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678 lines (644 loc) · 20.5 KB
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// ##################################################
// # error.c - finally revised on Dec 2018 #
// # coded by Taeyoon Kim #
// # Copyright (C) 2005 - 2018, Taeyoon Kim, #
// # All rights reserved. #
// ##################################################
// This file contains functions checking and recording errors.
// Record the kind of an error in the file, "Error".
void RecordError(int kind) {
FILE *fErr;
char fn[80];
sprintf(fn, "Error_%d", rank);
fErr = fopen(GenFileName(fn), "a");
fprintf(fErr, "\ncurrTimeStep : %lld\n", currTimeStep);
fprintf(fErr, "rank : %d\n", rank);
switch (kind) {
case 1 :
fprintf(fErr, "Repulsive force between actins\n");
break;
case 2 :
fprintf(fErr, "Repulsive between ABPs\n");
break;
case 3 :
fprintf(fErr, "Repulsive force between actin and ABP\n");
break;
case 4 :
fprintf(fErr, "Spring force between actins\n");
break;
case 5 :
fprintf(fErr, "Spring between actin and ABP\n");
break;
case 6 :
fprintf(fErr, "Bending force for actin filaments\n");
break;
case 7 :
fprintf(fErr, "Bending force for actin-ABP-actin\n");
break;
case 8 :
fprintf(fErr, "Bending force for right angle between actin and ABP\n");
break;
case 9 :
fprintf(fErr, "Force for cross-linking angle\n");
break;
case 10 :
fprintf(fErr, "Total force on actin\n");
break;
case 11 :
fprintf(fErr, "Total force on ABP\n");
break;
case 12 :
fprintf(fErr, "Spring force on the backbone of motors\n");
break;
case 13 :
fprintf(fErr, "Bending force on the backbone of motors\n");
break;
case 14 :
fprintf(fErr, "Spring force between membranes\n");
break;
case 15 :
fprintf(fErr, "Spring force between membrane and actin\n");
break;
case 16 :
fprintf(fErr, "Spring force between membrane and space\n");
break;
case 17 :
fprintf(fErr, "Bending force for membranes\n");
break;
case 18 :
fprintf(fErr, "Total force on membrane\n");
break;
}
fclose(fErr);
}
// Subroutine for functions recording errors
void RecordErrorArrayInt(FILE *fOut, const char *name, int ind,
int *arr, int cnt) {
fprintf(fOut, "%s of %d: ", name, ind);
Fprintf1dArrayInt(fOut, arr, cnt, 0);
}
// Subroutine for functions recording errors
void RecordErrorArrayDouble(FILE *fOut, const char *name, int ind, double *arr,
int cnt) {
fprintf(fOut, "%s of %d: ", name, ind);
Fprintf1dArrayDouble(fOut, arr, cnt, 0);
}
void RecordErrorSubroutine1(FILE *fErr, int ind) {
if (iAct[ind] > -1) {
RecordErrorArrayInt(fErr, "act.ch", ind, &P2A(act.ch,iAct[ind],0,nChAc),
nChAc);
RecordErrorArrayDouble(fErr, "act.r", ind, &P2(act.r,iAct[ind],0), NDIM);
}
else {
fprintf(fErr, "Actin %d doesn't exist in the subdomain!\n", ind);
}
fprintf(fErr, "\n");
}
void RecordErrorSubroutine2(FILE *fErr, int ind) {
if (iAbp[ind] > -1) {
RecordErrorArrayInt(fErr, "abp.ch", ind, &P2A(abp.ch,iAbp[ind],0,nChAb),
nChAb);
RecordErrorArrayDouble(fErr, "abp.r", ind, &P2(abp.r,iAbp[ind],0), NDIM);
}
else {
fprintf(fErr, "ABP %d doesn't exist in the subdomain!\n", ind);
}
fprintf(fErr, "\n");
}
void RecordErrorSubroutine3(FILE *fErr, int ind) {
if (iMb[ind] > -1) {
RecordErrorArrayInt(fErr, "memb.ch", ind, &P2A(memb.ch,iMb[ind],0,nChMb),
nChMb);
RecordErrorArrayDouble(fErr, "memb.r", ind, &P2(memb.r,iMb[ind],0), NDIM);
}
else {
fprintf(fErr, "Membrane %d doesn't exist in the subdomain!\n", ind);
}
fprintf(fErr, "\n");
}
// Record detailed information related to an error caused by spring force.
void RecordErrorSpringForce(int ind1, int ind2, double f, double len,
int mode) {
char fn[80];
FILE *fErr;
sprintf(fn, "Error_%d", rank);
fErr = fopen(GenFileName(fn), "a");
// A spring force between actins
if (mode == 0) {
fprintf(fErr, "Spring: actin %d (%d/%d) and actin %d (%d/%d)\n\n",
ind2, iAct[ind2], nActMe, ind1, iAct[ind1], nActMe);
RecordErrorSubroutine1(fErr, ind1);
RecordErrorSubroutine1(fErr, ind2);
}
// A spring force between actin and ABP
else if (mode == 1) {
fprintf(fErr, "Spring: ABP %d (%d/%d) and actin %d (%d/%d)\n\n",
ind2, iAbp[ind2], nAbpMe, ind1, iAct[ind1], nActMe);
RecordErrorSubroutine2(fErr, ind2);
RecordErrorSubroutine1(fErr, ind1);
RecordErrorSubroutine1(fErr, P2A(act.ch,iAct[ind1],0,nChAc));
}
// A spring force between ABPs
else if (mode == 2) {
fprintf(fErr, "Spring: ABP %d (%d/%d) and ABP %d (%d/%d)\n\n",
ind2, iAbp[ind2], nAbpMe, ind1, iAbp[ind1], nAbpMe);
RecordErrorSubroutine2(fErr, ind2);
RecordErrorSubroutine2(fErr, ind1);
}
// A spring force between membranes
else if (mode == 3) {
fprintf(fErr, "Spring: membrane %d (%d/%d) and membrane %d (%d/%d)\n\n",
ind1, iMb[ind1], nMbMe, ind2, iMb[ind2], nMbMe);
RecordErrorSubroutine3(fErr, ind1);
RecordErrorSubroutine3(fErr, ind2);
}
// A spring force between membrane and actin
else if (mode == 4) {
fprintf(fErr, "Spring: membrane %d (%d/%d) and actin %d (%d/%d)\n\n",
ind1, iMb[ind1], nMbMe, ind2, iAct[ind2], nActMe);
RecordErrorSubroutine3(fErr, ind1);
RecordErrorSubroutine1(fErr, ind2);
}
// A spring force between membrane and space
else {
fprintf(fErr, "Spring: membrane %d (%d/%d) and space\n\n",
ind1, iMb[ind1], nMbMe);
RecordErrorSubroutine3(fErr, ind1);
}
fprintf(fErr, "Force = %g\n", f);
fprintf(fErr, "Length = %g\n", len);
fclose(fErr);
}
// Record detailed information related to an error caused by repulsive force.
void RecordErrorRepForce(int *ind, int *nlPnt, double (*rPnt)[NDIM],
double f, double dist, double *ratio, int mode) {
int n, k, neighInd[2], *pArr[2];
char fn[80];
FILE *fErr;
sprintf(fn, "Error_%d", rank);
fErr = fopen(GenFileName(fn), "a");
if (mode < 3) {
fprintf(fErr, "Repulsive: ");
for(n = 0; n < 2; n++) {
if (nlPnt[n] < nAct) {
fprintf(fErr, "actin segment %d", nlPnt[n]);
pArr[n] = &P2A(act.cyl.l,nlPnt[n],0,2);
}
else {
fprintf(fErr, "ABP %d", nlPnt[n] - nAct);
}
if (n == 0) {
fprintf(fErr, " and ");
}
else {
fprintf(fErr, "\n\n");
}
}
for(n = 0; n < 2; n++) {
if (nlPnt[n] < nAct) {
fprintf(fErr, "actin segment %d: %d (%d/%d) %d (%d/%d)\n\n",
nlPnt[n], ((ind[2 * n] > -1) ? act.id[ind[2 * n]] : -1),
ind[2 * n], nActMe, ((ind[2 * n + 1] > -1) ?
act.id[ind[2 * n + 1]] : -1), ind[2 * n + 1], nActMe);
for(k = 0; k < 2; k++) {
RecordErrorSubroutine1(fErr, act.id[ind[2 * n + k]]);
}
fprintf(fErr, "Ratio = %g\n", ratio[n]);
}
else {
fprintf(fErr, "ABP: %d (%d/%d)\n", nlPnt[n] - nAct,
ind[dimMbNuc * n], nAbpMe);
RecordErrorSubroutine2(fErr, nlPnt[n] - nAct);
}
}
}
else {
if (nlPnt[0] < nAct + nAbp + nUnitMb) {
neighInd[0] = nlPnt[0] - nAct - nAbp;
fprintf(fErr, "Repulsive: membrane segment %d and ", neighInd[0]);
pArr[0] = &P2A(memb.unit.l,neighInd[0],0,dimMbNuc);
}
else {
neighInd[0] = nlPnt[0] - nAct - nAbp - nUnitMb;
fprintf(fErr, "Repulsive: copied membrane segment %d and ",
neighInd[0]);
pArr[0] = &P2A(memb.unitCp.l,neighInd[0],0,dimMbNuc);
}
if (mode == 4) {
fprintf(fErr, "actin segment %d\n\n", nlPnt[1]);
pArr[1] = &P2A(act.cyl.l,nlPnt[1],0,2);
}
else if (mode == 3) {
neighInd[1] = nlPnt[1] - nAct;
fprintf(fErr, "ABP %d\n\n", neighInd[1]);
}
else {
if (nlPnt[1] < nAct + nAbp + nUnitMb) {
neighInd[1] = nlPnt[1] - nAct - nAbp;
fprintf(fErr, "membrane segment %d\n", neighInd[1]);
pArr[1] = &P2A(memb.unit.l,neighInd[1],0,dimMbNuc);
}
else {
neighInd[1] = nlPnt[1] - nAct - nAbp - nUnitMb;
fprintf(fErr, "copied membrane segment %d\n", neighInd[1]);
pArr[1] = &P2A(memb.unitCp.l,neighInd[1],0,dimMbNuc);
}
}
fprintf(fErr, "membrane segment %d: ", neighInd[0]);
for(k = 0; k < dimMbNuc; k++) {
fprintf(fErr, "%d (%d/%d) ", pArr[0][k], ind[k], nMbMe);
}
fprintf(fErr, "\n");
for(k = 0; k < dimMbNuc; k++) {
RecordErrorSubroutine3(fErr, pArr[0][k]);
}
if (mode == 4) {
fprintf(fErr, "actin segment %d: ", nlPnt[1]);
for(k = 0; k < 2; k++) {
fprintf(fErr, "%d (%d/%d) ", pArr[1][k], ind[dimMbNuc + k], nActMe);
}
fprintf(fErr, "\n");
for(k = 0; k < 2; k++) {
RecordErrorSubroutine1(fErr, pArr[1][k]);
}
}
else if (mode == 3) {
fprintf(fErr, "ABP: %d (%d/%d)\n", nlPnt[1] - nAct, ind[dimMbNuc],
nAbpMe);
RecordErrorSubroutine2(fErr, nlPnt[1] - nAct);
}
else {
fprintf(fErr, "membrane segment %d: ", neighInd[1]);
for(k = 0; k < dimMbNuc; k++) {
fprintf(fErr, "%d (%d/%d) ", pArr[1][k], ind[dimMbNuc + k], nMbMe);
}
fprintf(fErr, "\n");
for(k = 0; k < dimMbNuc; k++) {
RecordErrorSubroutine3(fErr, pArr[1][k]);
}
}
if (mode == 3 && dimMbNuc == 2) {
fprintf(fErr, "Ratio = %g\n", ratio[0]);
}
else if (((mode == 4 || mode == 5) && dimMbNuc == 2)
|| (mode == 3 && dimMbNuc == 3)) {
fprintf(fErr, "Ratio = %g\t%g\n", ratio[0], ratio[1]);
}
else if (mode == 4 && dimMbNuc == 3) {
fprintf(fErr, "Ratio = %g\t%g\t%g\n", ratio[0], ratio[1], ratio[2]);
}
else {
fprintf(fErr, "Ratio = %g\t%g\t%g\t%g\n", ratio[0], ratio[1], ratio[2],
ratio[3]);
}
}
fprintf(fErr, "Force = %g\n", f);
fprintf(fErr, "Distance = %g\n", dist);
fclose(fErr);
}
// Record detailed information related to an error caused by bending force.
void RecordErrorBendingForce(int ind1, int ind2, int ind3, double f, int mode) {
char fn[80];
FILE *fErr;
sprintf(fn, "Error_%d", rank);
fErr = fopen(GenFileName(fn), "a");
switch (mode) {
case 0:
fprintf(fErr, "Filament bending: actin %d (%d/%d), actin "
"%d (%d/%d), actin %d (%d/%d)\n\n", ind1, iAct[ind1], nActMe,
ind2, iAct[ind2], nActMe, ind3, iAct[ind3], nActMe);
break;
case 1:
fprintf(fErr, "ABP bending: actin %d (%d/%d), ABP %d (%d/%d), "
"actin %d (%d/%d)\n\n", ind2, iAct[ind2], nActMe,
ind1, iAbp[ind1], nAbpMe, ind3, iAct[ind3], nActMe);
break;
case 2:
fprintf(fErr, "Crosslink angle: ABP %d (%d/%d), actin %d (%d/%d), "
"actin %d (%d/%d)\n\n", ind1, iAbp[ind1], nAbpMe,
ind2, iAct[ind2], nActMe, ind3, iAct[ind3], nActMe);
break;
case 3:
fprintf(fErr, "90-angle bending: ABP %d (%d/%d), actin %d (%d/%d), "
"actin %d (%d/%d)\n\n", ind1, iAbp[ind1], nAbpMe,
ind2, iAct[ind2], nActMe, ind3, iAct[ind3], nActMe);
break;
case 4:
fprintf(fErr, "Motor backbone bending: ABP %d (%d/%d), ABP %d (%d/%d), "
"ABP %d (%d/%d)\n\n", ind2, iAbp[ind2], nAbpMe,
ind1, iAbp[ind1], nAbpMe, ind3, iAbp[ind3], nAbpMe);
break;
case 5:
fprintf(fErr, "Membrane bending: membrane %d (%d/%d), membrane %d "
"(%d/%d), membrane %d (%d/%d)\n\n", ind1, iMb[ind1], nMbMe,
ind2, iMb[ind2], nMbMe, ind3, iMb[ind3], nMbMe);
break;
}
if (mode < 4) {
if (mode == 0) {
RecordErrorSubroutine1(fErr, ind1);
}
else {
RecordErrorSubroutine2(fErr, ind1);
}
RecordErrorSubroutine1(fErr, ind2);
RecordErrorSubroutine1(fErr, ind3);
}
else if (mode == 4) {
RecordErrorSubroutine2(fErr, ind1);
RecordErrorSubroutine2(fErr, ind2);
RecordErrorSubroutine2(fErr, ind3);
}
else {
RecordErrorSubroutine3(fErr, ind1);
RecordErrorSubroutine3(fErr, ind2);
RecordErrorSubroutine3(fErr, ind3);
}
fprintf(fErr, "Force = %g\n", f);
fclose(fErr);
}
void RecordErrorTotalForceSubroutine1(FILE *fErr, int ind1) {
int ind2;
if (ind1 > -1) {
ind2 = iAct[ind1];
if (ind2 > -1) {
fprintf(fErr, "actin %d (%d/%d):\n", ind1, ind2, nActMe);
RecordErrorArrayInt(fErr, "act.ch", ind1, &P2A(act.ch,ind2,0,nChAc),
nChAc);
RecordErrorArrayDouble(fErr, "act.r", ind1, &P2(act.r,ind2,0), NDIM);
RecordErrorArrayDouble(fErr, "act.f", ind1, &P2(act.f,ind2,0), NDIM);
fprintf(fErr, "fixAct = %d\n", act.fix[ind2]);
}
else {
fprintf(fErr, "Actin %d doesn't exist in the subdomain!\n", ind1);
}
fprintf(fErr, "\n");
}
}
void RecordErrorTotalForceSubroutine2(FILE *fErr, int ind1) {
int ind2;
if (ind1 > -1) {
ind2 = iAbp[ind1];
fprintf(fErr, "ABP %d (%d/%d):\n", ind1, ind2, nAbpMe);
if (ind2 > -1) {
RecordErrorArrayInt(fErr, "abp.ch", ind1, &P2A(abp.ch,ind2,0,nChAb),
nChAb);
RecordErrorArrayDouble(fErr, "abp.r", ind1, &P2(abp.r,ind2,0), NDIM);
RecordErrorArrayDouble(fErr, "abp.f", ind1, &P2(abp.f,ind2,0), NDIM);
}
else {
fprintf(fErr, "ABP %d doesn't exist in the subdomain!\n", ind1);
}
fprintf(fErr, "\n");
}
}
void RecordErrorTotalForceSubroutine3(FILE *fErr, int ind1) {
int ind2;
if (ind1 > -1) {
ind2 = iMb[ind1];
fprintf(fErr, "membrane %d (%d/%d):\n", ind1, ind2, nMbMe);
if (ind2 > -1) {
RecordErrorArrayInt(fErr, "memb.ch", ind1, &P2A(memb.ch,ind2,0,nChMb),
nChMb);
RecordErrorArrayDouble(fErr, "memb.r", ind1, &P2(memb.r,ind2,0), NDIM);
RecordErrorArrayDouble(fErr, "memb.f", ind1, &P2(memb.f,ind2,0), NDIM);
}
else {
fprintf(fErr, "Membrane %d doesn't exist in the subdomain!\n", ind1);
}
fprintf(fErr, "\n");
}
}
// Record detailed information related to an error caused by total force.
void RecordErrorTotalForce(int ind, int mode) {
int ind2, k;
FILE *fErr;
char fn[80];
sprintf(fn, "Error_%d", rank);
fErr = fopen(GenFileName(fn), "a");
fprintf(fErr, "Total force: ");
if (mode == 0) {
RecordErrorTotalForceSubroutine1(fErr, ind);
fprintf(fErr, "\n---- Bound on the actin ----\n");
for(k = 0; k < 2; k++) {
ind2 = P2A(act.ch,iAct[ind],k,nChAc);
RecordErrorTotalForceSubroutine1(fErr, ind2);
}
for(k = 2; k < nChAc; k++) {
ind2 = P2A(act.ch,iAct[ind],k,nChAc);
RecordErrorTotalForceSubroutine2(fErr, ind2);
}
}
else if (mode == 1) {
RecordErrorTotalForceSubroutine2(fErr, ind);
fprintf(fErr, "\n---- Bound on the ABP ----\n");
for(k = 0; k < nChAb; k++) {
CONT(k == 2);
ind2 = P2A(abp.ch,iAbp[ind],k,nChAb);
if (k < 2) {
RecordErrorTotalForceSubroutine1(fErr, ind2);
}
else {
RecordErrorTotalForceSubroutine2(fErr, ind2);
}
}
}
else {
RecordErrorTotalForceSubroutine3(fErr, ind);
fprintf(fErr, "\n---- Bound on the membrane ----\n");
for(k = 0; k < nChMb; k++) {
ind2 = P2A(memb.ch,iMb[ind],k,nChMb);
if (k < nChMb - nMbAct) {
RecordErrorTotalForceSubroutine3(fErr, ind2);
}
else {
RecordErrorTotalForceSubroutine1(fErr, ind2);
}
}
}
fclose(fErr);
}
void RecordErrorElement(int ind, int mode) {
int k, locInd, ind2;
if (mode == 0) {
locInd = iAct[ind];
printf("actin: %d (%d/%d)\n", ind, locInd, nActMe);
if (locInd > -1 && locInd < nActMe + nActCp) {
printf("act.r: %g\t%g\t%g\n", P2(act.r,locInd,0), P2(act.r,locInd,1),
P2(act.r,locInd,2));
printf("act.f: %g\t%g\t%g\n", P2(act.f,locInd,0), P2(act.f,locInd,1),
P2(act.f,locInd,2));
for(k = 0; k < nChAc; k++) {
ind2 = P2A(act.ch,locInd,k,nChAc);
CONT(ind2 < 0);
if (k < 2) {
printf("%d: %d(%d/%d): ", k, ind2, iAct[ind2], nActMe);
if (iAct[ind2] > -1) {
printf("%g\t%g\t%g\t", P2(act.r,iAct[ind2],0),
P2(act.r,iAct[ind2],1), P2(act.r,iAct[ind2],2));
printf("%g\t%g\t%g\t", P2(act.f,iAct[ind2],0),
P2(act.f,iAct[ind2],1), P2(act.f,iAct[ind2],2));
}
printf("\n");
}
else {
printf("%d: %d(%d/%d): ", k, ind2, iAbp[ind2], nAbpMe);
if (iAbp[ind2] > -1) {
printf("%g\t%g\t%g\t", P2(abp.r,iAbp[ind2],0),
P2(abp.r,iAbp[ind2],1), P2(abp.r,iAbp[ind2],2));
printf("%g\t%g\t%g\t", P2(abp.f,iAbp[ind2],0),
P2(abp.f,iAbp[ind2],1), P2(abp.f,iAbp[ind2],2));
}
printf("\n");
}
}
}
}
else if (mode == 1) {
locInd = iAbp[ind];
printf("ABP: %d (%d/%d)\n", ind, locInd, nAbpMe);
if (locInd > -1 && locInd < nAbpMe + nAbpCp) {
printf("abp.r: %g\t%g\t%g\n", P2(abp.r,locInd,0), P2(abp.r,locInd,1),
P2(abp.r,locInd,2));
printf("abp.f: %g\t%g\t%g\n", P2(abp.f,locInd,0), P2(abp.f,locInd,1),
P2(abp.f,locInd,2));
for(k = 0; k < nChAb; k++) {
ind2 = P2A(abp.ch,locInd,k,nChAb);
CONT(ind2 < 0 || k == 2);
if (k < 2) {
printf("%d: %d(%d/%d): ", k, ind2, iAct[ind2], nActMe);
if (iAct[ind2] > -1) {
printf("%g\t%g\t%g\t", P2(act.r,iAct[ind2],0),
P2(act.r,iAct[ind2],1), P2(act.r,iAct[ind2],2));
printf("%g\t%g\t%g\t", P2(act.f,iAct[ind2],0),
P2(act.f,iAct[ind2],1), P2(act.f,iAct[ind2],2));
}
printf("\n");
}
else {
printf("%d: %d(%d/%d): ", k, ind2, iAbp[ind2], nAbpMe);
if (iAbp[ind2] > -1) {
printf("%g\t%g\t%g\t", P2(abp.r,iAbp[ind2],0),
P2(abp.r,iAbp[ind2],1), P2(abp.r,iAbp[ind2],2));
printf("%g\t%g\t%g\t", P2(abp.f,iAbp[ind2],0),
P2(abp.f,iAbp[ind2],1), P2(abp.f,iAbp[ind2],2));
}
printf("\n");
}
}
}
}
else {
locInd = iMb[ind];
printf("membrane: %d (%d/%d)\n", ind, locInd, nMbMe);
if (locInd > -1 && locInd < nMbMe + nMbCp) {
printf("memb.idx: %d\n", memb.idx[locInd]);
printf("memb.r: %g\t%g\t%g\n", P2(memb.r,locInd,0), P2(memb.r,locInd,1),
P2(memb.r,locInd,2));
printf("memb.f: %g\t%g\t%g\n", P2(memb.f,locInd,0), P2(memb.f,locInd,1),
P2(memb.f,locInd,2));
for(k = 0; k < nChMb; k++) {
ind2 = P2A(memb.ch,locInd,k,nChMb);
CONT(ind2 < 0);
if (k < 2) {
printf("%d: %d(%d/%d): ", k, ind2, iMb[ind2], nMbMe);
if (iMb[ind2] > -1) {
printf("%g\t%g\t%g\t", P2(memb.r,iMb[ind2],0),
P2(memb.r,iMb[ind2],1), P2(memb.r,iMb[ind2],2));
printf("%g\t%g\t%g\t", P2(memb.f,iMb[ind2],0),
P2(memb.f,iMb[ind2],1), P2(memb.f,iMb[ind2],2));
}
printf("\n");
}
else {
printf("%d: %d(%d/%d): ", k, ind2, iAct[ind2], nActMe);
if (iAct[ind2] > -1) {
printf("%g\t%g\t%g\t", P2(act.r,iAct[ind2],0),
P2(act.r,iAct[ind2],1), P2(act.r,iAct[ind2],2));
printf("%g\t%g\t%g\t", P2(act.f,iAct[ind2],0),
P2(act.f,iAct[ind2],1), P2(act.f,iAct[ind2],2));
}
printf("\n");
}
}
}
}
}
// Check large forces beyond "magUnstF".
int CheckLargeForce(double f, int kind) {
int chkErr = 1;
if (fabs(f) > magUnstF) {
Printf("Error: too large force is produced.\n");
Printf("currTimeStep: %d, rank %d, force: %lf\n", currTimeStep, rank, f);
stopSig = 1;
RecordError(kind);
chkErr = -1;
}
if (isnan(f) != 0) {
Printf("Error: some force has a 'nan' value.\n");
Printf("currTimeStep: %d, rank %d, force: nan\n", currTimeStep, rank);
stopSig = 1;
chkErr = -1;
}
return chkErr;
}
void CheckLargeTotalForceAll(int mode) {
int n;
for(n = 0; n < nActMe; n++) {
CONT(!(fabs(P2(act.f,n,0)) > magUnstF));
printf("Large force!\n");
printf("mode = %d\n, rank = %d, currTimeStep = %lld\n", mode, rank,
currTimeStep);
RecordErrorElement(act.id[n], 0);
exit(-1);
}
for(n = 0; n < nAbpMe; n++) {
CONT(!(fabs(P2(abp.f,n,0)) > magUnstF));
printf("Large force!\n");
printf("mode = %d\n", mode);
printf("rank = %d, currTimeStep = %lld\n", rank, currTimeStep);
RecordErrorElement(abp.id[n], 1);
exit(-1);
}
for(n = 0; n < nMbMe; n++) {
CONT(!(fabs(P2(memb.f,n,0)) > magUnstF));
printf("Large force!\n");
printf("mode = %d\n", mode);
printf("rank = %d, currTimeStep = %lld\n", rank, currTimeStep);
RecordErrorElement(memb.id[n], 2);
exit(-1);
}
}
void CheckNanForce(int mode) {
int n, k, ind;
FOR_ACTME(n) {
CONT(!(isnan(P2(act.r,n,0)) != 0 || isnan(P2(act.r,n,1)) != 0
|| isnan(P2(act.r,n,2)) != 0 || isnan(P2(act.f,n,0)) != 0
|| isnan(P2(act.f,n,1)) != 0 || isnan(P2(act.f,n,2)) != 0));
printf("NaN force!\n");
printf("mode = %d\n, rank = %d, currTimeStep = %lld\n", mode, rank,
currTimeStep);
RecordErrorElement(act.id[n], 0);
exit(-1);
}
FOR_ABPME(n) {
CONT(!(isnan(P2(abp.r,n,0)) != 0 || isnan(P2(abp.r,n,1)) != 0
|| isnan(P2(abp.r,n,2)) != 0 || isnan(P2(abp.f,n,0)) != 0
|| isnan(P2(abp.f,n,1)) != 0 || isnan(P2(abp.f,n,2)) != 0));
printf("NaN force!\n");
printf("mode = %d\n, rank = %d, currTimeStep = %lld\n", mode, rank,
currTimeStep);
RecordErrorElement(abp.id[n], 1);
exit(-1);
}
FOR_MBME(n) {
CONT(!(isnan(P2(memb.r,n,0)) != 0 || isnan(P2(memb.r,n,1)) != 0
|| isnan(P2(memb.r,n,2)) != 0 || isnan(P2(memb.f,n,0)) != 0
|| isnan(P2(memb.f,n,1)) != 0 || isnan(P2(memb.f,n,2)) != 0));
printf("NaN force!\n");
printf("mode = %d\n, rank = %d, currTimeStep = %lld\n", mode, rank,
currTimeStep);
RecordErrorElement(memb.id[n], 2);
exit(-1);
}
}