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simulation.py
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230 lines (182 loc) · 7.84 KB
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from pm4py.objects.log.importer.xes import importer as xes_importer
from pm4py.objects.petri_net.importer import importer as pnml_importer
from pm4py.algo.simulation.playout.petri_net import algorithm as simulator
import pm4py
import sys
import os
import numpy as np
from itertools import combinations,permutations
import datetime
import random
import pandas as pd
import func_timeout
import time
input_dir = "Input/S/"
input_petrinet_dir = input_dir + "PetriNet/"
input_clustering_dir = input_dir + "Clustering/"
output_dir = "Output/S/"
output_data_dir = output_dir + "Data/"
output_timing_dir = output_dir + "Timing/"
def read_statistics():
times_of_initial_state = {}
times_of_states = {}
average_trace_length = None
with open(input_petrinet_dir + "statistics.txt", "r") as f:
lines = f.readlines()
current_section = None
for line in lines:
line = line.strip()
if not line:
continue
# Detect sections
if line.startswith("Initial state times:"):
current_section = "initial"
continue
elif line.startswith("Times of states:"):
current_section = "states"
continue
elif line.startswith("Average trace length:"):
average_trace_length = float(line.split(":")[1].strip())
continue
# Parse the dictionary entries
if current_section == "initial":
key, value = line.split(":", 1)
# Convert key to string (character)
key_str = key.strip()
values_list = [int(x.strip()) for x in value.strip()[1:-1].split(",") if x.strip()]
times_of_initial_state[key_str] = values_list
elif current_section == "states":
key, value = line.split(":", 1)
value = value.strip()
if value == "[]":
values_list = []
else:
values_list = [int(x.strip()) for x in value[1:-1].split(",") if x.strip()]
times_of_states[key.strip()] = values_list
return times_of_initial_state, times_of_states, average_trace_length
def read_centroids():
centroids = {}
file = open(input_clustering_dir + "clustering_parameters.txt","r")
lines = file.readlines()
for line in lines:
line = line.replace("\n","")
line = line.replace(" ","")
line = line.replace("[","")
line = line.replace("]","")
tokens = line.split(":")
centroid_coordinates = tokens[-1].split(",")
centroids[tokens[0]] = []
for centroid_coordinate in centroid_coordinates:
centroids[tokens[0]].append(float(centroid_coordinate))
file.close()
return centroids
def read_petri_net():
petri_net = {}
petri_net["network"], petri_net["initial_marking"], petri_net["final_marking"] = pnml_importer.apply(input_petrinet_dir + "PN.pnml")
return petri_net
def simulate_traces(petri_net, average_trace_length):
simulated_event_log = simulator.apply(petri_net["network"], petri_net["initial_marking"], variant=simulator.Variants.BASIC_PLAYOUT, parameters={simulator.Variants.BASIC_PLAYOUT.value.Parameters.NO_TRACES: 1000})
traces = []
for trace in simulated_event_log:
state_transitions = []
for event in trace:
state_transitions.append(event["concept:name"])
traces.append(state_transitions)
return traces
def filter_traces(traces, average_trace_length, apply_constraints):
filtered_traces = []
for idx_t,trace in enumerate(traces):
temp = []
current_state = None
for idx_st,state_transition in enumerate(trace):
if current_state == None:
current_state = state_transition.split("-")[1].split("_")[1]
temp.append(state_transition)
else:
if current_state != state_transition.split("-")[1].split("_")[0]:
continue
else:
current_state = state_transition.split("-")[1].split("_")[1]
temp.append(state_transition)
if apply_constraints == 1:
if len(temp) >= average_trace_length - 10 and len(temp) <= average_trace_length + 10 and len(temp) > 0:
filtered_traces.append(temp.copy())
else:
if len(temp) > 0:
filtered_traces.append(temp.copy())
return filtered_traces
def simulate_time_series(simulated_traces, centroids, times_of_initial_state, times_of_states, synthetic_data):
simulated_time_series = []
simulated_time_series_state_times = []
for trace in simulated_traces:
state_times = []
rows = []
for idx,event in enumerate(trace):
if idx == 0:
#time_of_initial_state = random.choices(times_of_initial_state[event.split("-")[1].split("_")[0]], weights=times_of_initial_state[event.split("-")[1].split("_")[0]], k=1)[0]
time_of_initial_state = random.choice(times_of_initial_state[event.split("-")[1].split("_")[0]])
for i in range(0,time_of_initial_state):
rows.append(centroids[event.split("-")[1].split("_")[0]])
state_times.append(time_of_initial_state)
elif idx != 0:
try:
previous_state_time = random.choice(times_of_states[event])
except:
previous_state_time = 1
for i in range(0,previous_state_time):
rows.append(centroids[event.split("-")[1].split("_")[0]])
state_times.append(previous_state_time)
if synthetic_data == 0:
time_series = pd.DataFrame(columns = ["J2XA", "J2YA", "J2ZA"], data=rows)
else:
time_series = pd.DataFrame(columns = ["C1", "C2", "C3"], data=rows)
simulated_time_series.append(time_series)
simulated_time_series_state_times.append(state_times)
return simulated_time_series, simulated_time_series_state_times
def generate_traces(petri_net, average_trace_length, apply_constraints):
filtered_traces = []
while len(filtered_traces) != n_traces:
traces = simulate_traces(petri_net, average_trace_length)
filtered_traces = filtered_traces + filter_traces(traces, average_trace_length, apply_constraints)
if len(filtered_traces) > n_traces:
filtered_traces = filtered_traces[0:n_traces]
return filtered_traces
def write_time_series(simulated_time_series, simulated_traces, simulated_time_series_state_times):
for idx,time_series in enumerate(simulated_time_series):
isExist = os.path.exists(output_data_dir + "S_" + str(idx))
if not isExist:
os.makedirs(output_data_dir + "S_" + str(idx))
time_series.to_csv(output_data_dir + "S_" + str(idx) + "/WNDW_" + str(idx) + ".csv", index=False)
timings = open(output_data_dir + "S_" + str(idx) + "/timings.txt", "w")
for idx_e, event in enumerate(simulated_traces[idx]):
if idx_e < len(simulated_traces[idx]) - 1:
timings.write("State transition: " + event + ", time: " + str(simulated_time_series_state_times[idx][idx_e]) + "\n")
else:
timings.write("State transition: " + event + ", time: " + str(simulated_time_series_state_times[idx][idx_e]))
return None
def write_simulation_timing(simulation_time):
file = open(output_timing_dir + "simulation_time.txt", "w")
file.write(str(simulation_time))
file.close()
try:
n_traces = int(sys.argv[1])
synthetic_data = int(sys.argv[2])
except:
print("Enter the right number of input arguments")
sys.exit()
petri_net = read_petri_net()
centroids = read_centroids()
times_of_initial_state, times_of_states, average_trace_length = read_statistics()
try:
simulation_time = time.time()
apply_constraints = 1
simulated_traces = func_timeout.func_timeout(timeout=60, func=generate_traces, args=[petri_net, average_trace_length, apply_constraints])
simulation_time = time.time() - simulation_time
except func_timeout.FunctionTimedOut:
simulation_time = time.time()
apply_constraints = 0
simulated_traces = func_timeout.func_timeout(timeout=180, func=generate_traces, args=[petri_net, average_trace_length, apply_constraints])
simulation_time = time.time() - simulation_time
simulated_time_series, simulated_time_series_state_times = simulate_time_series(simulated_traces, centroids, times_of_initial_state, times_of_states, synthetic_data)
write_time_series(simulated_time_series, simulated_traces, simulated_time_series_state_times)
write_simulation_timing(simulation_time)