Using single-core execution.
getAllJunctionSeqCountVectors: dim(counts) = 809447,6 (Fri Jul 31 16:54:53 2020)
getAllJunctionSeqCountVectors: dim(gct) = 54727,6
getAllJunctionSeqCountVectors: out generated. dim = 809447,12 (Fri Jul 31 16:55:18 2020)
-----> count vectors generated (Fri Jul 31 16:55:18 2020)
-----> generating DESeqDataSet... (Fri Jul 31 16:55:18 2020)
Error in DESeqDataSet(se, design = design, ignoreRank) :
all samples have 0 counts for all genes. check the counting script.
Please help regarding this error
Please help regarding this error