an error occurred when 'make'

[whoisleehom]

icc -c -Wall -std=c11 -I cafe -I libtree -I libcommon -fopenmp -O3 -DNDEBUG -o release/cafe_family.o cafe/cafe_family.c
cafe/cafe_family.c(188): error: expected an expression
for (int i = 0; i < pcf->num_species; i++)
^

cafe/cafe_family.c(188): error: identifier "i" is undefined
for (int i = 0; i < pcf->num_species; i++)
^

cafe/cafe_family.c(214): error: expected an expression
for (int i = 0; i< ptree->nlist->size; i++) {
^

cafe/cafe_family.c(214): error: identifier "i" is undefined
for (int i = 0; i< ptree->nlist->size; i++) {
^

cafe/cafe_family.c(229): error: expected an expression
for (int i = 0 ; i < pcf->num_species ; i++ )
^

compilation aborted for cafe/cafe_family.c (code 2)
make: *** [release/cafe_family.o] Error 2

This problem happens when I make the source codes of v4.2 and v4.2.1.

[benfulton]

I’m not sure how you got your std flag to be c11, but it should be c++11. The error indicates that a very old language compatibility is being used – C89 I believe.

…

-- Ben Fulton Indiana University From: whoisleehom <notifications@github.com> Sent: Wednesday, July 22, 2020 6:23 AM To: hahnlab/CAFE <CAFE@noreply.github.com> Cc: Subscribed <subscribed@noreply.github.com> Subject: [hahnlab/CAFE] an error occurred when 'make' (#83) icc -c -Wall -std=c11 -I cafe -I libtree -I libcommon -fopenmp -O3 -DNDEBUG -o release/cafe_family.o cafe/cafe_family.c cafe/cafe_family.c(188): error: expected an expression for (int i = 0; i < pcf->num_species; i++) ^ cafe/cafe_family.c(188): error: identifier "i" is undefined for (int i = 0; i < pcf->num_species; i++) ^ cafe/cafe_family.c(214): error: expected an expression for (int i = 0; i< ptree->nlist->size; i++) { ^ cafe/cafe_family.c(214): error: identifier "i" is undefined for (int i = 0; i< ptree->nlist->size; i++) { ^ cafe/cafe_family.c(229): error: expected an expression for (int i = 0 ; i < pcf->num_species ; i++ ) ^ compilation aborted for cafe/cafe_family.c (code 2) make: *** [release/cafe_family.o] Error 2 This problem happens when I make the source codes of v4.2 and v4.2.1. — You are receiving this because you are subscribed to this thread. Reply to this email directly, view it on GitHub<#83>, or unsubscribe<https://github.com/notifications/unsubscribe-auth/AAALIMAYMSKKXGOA6BB5MLLR424ZJANCNFSM4PER3A4Q>.

[whoisleehom]

I’m not sure how you got your std flag to be c11, but it should be c++11. The error indicates that a very old language compatibility is being used – C89 I believe.
…
-- Ben Fulton Indiana University From: whoisleehom notifications@github.com Sent: Wednesday, July 22, 2020 6:23 AM To: hahnlab/CAFE CAFE@noreply.github.com Cc: Subscribed subscribed@noreply.github.com Subject: [hahnlab/CAFE] an error occurred when 'make' (#83) icc -c -Wall -std=c11 -I cafe -I libtree -I libcommon -fopenmp -O3 -DNDEBUG -o release/cafe_family.o cafe/cafe_family.c cafe/cafe_family.c(188): error: expected an expression for (int i = 0; i < pcf->num_species; i++) ^ cafe/cafe_family.c(188): error: identifier "i" is undefined for (int i = 0; i < pcf->num_species; i++) ^ cafe/cafe_family.c(214): error: expected an expression for (int i = 0; i< ptree->nlist->size; i++) { ^ cafe/cafe_family.c(214): error: identifier "i" is undefined for (int i = 0; i< ptree->nlist->size; i++) { ^ cafe/cafe_family.c(229): error: expected an expression for (int i = 0 ; i < pcf->num_species ; i++ ) ^ compilation aborted for cafe/cafe_family.c (code 2) make: *** [release/cafe_family.o] Error 2 This problem happens when I make the source codes of v4.2 and v4.2.1. — You are receiving this because you are subscribed to this thread. Reply to this email directly, view it on GitHub<#83>, or unsubscribehttps://github.com/notifications/unsubscribe-auth/AAALIMAYMSKKXGOA6BB5MLLR424ZJANCNFSM4PER3A4Q.

There are two lines in my Makefile:
CFLAGS = -Wall -std=c11 $(INCLUDE) -fopenmp
CXXFLAGS = -Wall -std=c++11 $(INCLUDE) -fopenmp

Is there anything wrong with it?

[shanyunfeng]

I just meet this problem. How did you resolve it? Thanks

[shanyunfeng]

I changed gcc version from 4.47 to 5.22 by adding
export C_INCLUDE_PATH=$C_INCLUDE_PATH:/public/software/gcc-5.2.0/include
export CPLUS_INCLUDE_PATH=$CPLUS_INCLUDE_PATH:/public/software/gcc-5.2.0/include
export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/public/software/gcc-5.2.0/lib64:/public/software/gcc-5.2.0/mpc-0.8.1/lib:/public/software/gcc-5.2.0/l$
export LIBRARY_PATH=$LIBRARY_PATH:/public/software/gcc-5.2.0/lib64:/public/software/gcc-5.2.0/mpc-0.8.1/lib:/public/software/gcc-5.2.0/lib:/pu$
export PATH=/public/software/gcc-5.2.0/bin:$PATH

to my path

[shanyunfeng]

It still does not work.

make, then showed the same message as above.

[benfulton]

What is the output of

$ gcc --version
$ gcc -c -Wall -std=c11 -I cafe -I libtree -I libcommon -fopenmp -O3 -DNDEBUG -o release/cafe_family.o cafe/cafe_family.c

?