0.1-11", - "Source": "Repository", - "Title": "Read and write JPEG images", - "Author": "Simon Urbanek [aut, cre, cph] (https://urbanek.org, )", - "Authors@R": "person(\"Simon\", \"Urbanek\", role=c(\"aut\",\"cre\",\"cph\"), email=\"Simon.Urbanek@r-project.org\", comment=c(\"https://urbanek.org\", ORCID=\"0000-0003-2297-1732\"))", - "Maintainer": "Simon Urbanek ", - "Depends": [ - "R (>= 2.9.0)" - ], - "Description": "This package provides an easy and simple way to read, write and display bitmap images stored in the JPEG format. It can read and write both files and in-memory raw vectors.", - "License": "GPL-2 | GPL-3", - "SystemRequirements": "libjpeg", - "URL": "https://www.rforge.net/jpeg/", - "BugReports": "https://github.com/s-u/jpeg/issues", - "NeedsCompilation": "yes", - "Repository": "CRAN" - }, - "jquerylib": { - "Package": "jquerylib", - "Version": "0.1.4", - "Source": "Repository", - "Title": "Obtain 'jQuery' as an HTML Dependency Object", - "Authors@R": "c( person(\"Carson\", \"Sievert\", role = c(\"aut\", \"cre\"), email = \"carson@rstudio.com\", comment = c(ORCID = \"0000-0002-4958-2844\")), person(\"Joe\", \"Cheng\", role = \"aut\", email = \"joe@rstudio.com\"), person(family = \"RStudio\", role = \"cph\"), person(family = \"jQuery Foundation\", role = \"cph\", comment = \"jQuery library and jQuery UI library\"), person(family = \"jQuery contributors\", role = c(\"ctb\", \"cph\"), comment = \"jQuery library; authors listed in inst/lib/jquery-AUTHORS.txt\") )", - "Description": "Obtain any major version of 'jQuery' () and use it in any webpage generated by 'htmltools' (e.g. 'shiny', 'htmlwidgets', and 'rmarkdown'). Most R users don't need to use this package directly, but other R packages (e.g. 'shiny', 'rmarkdown', etc.) depend on this package to avoid bundling redundant copies of 'jQuery'.", - "License": "MIT + file LICENSE", - "Encoding": "UTF-8", - "Config/testthat/edition": "3", - "RoxygenNote": "7.0.2", - "Imports": [ - "htmltools" - ], - "Suggests": [ - "testthat" - ], - "NeedsCompilation": "no", - "Author": "Carson Sievert [aut, cre] (), Joe Cheng [aut], RStudio [cph], jQuery Foundation [cph] (jQuery library and jQuery UI library), jQuery contributors [ctb, cph] (jQuery library; authors listed in inst/lib/jquery-AUTHORS.txt)", - "Maintainer": "Carson Sievert ", - "Repository": "CRAN" - }, - "jsonlite": { - "Package": "jsonlite", - "Version": "2.0.0", - "Source": "Repository", - "Title": "A Simple and Robust JSON Parser and Generator for R", - "License": "MIT + file LICENSE", - "Depends": [ - "methods" - ], - "Authors@R": "c( person(\"Jeroen\", \"Ooms\", role = c(\"aut\", \"cre\"), email = \"jeroenooms@gmail.com\", comment = c(ORCID = \"0000-0002-4035-0289\")), person(\"Duncan\", \"Temple Lang\", role = \"ctb\"), person(\"Lloyd\", \"Hilaiel\", role = \"cph\", comment=\"author of bundled libyajl\"))", - "URL": "https://jeroen.r-universe.dev/jsonlite https://arxiv.org/abs/1403.2805", - "BugReports": "https://github.com/jeroen/jsonlite/issues", - "Maintainer": "Jeroen Ooms ", - "VignetteBuilder": "knitr, R.rsp", - "Description": "A reasonably fast JSON parser and generator, optimized for statistical data and the web. Offers simple, flexible tools for working with JSON in R, and is particularly powerful for building pipelines and interacting with a web API. The implementation is based on the mapping described in the vignette (Ooms, 2014). In addition to converting JSON data from/to R objects, 'jsonlite' contains functions to stream, validate, and prettify JSON data. The unit tests included with the package verify that all edge cases are encoded and decoded consistently for use with dynamic data in systems and applications.", - "Suggests": [ - "httr", - "vctrs", - "testthat", - "knitr", - "rmarkdown", - "R.rsp", - "sf" - ], - "RoxygenNote": "7.3.2", - "Encoding": "UTF-8", - "NeedsCompilation": "yes", - "Author": "Jeroen Ooms [aut, cre] (), Duncan Temple Lang [ctb], Lloyd Hilaiel [cph] (author of bundled libyajl)", - "Repository": "CRAN" - }, - "juicyjuice": { - "Package": "juicyjuice", - "Version": "0.1.0", - "Source": "Repository", - "Title": "Inline CSS Properties into HTML Tags Using 'juice'", - "Authors@R": "c( person(\"Richard\", \"Iannone\", , \"riannone@me.com\", c(\"aut\", \"cre\", \"cph\"), comment = c(ORCID = \"0000-0003-3925-190X\")), person(\"Automattic\", role = c(\"cph\"), comment = \"juice library\"), person(\"juice contributors\", role = c(\"ctb\"), comment = \"juice library\") )", - "Description": "There are occasions where you need a piece of HTML with integrated styles. A prime example of this is HTML email. This transformation involves moving the CSS and associated formatting instructions from the style block in the head of your document into the body of the HTML. Many prominent email clients require integrated styles in HTML email; otherwise a received HTML email will be displayed without any styling. This package will quickly and precisely perform these CSS transformations when given HTML text and it does so by using the JavaScript 'juice' library.", - "License": "MIT + file LICENSE", - "URL": "https://github.com/rich-iannone/juicyjuice", - "BugReports": "https://github.com/rich-iannone/juicyjuice/issues", - "Encoding": "UTF-8", - "RoxygenNote": "7.2.1", - "Imports": [ - "V8 (>= 4.2.0)" - ], - "Suggests": [ - "testthat (>= 3.0.0)" - ], - "Config/testthat/edition": "3", - "NeedsCompilation": "no", - "Author": "Richard Iannone [aut, cre, cph] (), Automattic [cph] (juice library), juice contributors [ctb] (juice library)", - "Maintainer": "Richard Iannone ", - "Repository": "CRAN" - }, - "kableExtra": { - "Package": "kableExtra", - "Version": "1.4.0", - "Source": "Repository", - "Type": "Package", - "Title": "Construct Complex Table with 'kable' and Pipe Syntax", - "Authors@R": "c( person('Hao', 'Zhu', email = 'haozhu233@gmail.com', role = c('aut', 'cre'), comment = c(ORCID = '0000-0002-3386-6076')), person('Thomas', 'Travison', role = 'ctb'), person('Timothy', 'Tsai', role = 'ctb'), person('Will', 'Beasley', email = 'wibeasley@hotmail.com', role = 'ctb'), person('Yihui', 'Xie', email = 'xie@yihui.name', role = 'ctb'), person('GuangChuang', 'Yu', email = 'guangchuangyu@gmail.com', role = 'ctb'), person('Stéphane', 'Laurent', role = 'ctb'), person('Rob', 'Shepherd', role = 'ctb'), person('Yoni', 'Sidi', role = 'ctb'), person('Brian', 'Salzer', role = 'ctb'), person('George', 'Gui', role = 'ctb'), person('Yeliang', 'Fan', role = 'ctb'), person('Duncan', 'Murdoch', role = 'ctb'), person('Vincent', 'Arel-Bundock', role = 'ctb'), person('Bill', 'Evans', role = 'ctb') )", - "Description": "Build complex HTML or 'LaTeX' tables using 'kable()' from 'knitr' and the piping syntax from 'magrittr'. Function 'kable()' is a light weight table generator coming from 'knitr'. This package simplifies the way to manipulate the HTML or 'LaTeX' codes generated by 'kable()' and allows users to construct complex tables and customize styles using a readable syntax.", - "License": "MIT + file LICENSE", - "URL": "http://haozhu233.github.io/kableExtra/, https://github.com/haozhu233/kableExtra", - "BugReports": "https://github.com/haozhu233/kableExtra/issues", - "Depends": [ - "R (>= 3.1.0)" - ], - "Imports": [ - "knitr (>= 1.33)", - "magrittr", - "stringr (>= 1.0)", - "xml2 (>= 1.1.1)", - "rmarkdown (>= 1.6.0)", - "scales", - "viridisLite", - "stats", - "grDevices", - "htmltools", - "rstudioapi", - "tools", - "digest", - "graphics", - "svglite" - ], - "Suggests": [ - "testthat", - "magick", - "tinytex", - "formattable", - "sparkline", - "webshot2" - ], - "Config/testthat/edition": "3", - "VignetteBuilder": "knitr", - "Encoding": "UTF-8", - "RoxygenNote": "7.2.3", - "Language": "en-US", - "NeedsCompilation": "no", - "Author": "Hao Zhu [aut, cre] (), Thomas Travison [ctb], Timothy Tsai [ctb], Will Beasley [ctb], Yihui Xie [ctb], GuangChuang Yu [ctb], Stéphane Laurent [ctb], Rob Shepherd [ctb], Yoni Sidi [ctb], Brian Salzer [ctb], George Gui [ctb], Yeliang Fan [ctb], Duncan Murdoch [ctb], Vincent Arel-Bundock [ctb], Bill Evans [ctb]", - "Maintainer": "Hao Zhu ", - "Repository": "CRAN" - }, - "knitr": { - "Package": "knitr", - "Version": "1.51", - "Source": "Repository", - "Type": "Package", - "Title": "A General-Purpose Package for Dynamic Report Generation in R", - "Authors@R": "c( person(\"Yihui\", \"Xie\", role = c(\"aut\", \"cre\"), email = \"xie@yihui.name\", comment = c(ORCID = \"0000-0003-0645-5666\", URL = \"https://yihui.org\")), person(\"Abhraneel\", \"Sarma\", role = \"ctb\"), person(\"Adam\", \"Vogt\", role = \"ctb\"), person(\"Alastair\", \"Andrew\", role = \"ctb\"), person(\"Alex\", \"Zvoleff\", role = \"ctb\"), person(\"Amar\", \"Al-Zubaidi\", role = \"ctb\"), person(\"Andre\", \"Simon\", role = \"ctb\", comment = \"the CSS files 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person(\"Jeff\", \"Arnold\", role = \"ctb\"), person(\"Jenny\", \"Bryan\", role = \"ctb\"), person(\"Jeremy\", \"Ashkenas\", role = c(\"ctb\", \"cph\"), comment = \"the CSS file at inst/misc/docco-classic.css\"), person(\"Jeremy\", \"Stephens\", role = \"ctb\"), person(\"Jim\", \"Hester\", role = \"ctb\"), person(\"Joe\", \"Cheng\", role = \"ctb\"), person(\"Johannes\", \"Ranke\", role = \"ctb\"), person(\"John\", \"Honaker\", role = \"ctb\"), person(\"John\", \"Muschelli\", role = \"ctb\"), person(\"Jonathan\", \"Keane\", role = \"ctb\"), person(\"JJ\", \"Allaire\", role = \"ctb\"), person(\"Johan\", \"Toloe\", role = \"ctb\"), person(\"Jonathan\", \"Sidi\", role = \"ctb\"), person(\"Joseph\", \"Larmarange\", role = \"ctb\"), person(\"Julien\", \"Barnier\", role = \"ctb\"), person(\"Kaiyin\", \"Zhong\", role = \"ctb\"), person(\"Kamil\", \"Slowikowski\", role = \"ctb\"), person(\"Karl\", \"Forner\", role = \"ctb\"), person(c(\"Kevin\", \"K.\"), \"Smith\", role = \"ctb\"), person(\"Kirill\", \"Mueller\", role = \"ctb\"), person(\"Kohske\", \"Takahashi\", role = \"ctb\"), person(\"Lorenz\", \"Walthert\", role = \"ctb\"), person(\"Lucas\", \"Gallindo\", role = \"ctb\"), person(\"Marius\", \"Hofert\", role = \"ctb\"), person(\"Martin\", \"Modrák\", role = \"ctb\"), person(\"Michael\", \"Chirico\", role = \"ctb\"), person(\"Michael\", \"Friendly\", role = \"ctb\"), person(\"Michal\", \"Bojanowski\", role = \"ctb\"), person(\"Michel\", \"Kuhlmann\", role = \"ctb\"), person(\"Miller\", \"Patrick\", role = \"ctb\"), person(\"Nacho\", \"Caballero\", role = \"ctb\"), person(\"Nick\", \"Salkowski\", role = \"ctb\"), person(\"Niels Richard\", \"Hansen\", role = \"ctb\"), person(\"Noam\", \"Ross\", role = \"ctb\"), person(\"Obada\", \"Mahdi\", role = \"ctb\"), person(\"Pavel N.\", \"Krivitsky\", role = \"ctb\", comment=c(ORCID = \"0000-0002-9101-3362\")), person(\"Pedro\", \"Faria\", role = \"ctb\"), person(\"Qiang\", \"Li\", role = \"ctb\"), person(\"Ramnath\", \"Vaidyanathan\", role = \"ctb\"), person(\"Richard\", \"Cotton\", role = \"ctb\"), person(\"Robert\", \"Krzyzanowski\", role = \"ctb\"), person(\"Rodrigo\", \"Copetti\", role = \"ctb\"), person(\"Romain\", \"Francois\", role = \"ctb\"), person(\"Ruaridh\", \"Williamson\", role = \"ctb\"), person(\"Sagiru\", \"Mati\", role = \"ctb\", comment = c(ORCID = \"0000-0003-1413-3974\")), person(\"Scott\", \"Kostyshak\", role = \"ctb\"), person(\"Sebastian\", \"Meyer\", role = \"ctb\"), person(\"Sietse\", \"Brouwer\", role = \"ctb\"), person(c(\"Simon\", \"de\"), \"Bernard\", role = \"ctb\"), person(\"Sylvain\", \"Rousseau\", role = \"ctb\"), person(\"Taiyun\", \"Wei\", role = \"ctb\"), person(\"Thibaut\", \"Assus\", role = \"ctb\"), person(\"Thibaut\", \"Lamadon\", role = \"ctb\"), person(\"Thomas\", \"Leeper\", role = \"ctb\"), person(\"Tim\", \"Mastny\", role = \"ctb\"), person(\"Tom\", \"Torsney-Weir\", role = \"ctb\"), person(\"Trevor\", \"Davis\", role = \"ctb\"), person(\"Viktoras\", \"Veitas\", role = \"ctb\"), person(\"Weicheng\", \"Zhu\", role = \"ctb\"), person(\"Wush\", \"Wu\", role = \"ctb\"), person(\"Zachary\", \"Foster\", role = \"ctb\"), person(\"Zhian N.\", \"Kamvar\", role = \"ctb\", comment = c(ORCID = \"0000-0003-1458-7108\")), person(given = \"Posit Software, PBC\", role = c(\"cph\", \"fnd\")) )", - "Description": "Provides a general-purpose tool for dynamic report generation in R using Literate Programming techniques.", - "Depends": [ - "R (>= 3.6.0)" - ], - "Imports": [ - "evaluate (>= 0.15)", - "highr (>= 0.11)", - "methods", - "tools", - "xfun (>= 0.52)", - "yaml (>= 2.1.19)" - ], - "Suggests": [ - "bslib", - "DBI (>= 0.4-1)", - "digest", - "formatR", - "gifski", - "gridSVG", - "htmlwidgets (>= 0.7)", - "jpeg", - "JuliaCall (>= 0.11.1)", - "magick", - "litedown", - "markdown (>= 1.3)", - "otel", - "otelsdk", - "png", - "ragg", - "reticulate (>= 1.4)", - "rgl (>= 0.95.1201)", - "rlang", - "rmarkdown", - "sass", - "showtext", - "styler (>= 1.2.0)", - "targets (>= 0.6.0)", - "testit", - "tibble", - "tikzDevice (>= 0.10)", - "tinytex (>= 0.56)", - "webshot", - "rstudioapi", - "svglite" - ], - "License": "GPL", - "URL": "https://yihui.org/knitr/", - "BugReports": "https://github.com/yihui/knitr/issues", - "Encoding": "UTF-8", - "VignetteBuilder": "litedown, knitr", - "SystemRequirements": "Package vignettes based on R Markdown v2 or reStructuredText require Pandoc (http://pandoc.org). The function rst2pdf() requires rst2pdf (https://github.com/rst2pdf/rst2pdf).", - "Collate": "'block.R' 'cache.R' 'citation.R' 'hooks-html.R' 'plot.R' 'utils.R' 'defaults.R' 'concordance.R' 'engine.R' 'highlight.R' 'themes.R' 'header.R' 'hooks-asciidoc.R' 'hooks-chunk.R' 'hooks-extra.R' 'hooks-latex.R' 'hooks-md.R' 'hooks-rst.R' 'hooks-textile.R' 'hooks.R' 'otel.R' 'output.R' 'package.R' 'pandoc.R' 'params.R' 'parser.R' 'pattern.R' 'rocco.R' 'spin.R' 'table.R' 'template.R' 'utils-conversion.R' 'utils-rd2html.R' 'utils-string.R' 'utils-sweave.R' 'utils-upload.R' 'utils-vignettes.R' 'zzz.R'", - "RoxygenNote": "7.3.3", - "NeedsCompilation": "no", - "Author": "Yihui Xie [aut, cre] (ORCID: , URL: https://yihui.org), Abhraneel Sarma [ctb], Adam Vogt [ctb], Alastair Andrew [ctb], Alex Zvoleff [ctb], Amar Al-Zubaidi [ctb], Andre Simon [ctb] (the CSS files under inst/themes/ were derived from the Highlight package http://www.andre-simon.de), Aron Atkins [ctb], Aaron Wolen [ctb], Ashley Manton [ctb], Atsushi Yasumoto [ctb] (ORCID: ), Ben Baumer [ctb], Brian Diggs [ctb], Brian Zhang [ctb], Bulat Yapparov [ctb], Cassio Pereira [ctb], Christophe Dervieux [ctb], David Hall [ctb], David Hugh-Jones [ctb], David Robinson [ctb], Doug Hemken [ctb], Duncan Murdoch [ctb], Elio Campitelli [ctb], Ellis Hughes [ctb], Emily Riederer [ctb], Fabian Hirschmann [ctb], Fitch Simeon [ctb], Forest Fang [ctb], Frank E Harrell Jr [ctb] (the Sweavel package at inst/misc/Sweavel.sty), Garrick Aden-Buie [ctb], Gregoire Detrez [ctb], Hadley Wickham [ctb], Hao Zhu [ctb], Heewon Jeon [ctb], Henrik Bengtsson [ctb], Hiroaki Yutani [ctb], Ian Lyttle [ctb], Hodges Daniel [ctb], Jacob Bien [ctb], Jake Burkhead [ctb], James Manton [ctb], Jared Lander [ctb], Jason Punyon [ctb], Javier Luraschi [ctb], Jeff Arnold [ctb], Jenny Bryan [ctb], Jeremy Ashkenas [ctb, cph] (the CSS file at inst/misc/docco-classic.css), Jeremy Stephens [ctb], Jim Hester [ctb], Joe Cheng [ctb], Johannes Ranke [ctb], John Honaker [ctb], John Muschelli [ctb], Jonathan Keane [ctb], JJ Allaire [ctb], Johan Toloe [ctb], Jonathan Sidi [ctb], Joseph Larmarange [ctb], Julien Barnier [ctb], Kaiyin Zhong [ctb], Kamil Slowikowski [ctb], Karl Forner [ctb], Kevin K. Smith [ctb], Kirill Mueller [ctb], Kohske Takahashi [ctb], Lorenz Walthert [ctb], Lucas Gallindo [ctb], Marius Hofert [ctb], Martin Modrák [ctb], Michael Chirico [ctb], Michael Friendly [ctb], Michal Bojanowski [ctb], Michel Kuhlmann [ctb], Miller Patrick [ctb], Nacho Caballero [ctb], Nick Salkowski [ctb], Niels Richard Hansen [ctb], Noam Ross [ctb], Obada Mahdi [ctb], Pavel N. Krivitsky [ctb] (ORCID: ), Pedro Faria [ctb], Qiang Li [ctb], Ramnath Vaidyanathan [ctb], Richard Cotton [ctb], Robert Krzyzanowski [ctb], Rodrigo Copetti [ctb], Romain Francois [ctb], Ruaridh Williamson [ctb], Sagiru Mati [ctb] (ORCID: ), Scott Kostyshak [ctb], Sebastian Meyer [ctb], Sietse Brouwer [ctb], Simon de Bernard [ctb], Sylvain Rousseau [ctb], Taiyun Wei [ctb], Thibaut Assus [ctb], Thibaut Lamadon [ctb], Thomas Leeper [ctb], Tim Mastny [ctb], Tom Torsney-Weir [ctb], Trevor Davis [ctb], Viktoras Veitas [ctb], Weicheng Zhu [ctb], Wush Wu [ctb], Zachary Foster [ctb], Zhian N. Kamvar [ctb] (ORCID: ), Posit Software, PBC [cph, fnd]", - "Maintainer": "Yihui Xie ", - "Repository": "CRAN" - }, - "labeling": { - "Package": "labeling", - "Version": "0.4.3", - "Source": "Repository", - "Type": "Package", - "Title": "Axis Labeling", - "Date": "2023-08-29", - "Author": "Justin Talbot,", - "Maintainer": "Nuno Sempere ", - "Description": "Functions which provide a range of axis labeling algorithms.", - "License": "MIT + file LICENSE | Unlimited", - "Collate": "'labeling.R'", - "NeedsCompilation": "no", - "Imports": [ - "stats", - "graphics" - ], - "Repository": "CRAN" - }, - "labelled": { - "Package": "labelled", - "Version": "2.16.0", - "Source": "Repository", - "Type": "Package", - "Title": "Manipulating Labelled Data", - "Maintainer": "Joseph Larmarange ", - "Authors@R": "c( person(\"Joseph\", \"Larmarange\", email = \"joseph@larmarange.net\", role = c(\"aut\", \"cre\"), comment = c(ORCID = \"0000-0001-7097-700X\")), person(\"Daniel\", \"Ludecke\", role = \"ctb\"), person(\"Hadley\", \"Wickham\", role = \"ctb\"), person(\"Michal\", \"Bojanowski\", role = \"ctb\"), person(\"François\", \"Briatte\", role = \"ctb\") )", - "Description": "Work with labelled data imported from 'SPSS' or 'Stata' with 'haven' or 'foreign'. This package provides useful functions to deal with \"haven_labelled\" and \"haven_labelled_spss\" classes introduced by 'haven' package.", - "License": "GPL (>= 3)", - "Encoding": "UTF-8", - "Depends": [ - "R (>= 3.2)" - ], - "Imports": [ - "haven (>= 2.4.1)", - "cli", - "dplyr (>= 1.1.0)", - "lifecycle", - "rlang (>= 1.1.0)", - "vctrs", - "stringr", - "tidyr (>= 1.3.0)", - "tidyselect" - ], - "Suggests": [ - "gt", - "knitr", - "rmarkdown", - "purrr", - "questionr", - "snakecase", - "spelling", - "survey", - "testthat (>= 3.2.0)" - ], - "Enhances": [ - "memisc" - ], - "URL": "https://larmarange.github.io/labelled/, https://github.com/larmarange/labelled", - "BugReports": "https://github.com/larmarange/labelled/issues", - "VignetteBuilder": "knitr", - "LazyData": "true", - "RoxygenNote": "7.3.3", - "Language": "en-US", - "Config/testthat/edition": "3", - "Config/Needs/check": "memisc", - "NeedsCompilation": "no", - "Author": "Joseph Larmarange [aut, cre] (ORCID: ), Daniel Ludecke [ctb], Hadley Wickham [ctb], Michal Bojanowski [ctb], François Briatte [ctb]", - "Repository": "CRAN" - }, - "later": { - "Package": "later", - "Version": "1.4.8", - "Source": "Repository", - "Type": "Package", - "Title": "Utilities for Scheduling Functions to Execute Later with Event Loops", - "Authors@R": "c( person(\"Winston\", \"Chang\", , \"winston@posit.co\", role = \"aut\", comment = c(ORCID = \"0000-0002-1576-2126\")), person(\"Joe\", \"Cheng\", , \"joe@posit.co\", role = \"aut\"), person(\"Charlie\", \"Gao\", , \"charlie.gao@posit.co\", role = c(\"aut\", \"cre\"), comment = c(ORCID = \"0000-0002-0750-061X\")), person(\"Posit Software, PBC\", role = c(\"cph\", \"fnd\"), comment = c(ROR = \"03wc8by49\")), person(\"Marcus\", \"Geelnard\", role = c(\"ctb\", \"cph\"), comment = \"TinyCThread library, https://tinycthread.github.io/\"), person(\"Evan\", \"Nemerson\", role = c(\"ctb\", \"cph\"), comment = \"TinyCThread library, https://tinycthread.github.io/\") )", - "Description": "Executes arbitrary R or C functions some time after the current time, after the R execution stack has emptied. The functions are scheduled in an event loop.", - "License": "MIT + file LICENSE", - "URL": "https://later.r-lib.org, https://github.com/r-lib/later", - "BugReports": "https://github.com/r-lib/later/issues", - "Depends": [ - "R (>= 3.5)" - ], - "Imports": [ - "Rcpp (>= 1.0.10)", - "rlang" - ], - "Suggests": [ - "knitr", - "nanonext", - "promises", - "rmarkdown", - "testthat (>= 3.0.0)" - ], - "LinkingTo": [ - "Rcpp" - ], - "VignetteBuilder": "knitr", - "Config/build/compilation-database": "true", - "Config/Needs/website": "tidyverse/tidytemplate", - "Config/testthat/edition": "3", - "Config/usethis/last-upkeep": "2025-07-18", - "Encoding": "UTF-8", - "RoxygenNote": "7.3.3", - "NeedsCompilation": "yes", - "Author": "Winston Chang [aut] (ORCID: ), Joe Cheng [aut], Charlie Gao [aut, cre] (ORCID: ), Posit Software, PBC [cph, fnd] (ROR: ), Marcus Geelnard [ctb, cph] (TinyCThread library, https://tinycthread.github.io/), Evan Nemerson [ctb, cph] (TinyCThread library, https://tinycthread.github.io/)", - "Maintainer": "Charlie Gao ", - "Repository": "CRAN" - }, - "latex2exp": { - "Package": "latex2exp", - "Version": "0.9.8", - "Source": "Repository", - "Type": "Package", - "Title": "Use LaTeX Expressions in Plots", - "Date": "2024-07-05", - "Authors@R": "person(\"Stefano\", \"Meschiari\", email=\"stefano.meschiari@gmail.com\", role=c(\"aut\", \"cre\"))", - "Description": "Parses and converts LaTeX math formulas to R's plotmath expressions, used to enter mathematical formulas and symbols to be rendered as text, axis labels, etc. throughout R's plotting system.", - "License": "MIT + file LICENSE", - "URL": "https://www.stefanom.io/latex2exp/, https://github.com/stefano-meschiari/latex2exp", - "BugReports": "https://github.com/stefano-meschiari/latex2exp/issues", - "Encoding": "UTF-8", - "Suggests": [ - "tools", - "testthat", - "waldo", - "knitr", - "ggplot2", - "rmarkdown", - "purrr", - "tibble", - "reactable", - "htmltools", - "RCurl", - "rlang", - "dplyr" - ], - "VignetteBuilder": "knitr", - "RoxygenNote": "7.2.3", - "Language": "en-US", - "NeedsCompilation": "no", - "Author": "Stefano Meschiari [aut, cre]", - "Maintainer": "Stefano Meschiari ", - "Repository": "CRAN" - }, - "lattice": { - "Package": "lattice", - "Version": "0.22-9", - "Source": "Repository", - "Date": "2026-02-03", - "Priority": "recommended", - "Title": "Trellis Graphics for R", - "Authors@R": "c(person(\"Deepayan\", \"Sarkar\", role = c(\"aut\", \"cre\"), email = \"deepayan.sarkar@r-project.org\", comment = c(ORCID = \"0000-0003-4107-1553\")), person(\"Felix\", \"Andrews\", role = \"ctb\"), person(\"Kevin\", \"Wright\", role = \"ctb\", comment = \"documentation\"), person(\"Neil\", \"Klepeis\", role = \"ctb\"), person(\"Johan\", \"Larsson\", role = \"ctb\", comment = \"miscellaneous improvements\"), person(\"Zhijian (Jason)\", \"Wen\", role = \"cph\", comment = \"filled contour code\"), person(\"Paul\", \"Murrell\", role = \"ctb\", email = \"paul@stat.auckland.ac.nz\"), person(\"Stefan\", \"Eng\", role = \"ctb\", comment = \"violin plot improvements\"), person(\"Achim\", \"Zeileis\", role = \"ctb\", comment = \"modern colors\"), person(\"Alexandre\", \"Courtiol\", role = \"ctb\", comment = \"generics for larrows, lpolygon, lrect and lsegments\") )", - "Description": "A powerful and elegant high-level data visualization system inspired by Trellis graphics, with an emphasis on multivariate data. 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Also capable of exporting/converting (the resulting) complex 'pandoc' documents to e.g. HTML, 'PDF', 'docx' or 'odt'. 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Ben-Shachar [aut] (ORCID: ), Indrajeet Patil [aut] (ORCID: ), Søren Højsgaard [aut], Brenton M. Wiernik [aut] (ORCID: ), Zen J. Lau [ctb], Vincent Arel-Bundock [ctb] (ORCID: ), Jeffrey Girard [ctb] (ORCID: ), Christina Maimone [rev], Niels Ohlsen [rev], Douglas Ezra Morrison [ctb] (ORCID: ), Joseph Luchman [ctb] (ORCID: )", - "Repository": "CRAN" - }, - "pbkrtest": { - "Package": "pbkrtest", - "Version": "0.5.5", - "Source": "Repository", - "Title": "Parametric Bootstrap, Kenward-Roger and Satterthwaite Based Methods for Test in Mixed Models", - "Authors@R": "c( person(given = \"Ulrich\", family = \"Halekoh\", email = \"uhalekoh@health.sdu.dk\", role = c(\"aut\", \"cph\")), person(given = \"Søren\", family = \"Højsgaard\", email = \"sorenh@math.aau.dk\", role = c(\"aut\", \"cre\", \"cph\")) )", - "Maintainer": "Søren Højsgaard ", - "Description": "Computes p-values based on (a) Satterthwaite or Kenward-Rogers degree of freedom methods and (b) parametric bootstrap for mixed effects models as implemented in the 'lme4' package. Implements parametric bootstrap test for generalized linear mixed models as implemented in 'lme4' and generalized linear models. The package is documented in the paper by Halekoh and Højsgaard, (2012, ). 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These include e.g. measures like r-squared, intraclass correlation coefficient (Nakagawa, Johnson & Schielzeth (2017) ), root mean squared error or functions to check models for overdispersion, singularity or zero-inflation and more. Functions apply to a large variety of regression models, including generalized linear models, mixed effects models and Bayesian models. References: Lüdecke et al. 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It is similar to 'utils::sessionInfo()', but includes more information about packages, and where they were installed from.", - "License": "GPL-2", - "URL": "https://github.com/r-lib/sessioninfo#readme, https://sessioninfo.r-lib.org", - "BugReports": "https://github.com/r-lib/sessioninfo/issues", - "Depends": [ - "R (>= 3.4)" - ], - "Imports": [ - "cli (>= 3.1.0)", - "tools", - "utils" - ], - "Suggests": [ - "callr", - "covr", - "gh", - "reticulate", - "rmarkdown", - "testthat (>= 3.2.0)", - "withr" - ], - "Config/Needs/website": "pkgdown, tidyverse/tidytemplate", - "Config/testthat/edition": "3", - "Config/testthat/parallel": "true", - "Encoding": "UTF-8", - "RoxygenNote": "7.3.2", - "NeedsCompilation": "no", - "Author": "Gábor Csárdi [cre], Hadley Wickham [aut], Winston Chang [aut], Robert Flight [aut], Kirill Müller [aut], Jim Hester [aut], R Core team [ctb], Posit Software, PBC [cph, fnd]", - "Repository": "CRAN" - }, - "shape": { - "Package": "shape", - "Version": "1.4.6.1", - "Source": "Repository", - "Title": "Functions for Plotting Graphical Shapes, Colors", - "Author": "Karline Soetaert ", - "Maintainer": "Karline Soetaert ", - "Depends": [ - "R (>= 2.01)" - ], - "Imports": [ - "stats", - "graphics", - "grDevices" - ], - "Description": "Functions for plotting graphical shapes such as ellipses, circles, cylinders, arrows, ...", - "License": "GPL (>= 3)", - "NeedsCompilation": "no", - "Repository": "CRAN" - }, - "shiny": { - "Package": "shiny", - "Version": "1.13.0", - "Source": "Repository", - "Type": "Package", - "Title": "Web Application Framework for R", - "Authors@R": "c( person(\"Winston\", \"Chang\", , \"winston@posit.co\", role = \"aut\", comment = c(ORCID = \"0000-0002-1576-2126\")), person(\"Joe\", \"Cheng\", , \"joe@posit.co\", role = \"aut\"), person(\"JJ\", \"Allaire\", , \"jj@posit.co\", role = \"aut\"), person(\"Carson\", \"Sievert\", , \"carson@posit.co\", role = c(\"aut\", \"cre\"), comment = c(ORCID = \"0000-0002-4958-2844\")), person(\"Barret\", \"Schloerke\", , \"barret@posit.co\", role = \"aut\", comment = c(ORCID = \"0000-0001-9986-114X\")), person(\"Garrick\", \"Aden-Buie\", , \"garrick@adenbuie.com\", role = \"aut\", comment = c(ORCID = \"0000-0002-7111-0077\")), person(\"Yihui\", \"Xie\", , \"yihui@posit.co\", role = \"aut\"), person(\"Jeff\", \"Allen\", role = \"aut\"), person(\"Jonathan\", \"McPherson\", , \"jonathan@posit.co\", role = \"aut\"), person(\"Alan\", \"Dipert\", role = \"aut\"), person(\"Barbara\", \"Borges\", role = \"aut\"), person(\"Posit Software, PBC\", role = c(\"cph\", \"fnd\"), comment = c(ROR = \"03wc8by49\")), person(, \"jQuery Foundation\", role = \"cph\", comment = \"jQuery library and jQuery UI library\"), person(, \"jQuery contributors\", role = c(\"ctb\", \"cph\"), comment = \"jQuery library; authors listed in inst/www/shared/jquery-AUTHORS.txt\"), person(, \"jQuery UI contributors\", role = c(\"ctb\", \"cph\"), comment = \"jQuery UI library; authors listed in inst/www/shared/jqueryui/AUTHORS.txt\"), person(\"Mark\", \"Otto\", role = \"ctb\", comment = \"Bootstrap library\"), person(\"Jacob\", \"Thornton\", role = \"ctb\", comment = \"Bootstrap library\"), person(, \"Bootstrap contributors\", role = \"ctb\", comment = \"Bootstrap library\"), person(, \"Twitter, Inc\", role = \"cph\", comment = \"Bootstrap library\"), person(\"Prem Nawaz\", \"Khan\", role = \"ctb\", comment = \"Bootstrap accessibility plugin\"), person(\"Victor\", \"Tsaran\", role = \"ctb\", comment = \"Bootstrap accessibility plugin\"), person(\"Dennis\", \"Lembree\", role = \"ctb\", comment = \"Bootstrap accessibility plugin\"), person(\"Srinivasu\", \"Chakravarthula\", role = \"ctb\", comment = \"Bootstrap accessibility plugin\"), person(\"Cathy\", \"O'Connor\", role = \"ctb\", comment = \"Bootstrap accessibility plugin\"), person(, \"PayPal, Inc\", role = \"cph\", comment = \"Bootstrap accessibility plugin\"), person(\"Stefan\", \"Petre\", role = c(\"ctb\", \"cph\"), comment = \"Bootstrap-datepicker library\"), person(\"Andrew\", \"Rowls\", role = c(\"ctb\", \"cph\"), comment = \"Bootstrap-datepicker library\"), person(\"Brian\", \"Reavis\", role = c(\"ctb\", \"cph\"), comment = \"selectize.js library\"), person(\"Salmen\", \"Bejaoui\", role = c(\"ctb\", \"cph\"), comment = \"selectize-plugin-a11y library\"), person(\"Denis\", \"Ineshin\", role = c(\"ctb\", \"cph\"), comment = \"ion.rangeSlider library\"), person(\"Sami\", \"Samhuri\", role = c(\"ctb\", \"cph\"), comment = \"Javascript strftime library\"), person(, \"SpryMedia Limited\", role = c(\"ctb\", \"cph\"), comment = \"DataTables library\"), person(\"Ivan\", \"Sagalaev\", role = c(\"ctb\", \"cph\"), comment = \"highlight.js library\"), person(\"R Core Team\", role = c(\"ctb\", \"cph\"), comment = \"tar implementation from R\") )", - "Description": "Makes it incredibly easy to build interactive web applications with R. Automatic \"reactive\" binding between inputs and outputs and extensive prebuilt widgets make it possible to build beautiful, responsive, and powerful applications with minimal effort.", - "License": "MIT + file LICENSE", - "URL": "https://shiny.posit.co/, https://github.com/rstudio/shiny", - "BugReports": "https://github.com/rstudio/shiny/issues", - "Depends": [ - "methods", - "R (>= 3.1.2)" - ], - "Imports": [ - "bslib (>= 0.6.0)", - "cachem (>= 1.1.0)", - "cli", - "commonmark (>= 2.0.0)", - "fastmap (>= 1.1.1)", - "fontawesome (>= 0.4.0)", - "glue (>= 1.3.2)", - "grDevices", - "htmltools (>= 0.5.4)", - "httpuv (>= 1.5.2)", - "jsonlite (>= 0.9.16)", - "later (>= 1.0.0)", - "lifecycle (>= 0.2.0)", - "mime (>= 0.3)", - "otel", - "promises (>= 1.5.0)", - "R6 (>= 2.0)", - "rlang (>= 0.4.10)", - "sourcetools", - "tools", - "utils", - "withr", - "xtable" - ], - "Suggests": [ - "Cairo (>= 1.5-5)", - "coro (>= 1.1.0)", - "datasets", - "DT", - "dygraphs", - "future", - "ggplot2", - "knitr (>= 1.6)", - "magrittr", - "markdown", - "mirai", - "otelsdk (>= 0.2.0)", - "ragg", - "reactlog (>= 1.0.0)", - "rmarkdown", - "sass", - "showtext", - "testthat (>= 3.2.1)", - "watcher", - "yaml" - ], - "Config/Needs/check": "shinytest2", - "Config/testthat/edition": "3", - "Encoding": "UTF-8", - "RoxygenNote": "7.3.3", - "Collate": "'globals.R' 'app-state.R' 'app_template.R' 'bind-cache.R' 'bind-event.R' 'bookmark-state-local.R' 'bookmark-state.R' 'bootstrap-deprecated.R' 'bootstrap-layout.R' 'conditions.R' 'map.R' 'utils.R' 'bootstrap.R' 'busy-indicators-spinners.R' 'busy-indicators.R' 'cache-utils.R' 'deprecated.R' 'devmode.R' 'diagnose.R' 'extended-task.R' 'fileupload.R' 'graph.R' 'reactives.R' 'reactive-domains.R' 'history.R' 'hooks.R' 'html-deps.R' 'image-interact-opts.R' 'image-interact.R' 'imageutils.R' 'input-action.R' 'input-checkbox.R' 'input-checkboxgroup.R' 'input-date.R' 'input-daterange.R' 'input-file.R' 'input-numeric.R' 'input-password.R' 'input-radiobuttons.R' 'input-select.R' 'input-slider.R' 'input-submit.R' 'input-text.R' 'input-textarea.R' 'input-utils.R' 'insert-tab.R' 'insert-ui.R' 'jqueryui.R' 'knitr.R' 'middleware-shiny.R' 'middleware.R' 'timer.R' 'shiny.R' 'mock-session.R' 'modal.R' 'modules.R' 'notifications.R' 'otel-attr-srcref.R' 'otel-collect.R' 'otel-enable.R' 'otel-error.R' 'otel-label.R' 'otel-reactive-update.R' 'otel-session.R' 'otel-shiny.R' 'otel-with.R' 'priorityqueue.R' 'progress.R' 'react.R' 'reexports.R' 'render-cached-plot.R' 'render-plot.R' 'render-table.R' 'run-url.R' 'runapp.R' 'serializers.R' 'server-input-handlers.R' 'server-resource-paths.R' 'server.R' 'shiny-options.R' 'shiny-package.R' 'shinyapp.R' 'shinyui.R' 'shinywrappers.R' 'showcase.R' 'snapshot.R' 'staticimports.R' 'tar.R' 'test-export.R' 'test-server.R' 'test.R' 'update-input.R' 'utils-lang.R' 'utils-tags.R' 'version_bs_date_picker.R' 'version_ion_range_slider.R' 'version_jquery.R' 'version_jqueryui.R' 'version_selectize.R' 'version_strftime.R' 'viewer.R'", - "NeedsCompilation": "no", - "Author": "Winston Chang [aut] (ORCID: ), Joe Cheng [aut], JJ Allaire [aut], Carson Sievert [aut, cre] (ORCID: ), Barret Schloerke [aut] (ORCID: ), Garrick Aden-Buie [aut] (ORCID: ), Yihui Xie [aut], Jeff Allen [aut], Jonathan McPherson [aut], Alan Dipert [aut], Barbara Borges [aut], Posit Software, PBC [cph, fnd] (ROR: ), jQuery Foundation [cph] (jQuery library and jQuery UI library), jQuery contributors [ctb, cph] (jQuery library; authors listed in inst/www/shared/jquery-AUTHORS.txt), jQuery UI contributors [ctb, cph] (jQuery UI library; authors listed in inst/www/shared/jqueryui/AUTHORS.txt), Mark Otto [ctb] (Bootstrap library), Jacob Thornton [ctb] (Bootstrap library), Bootstrap contributors [ctb] (Bootstrap library), Twitter, Inc [cph] (Bootstrap library), Prem Nawaz Khan [ctb] (Bootstrap accessibility plugin), Victor Tsaran [ctb] (Bootstrap accessibility plugin), Dennis Lembree [ctb] (Bootstrap accessibility plugin), Srinivasu Chakravarthula [ctb] (Bootstrap accessibility plugin), Cathy O'Connor [ctb] (Bootstrap accessibility plugin), PayPal, Inc [cph] (Bootstrap accessibility plugin), Stefan Petre [ctb, cph] (Bootstrap-datepicker library), Andrew Rowls [ctb, cph] (Bootstrap-datepicker library), Brian Reavis [ctb, cph] (selectize.js library), Salmen Bejaoui [ctb, cph] (selectize-plugin-a11y library), Denis Ineshin [ctb, cph] (ion.rangeSlider library), Sami Samhuri [ctb, cph] (Javascript strftime library), SpryMedia Limited [ctb, cph] (DataTables library), Ivan Sagalaev [ctb, cph] (highlight.js library), R Core Team [ctb, cph] (tar implementation from R)", - "Maintainer": "Carson Sievert ", - "Repository": "CRAN" - }, - "sjPlot": { - "Package": "sjPlot", - "Version": "2.9.0", - "Source": "Repository", - "Type": "Package", - "Encoding": "UTF-8", - "Title": "Data Visualization for Statistics in Social Science", - "Authors@R": "c( person(\"Daniel\", \"Lüdecke\", email = \"d.luedecke@uke.de\", role = c(\"aut\", \"cre\"), comment = c(ORCID = \"0000-0002-8895-3206\")), person(\"Alexander\", \"Bartel\", role = \"ctb\", comment = c(ORCID = \"0000-0002-1280-6138\")), person(\"Carsten\", \"Schwemmer\", email = \"carsten.schwemmer@uni-bamberg.de\", role = \"ctb\"), person(given = \"Chuck\", family = \"Powell\", role = \"ctb\", email = \"ibecav@gmail.com\", comment = c(ORCID = \"0000-0002-3606-2188\")), person(given = \"Amir\", family = \"Djalovski\", role = \"ctb\", email = \"Amir.DJV@gmail.com\"), person(given = \"Johannes\", family = \"Titz\", role = \"ctb\", email = \"johannes@titz.science\", comment = c(ORCID = \"0000-0002-1102-5719\")))", - "Maintainer": "Daniel Lüdecke ", - "Description": "Collection of plotting and table output functions for data visualization. Results of various statistical analyses (that are commonly used in social sciences) can be visualized using this package, including simple and cross tabulated frequencies, histograms, box plots, (generalized) linear models, mixed effects models, principal component analysis and correlation matrices, cluster analyses, scatter plots, stacked scales, effects plots of regression models (including interaction terms) and much more. This package supports labelled data.", - "License": "GPL-3", - "Depends": [ - "R (>= 4.1)" - ], - "Imports": [ - "graphics", - "grDevices", - "stats", - "utils", - "bayestestR (>= 0.16.1)", - "datawizard (>= 1.1.0)", - "dplyr", - "ggeffects", - "ggplot2 (>= 3.2.0)", - "knitr", - "insight (>= 1.3.1)", - "parameters (>= 0.27.0)", - "performance (>= 0.15.0)", - "purrr", - "rlang", - "scales", - "sjlabelled (>= 1.1.2)", - "sjmisc (>= 2.8.2)", - "sjstats (>= 0.17.8)", - "tidyr (>= 1.0.0)" - ], - "Suggests": [ - "brms", - "car", - "clubSandwich", - "cluster", - "cowplot", - "effects", - "haven", - "GPArotation", - "ggrepel", - "glmmTMB", - "gridExtra", - "ggridges", - "httr", - "lme4", - "MASS", - "nFactors", - "pscl", - "psych", - "rmarkdown", - "rstanarm", - "sandwich", - "splines", - "survey", - "TMB", - "testthat" - ], - "URL": "https://strengejacke.github.io/sjPlot/", - "BugReports": "https://github.com/strengejacke/sjPlot/issues", - "RoxygenNote": "7.3.2", - "VignetteBuilder": "knitr", - "NeedsCompilation": "no", - "Author": "Daniel Lüdecke [aut, cre] (ORCID: ), Alexander Bartel [ctb] (ORCID: ), Carsten Schwemmer [ctb], Chuck Powell [ctb] (ORCID: ), Amir Djalovski [ctb], Johannes Titz [ctb] (ORCID: )", - "Repository": "CRAN" - }, - "sjlabelled": { - "Package": "sjlabelled", - "Version": "1.2.0", - "Source": "Repository", - "Type": "Package", - "Encoding": "UTF-8", - "Title": "Labelled Data Utility Functions", - "Authors@R": "c( person(\"Daniel\", \"Lüdecke\", role = c(\"aut\", \"cre\"), email = \"d.luedecke@uke.de\", comment = c(ORCID = \"0000-0002-8895-3206\")), person(\"avid\", \"Ranzolin\", role = \"ctb\", email = \"daranzolin@gmail.com\"), person(\"Jonathan\", \"De Troye\", role = \"ctb\", email = \"detroyejr@outlook.com\") )", - "Maintainer": "Daniel Lüdecke ", - "Description": "Collection of functions dealing with labelled data, like reading and writing data between R and other statistical software packages like 'SPSS', 'SAS' or 'Stata', and working with labelled data. This includes easy ways to get, set or change value and variable label attributes, to convert labelled vectors into factors or numeric (and vice versa), or to deal with multiple declared missing values.", - "License": "GPL-3", - "Depends": [ - "R (>= 3.4)" - ], - "Imports": [ - "insight", - "datawizard", - "stats", - "tools", - "utils" - ], - "Suggests": [ - "dplyr", - "haven (>= 1.1.2)", - "magrittr", - "sjmisc", - "sjPlot", - "knitr", - "rlang", - "rmarkdown", - "snakecase", - "testthat" - ], - "URL": "https://strengejacke.github.io/sjlabelled/", - "BugReports": "https://github.com/strengejacke/sjlabelled/issues", - "RoxygenNote": "7.1.2", - "VignetteBuilder": "knitr", - "NeedsCompilation": "no", - "Author": "Daniel Lüdecke [aut, cre] (), avid Ranzolin [ctb], Jonathan De Troye [ctb]", - "Repository": "CRAN" - }, - "sjmisc": { - "Package": "sjmisc", - "Version": "2.8.11", - "Source": "Repository", - "Type": "Package", - "Encoding": "UTF-8", - "Title": "Data and Variable Transformation Functions", - "Authors@R": "c(person(\"Daniel\", \"Lüdecke\", role = c(\"aut\", \"cre\"), email = \"d.luedecke@uke.de\", comment = c(ORCID = \"0000-0002-8895-3206\")), person(\"Iago\", \"Giné-Vázquez\", role = c(\"ctb\"), email = \"i.gine@pssjd.org\"), person(\"Alexander\", \"Bartel\", role = \"ctb\", email = \"alexander.bartel@fu-berlin.de\", comment = c(ORCID = \"0000-0002-1280-6138\")))", - "Maintainer": "Daniel Lüdecke ", - "Description": "Collection of miscellaneous utility functions, supporting data transformation tasks like recoding, dichotomizing or grouping variables, setting and replacing missing values. The data transformation functions also support labelled data, and all integrate seamlessly into a 'tidyverse'-workflow.", - "License": "GPL-3", - "Depends": [ - "R (>= 3.4)" - ], - "Imports": [ - "dplyr", - "insight", - "datawizard", - "magrittr", - "methods", - "purrr", - "rlang", - "sjlabelled (>= 1.1.1)", - "stats", - "tidyselect", - "utils" - ], - "Suggests": [ - "ggplot2", - "graphics", - "haven (>= 2.0.0)", - "mice", - "nnet", - "sjPlot", - "sjstats", - "knitr", - "rmarkdown", - "stringdist", - "testthat", - "tidyr" - ], - "URL": "https://strengejacke.github.io/sjmisc/", - "BugReports": "https://github.com/strengejacke/sjmisc/issues", - "RoxygenNote": "7.3.2", - "VignetteBuilder": "knitr", - "NeedsCompilation": "no", - "Author": "Daniel Lüdecke [aut, cre] (ORCID: ), Iago Giné-Vázquez [ctb], Alexander Bartel [ctb] (ORCID: )", - "Repository": "CRAN" - }, - "sjstats": { - "Package": "sjstats", - "Version": "0.19.1", - "Source": "Repository", - "Type": "Package", - "Encoding": "UTF-8", - "Title": "Collection of Convenient Functions for Common Statistical Computations", - "Authors@R": "person(\"Daniel\", \"Lüdecke\", role = c(\"aut\", \"cre\"), email = \"d.luedecke@uke.de\", comment = c(ORCID = \"0000-0002-8895-3206\"))", - "Maintainer": "Daniel Lüdecke ", - "Description": "Collection of convenient functions for common statistical computations, which are not directly provided by R's base or stats packages. This package aims at providing, first, shortcuts for statistical measures, which otherwise could only be calculated with additional effort (like Cramer's V, Phi, or effect size statistics like Eta or Omega squared), or for which currently no functions available. Second, another focus lies on weighted variants of common statistical measures and tests like weighted standard error, mean, t-test, correlation, and more.", - "License": "GPL-3", - "Depends": [ - "R (>= 4.0)", - "utils" - ], - "Imports": [ - "datawizard", - "effectsize (>= 0.8.8)", - "insight", - "parameters", - "performance", - "stats" - ], - "Suggests": [ - "brms", - "car", - "coin", - "ggplot2", - "lme4", - "MASS", - "pscl", - "pwr", - "survey", - "testthat" - ], - "URL": "https://strengejacke.github.io/sjstats/", - "BugReports": "https://github.com/strengejacke/sjstats/issues", - "RoxygenNote": "7.3.2", - "Config/testthat/edition": "3", - "Config/testthat/parallel": "true", - "NeedsCompilation": "no", - "Author": "Daniel Lüdecke [aut, cre] (ORCID: )", - "Repository": "CRAN" - }, - "snowflakeauth": { - "Package": "snowflakeauth", - "Version": "0.2.2", - "Source": "Repository", - "Title": "Authentication Helpers for 'Snowflake'", - "Authors@R": "c( person(\"Aaron\", \"Jacobs\", , \"aaron.jacobs@posit.co\", role = c(\"aut\")), person(\"E. 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Includes utilities to automate checking of documentation and vignettes as a unit test during 'R CMD check'. Both British and American English are supported out of the box and other languages can be added. 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Compared to reference classes, R6 classes are simpler and lighter-weight, and they are not built on S4 classes so they do not require the methods package. These classes allow public and private members, and they support inheritance, even when the classes are defined in different packages.", + "License": "MIT + file LICENSE", + "URL": "https://r6.r-lib.org, https://github.com/r-lib/R6", + "BugReports": "https://github.com/r-lib/R6/issues", + "Depends": [ + "R (>= 3.6)" + ], + "Suggests": [ + "lobstr", + "testthat (>= 3.0.0)" + ], + "Config/Needs/website": "tidyverse/tidytemplate, ggplot2, microbenchmark, scales", + "Config/testthat/edition": "3", + "Encoding": "UTF-8", + "RoxygenNote": "7.3.2", + "NeedsCompilation": "no", + "Author": "Winston Chang [aut, cre], Posit Software, PBC [cph, fnd]", + "Maintainer": "Winston Chang ", + "Repository": "CRAN" + }, + "RColorBrewer": { + "Package": "RColorBrewer", + "Version": "1.1-3", + "Source": "Repository", + "Date": "2022-04-03", + "Title": "ColorBrewer Palettes", + "Authors@R": "c(person(given = \"Erich\", family = \"Neuwirth\", role = c(\"aut\", \"cre\"), email = \"erich.neuwirth@univie.ac.at\"))", + "Author": "Erich Neuwirth [aut, cre]", + "Maintainer": "Erich Neuwirth ", + "Depends": [ + "R (>= 2.0.0)" + ], + "Description": "Provides color schemes for maps (and other graphics) designed by Cynthia Brewer as described at http://colorbrewer2.org.", + "License": "Apache License 2.0", + "NeedsCompilation": "no", + "Repository": "CRAN" + }, + "Rcpp": { + "Package": "Rcpp", + "Version": "1.1.1-1.1", + "Source": "Repository", + "Title": "Seamless R and C++ Integration", + "Date": "2026-04-19", + "Authors@R": "c(person(\"Dirk\", \"Eddelbuettel\", role = c(\"aut\", \"cre\"), email = \"edd@debian.org\", comment = c(ORCID = \"0000-0001-6419-907X\")), person(\"Romain\", \"Francois\", role = \"aut\", comment = c(ORCID = \"0000-0002-2444-4226\")), person(\"JJ\", \"Allaire\", role = \"aut\", comment = c(ORCID = \"0000-0003-0174-9868\")), person(\"Kevin\", \"Ushey\", role = \"aut\", comment = c(ORCID = \"0000-0003-2880-7407\")), person(\"Qiang\", \"Kou\", role = \"aut\", comment = c(ORCID = \"0000-0001-6786-5453\")), person(\"Nathan\", \"Russell\", role = \"aut\"), person(\"I\u00f1aki\", \"Ucar\", role = \"aut\", comment = c(ORCID = \"0000-0001-6403-5550\")), person(\"Doug\", \"Bates\", role = \"aut\", comment = c(ORCID = \"0000-0001-8316-9503\")), person(\"John\", \"Chambers\", role = \"aut\"))", + "Description": "The 'Rcpp' package provides R functions as well as C++ classes which offer a seamless integration of R and C++. Many R data types and objects can be mapped back and forth to C++ equivalents which facilitates both writing of new code as well as easier integration of third-party libraries. Documentation about 'Rcpp' is provided by several vignettes included in this package, via the 'Rcpp Gallery' site at , the paper by Eddelbuettel and Francois (2011, ), the book by Eddelbuettel (2013, ) and the paper by Eddelbuettel and Balamuta (2018, ); see 'citation(\"Rcpp\")' for details.", + "Depends": [ + "R (>= 3.5.0)" + ], + "Imports": [ + "methods", + "utils" + ], + "Suggests": [ + "tinytest", + "inline", + "rbenchmark", + "pkgKitten (>= 0.1.2)" + ], + "URL": "https://www.rcpp.org, https://dirk.eddelbuettel.com/code/rcpp.html, https://github.com/RcppCore/Rcpp", + "License": "GPL (>= 2)", + "BugReports": "https://github.com/RcppCore/Rcpp/issues", + "MailingList": "rcpp-devel@lists.r-forge.r-project.org", + "RoxygenNote": "6.1.1", + "Encoding": "UTF-8", + "VignetteBuilder": "Rcpp", + "NeedsCompilation": "yes", + "Author": "Dirk Eddelbuettel [aut, cre] (ORCID: ), Romain Francois [aut] (ORCID: ), JJ Allaire [aut] (ORCID: ), Kevin Ushey [aut] (ORCID: ), Qiang Kou [aut] (ORCID: ), Nathan Russell [aut], I\u00f1aki Ucar [aut] (ORCID: ), Doug Bates [aut] (ORCID: ), John Chambers [aut]", + "Maintainer": "Dirk Eddelbuettel ", + "Repository": "CRAN" + }, + "RcppArmadillo": { + "Package": "RcppArmadillo", + "Version": "15.2.6-1", + "Source": "Repository", + "Type": "Package", + "Title": "'Rcpp' Integration for the 'Armadillo' Templated Linear Algebra Library", + "Date": "2026-04-20", + "Authors@R": "c(person(\"Dirk\", \"Eddelbuettel\", role = c(\"aut\", \"cre\"), email = \"edd@debian.org\", comment = c(ORCID = \"0000-0001-6419-907X\")), person(\"Romain\", \"Francois\", role = \"aut\", comment = c(ORCID = \"0000-0002-2444-4226\")), person(\"Doug\", \"Bates\", role = \"aut\", comment = c(ORCID = \"0000-0001-8316-9503\")), person(\"Binxiang\", \"Ni\", role = \"aut\"), person(\"Conrad\", \"Sanderson\", role = \"aut\", comment = c(ORCID = \"0000-0002-0049-4501\")))", + "Description": "'Armadillo' is a templated C++ linear algebra library aiming towards a good balance between speed and ease of use. It provides high-level syntax and functionality deliberately similar to Matlab. It is useful for algorithm development directly in C++, or quick conversion of research code into production environments. It provides efficient classes for vectors, matrices and cubes where dense and sparse matrices are supported. Integer, floating point and complex numbers are supported. A sophisticated expression evaluator (based on template meta-programming) automatically combines several operations to increase speed and efficiency. Dynamic evaluation automatically chooses optimal code paths based on detected matrix structures. Matrix decompositions are provided through integration with LAPACK, or one of its high performance drop-in replacements (such as 'MKL' or 'OpenBLAS'). It can automatically use 'OpenMP' multi-threading (parallelisation) to speed up computationally expensive operations. . The 'RcppArmadillo' package includes the header files from the 'Armadillo' library; users do not need to install 'Armadillo' itself in order to use 'RcppArmadillo'. Starting from release 15.0.0, the minimum compilation standard is C++14. . Since release 7.800.0, 'Armadillo' is licensed under Apache License 2; previous releases were under licensed as MPL 2.0 from version 3.800.0 onwards and LGPL-3 prior to that; 'RcppArmadillo' (the 'Rcpp' bindings/bridge to Armadillo) is licensed under the GNU GPL version 2 or later, as is the rest of 'Rcpp'.", + "License": "GPL (>= 2)", + "LazyLoad": "yes", + "Depends": [ + "R (>= 3.3.0)" + ], + "LinkingTo": [ + "Rcpp" + ], + "Imports": [ + "Rcpp (>= 1.1.1)", + "stats", + "utils", + "methods" + ], + "Suggests": [ + "tinytest", + "Matrix (>= 1.3.0)", + "pkgKitten", + "reticulate", + "slam" + ], + "URL": "https://github.com/RcppCore/RcppArmadillo, https://dirk.eddelbuettel.com/code/rcpp.armadillo.html", + "BugReports": "https://github.com/RcppCore/RcppArmadillo/issues", + "RoxygenNote": "6.0.1", + "Encoding": "UTF-8", + "VignetteBuilder": "Rcpp", + "NeedsCompilation": "yes", + "Author": "Dirk Eddelbuettel [aut, cre] (ORCID: ), Romain Francois [aut] (ORCID: ), Doug Bates [aut] (ORCID: ), Binxiang Ni [aut], Conrad Sanderson [aut] (ORCID: )", + "Maintainer": "Dirk Eddelbuettel ", + "Repository": "CRAN" + }, + "RcppEigen": { + "Package": "RcppEigen", + "Version": "0.3.4.0.2", + "Source": "Repository", + "Type": "Package", + "Title": "'Rcpp' Integration for the 'Eigen' Templated Linear Algebra Library", + "Date": "2024-08-23", + "Authors@R": "c(person(\"Doug\", \"Bates\", role = \"aut\", comment = c(ORCID = \"0000-0001-8316-9503\")), person(\"Dirk\", \"Eddelbuettel\", role = c(\"aut\", \"cre\"), email = \"edd@debian.org\", comment = c(ORCID = \"0000-0001-6419-907X\")), person(\"Romain\", \"Francois\", role = \"aut\", comment = c(ORCID = \"0000-0002-2444-4226\")), person(\"Yixuan\", \"Qiu\", role = \"aut\", comment = c(ORCID = \"0000-0003-0109-6692\")), person(\"Authors of\", \"Eigen\", role = \"cph\", comment = \"Authorship and copyright in included Eigen library as detailed in inst/COPYRIGHTS\"))", + "Copyright": "See the file COPYRIGHTS for various Eigen copyright details", + "Description": "R and 'Eigen' integration using 'Rcpp'. 'Eigen' is a C++ template library for linear algebra: matrices, vectors, numerical solvers and related algorithms. It supports dense and sparse matrices on integer, floating point and complex numbers, decompositions of such matrices, and solutions of linear systems. Its performance on many algorithms is comparable with some of the best implementations based on 'Lapack' and level-3 'BLAS'. The 'RcppEigen' package includes the header files from the 'Eigen' C++ template library. Thus users do not need to install 'Eigen' itself in order to use 'RcppEigen'. Since version 3.1.1, 'Eigen' is licensed under the Mozilla Public License (version 2); earlier version were licensed under the GNU LGPL version 3 or later. 'RcppEigen' (the 'Rcpp' bindings/bridge to 'Eigen') is licensed under the GNU GPL version 2 or later, as is the rest of 'Rcpp'.", + "License": "GPL (>= 2) | file LICENSE", + "LazyLoad": "yes", + "Depends": [ + "R (>= 3.6.0)" + ], + "LinkingTo": [ + "Rcpp" + ], + "Imports": [ + "Rcpp (>= 0.11.0)", + "stats", + "utils" + ], + "Suggests": [ + "Matrix", + "inline", + "tinytest", + "pkgKitten", + "microbenchmark" + ], + "URL": "https://github.com/RcppCore/RcppEigen, https://dirk.eddelbuettel.com/code/rcpp.eigen.html", + "BugReports": "https://github.com/RcppCore/RcppEigen/issues", + "NeedsCompilation": "yes", + "Author": "Doug Bates [aut] (), Dirk Eddelbuettel [aut, cre] (), Romain Francois [aut] (), Yixuan Qiu [aut] (), Authors of Eigen [cph] (Authorship and copyright in included Eigen library as detailed in inst/COPYRIGHTS)", + "Maintainer": "Dirk Eddelbuettel ", + "Repository": "CRAN" + }, + "RcppTOML": { + "Package": "RcppTOML", + "Version": "0.2.3", + "Source": "Repository", + "Type": "Package", + "Title": "'Rcpp' Bindings to Parser for \"Tom's Obvious Markup Language\"", + "Date": "2025-03-08", + "Authors@R": "c(person(\"Dirk\", \"Eddelbuettel\", role = c(\"aut\", \"cre\"), email = \"edd@debian.org\", comment = c(ORCID = \"0000-0001-6419-907X\")), person(\"Mark\", \"Gillard\", role = \"aut\", comment = \"Author of 'toml++' header library\"))", + "Description": "The configuration format defined by 'TOML' (which expands to \"Tom's Obvious Markup Language\") specifies an excellent format (described at ) suitable for both human editing as well as the common uses of a machine-readable format. This package uses 'Rcpp' to connect to the 'toml++' parser written by Mark Gillard to R.", + "SystemRequirements": "A C++17 compiler", + "BugReports": "https://github.com/eddelbuettel/rcpptoml/issues", + "URL": "http://dirk.eddelbuettel.com/code/rcpp.toml.html", + "Imports": [ + "Rcpp (>= 1.0.8)" + ], + "Depends": [ + "R (>= 3.3.0)" + ], + "LinkingTo": [ + "Rcpp" + ], + "Suggests": [ + "tinytest" + ], + "License": "GPL (>= 2)", + "NeedsCompilation": "yes", + "Author": "Dirk Eddelbuettel [aut, cre] (), Mark Gillard [aut] (Author of 'toml++' header library)", + "Maintainer": "Dirk Eddelbuettel ", + "Repository": "CRAN" + }, + "Rdpack": { + "Package": "Rdpack", + "Version": "2.6.6", + "Source": "Repository", + "Type": "Package", + "Title": "Update and Manipulate Rd Documentation Objects", + "Authors@R": "c( person(given = c(\"Georgi\", \"N.\"), family = \"Boshnakov\", role = c(\"aut\", \"cre\"), email = \"georgi.boshnakov@manchester.ac.uk\", comment = c(ORCID = \"0000-0003-2839-346X\")), person(given = \"Duncan\", family = \"Murdoch\", role = \"ctb\", email = \"murdoch.duncan@gmail.com\") )", + "Description": "Functions for manipulation of R documentation objects, including functions reprompt() and ereprompt() for updating 'Rd' documentation for functions, methods and classes; 'Rd' macros for citations and import of references from 'bibtex' files for use in 'Rd' files and 'roxygen2' comments; 'Rd' macros for evaluating and inserting snippets of 'R' code and the results of its evaluation or creating graphics on the fly; and many functions for manipulation of references and Rd files.", + "URL": "https://geobosh.github.io/Rdpack/ (doc), https://CRAN.R-project.org/package=Rdpack", + "BugReports": "https://github.com/GeoBosh/Rdpack/issues", + "Depends": [ + "R (>= 2.15.0)", + "methods" + ], + "Imports": [ + "tools", + "utils", + "rbibutils (> 2.4)" + ], + "Suggests": [ + "grDevices", + "testthat", + "rstudioapi", + "rprojroot", + "gbRd" + ], + "License": "GPL (>= 2)", + "LazyLoad": "yes", + "Encoding": "UTF-8", + "RoxygenNote": "7.1.1", + "NeedsCompilation": "no", + "Author": "Georgi N. Boshnakov [aut, cre] (ORCID: ), Duncan Murdoch [ctb]", + "Maintainer": "Georgi N. Boshnakov ", + "Repository": "CRAN" + }, + "S7": { + "Package": "S7", + "Version": "0.2.2", + "Source": "Repository", + "Title": "An Object Oriented System Meant to Become a Successor to S3 and S4", + "Authors@R": "c( person(\"Object-Oriented Programming Working Group\", role = \"cph\"), person(\"Davis\", \"Vaughan\", role = \"aut\"), person(\"Jim\", \"Hester\", role = \"aut\", comment = c(ORCID = \"0000-0002-2739-7082\")), person(\"Tomasz\", \"Kalinowski\", role = \"aut\"), person(\"Will\", \"Landau\", role = \"aut\"), person(\"Michael\", \"Lawrence\", role = \"aut\"), person(\"Martin\", \"Maechler\", role = \"aut\", comment = c(ORCID = \"0000-0002-8685-9910\")), person(\"Luke\", \"Tierney\", role = \"aut\"), person(\"Hadley\", \"Wickham\", , \"hadley@posit.co\", role = c(\"aut\", \"cre\"), comment = c(ORCID = \"0000-0003-4757-117X\")) )", + "Description": "A new object oriented programming system designed to be a successor to S3 and S4. It includes formal class, generic, and method specification, and a limited form of multiple dispatch. It has been designed and implemented collaboratively by the R Consortium Object-Oriented Programming Working Group, which includes representatives from R-Core, 'Bioconductor', 'Posit'/'tidyverse', and the wider R community.", + "License": "MIT + file LICENSE", + "URL": "https://rconsortium.github.io/S7/, https://github.com/RConsortium/S7", + "BugReports": "https://github.com/RConsortium/S7/issues", + "Depends": [ + "R (>= 3.5.0)" + ], + "Imports": [ + "utils" + ], + "Suggests": [ + "bench", + "callr", + "covr", + "knitr", + "methods", + "rmarkdown", + "testthat (>= 3.2.0)", + "tibble" + ], + "VignetteBuilder": "knitr", + "Config/build/compilation-database": "true", + "Config/Needs/website": "sloop", + "Config/testthat/edition": "3", + "Config/testthat/parallel": "TRUE", + "Config/testthat/start-first": "external-generic", + "Encoding": "UTF-8", + "RoxygenNote": "7.3.3", + "NeedsCompilation": "yes", + "Author": "Object-Oriented Programming Working Group [cph], Davis Vaughan [aut], Jim Hester [aut] (ORCID: ), Tomasz Kalinowski [aut], Will Landau [aut], Michael Lawrence [aut], Martin Maechler [aut] (ORCID: ), Luke Tierney [aut], Hadley Wickham [aut, cre] (ORCID: )", + "Maintainer": "Hadley Wickham ", + "Repository": "CRAN" + }, + "SparseM": { + "Package": "SparseM", + "Version": "1.84-2", + "Source": "Repository", + "Authors@R": "c( person(\"Roger\", \"Koenker\", role = c(\"cre\",\"aut\"), email = \"rkoenker@uiuc.edu\"), person(c(\"Pin\", \"Tian\"), \"Ng\", role = c(\"ctb\"), comment = \"Contributions to Sparse QR code\", email = \"pin.ng@nau.edu\") , person(\"Yousef\", \"Saad\", role = c(\"ctb\"), comment = \"author of sparskit2\") , person(\"Ben\", \"Shaby\", role = c(\"ctb\"), comment = \"author of chol2csr\") , person(\"Martin\", \"Maechler\", role = \"ctb\", comment = c(\"chol() tweaks; S4\", ORCID = \"0000-0002-8685-9910\")) )", + "Maintainer": "Roger Koenker ", + "Depends": [ + "R (>= 2.15)", + "methods" + ], + "Imports": [ + "graphics", + "stats", + "utils" + ], + "VignetteBuilder": "knitr", + "Suggests": [ + "knitr" + ], + "Description": "Some basic linear algebra functionality for sparse matrices is provided: including Cholesky decomposition and backsolving as well as standard R subsetting and Kronecker products.", + "License": "GPL (>= 2)", + "Title": "Sparse Linear Algebra", + "URL": "http://www.econ.uiuc.edu/~roger/research/sparse/sparse.html", + "NeedsCompilation": "yes", + "Author": "Roger Koenker [cre, aut], Pin Tian Ng [ctb] (Contributions to Sparse QR code), Yousef Saad [ctb] (author of sparskit2), Ben Shaby [ctb] (author of chol2csr), Martin Maechler [ctb] (chol() tweaks; S4, )", + "Repository": "CRAN" + }, + "TMB": { + "Package": "TMB", + "Version": "1.9.21", + "Source": "Repository", + "Type": "Package", + "Title": "Template Model Builder: A General Random Effect Tool Inspired by 'ADMB'", + "Date": "2026-03-22", + "Authors@R": "c(person(\"Kasper\",\"Kristensen\",role=c(\"aut\",\"cre\",\"cph\"),email=\"kaskr@dtu.dk\"), person(\"Brad\",\"Bell\",role=\"cph\"), person(\"Hans\",\"Skaug\",role=\"ctb\"), person(\"Arni\",\"Magnusson\",role=\"ctb\"), person(\"Casper\",\"Berg\",role=\"ctb\"), person(\"Anders\",\"Nielsen\",role=\"ctb\"), person(\"Martin\",\"Maechler\",role=\"ctb\"), person(\"Theo\",\"Michelot\",role=\"ctb\"), person(\"Mollie\",\"Brooks\",role=\"ctb\"), person(\"Alex\",\"Forrence\",role=\"ctb\"), person(\"Christoffer\",\"Moesgaard Albertsen\",role=\"ctb\"), person(\"Cole\",\"Monnahan\",role=\"ctb\") )", + "Maintainer": "Kasper Kristensen ", + "Author": "Kasper Kristensen [aut, cre, cph], Brad Bell [cph], Hans Skaug [ctb], Arni Magnusson [ctb], Casper Berg [ctb], Anders Nielsen [ctb], Martin Maechler [ctb], Theo Michelot [ctb], Mollie Brooks [ctb], Alex Forrence [ctb], Christoffer Moesgaard Albertsen [ctb], Cole Monnahan [ctb]", + "Copyright": "See the file COPYRIGHTS", + "Description": "With this tool, a user should be able to quickly implement complex random effect models through simple C++ templates. The package combines 'CppAD' (C++ automatic differentiation), 'Eigen' (templated matrix-vector library) and 'CHOLMOD' (sparse matrix routines available from R) to obtain an efficient implementation of the applied Laplace approximation with exact derivatives. Key features are: Automatic sparseness detection, parallelism through 'BLAS' and parallel user templates.", + "License": "GPL-2", + "URL": "https://github.com/kaskr/adcomp/wiki", + "BugReports": "https://github.com/kaskr/adcomp/issues", + "Depends": [ + "R (>= 3.0.0)" + ], + "Imports": [ + "graphics", + "methods", + "stats", + "utils", + "Matrix (>= 1.0-12)" + ], + "LinkingTo": [ + "Matrix", + "RcppEigen" + ], + "Suggests": [ + "numDeriv", + "parallel" + ], + "RoxygenNote": "7.3.3", + "NeedsCompilation": "yes", + "Repository": "CRAN" + }, + "V8": { + "Package": "V8", + "Version": "8.2.0", + "Source": "Repository", + "Type": "Package", + "Title": "Embedded JavaScript and WebAssembly Engine for R", + "Authors@R": "c( person(\"Jeroen\", \"Ooms\", role = c(\"aut\", \"cre\"), email = \"jeroenooms@gmail.com\", comment = c(ORCID = \"0000-0002-4035-0289\")), person(\"George\", \"Stagg\", role = \"ctb\", comment = c(ORCID = \"0009-0006-3173-9846\")), person(\"Jan Marvin\", \"Garbuszus\", role = \"ctb\"))", + "Description": "An R interface to V8 : Google's open source JavaScript and WebAssembly engine. This package can be compiled either with V8 or NodeJS when built as a shared library.", + "License": "MIT + file LICENSE", + "URL": "https://jeroen.r-universe.dev/V8", + "BugReports": "https://github.com/jeroen/v8/issues", + "SystemRequirements": "On Linux you can build against libv8-dev (Debian) or v8-devel (Fedora). We also provide static libv8 binaries for most platforms, see the README for details.", + "NeedsCompilation": "yes", + "VignetteBuilder": "knitr", + "Imports": [ + "Rcpp (>= 0.12.12)", + "jsonlite (>= 1.0)", + "curl (>= 1.0)", + "utils" + ], + "LinkingTo": [ + "Rcpp" + ], + "Suggests": [ + "testthat", + "knitr", + "rmarkdown" + ], + "RoxygenNote": "7.3.1", + "Language": "en-US", + "Encoding": "UTF-8", + "Biarch": "true", + "Author": "Jeroen Ooms [aut, cre] (ORCID: ), George Stagg [ctb] (ORCID: ), Jan Marvin Garbuszus [ctb]", + "Maintainer": "Jeroen Ooms ", + "Repository": "CRAN" + }, + "abind": { + "Package": "abind", + "Version": "1.4-8", + "Source": "Repository", + "Date": "2024-09-08", + "Title": "Combine Multidimensional Arrays", + "Authors@R": "c(person(\"Tony\", \"Plate\", email = \"tplate@acm.org\", role = c(\"aut\", \"cre\")), person(\"Richard\", \"Heiberger\", role = c(\"aut\")))", + "Maintainer": "Tony Plate ", + "Description": "Combine multidimensional arrays into a single array. This is a generalization of 'cbind' and 'rbind'. Works with vectors, matrices, and higher-dimensional arrays (aka tensors). Also provides functions 'adrop', 'asub', and 'afill' for manipulating, extracting and replacing data in arrays.", + "Depends": [ + "R (>= 1.5.0)" + ], + "Imports": [ + "methods", + "utils" + ], + "License": "MIT + file LICENSE", + "NeedsCompilation": "no", + "Author": "Tony Plate [aut, cre], Richard Heiberger [aut]", + "Repository": "CRAN" + }, + "arm": { + "Package": "arm", + "Version": "1.15-3", + "Source": "Repository", + "Date": "2026-4-15", + "Title": "Data Analysis Using Regression and Multilevel/Hierarchical Models", + "Authors@R": "c(person(\"Andrew\", \"Gelman\", role = \"aut\", email = \"gelman@stat.columbia.edu\"), person(\"Yu-Sung\", \"Su\", role = c(\"aut\", \"cre\"), email = \"suyusung@tsinghua.edu.cn\", comment = c(ORCID = \"0000-0001-5021-8209\")), person(\"Masanao\", \"Yajima\", role = \"ctb\", email = \"yajima@bu.edu\"), person(\"Jennifer\", \"Hill\", role = \"ctb\", email = \"jennifer.hill@nyu.edu\"), person(\"Maria Grazia\", \"Pittau\", role = \"ctb\", email = \"grazia@stat.columbia.edu\"), person(\"Jouni\", \"Kerman\", role = \"ctb\", email = \"jouni@kerman.com\"), person(\"Tian\", \"Zheng\", role = \"ctb\", email = \"tzheng@stat.columbia.edu\"), person(\"Vincent\", \"Dorie\", role = \"ctb\", email = \"vjd4@nyu.edu\") )", + "Author": "Andrew Gelman [aut], Yu-Sung Su [aut, cre] (ORCID: ), Masanao Yajima [ctb], Jennifer Hill [ctb], Maria Grazia Pittau [ctb], Jouni Kerman [ctb], Tian Zheng [ctb], Vincent Dorie [ctb]", + "Maintainer": "Yu-Sung Su ", + "BugReports": "https://github.com/suyusung/arm/issues/", + "Depends": [ + "R (>= 3.1.0)", + "MASS", + "Matrix (>= 1.6-1.1)", + "stats", + "lme4 (>= 1.0)" + ], + "Imports": [ + "abind", + "coda", + "graphics", + "grDevices", + "methods", + "nlme", + "utils" + ], + "Description": "Functions to accompany A. 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Hill, Data Analysis Using Regression and Multilevel/Hierarchical Models, Cambridge University Press, 2007.", + "License": "GPL (>= 2)", + "URL": "https://CRAN.R-project.org/package=arm", + "NeedsCompilation": "no", + "Repository": "CRAN" + }, + "arsenal": { + "Package": "arsenal", + "Version": "3.6.3", + "Source": "Repository", + "Title": "An Arsenal of 'R' Functions for Large-Scale Statistical Summaries", + "Date": "2021-06-04", + "Authors@R": "c( person(\"Ethan\", \"Heinzen\", email = \"heinzen.ethan@mayo.edu\", role = c(\"aut\", \"cre\")), person(\"Jason\", \"Sinnwell\", role=\"aut\"), person(\"Elizabeth\", \"Atkinson\", role=\"aut\"), person(\"Tina\", \"Gunderson\", role=\"aut\"), person(\"Gregory\", \"Dougherty\", role=\"aut\"), person(\"Patrick\", \"Votruba\", role=\"ctb\"), person(\"Ryan\", \"Lennon\", role=\"ctb\"), person(\"Andrew\", \"Hanson\", role=\"ctb\"), person(\"Krista\", \"Goergen\", role=\"ctb\"), person(\"Emily\", \"Lundt\", role=\"ctb\"), person(\"Brendan\", \"Broderick\", role=\"ctb\"), person(\"Maddie\", \"McCullough\", role=\"art\") )", + "Description": "An Arsenal of 'R' functions for large-scale statistical summaries, which are streamlined to work within the latest reporting tools in 'R' and 'RStudio' and which use formulas and versatile summary statistics for summary tables and models. The primary functions include tableby(), a Table-1-like summary of multiple variable types 'by' the levels of one or more categorical variables; paired(), a Table-1-like summary of multiple variable types paired across two time points; modelsum(), which performs simple model fits on one or more endpoints for many variables (univariate or adjusted for covariates); freqlist(), a powerful frequency table across many categorical variables; comparedf(), a function for comparing data.frames; and write2(), a function to output tables to a document.", + "Suggests": [ + "broom (>= 0.7.1)", + "magrittr", + "rmarkdown", + "testthat", + "xtable", + "pander", + "survival (>= 2.43-1)", + "coin", + "pROC", + "MASS", + "splines", + "rpart", + "yaml", + "geepack" + ], + "Depends": [ + "R (>= 3.4.0)", + "stats (>= 3.4.0)" + ], + "Imports": [ + "knitr (>= 1.29)", + "utils (>= 3.4.0)" + ], + "URL": "https://github.com/mayoverse/arsenal, https://cran.r-project.org/package=arsenal, https://mayoverse.github.io/arsenal/", + "BugReports": "https://github.com/mayoverse/arsenal/issues", + "VignetteBuilder": "knitr", + "License": "GPL (>= 2)", + "RoxygenNote": "7.1.1", + "LazyData": "true", + "Encoding": "UTF-8", + "NeedsCompilation": "no", + "Author": "Ethan Heinzen [aut, cre], Jason Sinnwell [aut], Elizabeth Atkinson [aut], Tina Gunderson [aut], Gregory Dougherty [aut], Patrick Votruba [ctb], Ryan Lennon [ctb], Andrew Hanson [ctb], Krista Goergen [ctb], Emily Lundt [ctb], Brendan Broderick [ctb], Maddie McCullough [art]", + "Maintainer": "Ethan Heinzen ", + "Repository": "CRAN" + }, + "askpass": { + "Package": "askpass", + "Version": "1.2.1", + "Source": "Repository", + "Type": "Package", + "Title": "Password Entry Utilities for R, Git, and SSH", + "Authors@R": "person(\"Jeroen\", \"Ooms\", role = c(\"aut\", \"cre\"), email = \"jeroenooms@gmail.com\", comment = c(ORCID = \"0000-0002-4035-0289\"))", + "Description": "Cross-platform utilities for prompting the user for credentials or a passphrase, for example to authenticate with a server or read a protected key. Includes native programs for MacOS and Windows, hence no 'tcltk' is required. Password entry can be invoked in two different ways: directly from R via the askpass() function, or indirectly as password-entry back-end for 'ssh-agent' or 'git-credential' via the SSH_ASKPASS and GIT_ASKPASS environment variables. Thereby the user can be prompted for credentials or a passphrase if needed when R calls out to git or ssh.", + "License": "MIT + file LICENSE", + "URL": "https://r-lib.r-universe.dev/askpass", + "BugReports": "https://github.com/r-lib/askpass/issues", + "Encoding": "UTF-8", + "Imports": [ + "sys (>= 2.1)" + ], + "RoxygenNote": "7.2.3", + "Suggests": [ + "testthat" + ], + "Language": "en-US", + "NeedsCompilation": "yes", + "Author": "Jeroen Ooms [aut, cre] ()", + "Maintainer": "Jeroen Ooms ", + "Repository": "CRAN" + }, + "backports": { + "Package": "backports", + "Version": "1.5.1", + "Source": "Repository", + "Type": "Package", + "Title": "Reimplementations of Functions Introduced Since R-3.0.0", + "Authors@R": "c( person(\"Michel\", \"Lang\", NULL, \"michellang@gmail.com\", role = c(\"cre\", \"aut\"), comment = c(ORCID = \"0000-0001-9754-0393\")), person(\"Duncan\", \"Murdoch\", NULL, \"murdoch.duncan@gmail.com\", role = c(\"aut\")), person(\"R Core Team\", role = \"aut\"))", + "Maintainer": "Michel Lang ", + "Description": "Functions introduced or changed since R v3.0.0 are re-implemented in this package. The backports are conditionally exported in order to let R resolve the function name to either the implemented backport, or the respective base version, if available. 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It includes point-estimates such as Maximum A Posteriori (MAP), measures of dispersion (Highest Density Interval - HDI; Kruschke, 2015 ) and indices used for null-hypothesis testing (such as ROPE percentage, pd and Bayes factors). References: Makowski et al. (2021) .", + "Depends": [ + "R (>= 3.6)" + ], + "Imports": [ + "insight (>= 1.4.1)", + "datawizard (>= 1.2.0)", + "graphics", + "methods", + "stats", + "utils" + ], + "Suggests": [ + "BayesFactor (>= 0.9.12-4.4)", + "bayesQR", + "bayesplot", + "betareg", + "BH", + "blavaan", + "bridgesampling", + "brms", + "collapse", + "curl", + "effectsize", + "emmeans", + "gamm4", + "ggdist", + "ggplot2", + "glmmTMB", + "httr2", + "KernSmooth", + "knitr", + "lavaan", + "lme4", + "logspline (>= 2.1.21)", + "marginaleffects (>= 0.29.0)", + "MASS", + "mclust", + "mediation", + "modelbased", + "ordbetareg", + "parameters", + "patchwork", + "performance", + "posterior", + "quadprog", + "RcppEigen", + "rmarkdown", + "rstan", + "rstanarm", + "see (>= 0.8.5)", + "testthat", + "tinytable", + "tweedie", + "withr" + ], + "License": "GPL-3", + "URL": "https://easystats.github.io/bayestestR/", + "BugReports": "https://github.com/easystats/bayestestR/issues", + "VignetteBuilder": "knitr", + "Encoding": "UTF-8", + "Language": "en-US", + "RoxygenNote": "7.3.2", + "Config/testthat/edition": "3", + "Config/testthat/parallel": "true", + "Config/rcmdcheck/ignore-inconsequential-notes": "true", + "Config/Needs/website": "easystats/easystatstemplate", + "Config/Needs/check": "stan-dev/cmdstanr", + "NeedsCompilation": "no", + "Author": "Dominique Makowski [aut, cre] (ORCID: ), Daniel L\u00fcdecke [aut] (ORCID: ), Mattan S. 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Several of the provided helper functions allow for automatic generation of locale-aware formatting patterns based on date/time skeleton formats and standardized date/time formats with varying specificity.", + "Authors@R": "c( person(\"Richard\", \"Iannone\", , \"rich@posit.co\", role = c(\"aut\", \"cre\"), comment = c(ORCID = \"0000-0003-3925-190X\")), person(\"Olivier\", \"Roy\", role = \"ctb\"), person(\"Posit Software, PBC\", role = c(\"cph\", \"fnd\")) )", + "License": "MIT + file LICENSE", + "URL": "https://rstudio.github.io/bigD/, https://github.com/rstudio/bigD", + "BugReports": "https://github.com/rstudio/bigD/issues", + "Encoding": "UTF-8", + "RoxygenNote": "7.3.2", + "Depends": [ + "R (>= 3.6.0)" + ], + "Suggests": [ + "testthat (>= 3.0.0)", + "vctrs (>= 0.5.0)" + ], + "Config/testthat/edition": "3", + "Config/testthat/parallel": "true", + "NeedsCompilation": "no", + "Author": "Richard Iannone [aut, cre] (), Olivier Roy [ctb], Posit Software, PBC [cph, fnd]", + "Maintainer": "Richard Iannone ", + "Repository": "CRAN" + }, + "binom": { + "Package": "binom", + "Version": "1.1-1.1", + "Source": "Repository", + "Title": "Binomial Confidence Intervals for Several Parameterizations", + "Date": "2014-01-01", + "Author": "Sundar Dorai-Raj ", + "Description": "Constructs confidence intervals on the probability of success in a binomial experiment via several parameterizations.", + "Maintainer": "Sundar Dorai-Raj ", + "Suggests": [ + "lattice", + "polynom", + "tcltk", + "ggplot2" + ], + "License": "GPL", + "NeedsCompilation": "yes", + "Repository": "CRAN" + }, + "bit": { + "Package": "bit", + "Version": "4.6.0", + "Source": "Repository", + "Title": "Classes and Methods for Fast Memory-Efficient Boolean Selections", + "Authors@R": "c( person(\"Michael\", \"Chirico\", email = \"MichaelChirico4@gmail.com\", role = c(\"aut\", \"cre\")), person(\"Jens\", \"Oehlschl\u00e4gel\", role = \"aut\"), person(\"Brian\", \"Ripley\", role = \"ctb\") )", + "Depends": [ + "R (>= 3.4.0)" + ], + "Suggests": [ + "testthat (>= 3.0.0)", + "roxygen2", + "knitr", + "markdown", + "rmarkdown", + "microbenchmark", + "bit64 (>= 4.0.0)", + "ff (>= 4.0.0)" + ], + "Description": "Provided are classes for boolean and skewed boolean vectors, fast boolean methods, fast unique and non-unique integer sorting, fast set operations on sorted and unsorted sets of integers, and foundations for ff (range index, compression, chunked processing).", + "License": "GPL-2 | GPL-3", + "LazyLoad": "yes", + "ByteCompile": "yes", + "Encoding": "UTF-8", + "URL": "https://github.com/r-lib/bit", + "VignetteBuilder": "knitr, rmarkdown", + "RoxygenNote": "7.3.2", + "Config/testthat/edition": "3", + "NeedsCompilation": "yes", + "Author": "Michael Chirico [aut, cre], Jens Oehlschl\u00e4gel [aut], Brian Ripley [ctb]", + "Maintainer": "Michael Chirico ", + "Repository": "CRAN" + }, + "bit64": { + "Package": "bit64", + "Version": "4.8.0", + "Source": "Repository", + "Title": "A S3 Class for Vectors of 64bit Integers", + "Authors@R": "c( person(\"Michael\", \"Chirico\", email=\"michaelchirico4@gmail.com\", role=c(\"aut\", \"cre\")), person(\"Jens\", \"Oehlschl\u00e4gel\", role=\"aut\"), person(\"Leonardo\", \"Silvestri\", role=\"ctb\"), person(\"Ofek\", \"Shilon\", role=\"ctb\"), person(\"Christian\", \"Ullerich\", role=\"ctb\") )", + "Depends": [ + "R (>= 3.5.0)" + ], + "Description": "Package 'bit64' provides serializable S3 atomic 64bit (signed) integers. 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What if you want to put a vector of them in a data frame? 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Brazzale ", + "Note": "Maintainers are not available to give advice on using a package they did not author.", + "Description": "Functions and datasets for bootstrapping from the book \"Bootstrap Methods and Their Application\" by A. C. Davison and D. V. Hinkley (1997, CUP), originally written by Angelo Canty for S.", + "Title": "Bootstrap Functions", + "Depends": [ + "R (>= 3.0.0)", + "graphics", + "stats" + ], + "Suggests": [ + "MASS", + "survival" + ], + "LazyData": "yes", + "ByteCompile": "yes", + "License": "Unlimited", + "NeedsCompilation": "no", + "Author": "Angelo Canty [aut] (author of original code for S), Brian Ripley [aut, trl] (conversion to R, maintainer 1999--2022, author of parallel support), Alessandra R. Brazzale [ctb, cre] (minor bug fixes)", + "Repository": "CRAN" + }, + "brew": { + "Package": "brew", + "Version": "1.0-10", + "Source": "Repository", + "Type": "Package", + "Title": "Templating Framework for Report Generation", + "Authors@R": "c( person(\"Jeffrey\", \"Horner\", role = c(\"aut\", \"cph\")), person(\"Greg\", \"Hunt\", , \"greg@firmansyah.com\", role = c(\"aut\", \"cre\", \"cph\")) )", + "Description": "Implements a templating framework for mixing text and R code for report generation. brew template syntax is similar to PHP, Ruby's erb module, Java Server Pages, and Python's psp module.", + "License": "GPL (>= 2)", + "URL": "https://github.com/gregfrog/brew", + "BugReports": "https://github.com/gregfrog/brew/issues", + "Suggests": [ + "testthat (>= 3.0.0)" + ], + "Config/testthat/edition": "3", + "Encoding": "UTF-8", + "Repository": "CRAN", + "NeedsCompilation": "no", + "Author": "Jeffrey Horner [aut, cph], Greg Hunt [aut, cre, cph]", + "Maintainer": "Greg Hunt " + }, + "brio": { + "Package": "brio", + "Version": "1.1.5", + "Source": "Repository", + "Title": "Basic R Input Output", + "Authors@R": "c( person(\"Jim\", \"Hester\", role = \"aut\", comment = c(ORCID = \"0000-0002-2739-7082\")), person(\"G\u00e1bor\", \"Cs\u00e1rdi\", , \"csardi.gabor@gmail.com\", role = c(\"aut\", \"cre\")), person(given = \"Posit Software, PBC\", role = c(\"cph\", \"fnd\")) )", + "Description": "Functions to handle basic input output, these functions always read and write UTF-8 (8-bit Unicode Transformation Format) files and provide more explicit control over line endings.", + "License": "MIT + file LICENSE", + "URL": "https://brio.r-lib.org, https://github.com/r-lib/brio", + "BugReports": "https://github.com/r-lib/brio/issues", + "Depends": [ + "R (>= 3.6)" + ], + "Suggests": [ + "covr", + "testthat (>= 3.0.0)" + ], + "Config/Needs/website": "tidyverse/tidytemplate", + "Config/testthat/edition": "3", + "Encoding": "UTF-8", + "RoxygenNote": "7.2.3", + "NeedsCompilation": "yes", + "Author": "Jim Hester [aut] (), G\u00e1bor Cs\u00e1rdi [aut, cre], Posit Software, PBC [cph, fnd]", + "Maintainer": "G\u00e1bor Cs\u00e1rdi ", + "Repository": "CRAN" + }, + "broom": { + "Package": "broom", + "Version": "1.0.12", + "Source": "Repository", + "Type": "Package", + "Title": "Convert Statistical Objects into Tidy Tibbles", + "Authors@R": "c( person(\"David\", \"Robinson\", , \"admiral.david@gmail.com\", role = \"aut\"), person(\"Alex\", \"Hayes\", , \"alexpghayes@gmail.com\", role = \"aut\", comment = c(ORCID = \"0000-0002-4985-5160\")), person(\"Simon\", \"Couch\", , \"simon.couch@posit.co\", role = c(\"aut\"), comment = c(ORCID = \"0000-0001-5676-5107\")), person(\"Emil\", \"Hvitfeldt\", , \"emil.hvitfeldt@posit.co\", role = c(\"aut\", \"cre\"), comment = c(ORCID = \"0000-0002-0679-1945\")), person(\"Posit Software, PBC\", role = c(\"cph\", \"fnd\"), comment = c(ROR = \"03wc8by49\")), person(\"Indrajeet\", \"Patil\", , \"patilindrajeet.science@gmail.com\", role = 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\"ctb\"), person(\"Matt\", \"Lehman\", role = \"ctb\"), person(\"Bill\", \"Denney\", , \"wdenney@humanpredictions.com\", role = \"ctb\", comment = c(ORCID = \"0000-0002-5759-428X\")), person(\"Nic\", \"Crane\", role = \"ctb\"), person(\"Andrew\", \"Bates\", role = \"ctb\"), person(\"Vincent\", \"Arel-Bundock\", , \"vincent.arel-bundock@umontreal.ca\", role = \"ctb\", comment = c(ORCID = \"0000-0003-2042-7063\")), person(\"Hideaki\", \"Hayashi\", role = \"ctb\"), person(\"Luis\", \"Tobalina\", role = \"ctb\"), person(\"Annie\", \"Wang\", , \"anniewang.uc@gmail.com\", role = \"ctb\"), person(\"Wei Yang\", \"Tham\", , \"weiyang.tham@gmail.com\", role = \"ctb\"), person(\"Clara\", \"Wang\", , \"clara.wang.94@gmail.com\", role = \"ctb\"), person(\"Abby\", \"Smith\", , \"als1@u.northwestern.edu\", role = \"ctb\", comment = c(ORCID = \"0000-0002-3207-0375\")), person(\"Jasper\", \"Cooper\", , \"jaspercooper@gmail.com\", role = \"ctb\", comment = c(ORCID = \"0000-0002-8639-3188\")), person(\"E Auden\", \"Krauska\", , \"krauskae@gmail.com\", role = \"ctb\", comment = c(ORCID = \"0000-0002-1466-5850\")), person(\"Alex\", \"Wang\", , \"x249wang@uwaterloo.ca\", role = \"ctb\"), person(\"Malcolm\", \"Barrett\", , \"malcolmbarrett@gmail.com\", role = \"ctb\", comment = c(ORCID = \"0000-0003-0299-5825\")), person(\"Charles\", \"Gray\", , \"charlestigray@gmail.com\", role = \"ctb\", comment = c(ORCID = \"0000-0002-9978-011X\")), person(\"Jared\", \"Wilber\", role = \"ctb\"), person(\"Vilmantas\", \"Gegzna\", , \"GegznaV@gmail.com\", role = \"ctb\", comment = c(ORCID = \"0000-0002-9500-5167\")), person(\"Eduard\", \"Szoecs\", , \"eduardszoecs@gmail.com\", role = \"ctb\"), person(\"Frederik\", \"Aust\", , \"frederik.aust@uni-koeln.de\", role = \"ctb\", comment = c(ORCID = \"0000-0003-4900-788X\")), person(\"Angus\", \"Moore\", , \"angusmoore9@gmail.com\", role = \"ctb\"), person(\"Nick\", \"Williams\", , \"ntwilliams.personal@gmail.com\", role = \"ctb\"), person(\"Marius\", \"Barth\", , \"marius.barth.uni.koeln@gmail.com\", role = \"ctb\", comment = c(ORCID = \"0000-0002-3421-6665\")), person(\"Bruna\", \"Wundervald\", , \"brunadaviesw@gmail.com\", role = \"ctb\", comment = c(ORCID = \"0000-0001-8163-220X\")), person(\"Joyce\", \"Cahoon\", , \"joyceyu48@gmail.com\", role = \"ctb\", comment = c(ORCID = \"0000-0001-7217-4702\")), person(\"Grant\", \"McDermott\", , \"grantmcd@uoregon.edu\", role = \"ctb\", comment = c(ORCID = \"0000-0001-7883-8573\")), person(\"Kevin\", \"Zarca\", , \"kevin.zarca@gmail.com\", role = \"ctb\"), person(\"Shiro\", \"Kuriwaki\", , \"shirokuriwaki@gmail.com\", role = \"ctb\", comment = c(ORCID = \"0000-0002-5687-2647\")), person(\"Lukas\", \"Wallrich\", , \"lukas.wallrich@gmail.com\", role = \"ctb\", comment = c(ORCID = \"0000-0003-2121-5177\")), person(\"James\", \"Martherus\", , \"james@martherus.com\", role = \"ctb\", comment = c(ORCID = \"0000-0002-8285-3300\")), person(\"Chuliang\", \"Xiao\", , \"cxiao@umich.edu\", role = \"ctb\", comment = c(ORCID = \"0000-0002-8466-9398\")), person(\"Joseph\", \"Larmarange\", , \"joseph@larmarange.net\", role = \"ctb\"), person(\"Max\", \"Kuhn\", , \"max@posit.co\", role = \"ctb\"), person(\"Michal\", \"Bojanowski\", , \"michal2992@gmail.com\", role = \"ctb\"), person(\"Hakon\", \"Malmedal\", , \"hmalmedal@gmail.com\", role = \"ctb\"), person(\"Clara\", \"Wang\", role = \"ctb\"), person(\"Sergio\", \"Oller\", , \"sergioller@gmail.com\", role = \"ctb\"), person(\"Luke\", \"Sonnet\", , \"luke.sonnet@gmail.com\", role = \"ctb\"), person(\"Jim\", \"Hester\", , \"jim.hester@posit.co\", role = \"ctb\"), person(\"Ben\", \"Schneider\", , \"benjamin.julius.schneider@gmail.com\", role = \"ctb\"), person(\"Bernie\", \"Gray\", , \"bfgray3@gmail.com\", role = \"ctb\", comment = c(ORCID = \"0000-0001-9190-6032\")), person(\"Mara\", \"Averick\", , \"mara@posit.co\", role = \"ctb\"), person(\"Aaron\", \"Jacobs\", , \"atheriel@gmail.com\", role = \"ctb\"), person(\"Andreas\", \"Bender\", , 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\"Roger.Bivand@nhh.no\", role = \"ctb\"), person(\"Riinu\", \"Ots\", , \"riinuots@gmail.com\", role = \"ctb\"), person(\"Nicholas\", \"Williams\", , \"ntwilliams.personal@gmail.com\", role = \"ctb\"), person(\"Nina\", \"Jakobsen\", role = \"ctb\"), person(\"Michael\", \"Weylandt\", , \"michael.weylandt@gmail.com\", role = \"ctb\"), person(\"Lisa\", \"Lendway\", , \"llendway@macalester.edu\", role = \"ctb\"), person(\"Karl\", \"Hailperin\", , \"khailper@gmail.com\", role = \"ctb\"), person(\"Josue\", \"Rodriguez\", , \"jerrodriguez@ucdavis.edu\", role = \"ctb\"), person(\"Jenny\", \"Bryan\", , \"jenny@posit.co\", role = \"ctb\"), person(\"Chris\", \"Jarvis\", , \"Christopher1.jarvis@gmail.com\", role = \"ctb\"), person(\"Greg\", \"Macfarlane\", , \"gregmacfarlane@gmail.com\", role = \"ctb\"), person(\"Brian\", \"Mannakee\", , \"bmannakee@gmail.com\", role = \"ctb\"), person(\"Drew\", \"Tyre\", , \"atyre2@unl.edu\", role = \"ctb\"), person(\"Shreyas\", \"Singh\", , \"shreyas.singh.298@gmail.com\", role = \"ctb\"), person(\"Laurens\", \"Geffert\", , \"laurensgeffert@gmail.com\", role = \"ctb\"), person(\"Hong\", \"Ooi\", , \"hongooi@microsoft.com\", role = \"ctb\"), person(\"Henrik\", \"Bengtsson\", , \"henrikb@braju.com\", role = \"ctb\"), person(\"Eduard\", \"Szocs\", , \"eduardszoecs@gmail.com\", role = \"ctb\"), person(\"David\", \"Hugh-Jones\", , \"davidhughjones@gmail.com\", role = \"ctb\"), person(\"Matthieu\", \"Stigler\", , \"Matthieu.Stigler@gmail.com\", role = \"ctb\"), person(\"Hugo\", \"Tavares\", , \"hm533@cam.ac.uk\", role = \"ctb\", comment = c(ORCID = \"0000-0001-9373-2726\")), person(\"R. Willem\", \"Vervoort\", , \"Willemvervoort@gmail.com\", role = \"ctb\"), person(\"Brenton M.\", \"Wiernik\", , \"brenton@wiernik.org\", role = \"ctb\"), person(\"Josh\", \"Yamamoto\", , \"joshuayamamoto5@gmail.com\", role = \"ctb\"), person(\"Jasme\", \"Lee\", role = \"ctb\"), person(\"Taren\", \"Sanders\", , \"taren.sanders@acu.edu.au\", role = \"ctb\", comment = c(ORCID = \"0000-0002-4504-6008\")), person(\"Ilaria\", \"Prosdocimi\", , \"prosdocimi.ilaria@gmail.com\", role = \"ctb\", comment = c(ORCID = \"0000-0001-8565-094X\")), person(\"Daniel D.\", \"Sjoberg\", , \"danield.sjoberg@gmail.com\", role = \"ctb\", comment = c(ORCID = \"0000-0003-0862-2018\")), person(\"Alex\", \"Reinhart\", , \"areinhar@stat.cmu.edu\", role = \"ctb\", comment = c(ORCID = \"0000-0002-6658-514X\")) )", + "Description": "Summarizes key information about statistical objects in tidy tibbles. This makes it easy to report results, create plots and consistently work with large numbers of models at once. Broom provides three verbs that each provide different types of information about a model. tidy() summarizes information about model components such as coefficients of a regression. glance() reports information about an entire model, such as goodness of fit measures like AIC and BIC. augment() adds information about individual observations to a dataset, such as fitted values or influence measures.", + "License": "MIT + file LICENSE", + "URL": "https://broom.tidymodels.org/, https://github.com/tidymodels/broom", + "BugReports": "https://github.com/tidymodels/broom/issues", + "Depends": [ + "R (>= 4.1)" + ], + "Imports": [ + "backports", + "cli", + "dplyr (>= 1.0.0)", + "generics (>= 0.0.2)", + "glue", + "lifecycle", + "purrr", + "rlang (>= 1.1.0)", + "stringr", + "tibble (>= 3.0.0)", + "tidyr (>= 1.0.0)" + ], + "Suggests": [ + "AER", + "AUC", + "bbmle", + "betareg (>= 3.2-1)", + "biglm", + "binGroup", + "boot", + "btergm (>= 1.10.6)", + "car (>= 3.1-2)", + "carData", + "caret", + "cluster", + "cmprsk", + "coda", + "covr", + "drc", + "e1071", + "emmeans", + "epiR (>= 2.0.85)", + "ergm (>= 3.10.4)", + "fixest (>= 0.9.0)", + "gam (>= 1.15)", + "gee", + "geepack", + "ggplot2", + "glmnet", + "glmnetUtils", + "gmm", + "Hmisc", + "interp", + "irlba", + "joineRML", + "Kendall", + "knitr", + "ks", + "Lahman", + "lavaan (>= 0.6.18)", + "leaps", + "lfe", + "lm.beta", + "lme4", + "lmodel2", + "lmtest (>= 0.9.38)", + "lsmeans", + "maps", + "margins", + "MASS", + "mclust", + "mediation", + "metafor", + "mfx", + "mgcv", + "mlogit", + "modeldata", + "modeltests (>= 0.1.6)", + "muhaz", + "multcomp", + "network", + "nnet", + "ordinal", + "plm", + "poLCA", + "psych", + "quantreg", + "rmarkdown", + "robust", + "robustbase", + "rsample", + "sandwich", + "spatialreg", + "spdep (>= 1.1)", + "speedglm", + "spelling", + "stats4", + "survey", + "survival (>= 3.6-4)", + "systemfit", + "testthat (>= 3.0.0)", + "tseries", + "vars", + "zoo" + ], + "VignetteBuilder": "knitr", + "Config/Needs/website": "tidyverse/tidytemplate", + "Config/testthat/edition": "3", + "Config/usethis/last-upkeep": "2025-04-25", + "Encoding": "UTF-8", + "Language": "en-US", + "RoxygenNote": "7.3.3", + "Collate": "'aaa-documentation-helper.R' 'null-and-default.R' 'aer.R' 'auc.R' 'base.R' 'bbmle.R' 'betareg.R' 'biglm.R' 'bingroup.R' 'boot.R' 'broom-package.R' 'broom.R' 'btergm.R' 'car.R' 'caret.R' 'cluster.R' 'cmprsk.R' 'data-frame.R' 'deprecated-0-7-0.R' 'drc.R' 'emmeans.R' 'epiR.R' 'ergm.R' 'fixest.R' 'gam.R' 'geepack.R' 'glmnet-cv-glmnet.R' 'glmnet-glmnet.R' 'gmm.R' 'hmisc.R' 'import-standalone-obj-type.R' 'import-standalone-types-check.R' 'joinerml.R' 'kendall.R' 'ks.R' 'lavaan.R' 'leaps.R' 'lfe.R' 'list-irlba.R' 'list-optim.R' 'list-svd.R' 'list-xyz.R' 'list.R' 'lm-beta.R' 'lmodel2.R' 'lmtest.R' 'maps.R' 'margins.R' 'mass-fitdistr.R' 'mass-negbin.R' 'mass-polr.R' 'mass-ridgelm.R' 'stats-lm.R' 'mass-rlm.R' 'mclust.R' 'mediation.R' 'metafor.R' 'mfx.R' 'mgcv.R' 'mlogit.R' 'muhaz.R' 'multcomp.R' 'nnet.R' 'nobs.R' 'ordinal-clm.R' 'ordinal-clmm.R' 'plm.R' 'polca.R' 'psych.R' 'stats-nls.R' 'quantreg-nlrq.R' 'quantreg-rq.R' 'quantreg-rqs.R' 'robust-glmrob.R' 'robust-lmrob.R' 'robustbase-glmrob.R' 'robustbase-lmrob.R' 'sp.R' 'spdep.R' 'speedglm-speedglm.R' 'speedglm-speedlm.R' 'stats-anova.R' 'stats-arima.R' 'stats-decompose.R' 'stats-factanal.R' 'stats-glm.R' 'stats-htest.R' 'stats-kmeans.R' 'stats-loess.R' 'stats-mlm.R' 'stats-prcomp.R' 'stats-smooth.spline.R' 'stats-summary-lm.R' 'stats-time-series.R' 'survey.R' 'survival-aareg.R' 'survival-cch.R' 'survival-coxph.R' 'survival-pyears.R' 'survival-survdiff.R' 'survival-survexp.R' 'survival-survfit.R' 'survival-survreg.R' 'systemfit.R' 'tseries.R' 'utilities.R' 'vars.R' 'zoo.R' 'zzz.R'", + "NeedsCompilation": "no", + "Author": "David Robinson [aut], Alex Hayes [aut] (ORCID: ), Simon Couch [aut] (ORCID: ), Emil Hvitfeldt [aut, cre] (ORCID: ), Posit Software, PBC [cph, fnd] (ROR: ), Indrajeet Patil [ctb] (ORCID: ), Derek Chiu [ctb], Matthieu Gomez [ctb], Boris Demeshev [ctb], Dieter Menne [ctb], Benjamin Nutter [ctb], Luke Johnston [ctb], Ben Bolker [ctb], Francois Briatte [ctb], Jeffrey Arnold [ctb], Jonah Gabry [ctb], Luciano Selzer [ctb], Gavin Simpson [ctb], Jens Preussner [ctb], Jay Hesselberth [ctb], Hadley Wickham [ctb], Matthew Lincoln [ctb], Alessandro Gasparini [ctb], Lukasz Komsta [ctb], Frederick Novometsky [ctb], Wilson Freitas [ctb], Michelle Evans [ctb], Jason Cory Brunson [ctb], Simon Jackson [ctb], Ben Whalley [ctb], Karissa Whiting [ctb], Yves Rosseel [ctb], Michael Kuehn [ctb], Jorge Cimentada [ctb], Erle Holgersen [ctb], Karl Dunkle Werner [ctb] (ORCID: ), Ethan Christensen [ctb], Steven Pav [ctb], Paul PJ [ctb], Ben Schneider [ctb], Patrick Kennedy [ctb], Lily Medina [ctb], Brian Fannin [ctb], Jason Muhlenkamp [ctb], Matt Lehman [ctb], Bill Denney [ctb] (ORCID: ), Nic Crane [ctb], Andrew Bates [ctb], Vincent Arel-Bundock [ctb] (ORCID: ), Hideaki Hayashi [ctb], Luis Tobalina [ctb], 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(2020, Journal of Statistical Software, ).", + "Depends": [ + "R (>= 3.0.0)", + "methods" + ], + "Imports": [ + "graphics", + "grDevices", + "stats" + ], + "Suggests": [ + "datasets", + "utils", + "KernSmooth", + "MASS", + "kernlab", + "mvtnorm", + "vcd", + "tcltk", + "shiny", + "shinyjs", + "ggplot2", + "dplyr", + "scales", + "grid", + "png", + "jpeg", + "knitr", + "rmarkdown", + "RColorBrewer", + "rcartocolor", + "scico", + "viridis", + "wesanderson" + ], + "VignetteBuilder": "knitr", + "License": "BSD_3_clause + file LICENSE", + "URL": "https://colorspace.R-Forge.R-project.org/, https://hclwizard.org/", + "BugReports": "https://colorspace.R-Forge.R-project.org/contact.html", + "LazyData": "yes", + "Encoding": "UTF-8", + "RoxygenNote": "7.3.2", + "NeedsCompilation": "yes", + "Author": "Ross Ihaka [aut], Paul Murrell [aut] (ORCID: ), Kurt Hornik [aut] (ORCID: ), Jason C. Fisher [aut] (ORCID: ), Reto Stauffer [aut] (ORCID: ), Claus O. Wilke [aut] (ORCID: ), Claire D. 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You provide the data, tell 'ggplot2' how to map variables to aesthetics, what graphical primitives to use, and it takes care of the details.", + "License": "MIT + file LICENSE", + "URL": "https://ggplot2.tidyverse.org, https://github.com/tidyverse/ggplot2", + "BugReports": "https://github.com/tidyverse/ggplot2/issues", + "Depends": [ + "R (>= 4.1)" + ], + "Imports": [ + "cli", + "grDevices", + "grid", + "gtable (>= 0.3.6)", + "isoband", + "lifecycle (> 1.0.1)", + "rlang (>= 1.1.0)", + "S7", + "scales (>= 1.4.0)", + "stats", + "vctrs (>= 0.6.0)", + "withr (>= 2.5.0)" + ], + "Suggests": [ + "broom", + "covr", + "dplyr", + "ggplot2movies", + "hexbin", + "Hmisc", + "hms", + "knitr", + "mapproj", + "maps", + "MASS", + "mgcv", + "multcomp", + "munsell", + "nlme", + "profvis", + "quantreg", + "quarto", + "ragg (>= 1.2.6)", + "RColorBrewer", + "roxygen2", + "rpart", + "sf (>= 0.7-3)", + "svglite (>= 2.1.2)", + "testthat (>= 3.1.5)", + "tibble", + "vdiffr (>= 1.0.6)", + "xml2" + ], + 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Yutani [aut] (ORCID: ), Dewey Dunnington [aut] (ORCID: ), Teun van den Brand [aut] (ORCID: ), Posit, PBC [cph, fnd] (ROR: )", + "Maintainer": "Thomas Lin Pedersen ", + "Repository": "CRAN" + }, + "ggpubr": { + "Package": "ggpubr", + "Version": "0.6.3", + "Source": "Repository", + "Type": "Package", + "Title": "'ggplot2' Based Publication Ready Plots", + "Authors@R": "c( person(\"Alboukadel\", \"Kassambara\", role = c(\"aut\", \"cre\"), email = \"alboukadel.kassambara@gmail.com\"), person(\"Laszlo\", \"Erdey\", role = \"ctb\", email = \"erdey.laszlo@econ.unideb.hu\", comment = \"Faculty of Economics and Business, University of Debrecen, Hungary\"))", + "Description": "The 'ggplot2' package is excellent and flexible for elegant data visualization in R. However the default generated plots requires some formatting before we can send them for publication. Furthermore, to customize a 'ggplot', the syntax is opaque and this raises the level of difficulty for researchers with no advanced R programming skills. 'ggpubr' provides some easy-to-use functions for creating and customizing 'ggplot2'- based publication ready plots.", + "License": "GPL (>= 2)", + "LazyData": "TRUE", + "Encoding": "UTF-8", + "Depends": [ + "R (>= 4.1.0)", + "ggplot2 (>= 3.5.2)" + ], + "Imports": [ + "ggrepel (>= 0.9.2)", + "grid", + "ggsci", + "stats", + "utils", + "tidyr (>= 1.3.0)", + "purrr", + "dplyr (>= 1.1.0)", + "cowplot (>= 1.1.1)", + "ggsignif", + "scales", + "gridExtra", + "glue", + "polynom", + "rlang (>= 0.4.6)", + "rstatix (>= 0.7.2)", + "tibble", + "magrittr" + ], + "Suggests": [ + "grDevices", + "knitr", + "RColorBrewer", + "gtable", + "testthat" + ], + "URL": "https://rpkgs.datanovia.com/ggpubr/", + "BugReports": "https://github.com/kassambara/ggpubr/issues", + "RoxygenNote": "7.3.3", + "Collate": "'utilities_color.R' 'utilities_base.R' 'desc_statby.R' 'utilities.R' 'add_summary.R' 'annotate_figure.R' 'as_ggplot.R' 'as_npc.R' 'axis_scale.R' 'background_image.R' 'bgcolor.R' 'border.R' 'compare_means.R' 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"The grammar of graphics as implemented in ggplot2 is a poor fit for graph and network visualizations due to its reliance on tabular data input. ggraph is an extension of the ggplot2 API tailored to graph visualizations and provides the same flexible approach to building up plots layer by layer.", + "License": "MIT + file LICENSE", + "Encoding": "UTF-8", + "LazyData": "TRUE", + "Imports": [ + "dplyr", + "ggforce (>= 0.3.1)", + "grid", + "igraph (>= 1.0.0)", + "scales", + "MASS", + "ggrepel", + "utils", + "stats", + "viridis", + "rlang", + "tidygraph", + "graphlayouts (>= 1.1.0)", + "withr", + "cli", + "vctrs", + "lifecycle", + "memoise" + ], + "Suggests": [ + "network", + "knitr", + "rmarkdown", + "purrr", + "tibble", + "seriation", + "deldir", + "gganimate", + "covr", + "sf", + "sfnetworks" + ], + "LinkingTo": [ + "cpp11" + ], + "RoxygenNote": "7.3.2", + "Depends": [ + "R (>= 2.10)", + "ggplot2 (>= 3.5.0)" + ], + "VignetteBuilder": "knitr", + "URL": "https://ggraph.data-imaginist.com, 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This package provides an easy way to indicate if two groups are significantly different. Commonly this is shown by a bracket on top connecting the groups of interest which itself is annotated with the level of significance (NS, *, **, ***). 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The \"v4\" refers to the fact that the Sheets API is currently at version 4. This package can read and write both the metadata and the cell data in a Sheet.", + "License": "MIT + file LICENSE", + "URL": "https://googlesheets4.tidyverse.org, https://github.com/tidyverse/googlesheets4", + "BugReports": "https://github.com/tidyverse/googlesheets4/issues", + "Depends": [ + "R (>= 3.6)" + ], + "Imports": [ + "cellranger", + "cli (>= 3.0.0)", + "curl", + "gargle (>= 1.6.0)", + "glue (>= 1.3.0)", + "googledrive (>= 2.1.0)", + "httr", + "ids", + "lifecycle", + "magrittr", + "methods", + "purrr", + "rematch2", + "rlang (>= 1.0.2)", + "tibble (>= 2.1.1)", + "utils", + "vctrs (>= 0.2.3)", + "withr" + ], + "Suggests": [ + "readr", + "rmarkdown", + "spelling", + "testthat (>= 3.1.7)" + ], + "ByteCompile": "true", + "Config/Needs/website": "tidyverse, tidyverse/tidytemplate", + "Config/testthat/edition": "3", + "Encoding": "UTF-8", + "Language": "en-US", + "RoxygenNote": "7.3.2.9000", + "NeedsCompilation": "no", + "Author": "Jennifer Bryan [cre, aut] (ORCID: ), Posit Software, PBC [cph, fnd]", + "Maintainer": "Jennifer Bryan ", + "Repository": "CRAN" + }, + "graphlayouts": { + "Package": "graphlayouts", + "Version": "1.2.3", + "Source": "Repository", + "Title": "Additional Layout Algorithms for Network Visualizations", + "Authors@R": "person(\"David\", \"Schoch\", email = \"david@schochastics.net\", role = c(\"aut\", \"cre\"), comment = c(ORCID = \"0000-0003-2952-4812\"))", + "Description": "Several new layout algorithms to visualize networks are provided which are not part of 'igraph'. Most are based on the concept of stress majorization by Gansner et al. (2004) . Some more specific algorithms allow the user to emphasize hidden group structures in networks or focus on specific nodes.", + "URL": "https://github.com/schochastics/graphlayouts, https://schochastics.github.io/graphlayouts/", + "BugReports": "https://github.com/schochastics/graphlayouts/issues", + "Depends": [ + "R (>= 3.6.0)" + ], + "License": "MIT + file LICENSE", + "Encoding": "UTF-8", + "LazyData": "true", + "Imports": [ + "igraph (>= 2.0.0)", + "Rcpp" + ], + "Suggests": [ + "testthat", + "ggplot2", + "uwot", + "oaqc" + ], + "LinkingTo": [ + "Rcpp", + "RcppArmadillo" + ], + "RoxygenNote": "7.3.2", + "NeedsCompilation": "yes", + "Author": "David Schoch [aut, cre] (ORCID: )", + "Maintainer": "David Schoch ", + "Repository": "CRAN" + }, + "gridExtra": { + "Package": "gridExtra", + "Version": "2.3", + "Source": "Repository", + "Authors@R": "c(person(\"Baptiste\", \"Auguie\", email = \"baptiste.auguie@gmail.com\", role = c(\"aut\", \"cre\")), person(\"Anton\", \"Antonov\", email = \"tonytonov@gmail.com\", role = c(\"ctb\")))", + "License": "GPL (>= 2)", + "Title": "Miscellaneous Functions for \"Grid\" Graphics", + "Type": "Package", + "Description": "Provides a number of user-level functions to work with \"grid\" graphics, notably to arrange multiple grid-based plots on a page, and draw tables.", + "VignetteBuilder": "knitr", + "Imports": [ + "gtable", + "grid", + "grDevices", + "graphics", + "utils" + ], + "Suggests": [ + "ggplot2", + "egg", + "lattice", + "knitr", + "testthat" + ], + "RoxygenNote": "6.0.1", + "NeedsCompilation": "no", + "Author": "Baptiste Auguie [aut, cre], Anton Antonov [ctb]", + "Maintainer": "Baptiste Auguie ", + "Repository": "CRAN" + }, + "gridtext": { + "Package": "gridtext", + "Version": "0.1.6", + "Source": "Repository", + "Type": "Package", + "Title": "Improved Text Rendering Support for 'Grid' Graphics", + "Authors@R": "c( person( given = \"Claus O.\", family = \"Wilke\", role = c(\"aut\"), email = \"wilke@austin.utexas.edu\", comment = c(ORCID = \"0000-0002-7470-9261\") ), person( given = \"Brenton M.\", family = \"Wiernik\", role = c(\"aut\", \"cre\"), email = \"brenton@wiernik.org\", comment = c(ORCID = \"0000-0001-9560-6336\", Twitter = \"@bmwiernik\") ) )", + "Description": "Provides support for rendering of formatted text using 'grid' graphics. Text can be formatted via a minimal subset of 'Markdown', 'HTML', and inline 'CSS' directives, and it can be rendered both with and without word wrap.", + "URL": "https://wilkelab.org/gridtext/", + "BugReports": "https://github.com/wilkelab/gridtext/issues", + "License": "MIT + file LICENSE", + "Depends": [ + "R (>= 3.5)" + ], + "Imports": [ + "curl", + "grid", + "grDevices", + "markdown", + "rlang", + "Rcpp", + "png", + "jpeg", + "stringr", + "xml2" + ], + "Suggests": [ + "covr", + "knitr", + "rmarkdown", + "testthat", + "vdiffr" + ], + "LinkingTo": [ + "Rcpp" + ], + "Encoding": "UTF-8", + "RoxygenNote": "7.1.1", + "NeedsCompilation": "yes", + "Author": "Claus O. Wilke [aut] (ORCID: ), Brenton M. Wiernik [aut, cre] (ORCID: , Twitter: @bmwiernik)", + "Maintainer": "Brenton M. 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With its progressive approach, we can construct display tables with a cohesive set of table parts. Table values can be formatted using any of the included formatting functions. Footnotes and cell styles can be precisely added through a location targeting system. The way in which 'gt' handles things for you means that you don't often have to worry about the fine details.", + "License": "MIT + file LICENSE", + "URL": "https://gt.rstudio.com, https://github.com/rstudio/gt", + "BugReports": "https://github.com/rstudio/gt/issues", + "Depends": [ + "R (>= 4.1.0)" + ], + "Imports": [ + "base64enc (>= 0.1-3)", + "bigD (>= 0.2)", + "bitops (>= 1.0-7)", + "cli (>= 3.6.3)", + "commonmark (>= 1.9.1)", + "dplyr (>= 1.1.4)", + "fs (>= 1.6.4)", + "glue (>= 1.8.0)", + "htmltools (>= 0.5.8.1)", + "htmlwidgets (>= 1.6.4)", + "juicyjuice (>= 0.1.0)", + "magrittr (>= 2.0.3)", + "markdown (>= 1.13)", + "reactable (>= 0.4.4)", + "rlang (>= 1.1.4)", + "sass (>= 0.4.9)", + "scales (>= 1.3.0)", + "tidyselect (>= 1.2.1)", + "vctrs", + "xml2 (>= 1.3.6)" + ], + "Suggests": [ + "bit64", + "farver", + "fontawesome (>= 0.5.2)", + "ggplot2", + "grid", + "gtable (>= 0.3.6)", + "katex (>= 1.4.1)", + "knitr", + "lubridate", + "magick", + "paletteer", + "RColorBrewer", + "rmarkdown (>= 2.20)", + "rsvg", + "rvest", + "shiny (>= 1.9.1)", + "testthat (>= 3.1.9)", + "tidyr (>= 1.0.0)", + "webshot2 (>= 0.1.0)", + "withr" + ], + "Config/Needs/coverage": "officer", + "Config/Needs/website": "quarto", + "ByteCompile": "true", + "Config/testthat/edition": "3", + "Config/testthat/parallel": "true", + "Encoding": "UTF-8", + "LazyData": "true", + "RoxygenNote": "7.3.3", + "NeedsCompilation": "no", + "Author": "Richard Iannone [aut, cre] (ORCID: ), Joe Cheng [aut], Barret Schloerke [aut] (ORCID: ), Shannon Haughton [aut], Ellis Hughes [aut] (ORCID: ), Alexandra Lauer [aut] (ORCID: ), Romain Fran\u00e7ois [aut], JooYoung Seo [aut] (ORCID: ), Ken Brevoort [aut] (ORCID: ), Olivier Roy [aut], Posit Software, PBC [cph, fnd]", + "Maintainer": "Richard Iannone ", + "Repository": "CRAN" + }, + "gtable": { + "Package": "gtable", + "Version": "0.3.6", + "Source": "Repository", + "Title": "Arrange 'Grobs' in Tables", + "Authors@R": "c( person(\"Hadley\", \"Wickham\", , \"hadley@posit.co\", role = \"aut\"), person(\"Thomas Lin\", \"Pedersen\", , \"thomas.pedersen@posit.co\", role = c(\"aut\", \"cre\")), person(\"Posit Software, PBC\", role = c(\"cph\", \"fnd\")) )", + "Description": "Tools to make it easier to work with \"tables\" of 'grobs'. The 'gtable' package defines a 'gtable' grob class that specifies a grid along with a list of grobs and their placement in the grid. Further the package makes it easy to manipulate and combine 'gtable' objects so that complex compositions can be built up sequentially.", + "License": "MIT + file LICENSE", + "URL": "https://gtable.r-lib.org, https://github.com/r-lib/gtable", + "BugReports": "https://github.com/r-lib/gtable/issues", + "Depends": [ + "R (>= 4.0)" + ], + "Imports": [ + "cli", + "glue", + "grid", + "lifecycle", + "rlang (>= 1.1.0)", + "stats" + ], + "Suggests": [ + "covr", + "ggplot2", + "knitr", + "profvis", + "rmarkdown", + "testthat (>= 3.0.0)" + ], + "VignetteBuilder": "knitr", + "Config/Needs/website": "tidyverse/tidytemplate", + "Config/testthat/edition": "3", + "Config/usethis/last-upkeep": "2024-10-25", + "Encoding": "UTF-8", + "RoxygenNote": "7.3.2", + "NeedsCompilation": "no", + "Author": "Hadley Wickham [aut], Thomas Lin Pedersen [aut, cre], Posit Software, PBC [cph, fnd]", + "Maintainer": "Thomas Lin Pedersen ", + "Repository": "CRAN" + }, + "gtsummary": { + "Package": "gtsummary", + "Version": "2.5.0.9004", + "Source": "GitHub", + "Title": "Presentation-Ready Data Summary and Analytic Result Tables", + "Authors@R": "c( person(\"Daniel D.\", \"Sjoberg\", , \"danield.sjoberg@gmail.com\", role = c(\"aut\", \"cre\"), comment = c(ORCID = \"0000-0003-0862-2018\")), person(\"Joseph\", \"Larmarange\", role = \"aut\", comment = c(ORCID = \"0000-0001-7097-700X\")), person(\"Michael\", \"Curry\", role = \"aut\", comment = c(ORCID = \"0000-0002-0261-4044\")), person(\"Emily\", \"de la Rua\", , role = \"aut\", comment = c(ORCID = \"0009-0000-8738-5561\")), person(\"Jessica\", \"Lavery\", role = \"aut\", comment = c(ORCID = \"0000-0002-2746-5647\")), person(\"Karissa\", \"Whiting\", role = \"aut\", comment = c(ORCID = \"0000-0002-4683-1868\")), person(\"Emily C.\", \"Zabor\", role = \"aut\", comment = c(ORCID = \"0000-0002-1402-4498\")), person(\"Xing\", \"Bai\", role = \"ctb\"), person(\"Malcolm\", \"Barrett\", role = \"ctb\", comment = c(ORCID = \"0000-0003-0299-5825\")), person(\"Esther\", \"Drill\", role = \"ctb\", comment = c(ORCID = \"0000-0002-3315-4538\")), person(\"Jessica\", \"Flynn\", role = \"ctb\", comment = c(ORCID = \"0000-0001-8310-6684\")), person(\"Margie\", \"Hannum\", role = \"ctb\", comment = c(ORCID = \"0000-0002-2953-0449\")), person(\"Stephanie\", \"Lobaugh\", role = \"ctb\"), person(\"Shannon\", \"Pileggi\", role = \"ctb\", comment = c(ORCID = \"0000-0002-7732-4164\")), person(\"Amy\", \"Tin\", role = \"ctb\", comment = c(ORCID = \"0000-0002-8005-0694\")), person(\"Gustavo\", \"Zapata Wainberg\", role = \"ctb\", comment = c(ORCID = \"0000-0002-2524-3637\")) )", + "Description": "Creates presentation-ready tables summarizing data sets, regression models, and more. The code to create the tables is concise and highly customizable. Data frames can be summarized with any function, e.g. mean(), median(), even user-written functions. Regression models are summarized and include the reference rows for categorical variables. Common regression models, such as logistic regression and Cox proportional hazards regression, are automatically identified and the tables are pre-filled with appropriate column headers.", + "License": "MIT + file LICENSE", + "URL": "https://github.com/ddsjoberg/gtsummary, https://www.danieldsjoberg.com/gtsummary/", + "BugReports": "https://github.com/ddsjoberg/gtsummary/issues", + "Depends": [ + "R (>= 4.2)" + ], + "Imports": [ + "cards (>= 0.7.1.9008)", + "cardx (>= 0.3.2.9000)", + "cli (>= 3.6.3)", + "dplyr (>= 1.1.3)", + "glue (>= 1.8.0)", + "gt (>= 0.11.1)", + "lifecycle (>= 1.0.3)", + "rlang (>= 1.1.1)", + "tidyr (>= 1.3.0)", + "vctrs (>= 0.6.4)" + ], + "Suggests": [ + "aod (>= 1.3.3)", + "broom (>= 1.0.5)", + "broom.helpers (>= 1.20.0)", + "broom.mixed (>= 0.2.9)", + "car (>= 3.0-11)", + "cmprsk", + "effectsize (>= 0.6.0)", + "emmeans (>= 1.7.3)", + "flextable (>= 0.8.1)", + "geepack (>= 1.3.10)", + "ggstats (>= 0.2.1)", + "huxtable (>= 5.4.0)", + "insight (>= 0.15.0)", + "kableExtra (>= 1.3.4)", + "knitr (>= 1.37)", + "lme4 (>= 1.1-31)", + "mice (>= 3.10.0)", + "nnet", + "officer", + "openxlsx", + "parameters (>= 0.20.2)", + "parsnip (>= 0.1.7)", + "rmarkdown", + "smd (>= 0.6.6)", + "spelling", + "survey (>= 4.2)", + "survival (>= 3.6-4)", + "testthat (>= 3.2.0)", + "withr (>= 2.5.0)", + "workflows (>= 0.2.4)" + ], + "VignetteBuilder": "knitr", + "Config/Needs/check": "hms", + "Config/Needs/website": "forcats, sandwich, scales", + "Config/testthat/edition": "3", + "Config/testthat/parallel": "true", + "Encoding": "UTF-8", + "Language": "en-US", + "LazyData": "true", + "Roxygen": "list(markdown = TRUE)", + "RoxygenNote": "7.3.3", + "Author": "Daniel D. 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It is primarily intended as a building block for other packages, rather than making it particularly easy to create complete web applications using httpuv alone. httpuv is built on top of the libuv and http-parser C libraries, both of which were developed by Joyent, Inc. (See LICENSE file for libuv and http-parser license information.)", + "License": "GPL (>= 2) | file LICENSE", + "URL": "https://rstudio.github.io/httpuv/, https://github.com/rstudio/httpuv", + "BugReports": "https://github.com/rstudio/httpuv/issues", + "Depends": [ + "R (>= 2.15.1)" + ], + "Imports": [ + "later (>= 0.8.0)", + "promises", + "R6", + "Rcpp (>= 1.0.7)", + "utils" + ], + "Suggests": [ + "callr", + "curl", + "jsonlite", + "testthat (>= 3.0.0)", + "websocket" + ], + "LinkingTo": [ + "later", + "Rcpp" + ], + "Config/Needs/website": "tidyverse/tidytemplate", + "Config/testthat/edition": "3", + "Config/usethis/last-upkeep": "2025-07-01", + "Encoding": "UTF-8", + "RoxygenNote": "7.3.3", + "SystemRequirements": "GNU make, zlib", + "Collate": "'RcppExports.R' 'httpuv-package.R' 'httpuv.R' 'random_port.R' 'server.R' 'staticServer.R' 'static_paths.R' 'utils.R'", + "NeedsCompilation": "yes", + "Author": "Joe Cheng [aut], Winston Chang [aut, cre], Posit, PBC [cph, fnd] (ROR: ), Hector Corrada Bravo [ctb], Jeroen Ooms [ctb], Andrzej Krzemienski [cph] (optional.hpp), libuv project contributors [cph] (libuv library, see src/libuv/AUTHORS file), Joyent, Inc. and other Node contributors [cph] (libuv library, see src/libuv/AUTHORS file; and http-parser library, see src/http-parser/AUTHORS file), Niels Provos [cph] (libuv subcomponent: tree.h), Internet Systems Consortium, Inc. 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Configuration functions make it easy to control additional request components (authenticate(), add_headers() and so on).", + "License": "MIT + file LICENSE", + "URL": "https://httr.r-lib.org/, https://github.com/r-lib/httr", + "BugReports": "https://github.com/r-lib/httr/issues", + "Depends": [ + "R (>= 3.6)" + ], + "Imports": [ + "curl (>= 5.1.0)", + "jsonlite", + "mime", + "openssl (>= 0.8)", + "R6" + ], + "Suggests": [ + "covr", + "httpuv", + "jpeg", + "knitr", + "png", + "readr", + "rmarkdown", + "testthat (>= 0.8.0)", + "xml2" + ], + "VignetteBuilder": "knitr", + "Config/Needs/website": "tidyverse/tidytemplate", + "Encoding": "UTF-8", + "RoxygenNote": "7.3.3", + "NeedsCompilation": "no", + "Author": "Hadley Wickham [aut, cre], Posit Software, PBC [cph, fnd]", + "Maintainer": "Hadley Wickham ", + "Repository": "CRAN" + }, + "httr2": { + "Package": "httr2", + "Version": "1.2.2", + "Source": "Repository", + "Title": "Perform HTTP Requests and Process the Responses", + "Authors@R": "c( person(\"Hadley\", \"Wickham\", , \"hadley@posit.co\", role = c(\"aut\", \"cre\")), person(\"Posit Software, PBC\", role = c(\"cph\", \"fnd\")), person(\"Maximilian\", \"Girlich\", role = \"ctb\") )", + "Description": "Tools for creating and modifying HTTP requests, then performing them and processing the results. 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The package can analyze or check individual words as well as parse text, latex, html or xml documents. For a more user-friendly interface use the 'spelling' package which builds on this package to automate checking of files, documentation and vignettes in all common formats.", + "License": "GPL-2 | LGPL-2.1 | MPL-1.1", + "URL": "https://docs.ropensci.org/hunspell/ https://ropensci.r-universe.dev/hunspell", + "BugReports": "https://github.com/ropensci/hunspell/issues", + "Imports": [ + "Rcpp", + "digest" + ], + "LinkingTo": [ + "Rcpp (>= 0.12.12)" + ], + "Suggests": [ + "spelling", + "testthat", + "knitr", + "rmarkdown" + ], + "VignetteBuilder": "knitr", + "RoxygenNote": "7.2.3", + "Language": "en-US", + "NeedsCompilation": "yes", + "Author": "Jeroen Ooms [aut, cre], Authors of libhunspell [cph] (see AUTHORS file)", + "Maintainer": "Jeroen Ooms ", + "Repository": "CRAN" + }, + "ids": { + "Package": "ids", + "Version": "1.0.1", + "Source": "Repository", + "Title": "Generate Random Identifiers", + "Authors@R": "person(\"Rich\", \"FitzJohn\", role = c(\"aut\", \"cre\"), email = \"rich.fitzjohn@gmail.com\")", + "Description": "Generate random or human readable and pronounceable identifiers.", + "License": "MIT + file LICENSE", + "URL": "https://github.com/richfitz/ids", + "BugReports": "https://github.com/richfitz/ids/issues", + "Imports": [ + "openssl", + "uuid" + ], + "Suggests": [ + "knitr", + "rcorpora", + "rmarkdown", + "testthat" + ], + "RoxygenNote": "6.0.1", + "VignetteBuilder": "knitr", + "NeedsCompilation": "no", + "Author": "Rich FitzJohn [aut, cre]", + "Maintainer": "Rich FitzJohn ", + "Repository": "CRAN" + }, + "igraph": { + "Package": "igraph", + "Version": "2.3.0", + "Source": "Repository", + "Title": "Network Analysis and Visualization", + "Authors@R": "c( person(\"G\u00e1bor\", \"Cs\u00e1rdi\", , \"csardi.gabor@gmail.com\", role = \"aut\", comment = c(ORCID = \"0000-0001-7098-9676\")), person(\"Tam\u00e1s\", \"Nepusz\", , \"ntamas@gmail.com\", role = \"aut\", comment = c(ORCID = \"0000-0002-1451-338X\")), person(\"Vincent\", \"Traag\", role = \"aut\", comment = c(ORCID = \"0000-0003-3170-3879\")), person(\"Szabolcs\", \"Horv\u00e1t\", , \"szhorvat@gmail.com\", role = \"aut\", comment = c(ORCID = \"0000-0002-3100-523X\")), person(\"Fabio\", \"Zanini\", , \"fabio.zanini@unsw.edu.au\", role = \"aut\", comment = c(ORCID = \"0000-0001-7097-8539\")), person(\"Daniel\", \"Noom\", role = \"aut\"), person(\"Kirill\", \"M\u00fcller\", , \"kirill@cynkra.com\", role = c(\"aut\", \"cre\"), comment = c(ORCID = \"0000-0002-1416-3412\")), person(\"Michael\", \"Antonov\", role = \"ctb\"), person(\"Chan Zuckerberg Initiative\", role = \"fnd\", comment = c(ROR = \"02qenvm24\")), person(\"David\", \"Schoch\", , \"david.schoch@cynkra.com\", role = \"aut\", comment = c(ORCID = \"0000-0003-2952-4812\")), person(\"Ma\u00eblle\", \"Salmon\", , \"maelle@cynkra.com\", role = \"aut\", comment = c(ORCID = \"0000-0002-2815-0399\")), person(\"R Consortium\", role = \"fnd\", comment = c(ROR = \"01z833950\")) )", + "Description": "Routines for simple graphs and network analysis. It can handle large graphs very well and provides functions for generating random and regular graphs, graph visualization, centrality methods and much more.", + "License": "GPL (>= 2)", + "URL": "https://r.igraph.org/, https://igraph.org/, https://igraph.discourse.group/", + "BugReports": "https://github.com/igraph/rigraph/issues", + "Depends": [ + "methods", + "R (>= 3.5.0)" + ], + "Imports": [ + "cli", + "graphics", + "grDevices", + "lifecycle", + "magrittr", + "Matrix", + "pkgconfig (>= 2.0.0)", + "rlang (>= 1.1.0)", + "stats", + "utils", + "vctrs" + ], + "Suggests": [ + "ape (>= 5.7-0.1)", + "callr", + "decor", + "digest", + "igraphdata", + "knitr", + "rgl (>= 1.3.14)", + "rmarkdown", + "scales", + "stats4", + "tcltk", + "testthat", + "vdiffr", + "withr" + ], + "Enhances": [ + "graph" + ], + "LinkingTo": [ + "cpp11 (>= 0.5.0)" + ], + "VignetteBuilder": "knitr", + "Config/build/compilation-database": "false", + "Config/build/never-clean": "true", + "Config/comment/compilation-database": "Generate manually with pkgload:::generate_db() for faster pkgload::load_all()", + "Config/Needs/build": "devtools, irlba, pkgconfig", + "Config/Needs/coverage": "covr", + "Config/Needs/roxygen2": "r-lib/roxygen2, igraph/igraph.r2cdocs, moodymudskipper/devtag", + "Config/Needs/website": "here, readr, tibble, xmlparsedata, xml2", + "Config/testthat/edition": "3", + "Config/testthat/parallel": "true", + "Config/testthat/start-first": "aaa-auto, vs-es, scan, vs-operators, weakref, watts.strogatz.game", + "Encoding": "UTF-8", + "RoxygenNote": "7.3.3.9000", + "SystemRequirements": "libxml2 (optional), glpk (>= 4.57, optional)", + "NeedsCompilation": "yes", + "Author": "G\u00e1bor Cs\u00e1rdi [aut] (ORCID: ), Tam\u00e1s Nepusz [aut] (ORCID: ), Vincent Traag [aut] (ORCID: ), Szabolcs Horv\u00e1t [aut] (ORCID: ), Fabio Zanini [aut] (ORCID: ), Daniel Noom [aut], Kirill M\u00fcller [aut, cre] (ORCID: ), Michael Antonov [ctb], Chan Zuckerberg Initiative [fnd] (ROR: ), David Schoch [aut] (ORCID: ), Ma\u00eblle Salmon [aut] (ORCID: ), R Consortium [fnd] (ROR: )", + "Maintainer": "Kirill M\u00fcller ", + "Repository": "CRAN" + }, + "ini": { + "Package": "ini", + "Version": "0.3.1", + "Source": "Repository", + "Type": "Package", + "Title": "Read and Write '.ini' Files", + "Date": "2018-05-19", + "Author": "David Valentim Dias", + "Maintainer": "David Valentim Dias ", + "Description": "Parse simple '.ini' configuration files to an structured list. Users can manipulate this resulting list with lapply() functions. This same structured list can be used to write back to file after modifications.", + "License": "GPL-3", + "URL": "https://github.com/dvdscripter/ini", + "BugReports": "https://github.com/dvdscripter/ini/issues", + "LazyData": "FALSE", + "RoxygenNote": "6.0.1", + "Suggests": [ + "testthat" + ], + "NeedsCompilation": "no", + "Repository": "CRAN" + }, + "insight": { + "Package": "insight", + "Version": "1.5.0", + "Source": "Repository", + "Type": "Package", + "Title": "Easy Access to Model Information for Various Model Objects", + "Authors@R": "c(person(given = \"Daniel\", family = \"L\u00fcdecke\", role = c(\"aut\", \"cre\"), email = \"officialeasystats@gmail.com\", comment = c(ORCID = \"0000-0002-8895-3206\")), person(given = \"Dominique\", family = \"Makowski\", role = c(\"aut\", \"ctb\"), email = \"dom.makowski@gmail.com\", comment = c(ORCID = \"0000-0001-5375-9967\")), person(given = \"Indrajeet\", family = \"Patil\", role = c(\"aut\", \"ctb\"), email = \"patilindrajeet.science@gmail.com\", comment = c(ORCID = \"0000-0003-1995-6531\")), person(given = \"Philip\", family = \"Waggoner\", role = c(\"aut\", \"ctb\"), email = \"philip.waggoner@gmail.com\", comment = c(ORCID = \"0000-0002-7825-7573\")), person(given = \"Mattan S.\", family = \"Ben-Shachar\", role = c(\"aut\", \"ctb\"), email = \"matanshm@post.bgu.ac.il\", comment = c(ORCID = \"0000-0002-4287-4801\")), person(given = \"Brenton M.\", family = \"Wiernik\", role = c(\"aut\", \"ctb\"), email = \"brenton@wiernik.org\", comment = c(ORCID = \"0000-0001-9560-6336\")), person(given = \"Vincent\", family = \"Arel-Bundock\", email = \"vincent.arel-bundock@umontreal.ca\", role = c(\"aut\", \"ctb\"), comment = c(ORCID = \"0000-0003-2042-7063\")), person(given = \"Etienne\", family = \"Bacher\", email = \"etienne.bacher@protonmail.com\", role = c(\"aut\", \"ctb\"), comment = c(ORCID = \"0000-0002-9271-5075\")), person(given = \"Alex\", family = \"Hayes\", role = c(\"rev\"), email = \"alexpghayes@gmail.com\", comment = c(ORCID = \"0000-0002-4985-5160\")), person(given = \"Grant\", family = \"McDermott\", role = c(\"ctb\"), email = \"grantmcd@uoregon.edu\", comment = c(ORCID = \"0000-0001-7883-8573\")), person(given = \"R\u00e9mi\", family = \"Th\u00e9riault\", role = \"ctb\", email = \"remi.theriault@mail.mcgill.ca\", comment = c(ORCID = \"0000-0003-4315-6788\")), person(given = \"Alex\", family = \"Reinhart\", role = \"ctb\", email = \"areinhar@stat.cmu.edu\", comment = c(ORCID = \"0000-0002-6658-514X\")))", + "Maintainer": "Daniel L\u00fcdecke ", + "Description": "A tool to provide an easy, intuitive and consistent access to information contained in various R models, like model formulas, model terms, information about random effects, data that was used to fit the model or data from response variables. 'insight' mainly revolves around two types of functions: Functions that find (the names of) information, starting with 'find_', and functions that get the underlying data, starting with 'get_'. The package has a consistent syntax and works with many different model objects, where otherwise functions to access these information are missing.", + "License": "GPL-3", + "URL": "https://easystats.github.io/insight/", + "BugReports": "https://github.com/easystats/insight/issues", + "Depends": [ + "R (>= 3.6)" + ], + "Imports": [ + "methods", + "stats", + "utils" + ], + "Suggests": [ + "AER", + "afex", + "aod", + "ape", + "BayesFactor", + "bayestestR", + "bbmle", + "bdsmatrix", + "betareg", + "biglm", + "BH", + "blavaan (>= 0.5-5)", + "blme", + "boot", + "brms", + "broom", + "car", + "carData", + "censReg", + "cgam", + "clubSandwich", + "cobalt", + "coxme", + "cplm", + "crch", + "curl", + "datawizard (>= 1.2.0)", + "dbarts", + "effectsize", + "emmeans", + "epiR", + "estimatr", + "feisr", + "fixest (>= 0.11.2)", + "fungible", + "fwb", + "gam", + "gamlss", + "gamlss.data", + "gamm4", + "gbm", + "gee", + "geepack", + "geoR", + "GLMMadaptive", + "glmmTMB (>= 1.1.12)", + "glmtoolbox", + "gmnl", + "grDevices", + "gt", + "httptest2", + "httr2", + "interp", + "ivreg", + "JM", + "knitr", + "lavaan", + "lavaSearch2", + "lcmm", + "lfe", + "lme4", + "lmerTest", + "lmtest", + "logistf", + "logitr", + "marginaleffects (>= 0.29.0)", + "MASS", + "Matrix", + "mclogit", + "mclust", + "MCMCglmm", + "merTools", + "metaBMA", + "metadat", + "metafor", + "metaplus", + "mgcv", + "mhurdle", + "mice (>= 3.17.0)", + "mlogit", + "mmrm", + "modelbased (>= 0.9.0)", + "multgee", + "MuMIn", + "mvtnorm", + "nestedLogit", + "nlme", + "nnet", + "nonnest2", + "ordinal", + "panelr", + "parameters (>= 0.28.0)", + "parsnip", + "pbkrtest", + "performance", + "phylolm", + "plm", + "PROreg (>= 1.3.0)", + "pscl", + "psych", + "quantreg", + "Rcpp", + "RcppEigen", + "reformulas", + "recipes", + "rmarkdown", + "rms", + "robustbase", + "robustlmm", + "rpart", + "rstanarm (>= 2.21.1)", + "rstantools (>= 2.1.0)", + "rstpm2", + "rstudioapi", + "RWiener", + "sandwich", + "sdmTMB", + "sampleSelection", + "serp", + "speedglm", + "splines", + "statmod", + "survey", + "survival", + "svylme", + "testthat", + "tidymodels", + "tinytable (>= 0.13.0)", + "TMB", + "truncreg", + "tune", + "tweedie", + "VGAM", + "WeightIt", + "withr", + "workflows" + ], + "VignetteBuilder": "knitr", + "Encoding": "UTF-8", + "Language": "en-US", + "RoxygenNote": "7.3.3", + "Config/testthat/edition": "3", + "Config/testthat/parallel": "true", + "Config/Needs/website": "easystats/easystatstemplate", + "Config/Needs/check": "stan-dev/cmdstanr", + "NeedsCompilation": "no", + "Author": "Daniel L\u00fcdecke [aut, cre] (ORCID: ), Dominique Makowski [aut, ctb] (ORCID: ), Indrajeet Patil [aut, ctb] (ORCID: ), Philip Waggoner [aut, ctb] (ORCID: ), Mattan S. Ben-Shachar [aut, ctb] (ORCID: ), Brenton M. Wiernik [aut, ctb] (ORCID: ), Vincent Arel-Bundock [aut, ctb] (ORCID: ), Etienne Bacher [aut, ctb] (ORCID: ), Alex Hayes [rev] (ORCID: ), Grant McDermott [ctb] (ORCID: ), R\u00e9mi Th\u00e9riault [ctb] (ORCID: ), Alex Reinhart [ctb] (ORCID: )", + "Repository": "CRAN" + }, + "isoband": { + "Package": "isoband", + "Version": "0.3.0", + "Source": "Repository", + "Title": "Generate Isolines and Isobands from Regularly Spaced Elevation Grids", + "Authors@R": "c( person(\"Hadley\", \"Wickham\", , \"hadley@posit.co\", role = \"aut\", comment = c(ORCID = \"0000-0003-4757-117X\")), person(\"Claus O.\", \"Wilke\", , \"wilke@austin.utexas.edu\", role = \"aut\", comment = c(\"Original author\", ORCID = \"0000-0002-7470-9261\")), person(\"Thomas Lin\", \"Pedersen\", , \"thomas.pedersen@posit.co\", role = c(\"aut\", \"cre\"), comment = c(ORCID = \"0000-0002-5147-4711\")), person(\"Posit, PBC\", role = c(\"cph\", \"fnd\"), comment = c(ROR = \"03wc8by49\")) )", + "Description": "A fast C++ implementation to generate contour lines (isolines) and contour polygons (isobands) from regularly spaced grids containing elevation data.", + "License": "MIT + file LICENSE", + "URL": "https://isoband.r-lib.org, https://github.com/r-lib/isoband", + "BugReports": "https://github.com/r-lib/isoband/issues", + "Imports": [ + "cli", + "grid", + "rlang", + "utils" + ], + "Suggests": [ + "covr", + "ggplot2", + "knitr", + "magick", + "bench", + "rmarkdown", + "sf", + "testthat (>= 3.0.0)", + "xml2" + ], + "VignetteBuilder": "knitr", + "Config/Needs/website": "tidyverse/tidytemplate", + "Config/testthat/edition": "3", + "Config/usethis/last-upkeep": "2025-12-05", + "Encoding": "UTF-8", + "RoxygenNote": "7.3.3", + "Config/build/compilation-database": "true", + "LinkingTo": [ + "cpp11" + ], + "NeedsCompilation": "yes", + "Author": "Hadley Wickham [aut] (ORCID: ), Claus O. Wilke [aut] (Original author, ORCID: ), Thomas Lin Pedersen [aut, cre] (ORCID: ), Posit, PBC [cph, fnd] (ROR: )", + "Maintainer": "Thomas Lin Pedersen ", + "Repository": "CRAN" + }, + "iterators": { + "Package": "iterators", + "Version": "1.0.14", + "Source": "Repository", + "Type": "Package", + "Title": "Provides Iterator Construct", + "Authors@R": "c(person(\"Folashade\", \"Daniel\", role=\"cre\", email=\"fdaniel@microsoft.com\"), person(\"Revolution\", \"Analytics\", role=c(\"aut\", \"cph\")), person(\"Steve\", \"Weston\", role=\"aut\"))", + "Description": "Support for iterators, which allow a programmer to traverse through all the elements of a vector, list, or other collection of data.", + "URL": "https://github.com/RevolutionAnalytics/iterators", + "Depends": [ + "R (>= 2.5.0)", + "utils" + ], + "Suggests": [ + "RUnit", + "foreach" + ], + "License": "Apache License (== 2.0)", + "NeedsCompilation": "no", + "Author": "Folashade Daniel [cre], Revolution Analytics [aut, cph], Steve Weston [aut]", + "Maintainer": "Folashade Daniel ", + "Repository": "CRAN" + }, + "jose": { + "Package": "jose", + "Version": "2.0.0", + "Source": "Repository", + "Type": "Package", + "Title": "JavaScript Object Signing and Encryption", + "Authors@R": "person(\"Jeroen\", \"Ooms\", role = c(\"aut\", \"cre\"), email = \"jeroenooms@gmail.com\", comment = c(ORCID = \"0000-0002-4035-0289\"))", + "Description": "Read and write JSON Web Keys (JWK, rfc7517), generate and verify JSON Web Signatures (JWS, rfc7515) and encode/decode JSON Web Tokens (JWT, rfc7519) . These standards provide modern signing and encryption formats that are natively supported by browsers via the JavaScript WebCryptoAPI , and used by services like OAuth 2.0, LetsEncrypt, and Github Apps.", + "License": "MIT + file LICENSE", + "URL": "https://r-lib.r-universe.dev/jose", + "BugReports": "https://github.com/r-lib/jose/issues", + "Depends": [ + "openssl (>= 1.2.1)" + ], + "Imports": [ + "jsonlite" + ], + "RoxygenNote": "7.3.3.9000", + "VignetteBuilder": "knitr", + "Suggests": [ + "spelling", + "testthat", + "knitr", + "rmarkdown" + ], + "Encoding": "UTF-8", + "Language": "en-US", + "NeedsCompilation": "no", + "Author": "Jeroen Ooms [aut, cre] (ORCID: )", + "Maintainer": "Jeroen Ooms ", + "Repository": "CRAN" + }, + "jpeg": { + "Package": "jpeg", + "Version": "0.1-11", + "Source": "Repository", + "Title": "Read and write JPEG images", + "Author": "Simon Urbanek [aut, cre, cph] (https://urbanek.org, )", + "Authors@R": "person(\"Simon\", \"Urbanek\", role=c(\"aut\",\"cre\",\"cph\"), email=\"Simon.Urbanek@r-project.org\", comment=c(\"https://urbanek.org\", ORCID=\"0000-0003-2297-1732\"))", + "Maintainer": "Simon Urbanek ", + "Depends": [ + "R (>= 2.9.0)" + ], + "Description": "This package provides an easy and simple way to read, write and display bitmap images stored in the JPEG format. It can read and write both files and in-memory raw vectors.", + "License": "GPL-2 | GPL-3", + "SystemRequirements": "libjpeg", + "URL": "https://www.rforge.net/jpeg/", + "BugReports": "https://github.com/s-u/jpeg/issues", + "NeedsCompilation": "yes", + "Repository": "CRAN" + }, + "jquerylib": { + "Package": "jquerylib", + "Version": "0.1.4", + "Source": "Repository", + "Title": "Obtain 'jQuery' as an HTML Dependency Object", + "Authors@R": "c( person(\"Carson\", \"Sievert\", role = c(\"aut\", \"cre\"), email = \"carson@rstudio.com\", comment = c(ORCID = \"0000-0002-4958-2844\")), person(\"Joe\", \"Cheng\", role = \"aut\", email = \"joe@rstudio.com\"), person(family = \"RStudio\", role = \"cph\"), person(family = \"jQuery Foundation\", role = \"cph\", comment = \"jQuery library and jQuery UI library\"), person(family = \"jQuery contributors\", role = c(\"ctb\", \"cph\"), comment = \"jQuery library; authors listed in inst/lib/jquery-AUTHORS.txt\") )", + "Description": "Obtain any major version of 'jQuery' () and use it in any webpage generated by 'htmltools' (e.g. 'shiny', 'htmlwidgets', and 'rmarkdown'). Most R users don't need to use this package directly, but other R packages (e.g. 'shiny', 'rmarkdown', etc.) depend on this package to avoid bundling redundant copies of 'jQuery'.", + "License": "MIT + file LICENSE", + "Encoding": "UTF-8", + "Config/testthat/edition": "3", + "RoxygenNote": "7.0.2", + "Imports": [ + "htmltools" + ], + "Suggests": [ + "testthat" + ], + "NeedsCompilation": "no", + "Author": "Carson Sievert [aut, cre] (), Joe Cheng [aut], RStudio [cph], jQuery Foundation [cph] (jQuery library and jQuery UI library), jQuery contributors [ctb, cph] (jQuery library; authors listed in inst/lib/jquery-AUTHORS.txt)", + "Maintainer": "Carson Sievert ", + "Repository": "CRAN" + }, + "jsonlite": { + "Package": "jsonlite", + "Version": "2.0.0", + "Source": "Repository", + "Title": "A Simple and Robust JSON Parser and Generator for R", + "License": "MIT + file LICENSE", + "Depends": [ + "methods" + ], + "Authors@R": "c( person(\"Jeroen\", \"Ooms\", role = c(\"aut\", \"cre\"), email = \"jeroenooms@gmail.com\", comment = c(ORCID = \"0000-0002-4035-0289\")), person(\"Duncan\", \"Temple Lang\", role = \"ctb\"), person(\"Lloyd\", \"Hilaiel\", role = \"cph\", comment=\"author of bundled libyajl\"))", + "URL": "https://jeroen.r-universe.dev/jsonlite https://arxiv.org/abs/1403.2805", + "BugReports": "https://github.com/jeroen/jsonlite/issues", + "Maintainer": "Jeroen Ooms ", + "VignetteBuilder": "knitr, R.rsp", + "Description": "A reasonably fast JSON parser and generator, optimized for statistical data and the web. Offers simple, flexible tools for working with JSON in R, and is particularly powerful for building pipelines and interacting with a web API. The implementation is based on the mapping described in the vignette (Ooms, 2014). In addition to converting JSON data from/to R objects, 'jsonlite' contains functions to stream, validate, and prettify JSON data. The unit tests included with the package verify that all edge cases are encoded and decoded consistently for use with dynamic data in systems and applications.", + "Suggests": [ + "httr", + "vctrs", + "testthat", + "knitr", + "rmarkdown", + "R.rsp", + "sf" + ], + "RoxygenNote": "7.3.2", + "Encoding": "UTF-8", + "NeedsCompilation": "yes", + "Author": "Jeroen Ooms [aut, cre] (), Duncan Temple Lang [ctb], Lloyd Hilaiel [cph] (author of bundled libyajl)", + "Repository": "CRAN" + }, + "juicyjuice": { + "Package": "juicyjuice", + "Version": "0.1.0", + "Source": "Repository", + "Title": "Inline CSS Properties into HTML Tags Using 'juice'", + "Authors@R": "c( person(\"Richard\", \"Iannone\", , \"riannone@me.com\", c(\"aut\", \"cre\", \"cph\"), comment = c(ORCID = \"0000-0003-3925-190X\")), person(\"Automattic\", role = c(\"cph\"), comment = \"juice library\"), person(\"juice contributors\", role = c(\"ctb\"), comment = \"juice library\") )", + "Description": "There are occasions where you need a piece of HTML with integrated styles. A prime example of this is HTML email. This transformation involves moving the CSS and associated formatting instructions from the style block in the head of your document into the body of the HTML. Many prominent email clients require integrated styles in HTML email; otherwise a received HTML email will be displayed without any styling. This package will quickly and precisely perform these CSS transformations when given HTML text and it does so by using the JavaScript 'juice' library.", + "License": "MIT + file LICENSE", + "URL": "https://github.com/rich-iannone/juicyjuice", + "BugReports": "https://github.com/rich-iannone/juicyjuice/issues", + "Encoding": "UTF-8", + "RoxygenNote": "7.2.1", + "Imports": [ + "V8 (>= 4.2.0)" + ], + "Suggests": [ + "testthat (>= 3.0.0)" + ], + "Config/testthat/edition": "3", + "NeedsCompilation": "no", + "Author": "Richard Iannone [aut, cre, cph] (), Automattic [cph] (juice library), juice contributors [ctb] (juice library)", + "Maintainer": "Richard Iannone ", + "Repository": "CRAN" + }, + "kableExtra": { + "Package": "kableExtra", + "Version": "1.4.0", + "Source": "Repository", + "Type": "Package", + "Title": "Construct Complex Table with 'kable' and Pipe Syntax", + "Authors@R": "c( person('Hao', 'Zhu', email = 'haozhu233@gmail.com', role = c('aut', 'cre'), comment = c(ORCID = '0000-0002-3386-6076')), person('Thomas', 'Travison', role = 'ctb'), person('Timothy', 'Tsai', role = 'ctb'), person('Will', 'Beasley', email = 'wibeasley@hotmail.com', role = 'ctb'), person('Yihui', 'Xie', email = 'xie@yihui.name', role = 'ctb'), person('GuangChuang', 'Yu', email = 'guangchuangyu@gmail.com', role = 'ctb'), person('St\u00e9phane', 'Laurent', role = 'ctb'), person('Rob', 'Shepherd', role = 'ctb'), person('Yoni', 'Sidi', role = 'ctb'), person('Brian', 'Salzer', role = 'ctb'), person('George', 'Gui', role = 'ctb'), person('Yeliang', 'Fan', role = 'ctb'), person('Duncan', 'Murdoch', role = 'ctb'), person('Vincent', 'Arel-Bundock', role = 'ctb'), person('Bill', 'Evans', role = 'ctb') )", + "Description": "Build complex HTML or 'LaTeX' tables using 'kable()' from 'knitr' and the piping syntax from 'magrittr'. Function 'kable()' is a light weight table generator coming from 'knitr'. This package simplifies the way to manipulate the HTML or 'LaTeX' codes generated by 'kable()' and allows users to construct complex tables and customize styles using a readable syntax.", + "License": "MIT + file LICENSE", + "URL": "http://haozhu233.github.io/kableExtra/, https://github.com/haozhu233/kableExtra", + "BugReports": "https://github.com/haozhu233/kableExtra/issues", + "Depends": [ + "R (>= 3.1.0)" + ], + "Imports": [ + "knitr (>= 1.33)", + "magrittr", + "stringr (>= 1.0)", + "xml2 (>= 1.1.1)", + "rmarkdown (>= 1.6.0)", + "scales", + "viridisLite", + "stats", + "grDevices", + "htmltools", + "rstudioapi", + "tools", + "digest", + "graphics", + "svglite" + ], + "Suggests": [ + "testthat", + "magick", + "tinytex", + "formattable", + "sparkline", + "webshot2" + ], + "Config/testthat/edition": "3", + "VignetteBuilder": "knitr", + "Encoding": "UTF-8", + "RoxygenNote": "7.2.3", + "Language": "en-US", + "NeedsCompilation": "no", + "Author": "Hao Zhu [aut, cre] (), Thomas Travison [ctb], Timothy Tsai [ctb], Will Beasley [ctb], Yihui Xie [ctb], GuangChuang Yu [ctb], St\u00e9phane Laurent [ctb], Rob Shepherd [ctb], Yoni Sidi [ctb], Brian Salzer [ctb], George Gui [ctb], Yeliang Fan [ctb], Duncan Murdoch [ctb], Vincent Arel-Bundock [ctb], Bill Evans [ctb]", + "Maintainer": "Hao Zhu ", + "Repository": "CRAN" + }, + "knitr": { + "Package": "knitr", + "Version": "1.51", + "Source": "Repository", + "Type": "Package", + "Title": "A General-Purpose Package for Dynamic Report Generation in R", + "Authors@R": "c( person(\"Yihui\", \"Xie\", role = c(\"aut\", \"cre\"), email = \"xie@yihui.name\", comment = c(ORCID = \"0000-0003-0645-5666\", URL = \"https://yihui.org\")), person(\"Abhraneel\", \"Sarma\", role = \"ctb\"), person(\"Adam\", \"Vogt\", role = \"ctb\"), person(\"Alastair\", \"Andrew\", role = \"ctb\"), person(\"Alex\", \"Zvoleff\", role = \"ctb\"), person(\"Amar\", \"Al-Zubaidi\", role = \"ctb\"), person(\"Andre\", \"Simon\", role = \"ctb\", comment = \"the CSS 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person(\"Kirill\", \"Mueller\", role = \"ctb\"), person(\"Kohske\", \"Takahashi\", role = \"ctb\"), person(\"Lorenz\", \"Walthert\", role = \"ctb\"), person(\"Lucas\", \"Gallindo\", role = \"ctb\"), person(\"Marius\", \"Hofert\", role = \"ctb\"), person(\"Martin\", \"Modr\u00e1k\", role = \"ctb\"), person(\"Michael\", \"Chirico\", role = \"ctb\"), person(\"Michael\", \"Friendly\", role = \"ctb\"), person(\"Michal\", \"Bojanowski\", role = \"ctb\"), person(\"Michel\", \"Kuhlmann\", role = \"ctb\"), person(\"Miller\", \"Patrick\", role = \"ctb\"), person(\"Nacho\", \"Caballero\", role = \"ctb\"), person(\"Nick\", \"Salkowski\", role = \"ctb\"), person(\"Niels Richard\", \"Hansen\", role = \"ctb\"), person(\"Noam\", \"Ross\", role = \"ctb\"), person(\"Obada\", \"Mahdi\", role = \"ctb\"), person(\"Pavel N.\", \"Krivitsky\", role = \"ctb\", comment=c(ORCID = \"0000-0002-9101-3362\")), person(\"Pedro\", \"Faria\", role = \"ctb\"), person(\"Qiang\", \"Li\", role = \"ctb\"), person(\"Ramnath\", \"Vaidyanathan\", role = \"ctb\"), person(\"Richard\", \"Cotton\", role = \"ctb\"), person(\"Robert\", \"Krzyzanowski\", role = \"ctb\"), person(\"Rodrigo\", \"Copetti\", role = \"ctb\"), person(\"Romain\", \"Francois\", role = \"ctb\"), person(\"Ruaridh\", \"Williamson\", role = \"ctb\"), person(\"Sagiru\", \"Mati\", role = \"ctb\", comment = c(ORCID = \"0000-0003-1413-3974\")), person(\"Scott\", \"Kostyshak\", role = \"ctb\"), person(\"Sebastian\", \"Meyer\", role = \"ctb\"), person(\"Sietse\", \"Brouwer\", role = \"ctb\"), person(c(\"Simon\", \"de\"), \"Bernard\", role = \"ctb\"), person(\"Sylvain\", \"Rousseau\", role = \"ctb\"), person(\"Taiyun\", \"Wei\", role = \"ctb\"), person(\"Thibaut\", \"Assus\", role = \"ctb\"), person(\"Thibaut\", \"Lamadon\", role = \"ctb\"), person(\"Thomas\", \"Leeper\", role = \"ctb\"), person(\"Tim\", \"Mastny\", role = \"ctb\"), person(\"Tom\", \"Torsney-Weir\", role = \"ctb\"), person(\"Trevor\", \"Davis\", role = \"ctb\"), 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The function rst2pdf() requires rst2pdf (https://github.com/rst2pdf/rst2pdf).", + "Collate": "'block.R' 'cache.R' 'citation.R' 'hooks-html.R' 'plot.R' 'utils.R' 'defaults.R' 'concordance.R' 'engine.R' 'highlight.R' 'themes.R' 'header.R' 'hooks-asciidoc.R' 'hooks-chunk.R' 'hooks-extra.R' 'hooks-latex.R' 'hooks-md.R' 'hooks-rst.R' 'hooks-textile.R' 'hooks.R' 'otel.R' 'output.R' 'package.R' 'pandoc.R' 'params.R' 'parser.R' 'pattern.R' 'rocco.R' 'spin.R' 'table.R' 'template.R' 'utils-conversion.R' 'utils-rd2html.R' 'utils-string.R' 'utils-sweave.R' 'utils-upload.R' 'utils-vignettes.R' 'zzz.R'", + "RoxygenNote": "7.3.3", + "NeedsCompilation": "no", + "Author": "Yihui Xie [aut, cre] (ORCID: , URL: https://yihui.org), Abhraneel Sarma [ctb], Adam Vogt [ctb], Alastair Andrew [ctb], Alex Zvoleff [ctb], Amar Al-Zubaidi [ctb], Andre Simon [ctb] (the CSS files under inst/themes/ were derived from the Highlight package http://www.andre-simon.de), Aron Atkins [ctb], Aaron Wolen [ctb], Ashley Manton [ctb], Atsushi Yasumoto [ctb] (ORCID: ), Ben Baumer [ctb], Brian Diggs [ctb], Brian Zhang [ctb], Bulat Yapparov [ctb], Cassio Pereira [ctb], Christophe Dervieux [ctb], David Hall [ctb], David Hugh-Jones [ctb], David Robinson [ctb], Doug Hemken [ctb], Duncan Murdoch [ctb], Elio Campitelli [ctb], Ellis Hughes [ctb], Emily Riederer [ctb], Fabian Hirschmann [ctb], Fitch Simeon [ctb], Forest Fang [ctb], Frank E Harrell Jr [ctb] (the Sweavel package at inst/misc/Sweavel.sty), Garrick Aden-Buie [ctb], Gregoire Detrez [ctb], Hadley Wickham [ctb], Hao Zhu [ctb], Heewon Jeon [ctb], Henrik Bengtsson [ctb], Hiroaki Yutani [ctb], Ian Lyttle [ctb], Hodges Daniel [ctb], Jacob Bien [ctb], Jake Burkhead [ctb], James Manton [ctb], Jared Lander [ctb], Jason Punyon [ctb], Javier Luraschi [ctb], Jeff Arnold [ctb], Jenny Bryan [ctb], Jeremy Ashkenas [ctb, cph] (the CSS file at inst/misc/docco-classic.css), Jeremy Stephens [ctb], Jim Hester [ctb], Joe Cheng [ctb], Johannes Ranke [ctb], John Honaker [ctb], John Muschelli [ctb], Jonathan Keane [ctb], JJ Allaire [ctb], Johan Toloe [ctb], Jonathan Sidi [ctb], Joseph Larmarange [ctb], Julien Barnier [ctb], Kaiyin Zhong [ctb], Kamil Slowikowski [ctb], Karl Forner [ctb], Kevin K. Smith [ctb], Kirill Mueller [ctb], Kohske Takahashi [ctb], Lorenz Walthert [ctb], Lucas Gallindo [ctb], Marius Hofert [ctb], Martin Modr\u00e1k [ctb], Michael Chirico [ctb], Michael Friendly [ctb], Michal Bojanowski [ctb], Michel Kuhlmann [ctb], Miller Patrick [ctb], Nacho Caballero [ctb], Nick Salkowski [ctb], Niels Richard Hansen [ctb], Noam Ross [ctb], Obada Mahdi [ctb], Pavel N. Krivitsky [ctb] (ORCID: ), Pedro Faria [ctb], Qiang Li [ctb], Ramnath Vaidyanathan [ctb], Richard Cotton [ctb], Robert Krzyzanowski [ctb], Rodrigo Copetti [ctb], Romain Francois [ctb], Ruaridh Williamson [ctb], Sagiru Mati [ctb] (ORCID: ), Scott Kostyshak [ctb], Sebastian Meyer [ctb], Sietse Brouwer [ctb], Simon de Bernard [ctb], Sylvain Rousseau [ctb], Taiyun Wei [ctb], Thibaut Assus [ctb], Thibaut Lamadon [ctb], Thomas Leeper [ctb], Tim Mastny [ctb], Tom Torsney-Weir [ctb], Trevor Davis [ctb], Viktoras Veitas [ctb], Weicheng Zhu [ctb], Wush Wu [ctb], Zachary Foster [ctb], Zhian N. Kamvar [ctb] (ORCID: ), Posit Software, PBC [cph, fnd]", + "Maintainer": "Yihui Xie ", + "Repository": "CRAN" + }, + "labeling": { + "Package": "labeling", + "Version": "0.4.3", + "Source": "Repository", + "Type": "Package", + "Title": "Axis Labeling", + "Date": "2023-08-29", + "Author": "Justin Talbot,", + "Maintainer": "Nuno Sempere ", + "Description": "Functions which provide a range of axis labeling algorithms.", + "License": "MIT + file LICENSE | Unlimited", + "Collate": "'labeling.R'", + "NeedsCompilation": "no", + "Imports": [ + "stats", + "graphics" + ], + "Repository": "CRAN" + }, + "labelled": { + "Package": "labelled", + "Version": "2.16.0", + "Source": "Repository", + "Type": "Package", + "Title": "Manipulating Labelled Data", + "Maintainer": "Joseph Larmarange ", + "Authors@R": "c( person(\"Joseph\", \"Larmarange\", email = \"joseph@larmarange.net\", role = c(\"aut\", \"cre\"), comment = c(ORCID = \"0000-0001-7097-700X\")), person(\"Daniel\", \"Ludecke\", role = \"ctb\"), person(\"Hadley\", \"Wickham\", role = \"ctb\"), person(\"Michal\", \"Bojanowski\", role = \"ctb\"), person(\"Fran\u00e7ois\", \"Briatte\", role = \"ctb\") )", + "Description": "Work with labelled data imported from 'SPSS' or 'Stata' with 'haven' or 'foreign'. This package provides useful functions to deal with \"haven_labelled\" and \"haven_labelled_spss\" classes introduced by 'haven' package.", + "License": "GPL (>= 3)", + "Encoding": "UTF-8", + "Depends": [ + "R (>= 3.2)" + ], + "Imports": [ + "haven (>= 2.4.1)", + "cli", + "dplyr (>= 1.1.0)", + "lifecycle", + "rlang (>= 1.1.0)", + "vctrs", + "stringr", + "tidyr (>= 1.3.0)", + "tidyselect" + ], + "Suggests": [ + "gt", + "knitr", + "rmarkdown", + "purrr", + "questionr", + "snakecase", + "spelling", + "survey", + "testthat (>= 3.2.0)" + ], + "Enhances": [ + "memisc" + ], + "URL": "https://larmarange.github.io/labelled/, https://github.com/larmarange/labelled", + "BugReports": "https://github.com/larmarange/labelled/issues", + "VignetteBuilder": "knitr", + "LazyData": "true", + "RoxygenNote": "7.3.3", + "Language": "en-US", + "Config/testthat/edition": "3", + "Config/Needs/check": "memisc", + "NeedsCompilation": "no", + "Author": "Joseph Larmarange [aut, cre] (ORCID: ), Daniel Ludecke [ctb], Hadley Wickham [ctb], Michal Bojanowski [ctb], Fran\u00e7ois Briatte [ctb]", + "Repository": "CRAN" + }, + "later": { + "Package": "later", + "Version": "1.4.8", + "Source": "Repository", + "Type": "Package", + "Title": "Utilities for Scheduling Functions to Execute Later with Event Loops", + "Authors@R": "c( person(\"Winston\", \"Chang\", , \"winston@posit.co\", role = \"aut\", comment = c(ORCID = \"0000-0002-1576-2126\")), person(\"Joe\", \"Cheng\", , \"joe@posit.co\", role = \"aut\"), person(\"Charlie\", \"Gao\", , \"charlie.gao@posit.co\", role = c(\"aut\", \"cre\"), comment = c(ORCID = \"0000-0002-0750-061X\")), person(\"Posit Software, PBC\", role = c(\"cph\", \"fnd\"), comment = c(ROR = \"03wc8by49\")), person(\"Marcus\", \"Geelnard\", role = c(\"ctb\", \"cph\"), comment = \"TinyCThread library, https://tinycthread.github.io/\"), person(\"Evan\", \"Nemerson\", role = c(\"ctb\", \"cph\"), comment = \"TinyCThread library, https://tinycthread.github.io/\") )", + "Description": "Executes arbitrary R or C functions some time after the current time, after the R execution stack has emptied. 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Methods are provided for real scalar and vector valued functions.", + "Depends": [ + "R (>= 2.11.1)" + ], + "LazyLoad": "yes", + "ByteCompile": "yes", + "License": "GPL-2", + "Copyright": "2006-2011, Bank of Canada. 2012-2016, Paul Gilbert", + "Author": "Paul Gilbert and Ravi Varadhan", + "Maintainer": "Paul Gilbert ", + "URL": "http://optimizer.r-forge.r-project.org/", + "NeedsCompilation": "no", + "Repository": "CRAN" + }, + "olsrr": { + "Package": "olsrr", + "Version": "0.7.0", + "Source": "Repository", + "Type": "Package", + "Title": "Tools for Building OLS Regression Models", + "Authors@R": "person(\"Aravind\", \"Hebbali\", email = \"hebbali.aravind@gmail.com\", role = c(\"aut\", \"cre\"))", + "Description": "Tools designed to make it easier for users, particularly beginner/intermediate R users to build ordinary least squares regression models. 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Supports RSA, DSA and EC curves P-256, P-384, P-521, and curve25519. Cryptographic signatures can either be created and verified manually or via x509 certificates. AES can be used in cbc, ctr or gcm mode for symmetric encryption; RSA for asymmetric (public key) encryption or EC for Diffie Hellman. High-level envelope functions combine RSA and AES for encrypting arbitrary sized data. Other utilities include key generators, hash functions (md5, sha1, sha256, etc), base64 encoder, a secure random number generator, and 'bignum' math methods for manually performing crypto calculations on large multibyte integers.", + "License": "MIT + file LICENSE", + "URL": "https://jeroen.r-universe.dev/openssl", + "BugReports": "https://github.com/jeroen/openssl/issues", + "SystemRequirements": "OpenSSL >= 1.0.2", + "VignetteBuilder": "knitr", + "Imports": [ + "askpass" + ], + "Suggests": [ + "curl", + "testthat (>= 2.1.0)", + "digest", + "knitr", + "rmarkdown", + "jsonlite", + "jose", + "sodium" + ], + "RoxygenNote": "7.3.2", + "Encoding": "UTF-8", + "NeedsCompilation": "yes", + "Author": "Jeroen Ooms [aut, cre] (ORCID: ), Oliver Keyes [ctb]", + "Maintainer": "Jeroen Ooms ", + "Repository": "CRAN" + }, + "otel": { + "Package": "otel", + "Version": "0.2.0", + "Source": "Repository", + "Title": "OpenTelemetry R API", + "Authors@R": "person(\"G\u00e1bor\", \"Cs\u00e1rdi\", , \"csardi.gabor@gmail.com\", role = c(\"aut\", \"cre\"))", + "Description": "High-quality, ubiquitous, and portable telemetry to enable effective observability. 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In particular, it performs all HTTP operations in parallel, so metadata resolution and package downloads are fast. Metadata and package files are cached on the local disk as well. 'pak' has a dependency solver, so it finds version conflicts before performing the installation. This version of 'pak' supports CRAN, 'Bioconductor' and 'GitHub' packages as well.", + "License": "GPL-3", + "URL": "https://pak.r-lib.org/, https://github.com/r-lib/pak", + "BugReports": "https://github.com/r-lib/pak/issues", + "Depends": [ + "R (>= 3.5)" + ], + "Imports": [ + "tools", + "utils" + ], + "Suggests": [ + "callr (>= 3.7.0)", + "cli (>= 3.2.0)", + "covr", + "curl (>= 4.3.2)", + "desc (>= 1.4.1)", + "filelock (>= 1.0.2)", + "gitcreds", + "glue (>= 1.6.2)", + "jsonlite (>= 1.8.0)", + "keyring (>= 1.4.0)", + "pingr", + "pkgbuild (>= 1.4.2)", + "pkgcache (>= 2.2.4)", + "pkgdepends (>= 0.9.0)", + "pkgload", + "pkgsearch (>= 3.1.0)", + "processx (>= 3.8.1)", + "ps (>= 1.6.0)", + "rstudioapi", + "testthat (>= 3.2.0)", + "webfakes", + "withr", + "yaml" + ], + "Biarch": "true", + "ByteCompile": "true", + "Config/build/extra-sources": "configure*", + "Config/needs/dependencies": "callr, cli, curl, desc, filelock, jsonlite, keyring, lpSolve, pkgbuild, pkgcache, pkgdepends, pkgsearch, processx, ps, yaml", + "Config/Needs/website": "r-lib/asciicast, rmarkdown, roxygen2, tidyverse/tidytemplate", + "Config/Needs/deploy": "cli, curl, desc, gitcreds, glue@1.6.2, gaborcsardi/jsonlite, processx, R6@2.5.1", + "Config/testthat/edition": "3", + "Config/usethis/last-upkeep": "2025-05-13", + "Encoding": "UTF-8", + "RoxygenNote": "7.3.3", + "RemoteType": "github", + "RemoteHost": "api.github.com", + "RemoteRepo": "pak", + "RemoteUsername": "r-lib", + "RemoteRef": "HEAD", + "RemoteSha": "b206d59965f8b963176457cfc1dfa63a948330e3", + "NeedsCompilation": "yes", + "Author": "G\u00e1bor Cs\u00e1rdi [aut, cre], Jim Hester [aut], Posit Software, PBC [cph, fnd] (ROR: ), Winston Chang [ctb] (R6, callr, processx), Ascent Digital Services [cph, fnd] (callr, processx), Hadley Wickham [ctb, cph] (cli, curl, pkgbuild, yaml), Jeroen Ooms [ctb] (curl, jsonlite), Ma\u00eblle Salmon [ctb] (desc, pkgsearch), Duncan Temple Lang [ctb] (jsonlite), Lloyd Hilaiel [cph] (jsonlite), Alec Wong [ctb] (keyring), Michel Berkelaar and lpSolve authors [ctb] (lpSolve), R Consortium [fnd] (pkgsearch), Jay Loden [ctb] (ps), Dave Daeschler [ctb] (ps), Giampaolo Rodola [ctb] (ps), Shawn Garbett [ctb] (yaml), Jeremy Stephens [ctb] (yaml), Kirill Simonov [ctb] (yaml), Yihui Xie [ctb] (yaml), Zhuoer Dong [ctb] (yaml), Jeffrey Horner [ctb] (yaml), Will Beasley [ctb] (yaml), Brendan O'Connor [ctb] (yaml), Gregory Warnes [ctb] (yaml), Michael Quinn [ctb] (yaml), Zhian Kamvar [ctb] (yaml), Charlie Gao [ctb] (yaml), Kuba Podg\u00f3rski [ctb] (zip), Rich Geldreich [ctb] (zip)", + "Maintainer": "G\u00e1bor Cs\u00e1rdi " + }, + "palmerpenguins": { + "Package": "palmerpenguins", + "Version": "0.1.1", + "Source": "Repository", + "Title": "Palmer Archipelago (Antarctica) Penguin Data", + "Date": "2022-08-12", + "Authors@R": "c( person(given = \"Allison\", family = \"Horst\", role = c(\"aut\", \"cre\"), email = \"ahorst@ucsb.edu\", comment = c(ORCID = \"0000-0002-6047-5564\")), person(given = \"Alison\", family = \"Hill\", role = c(\"aut\"), email = \"apresstats@gmail.com\", comment = c(ORCID = \"0000-0002-8082-1890\")), person(given = \"Kristen\", family = \"Gorman\", role = c(\"aut\"), email = \"kbgorman@alaska.edu\", comment = c(ORCID = \"0000-0002-0258-9264\")) )", + "Description": "Size measurements, clutch observations, and blood isotope ratios for adult foraging Ad\u00e9lie, Chinstrap, and Gentoo penguins observed on islands in the Palmer Archipelago near Palmer Station, Antarctica. Data were collected and made available by Dr. Kristen Gorman and the Palmer Station Long Term Ecological Research (LTER) Program.", + "License": "CC0", + "Encoding": "UTF-8", + "LazyData": "true", + "RoxygenNote": "7.2.1.9000", + "Depends": [ + "R (>= 2.10)" + ], + "Suggests": [ + "knitr", + "rmarkdown", + "tibble", + "ggplot2", + "dplyr", + "tidyr", + "recipes" + ], + "URL": "https://allisonhorst.github.io/palmerpenguins/, https://github.com/allisonhorst/palmerpenguins", + "BugReports": "https://github.com/allisonhorst/palmerpenguins/issues", + "NeedsCompilation": "no", + "Author": "Allison Horst [aut, cre] (), Alison Hill [aut] (), Kristen Gorman [aut] ()", + "Maintainer": "Allison Horst ", + "Repository": "CRAN" + }, + "pander": { + "Package": "pander", + "Version": "0.6.6", + "Source": "Repository", + "Authors@R": "c( person(\"Gergely\", \"Dar\u00f3czi\", , \"daroczig@rapporter.net\", role = c(\"aut\", \"cre\"), comment = c(ORCID = \"0000-0003-3149-8537\")), person(\"Roman\", \"Tsegelskyi\", , \"roman.tsegelskyi@gmail.com\", role = c(\"aut\")))", + "Title": "An R 'Pandoc' Writer", + "Type": "Package", + "Encoding": "UTF-8", + "Description": "Contains some functions catching all messages, 'stdout' and other useful information while evaluating R code and other helpers to return user specified text elements (like: header, paragraph, table, image, lists etc.) in 'pandoc' markdown or several type of R objects similarly automatically transformed to markdown format. Also capable of exporting/converting (the resulting) complex 'pandoc' documents to e.g. HTML, 'PDF', 'docx' or 'odt'. This latter reporting feature is supported in brew syntax or with a custom reference class with a smarty caching 'backend'.", + "Date": "2025-03-01", + "URL": "https://rapporter.github.io/pander/", + "BugReports": "https://github.com/rapporter/pander/issues", + "License": "AGPL-3 | file LICENSE", + "Depends": [ + "R (>= 2.15.0)" + ], + "Imports": [ + "grDevices", + "graphics", + "methods", + "utils", + "stats", + "digest", + "tools", + "Rcpp" + ], + "Suggests": [ + "grid", + "lattice", + "ggplot2 (>= 0.9.2)", + "sylly", + "sylly.en", + "logger", + "survival", + "microbenchmark", + "zoo", + "nlme", + "descr", + "MASS", + "knitr", + "rmarkdown", + "tables", + "reshape", + "memisc", + "Epi", + "randomForest", + "tseries", + "gtable", + "rms", + "forecast", + "data.table" + ], + "SystemRequirements": "pandoc (https://johnmacfarlane.net/pandoc) for exporting markdown files to other formats.", + "LinkingTo": [ + "Rcpp" + ], + "VignetteBuilder": "knitr", + "RoxygenNote": "7.3.2", + "NeedsCompilation": "yes", + "Author": "Gergely Dar\u00f3czi [aut, cre] (), Roman Tsegelskyi [aut]", + "Maintainer": "Gergely Dar\u00f3czi ", + "Repository": "CRAN" + }, + "parallelly": { + "Package": "parallelly", + "Version": "1.47.0", + "Source": "Repository", + "Title": "Enhancing the 'parallel' Package", + "Imports": [ + "parallel", + "tools", + "utils" + ], + "Suggests": [ + "commonmark", + "base64enc" + ], + "VignetteBuilder": "parallelly", + "Authors@R": "c( person(\"Henrik\", \"Bengtsson\", role = c(\"aut\", \"cre\", \"cph\"), email = \"henrikb@braju.com\", comment = c(ORCID = \"0000-0002-7579-5165\")), person(\"Mike\", \"Cheng\", role = c(\"ctb\"), email = \"mikefc@coolbutuseless.com\") )", + "Description": "Utility functions that enhance the 'parallel' package and support the built-in parallel backends of the 'future' package. 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Another example is makeClusterPSOCK(), which is backward compatible with parallel::makePSOCKcluster() while doing a better job in setting up remote cluster workers without the need for configuring the firewall to do port-forwarding to your local computer.", + "License": "LGPL (>= 2.1)", + "LazyLoad": "TRUE", + "ByteCompile": "TRUE", + "URL": "https://parallelly.futureverse.org, https://github.com/futureverse/parallelly", + "BugReports": "https://github.com/futureverse/parallelly/issues", + "Language": "en-US", + "Encoding": "UTF-8", + "RoxygenNote": "7.3.3", + "NeedsCompilation": "yes", + "Author": "Henrik Bengtsson [aut, cre, cph] (ORCID: ), Mike Cheng [ctb]", + "Maintainer": "Henrik Bengtsson ", + "Repository": "CRAN" + }, + "parameters": { + "Package": "parameters", + "Version": "0.28.3", + "Source": "Repository", + "Type": "Package", + "Title": "Processing of Model Parameters", + "Authors@R": "c(person(given = \"Daniel\", family = \"L\u00fcdecke\", role = c(\"aut\", \"cre\"), email = \"officialeasystats@gmail.com\", comment = c(ORCID = \"0000-0002-8895-3206\")), person(given = \"Dominique\", family = \"Makowski\", role = \"aut\", email = \"dom.makowski@gmail.com\", comment = c(ORCID = \"0000-0001-5375-9967\")), person(given = \"Mattan S.\", family = \"Ben-Shachar\", role = \"aut\", email = \"matanshm@post.bgu.ac.il\", comment = c(ORCID = \"0000-0002-4287-4801\")), person(given = \"Indrajeet\", family = \"Patil\", role = \"aut\", email = \"patilindrajeet.science@gmail.com\", comment = c(ORCID = \"0000-0003-1995-6531\")), person(given = \"S\u00f8ren\", family = \"H\u00f8jsgaard\", role = \"aut\", email = \"sorenh@math.aau.dk\"), person(given = \"Brenton M.\", family = \"Wiernik\", role = \"aut\", email = \"brenton@wiernik.org\", comment = c(ORCID = \"0000-0001-9560-6336\")), person(given = \"Zen J.\", family = \"Lau\", role = \"ctb\", email = \"zenjuen.lau@ntu.edu.sg\"), person(given = \"Vincent\", family = \"Arel-Bundock\", role = \"ctb\", email = \"vincent.arel-bundock@umontreal.ca\", comment = c(ORCID = \"0000-0003-2042-7063\")), person(given = \"Jeffrey\", family = \"Girard\", role = \"ctb\", email = \"me@jmgirard.com\", comment = c(ORCID = \"0000-0002-7359-3746\")), person(given = \"Christina\", family = \"Maimone\", role = \"rev\", email = \"christina.maimone@northwestern.edu\"), person(given = \"Niels\", family = \"Ohlsen\", role = \"rev\"), person(given = \"Douglas Ezra\", family = \"Morrison\", role = \"ctb\", email = \"dmorrison01@ucla.edu\", comment = c(ORCID = \"0000-0002-7195-830X\")), person(given = \"Joseph\", family = \"Luchman\", role = \"ctb\", email = \"jluchman@gmail.com\", comment = c(ORCID = \"0000-0002-8886-9717\")))", + "Maintainer": "Daniel L\u00fcdecke ", + "Description": "Utilities for processing the parameters of various statistical models. Beyond computing p values, CIs, and other indices for a wide variety of models (see list of supported models using the function 'insight::supported_models()'), this package implements features like bootstrapping or simulating of parameters and models, feature reduction (feature extraction and variable selection) as well as functions to describe data and variable characteristics (e.g. skewness, kurtosis, smoothness or distribution).", + "License": "GPL-3", + "URL": "https://easystats.github.io/parameters/", + "BugReports": "https://github.com/easystats/parameters/issues", + "Depends": [ + "R (>= 3.6)" + ], + "Imports": [ + "bayestestR (>= 0.17.0)", + "datawizard (>= 1.3.0)", + "insight (>= 1.4.2)", + "graphics", + "methods", + "stats", + "utils" + ], + "Suggests": [ + "AER", + "afex", + "aod", + "BayesFactor (>= 0.9.12-4.7)", + "BayesFM", + "bbmle", + "betareg", + "BH", + "biglm", + "blme", + "boot", + "brglm2", + "brms", + "broom", + "broom.mixed", + "cAIC4", + "car", + "carData", + "cgam", + "ClassDiscovery", + "clubSandwich", + "cluster", + "cobalt", + "coda", + "correlation (>= 0.8.8)", + "coxme", + "cplm", + "curl", + "dbscan", + "did", + "discovr", + "distributional", + "domir (>= 0.2.0)", + "drc", + "DRR", + "effectsize (>= 1.0.1)", + "EGAnet", + "emmeans (>= 1.7.0)", + "epiR", + "estimatr", + "factoextra", + "FactoMineR", + "faraway", + "fastICA", + "fixest", + "fpc", + "gam", + "gamlss", + "gee", + "geepack", + "ggplot2", + "GLMMadaptive", + "glmmTMB (>= 1.1.12)", + "glmtoolbox", + "GPArotation", + "gt", + "haven", + "httr2", + "Hmisc", + "ivreg", + "knitr", + "lavaan", + "lcmm", + "lfe", + "lm.beta", + "lme4", + "lmerTest", + "lmtest", + "logistf", + "logitr", + "logspline", + "lqmm", + "M3C", + "marginaleffects (>= 0.29.0)", + "modelbased (>= 0.9.0)", + "MASS", + "Matrix", + "mclogit", + "mclust", + "MCMCglmm", + "mediation", + "merDeriv", + "metaBMA", + "metafor", + "mfx", + "mgcv", + "mice (>= 3.17.0)", + "mmrm", + "multcomp", + "MuMIn", + "mvtnorm", + "NbClust", + "nFactors", + "nestedLogit", + "nlme", + "nnet", + "openxlsx", + "ordinal", + "panelr", + "pbkrtest", + "PCDimension", + "performance (>= 0.14.0)", + "plm", + "PMCMRplus", + "poorman", + "posterior", + "PROreg (>= 1.3.0)", + "pscl", + "psych", + "pvclust", + "quantreg", + "randomForest", + "RcppEigen", + "rmarkdown", + "rms", + "rstan", + "rstanarm", + "sampleSelection", + "sandwich", + "see (>= 0.8.1)", + "serp", + "sparsepca", + "survey", + "survival", + "svylme", + "testthat (>= 3.2.1)", + "tidyselect", + "tinytable (>= 0.13.0)", + "TMB", + "truncreg", + "vdiffr", + "VGAM", + "WeightIt (>= 1.2.0)", + "withr", + "WRS2" + ], + "VignetteBuilder": "knitr", + "Encoding": "UTF-8", + "Language": "en-US", + "RoxygenNote": "7.3.3", + "Config/testthat/edition": "3", + "Config/testthat/parallel": "true", + "Config/Needs/website": "easystats/easystatstemplate", + "Config/Needs/check": "stan-dev/cmdstanr", + "Config/rcmdcheck/ignore-inconsequential-notes": "true", + "NeedsCompilation": "no", + "Author": "Daniel L\u00fcdecke [aut, cre] (ORCID: ), Dominique Makowski [aut] (ORCID: ), Mattan S. Ben-Shachar [aut] (ORCID: ), Indrajeet Patil [aut] (ORCID: ), S\u00f8ren H\u00f8jsgaard [aut], Brenton M. Wiernik [aut] (ORCID: ), Zen J. Lau [ctb], Vincent Arel-Bundock [ctb] (ORCID: ), Jeffrey Girard [ctb] (ORCID: ), Christina Maimone [rev], Niels Ohlsen [rev], Douglas Ezra Morrison [ctb] (ORCID: ), Joseph Luchman [ctb] (ORCID: )", + "Repository": "CRAN" + }, + "patchwork": { + "Package": "patchwork", + "Version": "1.3.2", + "Source": "Repository", + "Type": "Package", + "Title": "The Composer of Plots", + "Authors@R": "person(given = \"Thomas Lin\", family = \"Pedersen\", role = c(\"cre\", \"aut\"), email = \"thomasp85@gmail.com\", comment = c(ORCID = \"0000-0002-5147-4711\"))", + "Maintainer": "Thomas Lin Pedersen ", + "Description": "The 'ggplot2' package provides a strong API for sequentially building up a plot, but does not concern itself with composition of multiple plots. 'patchwork' is a package that expands the API to allow for arbitrarily complex composition of plots by, among others, providing mathematical operators for combining multiple plots. 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Implements parametric bootstrap test for generalized linear mixed models as implemented in 'lme4' and generalized linear models. The package is documented in the paper by Halekoh and H\u00f8jsgaard, (2012, ). Please see 'citation(\"pbkrtest\")' for citation details.", + "URL": "https://people.math.aau.dk/~sorenh/software/pbkrtest/", + "Depends": [ + "R (>= 4.2.0)", + "lme4 (>= 1.1.31)" + ], + "Imports": [ + "broom", + "dplyr", + "MASS", + "methods", + "numDeriv", + "Matrix (>= 1.2.3)", + "doBy (>= 4.6.22)" + ], + "Suggests": [ + "nlme", + "markdown", + "knitr" + ], + "Encoding": "UTF-8", + "VignetteBuilder": "knitr", + "License": "GPL (>= 2)", + "ByteCompile": "Yes", + "RoxygenNote": "7.3.2", + "LazyData": "true", + "NeedsCompilation": "no", + "Author": "Ulrich Halekoh [aut, cph], S\u00f8ren H\u00f8jsgaard [aut, cre, cph]", + "Repository": "CRAN" + }, + "performance": { + "Package": "performance", + "Version": "0.16.0", + "Source": "Repository", + "Type": "Package", + "Title": "Assessment of Regression Models Performance", + "Authors@R": "c(person(given = \"Daniel\", family = \"L\u00fcdecke\", role = c(\"aut\", \"cre\"), email = \"officialeasystats@gmail.com\", comment = c(ORCID = \"0000-0002-8895-3206\")), person(given = \"Dominique\", family = \"Makowski\", role = c(\"aut\", \"ctb\"), email = \"dom.makowski@gmail.com\", comment = c(ORCID = \"0000-0001-5375-9967\")), person(given = \"Mattan S.\", family = \"Ben-Shachar\", role = c(\"aut\", \"ctb\"), email = \"matanshm@post.bgu.ac.il\", comment = c(ORCID = \"0000-0002-4287-4801\")), person(given = \"Indrajeet\", family = \"Patil\", role = c(\"aut\", \"ctb\"), email = \"patilindrajeet.science@gmail.com\", comment = c(ORCID = \"0000-0003-1995-6531\")), person(given = \"Philip\", family = \"Waggoner\", role = c(\"aut\", \"ctb\"), email = \"philip.waggoner@gmail.com\", comment = c(ORCID = \"0000-0002-7825-7573\")), person(given = \"Brenton M.\", family = \"Wiernik\", role = c(\"aut\", \"ctb\"), email = \"brenton@wiernik.org\", comment = c(ORCID = \"0000-0001-9560-6336\")), person(given = \"R\u00e9mi\", family = \"Th\u00e9riault\", role = c(\"aut\", \"ctb\"), email = \"remi.theriault@mail.mcgill.ca\", comment = c(ORCID = \"0000-0003-4315-6788\")), person(given = \"Vincent\", family = \"Arel-Bundock\", email = \"vincent.arel-bundock@umontreal.ca\", role = \"ctb\", comment = c(ORCID = \"0000-0003-2042-7063\")), person(given = \"Martin\", family = \"Jullum\", role = \"rev\"), person(given = \"gjo11\", role = \"rev\"), person(given = \"Etienne\", family = \"Bacher\", email = \"etienne.bacher@protonmail.com\", role = \"ctb\", comment = c(ORCID = \"0000-0002-9271-5075\")), person(given = \"Joseph\", family = \"Luchman\", role = \"ctb\", comment = c(ORCID = \"0000-0002-8886-9717\")))", + "Maintainer": "Daniel L\u00fcdecke ", + "Description": "Utilities for computing measures to assess model quality, which are not directly provided by R's 'base' or 'stats' packages. These include e.g. measures like r-squared, intraclass correlation coefficient (Nakagawa, Johnson & Schielzeth (2017) ), root mean squared error or functions to check models for overdispersion, singularity or zero-inflation and more. Functions apply to a large variety of regression models, including generalized linear models, mixed effects models and Bayesian models. References: L\u00fcdecke et al. (2021) .", + "License": "GPL-3", + "URL": "https://easystats.github.io/performance/", + "BugReports": "https://github.com/easystats/performance/issues", + "Depends": [ + "R (>= 4.0)" + ], + "Imports": [ + "bayestestR (>= 0.17.0)", + "insight (>= 1.4.4)", + "datawizard (>= 1.3.0)", + "stats", + "methods", + "utils" + ], + "Suggests": [ + "AER", + "afex", + "BayesFactor", + "bayesplot", + "betareg", + "bigutilsr", + "blavaan", + "boot", + "brms", + "car", + "carData", + "CompQuadForm", + "correlation (>= 0.8.8)", + "cplm", + "curl", + "dagitty", + "dbscan", + "DHARMa (>= 0.4.7)", + "discovr", + "estimatr", + "fixest", + "flextable", + "forecast", + "ftExtra", + "gamm4", + "ggdag", + "glmmTMB (>= 1.1.12)", + "GPArotation", + "graphics", + "Hmisc", + "httr2", + "ICS", + "ICSOutlier", + "ISLR", + "ivreg", + "lavaan", + "lme4", + "lmtest", + "loo", + "MASS", + "Matrix", + "mclogit", + "mclust", + "metadat", + "metafor", + "mgcv", + "mlogit", + "modelbased (>= 0.12.0)", + "multimode", + "nestedLogit", + "nlme", + "nnet", + "nonnest2", + "ordinal", + "parallel", + "parameters (>= 0.28.0)", + "patchwork", + "pscl", + "psych", + "psychTools", + "quantreg", + "qqplotr (>= 0.0.6)", + "randomForest", + "RcppEigen", + "reformulas", + "rempsyc", + "rmarkdown", + "rstanarm", + "rstantools", + "sandwich", + "see (>= 0.13.0)", + "survey", + "survival", + "testthat (>= 3.2.1)", + "tweedie", + "VGAM", + "withr (>= 3.0.0)" + ], + "Encoding": "UTF-8", + "Language": "en-US", + "RoxygenNote": "7.3.3", + "Config/testthat/edition": "3", + "Config/testthat/parallel": "true", + "Config/Needs/website": "rstudio/bslib, r-lib/pkgdown, easystats/easystatstemplate", + "Config/rcmdcheck/ignore-inconsequential-notes": "true", + "NeedsCompilation": "no", + "Author": "Daniel L\u00fcdecke [aut, cre] (ORCID: ), Dominique Makowski [aut, ctb] (ORCID: ), Mattan S. 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[cph]", + "Maintainer": "Carson Sievert ", + "Repository": "CRAN" + }, + "plyr": { + "Package": "plyr", + "Version": "1.8.9", + "Source": "Repository", + "Title": "Tools for Splitting, Applying and Combining Data", + "Authors@R": "person(\"Hadley\", \"Wickham\", , \"hadley@rstudio.com\", role = c(\"aut\", \"cre\"))", + "Description": "A set of tools that solves a common set of problems: you need to break a big problem down into manageable pieces, operate on each piece and then put all the pieces back together. For example, you might want to fit a model to each spatial location or time point in your study, summarise data by panels or collapse high-dimensional arrays to simpler summary statistics. 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They work in terminals, in 'Emacs' 'ESS', 'RStudio', 'Windows' 'Rgui' and the 'macOS' 'R.app'. 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Asynchronous programming is useful for allowing a single R process to orchestrate multiple tasks in the background while also attending to something else. Semantics are similar to 'JavaScript' promises, but with a syntax that is idiomatic R.", + "License": "MIT + file LICENSE", + "URL": "https://rstudio.github.io/promises/, https://github.com/rstudio/promises", + "BugReports": "https://github.com/rstudio/promises/issues", + "Depends": [ + "R (>= 4.1.0)" + ], + "Imports": [ + "fastmap (>= 1.1.0)", + "later", + "lifecycle", + "magrittr (>= 1.5)", + "otel (>= 0.2.0)", + "R6", + "rlang" + ], + "Suggests": [ + "future (>= 1.21.0)", + "knitr", + "mirai", + "otelsdk (>= 0.2.0)", + "purrr", + "Rcpp", + "rmarkdown", + "spelling", + "testthat (>= 3.0.0)", + "vembedr" + ], + "VignetteBuilder": "knitr", + "Config/Needs/website": "rsconnect, tidyverse/tidytemplate", + "Config/testthat/edition": "3", + "Config/usethis/last-upkeep": "2025-05-27", + "Encoding": "UTF-8", + "Language": "en-US", + "RoxygenNote": "7.3.3", + "NeedsCompilation": "no", + "Author": "Joe Cheng [aut], Barret Schloerke [aut, cre] (ORCID: ), Winston Chang [aut] (ORCID: ), Charlie Gao [aut] (ORCID: ), Posit Software, PBC [cph, fnd] (ROR: )", + "Maintainer": "Barret Schloerke ", + "Repository": "CRAN" + }, + "ps": { + "Package": "ps", + "Version": "1.9.3", + "Source": "Repository", + "Title": "List, Query, Manipulate System Processes", + "Authors@R": "c( person(\"Jay\", \"Loden\", role = \"aut\"), person(\"Dave\", \"Daeschler\", role = \"aut\"), person(\"Giampaolo\", \"Rodola'\", role = \"aut\"), person(\"G\u00e1bor\", \"Cs\u00e1rdi\", , \"csardi.gabor@gmail.com\", role = c(\"aut\", \"cre\")), person(\"Posit Software, PBC\", role = c(\"cph\", \"fnd\"), comment = c(ROR = \"03wc8by49\")) )", + "Description": "List, query and manipulate all system processes, on 'Windows', 'Linux' and 'macOS'.", + "License": "MIT + file LICENSE", + "URL": "https://github.com/r-lib/ps, https://ps.r-lib.org/", + "BugReports": "https://github.com/r-lib/ps/issues", + "Depends": [ + "R (>= 3.4)" + ], + "Imports": [ + "utils" + ], + "Suggests": [ + "callr", + "covr", + "curl", + "pillar", + "pingr", + "processx (>= 3.1.0)", + "R6", + "rlang", + "testthat (>= 3.0.0)", + "webfakes", + "withr" + ], + "Biarch": "true", + "Config/Needs/website": "tidyverse/tidytemplate", + "Config/testthat/edition": "3", + "Config/usethis/last-upkeep": "2025-04-28", + "Encoding": "UTF-8", + "RoxygenNote": "7.3.3", + "NeedsCompilation": "yes", + "Author": "Jay Loden [aut], Dave Daeschler [aut], Giampaolo Rodola' [aut], G\u00e1bor Cs\u00e1rdi [aut, cre], Posit Software, PBC [cph, fnd] (ROR: )", + "Maintainer": "G\u00e1bor Cs\u00e1rdi ", + "Repository": "CRAN" + }, + "purrr": { + "Package": "purrr", + "Version": "1.2.2", + "Source": "Repository", + "Title": "Functional Programming Tools", + "Authors@R": "c( person(\"Hadley\", \"Wickham\", , \"hadley@posit.co\", role = c(\"aut\", \"cre\"), comment = c(ORCID = \"0000-0003-4757-117X\")), person(\"Lionel\", \"Henry\", , \"lionel@posit.co\", role = \"aut\"), person(\"Posit Software, PBC\", role = c(\"cph\", \"fnd\"), comment = c(ROR = \"https://ror.org/03wc8by49\")) )", + "Description": "A complete and consistent functional programming toolkit for R.", + "License": "MIT + file LICENSE", + "URL": "https://purrr.tidyverse.org/, https://github.com/tidyverse/purrr", + "BugReports": "https://github.com/tidyverse/purrr/issues", + "Depends": [ + "R (>= 4.1)" + ], + "Imports": [ + "cli (>= 3.6.1)", + "lifecycle (>= 1.0.3)", + "magrittr (>= 1.5.0)", + "rlang (>= 1.1.1)", + "vctrs (>= 0.6.3)" + ], + "Suggests": [ + "carrier (>= 0.3.0)", + "covr", + "dplyr (>= 0.7.8)", + "httr", + "knitr", + "lubridate", + "mirai (>= 2.5.1)", + "rmarkdown", + "testthat (>= 3.0.0)", + "tibble", + "tidyselect" + ], + "LinkingTo": [ + "cli" + ], + "VignetteBuilder": "knitr", + "Biarch": "true", + "Config/build/compilation-database": "true", + "Config/Needs/website": "tidyverse/tidytemplate, tidyr", + "Config/testthat/edition": "3", + "Config/testthat/parallel": "TRUE", + "Encoding": "UTF-8", + "RoxygenNote": "7.3.3", + "NeedsCompilation": "yes", + "Author": "Hadley Wickham [aut, cre] (ORCID: ), Lionel Henry [aut], Posit Software, PBC [cph, fnd] (ROR: )", + "Maintainer": "Hadley Wickham ", + "Repository": "CRAN" + }, + "quantreg": { + "Package": "quantreg", + "Version": "6.1", + "Source": "Repository", + "Title": "Quantile Regression", + "Description": "Estimation and inference methods for models for conditional quantile functions: Linear and nonlinear parametric and non-parametric (total variation penalized) models for conditional quantiles of a univariate response and several methods for handling censored survival data. Portfolio selection methods based on expected shortfall risk are also now included. See Koenker, R. (2005) Quantile Regression, Cambridge U. Press, and Koenker, R. et al. 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The 'ragg' package provides a set of graphic devices based on AGG to use as alternative to the raster devices provided through the 'grDevices' package.", + "License": "MIT + file LICENSE", + "URL": "https://ragg.r-lib.org, https://github.com/r-lib/ragg", + "BugReports": "https://github.com/r-lib/ragg/issues", + "Imports": [ + "systemfonts (>= 1.0.3)", + "textshaping (>= 0.3.0)" + ], + "Suggests": [ + "covr", + "graphics", + "grid", + "testthat (>= 3.0.0)" + ], + "LinkingTo": [ + "systemfonts", + "textshaping" + ], + "Config/build/compilation-database": "true", + "Config/Needs/website": "ggplot2, devoid, magick, bench, tidyr, ggridges, hexbin, sessioninfo, pkgdown, tidyverse/tidytemplate", + "Config/testthat/edition": "3", + "Config/usethis/last-upkeep": "2025-04-25", + "Encoding": "UTF-8", + "RoxygenNote": "7.3.3", + "SystemRequirements": "freetype2, libpng, libtiff, libjpeg, libwebp, libwebpmux", + "NeedsCompilation": "yes", + "Author": "Thomas Lin Pedersen [cre, aut] (ORCID: ), Maxim Shemanarev [aut, cph] (Author of AGG), Tony Juricic [ctb, cph] (Contributor to AGG), Milan Marusinec [ctb, cph] (Contributor to AGG), Spencer Garrett [ctb] (Contributor to AGG), Posit Software, PBC [cph, fnd] (ROR: )", + "Repository": "CRAN" + }, + "rappdirs": { + "Package": "rappdirs", + "Version": "0.3.4", + "Source": "Repository", + "Type": "Package", + "Title": "Application Directories: Determine Where to Save Data, Caches, and Logs", + "Authors@R": "c( person(\"Hadley\", \"Wickham\", , \"hadley@posit.co\", role = c(\"trl\", \"cre\", \"cph\")), person(\"Sridhar\", \"Ratnakumar\", role = \"aut\"), person(\"Trent\", \"Mick\", role = \"aut\"), person(\"ActiveState\", role = \"cph\", comment = \"R/appdir.r, R/cache.r, R/data.r, R/log.r translated from appdirs\"), person(\"Eddy\", \"Petrisor\", role = \"ctb\"), person(\"Trevor\", \"Davis\", role = c(\"trl\", \"aut\"), comment = c(ORCID = \"0000-0001-6341-4639\")), person(\"Gabor\", \"Csardi\", role = \"ctb\"), person(\"Gregory\", \"Jefferis\", role = \"ctb\"), person(\"Posit Software, PBC\", role = c(\"cph\", \"fnd\"), comment = c(ROR = \"03wc8by49\")) )", + "Description": "An easy way to determine which directories on the users computer you should use to save data, caches and logs. 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Convert between bibliography formats, including 'Bibtex', 'Biblatex', 'PubMed', 'Endnote', and 'Bibentry'. Includes a port of the 'bibutils' utilities by Chris Putnam . Supports all bibliography formats and character encodings implemented in 'bibutils'.", + "License": "GPL-2", + "URL": "https://geobosh.github.io/rbibutils/ (doc), https://CRAN.R-project.org/package=rbibutils", + "BugReports": "https://github.com/GeoBosh/rbibutils/issues", + "Depends": [ + "R (>= 2.10)" + ], + "Imports": [ + "utils", + "tools" + ], + "Suggests": [ + "testthat" + ], + "Encoding": "UTF-8", + "NeedsCompilation": "yes", + "Config/Needs/memcheck": "devtools, rcmdcheck", + "Author": "Georgi N. 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authors listed in inst/www/shared/jquery-AUTHORS.txt), jQuery UI contributors [ctb, cph] (jQuery UI library; authors listed in inst/www/shared/jqueryui/AUTHORS.txt), Mark Otto [ctb] (Bootstrap library), Jacob Thornton [ctb] (Bootstrap library), Bootstrap contributors [ctb] (Bootstrap library), Twitter, Inc [cph] (Bootstrap library), Prem Nawaz Khan [ctb] (Bootstrap accessibility plugin), Victor Tsaran [ctb] (Bootstrap accessibility plugin), Dennis Lembree [ctb] (Bootstrap accessibility plugin), Srinivasu Chakravarthula [ctb] (Bootstrap accessibility plugin), Cathy O'Connor [ctb] (Bootstrap accessibility plugin), PayPal, Inc [cph] (Bootstrap accessibility plugin), Stefan Petre [ctb, cph] (Bootstrap-datepicker library), Andrew Rowls [ctb, cph] (Bootstrap-datepicker library), Brian Reavis [ctb, cph] (selectize.js library), Salmen Bejaoui [ctb, cph] (selectize-plugin-a11y library), Denis Ineshin [ctb, cph] (ion.rangeSlider library), Sami Samhuri [ctb, cph] (Javascript strftime library), SpryMedia Limited [ctb, cph] (DataTables library), Ivan Sagalaev [ctb, cph] (highlight.js library), R Core Team [ctb, cph] (tar implementation from R)", + "Maintainer": "Carson Sievert ", + "Repository": "CRAN" + }, + "sjPlot": { + "Package": "sjPlot", + "Version": "2.9.0", + "Source": "Repository", + "Type": "Package", + "Encoding": "UTF-8", + "Title": "Data Visualization for Statistics in Social Science", + "Authors@R": "c( person(\"Daniel\", \"L\u00fcdecke\", email = \"d.luedecke@uke.de\", role = c(\"aut\", \"cre\"), comment = c(ORCID = \"0000-0002-8895-3206\")), person(\"Alexander\", \"Bartel\", role = \"ctb\", comment = c(ORCID = \"0000-0002-1280-6138\")), person(\"Carsten\", \"Schwemmer\", email = \"carsten.schwemmer@uni-bamberg.de\", role = \"ctb\"), person(given = \"Chuck\", family = \"Powell\", role = \"ctb\", email = \"ibecav@gmail.com\", comment = c(ORCID = \"0000-0002-3606-2188\")), person(given = \"Amir\", family = \"Djalovski\", role = \"ctb\", email = \"Amir.DJV@gmail.com\"), person(given = \"Johannes\", family = \"Titz\", role = \"ctb\", email = \"johannes@titz.science\", comment = c(ORCID = \"0000-0002-1102-5719\")))", + "Maintainer": "Daniel L\u00fcdecke ", + "Description": "Collection of plotting and table output functions for data visualization. Results of various statistical analyses (that are commonly used in social sciences) can be visualized using this package, including simple and cross tabulated frequencies, histograms, box plots, (generalized) linear models, mixed effects models, principal component analysis and correlation matrices, cluster analyses, scatter plots, stacked scales, effects plots of regression models (including interaction terms) and much more. 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