In get_chromosomes_from_ensebml
|
def get_chromosomes_from_ensembl(rsids): |
Problem:
We currently do one request per RSID and parse the json in a not-so-good way.
We can improve this method by:
1- Using a combined request to ensembl.org REST API.
2- Checking the json response properly.
Todo:
In
get_chromosomes_from_ensebmlhipsnp/hipsnp/hipsnp.py
Line 634 in 76963bf
Problem:
We currently do one request per RSID and parse the json in a not-so-good way.
We can improve this method by:
1- Using a combined request to ensembl.org REST API.
2- Checking the json response properly.
Todo:
variation/human/(https://rest.ensembl.org/documentation/info/variation_id) for a POST request to (https://rest.ensembl.org/documentation/info/variation_post)