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Anamnesis — Project Topology

System Architecture

                        ┌─────────────────────────────────────────┐
                        │              DATA SOURCES               │
                        │   (Claude, ChatGPT, Git, Browser)       │
                        └───────────────────┬─────────────────────┘
                                            │
                                            ▼
                        ┌─────────────────────────────────────────┐
                        │           PARSER LAYER (OCAML)          │
                        │      (Angstrom, Type-safe parsing)      │
                        └───────────────────┬─────────────────────┘
                                            │
                                            ▼
                        ┌─────────────────────────────────────────┐
                        │        ORCHESTRATOR LAYER (ELIXIR)      │
                        │      (OTP Supervision, HTTP API)        │
                        └──────────┬───────────────────┬──────────┘
                                   │                   │
                                   ▼                   ▼
                        ┌───────────────────────┐  ┌────────────────────────────────┐
                        │ REASONING (λPROLOG)   │  │ ANALYTICS (JULIA)              │
                        │ - Artifact Lifecycle  │  │ - RDF Gen, SPARQL Queries      │
                        │ - Fuzzy Categories    │  │ - Reservoir Computing (ESN)    │
                        └──────────┬────────────┘  └──────────┬─────────────────────┘
                                   │                          │
                                   └────────────┬─────────────┘
                                                ▼
                        ┌─────────────────────────────────────────┐
                        │           STORAGE LAYER (VIRTUOSO)      │
                        │      (RDF Triplestore, Named Graphs)    │
                        └───────────────────┬─────────────────────┘
                                            │
                                            ▼
                        ┌─────────────────────────────────────────┐
                        │        VISUALIZATION (AFFINESCRIPT)         │
                        │      (Reagraph, Timeline, React)        │
                        └─────────────────────────────────────────┘

Completion Dashboard

COMPONENT                          STATUS              NOTES
─────────────────────────────────  ──────────────────  ─────────────────────────────────
PIPELINE STAGES
  Parser (OCaml)                    ██████████ 100%    Claude parser stable
  Orchestrator (Elixir)             ██████████ 100%    Port infrastructure stable
  Reasoning (λProlog)               ████░░░░░░  40%    Lifecycle rules in progress
  Analytics (Julia)                 ████████░░  80%    RDF and ESN modules ready
  Visualization (AffineScript)          ██████░░░░  60%    Domain types & color mixing

INFRASTRUCTURE
  Virtuoso Integration              ████░░░░░░  40%    Storage backend pending
  Port Communication                ██████████ 100%    OCaml ↔ Elixir bridge active
  Test Proving Ground               ██████████ 100%    zotero-voyant-export case

REPO INFRASTRUCTURE
  Justfile                          ██████████ 100%    Language-agnostic build tasks
  .machine_readable/                ██████████ 100%    STATE.a2ml tracking
  Documentation (Research)          ██████████ 100%    6 detailed tech reports

─────────────────────────────────────────────────────────────────────────────
OVERALL:                            ███████░░░  ~70%   Infrastructure complete, integrating

Key Dependencies

Parser (OCaml) ───► Orchestrator ───► Analytics (Julia)
                        │                 │
                        ▼                 ▼
                  Reasoning ───────► Virtuoso (RDF) ──────► Visualization

Update Protocol

This file is maintained by both humans and AI agents. When updating:

  1. After completing a component: Change its bar and percentage

  2. After adding a component: Add a new row in the appropriate section

  3. After architectural changes: Update the ASCII diagram

  4. Date: Update the Last updated comment at the top of this file

Progress bars use: █ (filled) and ░ (empty), 10 characters wide. Percentages: 0%, 10%, 20%, … 100% (in 10% increments).