AOT build is broken after packages upgrade

[lx93uv]

updated package.json:

{
  "name": "angular2-starter",
  "version": "0.2.5",
  "license": "MIT",
  "repository": {
    "type": "git",
    "url": "https://github.com/mirkonasato/angular2-course-webpack-starter.git"
  },
  "private": true,
  "scripts": {
    "build": "webpack --progress",
    "build:prod": "cross-env APP_ENVIRONMENT=production webpack -p --progress",
    "postinstall": "typings install",
    "serve": "webpack-dev-server --inline --progress"
  },
  "dependencies": {
    "@angular/common": "^4.0.3",
    "@angular/compiler": "^4.0.3",
    "@angular/compiler-cli": "^4.0.3",
    "@angular/core": "^4.0.3",
    "@angular/forms": "^4.0.3",
    "@angular/http": "^4.0.3",
    "@angular/platform-browser": "^4.0.3",
    "@angular/platform-browser-dynamic": "^4.0.3",
    "@angular/platform-server": "^4.0.3",
    "@angular/router": "^4.0.3",
    "core-js": "^2.4.1",
    "rxjs": "^5.3.0",
    "zone.js": "^0.8.8"
  },
  "devDependencies": {
    "@ngtools/webpack": "^1.3.0",
    "angular2-template-loader": "^0.6.2",
    "cross-env": "^4.0.0",
    "enhanced-resolve": "^3.1.0",
    "html-webpack-plugin": "^2.28.0",
    "raw-loader": "^0.5.1",
    "rimraf": "^2.6.1",
    "ts-loader": "^2.0.3",
    "typescript": "^2.2.2",
    "typings": "^2.1.1",
    "webpack": "^2.4.1",
    "webpack-dev-server": "^2.4.3"
  }
}

After npm run build:prod:

ERROR in /home/lx93uv/hub/angular2-course-webpack-starter/src/typings.d.ts (5,18): Duplicate identifier 'require'.

ERROR in /home/lx93uv/hub/angular2-course-webpack-starter/node_modules/@types/node/index.d.ts (73,13): Duplicate identifier 'require'.

ERROR in Could not resolve "./src/app/app.module" from "./src/app/app.module".
Child src/app/app.component.html:
       [0] ./src/app/app.component.html 49 bytes {0} [built]
Child html-webpack-plugin for "index.html":
       [0] ./~/html-webpack-plugin/lib/loader.js!./src/index.html 196 bytes {0} [built]
Child src/app/app.component.css:
       [0] ./src/app/app.component.css 47 bytes {0} [built]

npm ERR! Linux 4.9.0-2-amd64
npm ERR! argv "/usr/bin/nodejs" "/usr/bin/npm" "run" "build:prod"
npm ERR! node v7.9.0
npm ERR! npm  v4.2.0
npm ERR! code ELIFECYCLE
npm ERR! errno 2
npm ERR! angular2-starter@0.2.5 build:prod: `cross-env APP_ENVIRONMENT=production webpack -p --progress`
npm ERR! Exit status 2
npm ERR!
npm ERR! Failed at the angular2-starter@0.2.5 build:prod script 'cross-env APP_ENVIRONMENT=production webpack -p --progress'.
npm ERR! Make sure you have the latest version of node.js and npm installed.
npm ERR! If you do, this is most likely a problem with the angular2-starter package,
npm ERR! not with npm itself.
npm ERR! Tell the author that this fails on your system:
npm ERR!     cross-env APP_ENVIRONMENT=production webpack -p --progress
npm ERR! You can get information on how to open an issue for this project with:
npm ERR!     npm bugs angular2-starter
npm ERR! Or if that isn't available, you can get their info via:
npm ERR!     npm owner ls angular2-starter
npm ERR! There is likely additional logging output above.

npm ERR! Please include the following file with any support request:
npm ERR!     /home/lx93uv/.npm/_logs/2017-04-22T16_35_27_098Z-debug.log

Can you help to fix it?

[lx93uv]

Also here

"You need do nothing to get typings files for library packages that include d.ts files. Angular packages include them already."