realfreq/.github/workflows/c-cpp.yml at main · imsuneth/realfreq · GitHub

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name: C/C++ CI

on:
  push:
    branches: [ '*' ]
  pull_request:
    branches: [ '*' ]

env:
  ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION: true

jobs:
  ubuntu_14:
    name: Ubuntu 14
    runs-on: ubuntu-22.04
    container:
      image: ubuntu:14.04
      volumes:
        - /node20217:/node20217:rw,rshared
        - /node20217:/__e/node20:ro,rshared
    steps:
      - name: install packages
        run: sudo apt-get update && sudo apt-get install -y zlib1g-dev gcc g++ autoconf automake make wget curl
      - name: nodejs
        run: |
          apt-get install -y wget xz-utils
          wget https://unofficial-builds.nodejs.org/download/release/v20.9.0/node-v20.9.0-linux-x64-glibc-217.tar.xz
          tar -xf node-v20.9.0-linux-x64-glibc-217.tar.xz --strip-components 1 -C /node20217
      - uses: actions/checkout@v2
      - name: install htslib
        run: ./scripts/install-hts.sh
      - name: test
        run: make test
  ubuntu_16:
    name: Ubuntu 16
    runs-on: ubuntu-22.04
    container:
      image: ubuntu:16.04
      volumes:
        - /node20217:/node20217:rw,rshared
        - /node20217:/__e/node20:ro,rshared
    steps:
      - name: install packages
        run: apt-get update && apt-get install -y zlib1g-dev gcc g++ autoconf automake make wget curl bzip2
      - name: nodejs
        run: |
          apt-get install -y wget xz-utils
          wget https://unofficial-builds.nodejs.org/download/release/v20.9.0/node-v20.9.0-linux-x64-glibc-217.tar.xz
          tar -xf node-v20.9.0-linux-x64-glibc-217.tar.xz --strip-components 1 -C /node20217
      - uses: actions/checkout@v2
      - name: install htslib
        run: ./scripts/install-hts.sh
      - name: test
        run: make test
  ubuntu_18:
    name: Ubuntu 18
    runs-on: ubuntu-22.04
    container:
      image: ubuntu:18.04
      volumes:
        - /node20217:/node20217:rw,rshared
        - /node20217:/__e/node20:ro,rshared
    steps:
      - name: Install sudo package
        run: apt update && apt install sudo
      - name: install packages
        run: sudo apt-get update && sudo apt-get install -y zlib1g-dev gcc g++ autoconf automake make wget curl
      - name: nodejs
        run: |
          apt-get install -y wget xz-utils
          wget https://unofficial-builds.nodejs.org/download/release/v20.9.0/node-v20.9.0-linux-x64-glibc-217.tar.xz
          tar -xf node-v20.9.0-linux-x64-glibc-217.tar.xz --strip-components 1 -C /node20217
      - uses: actions/checkout@v2
      - name: install htslib
        run: ./scripts/install-hts.sh
      - name: test
        run: make test
  ubuntu_20:
    name: Ubuntu 20
    runs-on: ubuntu-22.04
    container: ubuntu:20.04
    steps:
    - uses: actions/checkout@v2
    - name: Install sudo package
      run: apt update && apt install sudo
    - name: install packages
      run: sudo apt-get update && sudo apt-get install -y zlib1g-dev gcc g++ autoconf automake make wget curl
    - name: install htslib
      run: ./scripts/install-hts.sh
    - name: test
      run: make test
  ubuntu_22:
      name: Ubuntu 22
      runs-on: ubuntu-22.04
      steps:
      - uses: actions/checkout@v2
      - name: install packages
        run: sudo apt-get update && sudo apt-get install -y zlib1g-dev gcc g++ autoconf automake make wget curl
      - name: install htslib
        run: ./scripts/install-hts.sh
      - name: test
        run: make test
      - name: install valgrind
        run: sudo apt-get install -y valgrind
      - name: memtest
        run: make memtest
      - name: install clang
        run: sudo apt-get install -y clang
      - name: build-clang
        run: make clean && make CC=clang -j8
      - name: test-clang
        run: make test
  # ubuntu_20_icc:
  #   name: Ubuntu 20 icc
  #   runs-on: ubuntu-20.04
  #   steps:
  #   - uses: actions/checkout@v2
  #     with:
  #       submodules: recursive
  #   - name: Intel Apt repository
  #     timeout-minutes: 1
  #     run: |
  #       wget https://apt.repos.intel.com/intel-gpg-keys/GPG-PUB-KEY-INTEL-SW-PRODUCTS-2023.PUB
  #       sudo apt-key add GPG-PUB-KEY-INTEL-SW-PRODUCTS-2023.PUB
  #       rm GPG-PUB-KEY-INTEL-SW-PRODUCTS-2023.PUB
  #       echo "deb https://apt.repos.intel.com/oneapi all main" | sudo tee /etc/apt/sources.list.d/oneAPI.list
  #       sudo apt-get update
  #   - name: install packages
  #     run: sudo apt-get install -y zlib1g-dev libzstd-dev intel-oneapi-compiler-dpcpp-cpp-and-cpp-classic
  #   - name: install htslib
  #     run: ./scripts/install-hts.sh
  #   - name: Setup Intel oneAPI environment
  #     run: |
  #       source /opt/intel/oneapi/setvars.sh
  #       printenv >> $GITHUB_ENV
  #   - name: build
  #     run: make CC=icc -j8
  #   - name: test
  #     run: make test
  # os_x_11: # deprecated
  #   name: OSX 11
  #   runs-on: macos-11
  #   steps:
  #   - uses: actions/checkout@v2
  #   - name: install htslib
  #     run: ./scripts/install-hts.sh
  #   - name: build
  #     run: make -j8
  #   - name: test
  #     run: make test
  # os_x_12: # deprecated
  #   name: OSX 12
  #   runs-on: macos-12
  #   steps:
  #   - uses: actions/checkout@v2
  #   - name: install htslib
  #     run: ./scripts/install-hts.sh
  #   - name: build
  #     run: make -j8
  #   - name: test
  #     run: make test
  os_x_14:
    name: OSX 14
    runs-on: macos-14
    steps:
    - uses: actions/checkout@v2
    - name: install htslib
      run: ./scripts/install-hts.sh
    - name: build
      run: make -j8
    - name: test
      run: make test
  arm64:
    name: ubuntu arm
    runs-on: ubuntu-latest
    steps:
    - run: docker run --rm --privileged multiarch/qemu-user-static:register --reset
    - uses: docker://multiarch/ubuntu-core:arm64-bionic
      with:
        args: 'uname -a'
    - uses: actions/checkout@v1
    - uses: docker://multiarch/ubuntu-core:arm64-bionic
      with:
        args: >
          bash -c "apt-get update &&
          apt-get install -y zlib1g-dev gcc make wget curl &&
          ldd --version && gcc --version &&
          ./scripts/install-hts.sh && make && make test"