Sync MDDB database #20
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| name: Sync MDDB database | |
| on: | |
| # Run this workflow every time there is a push with changes under the stated directory | |
| push: | |
| paths: | |
| - 'src/mddb-database/**' | |
| branches: [ master ] | |
| # Allow also to manually run the workflow from github for debugging purposes | |
| workflow_dispatch: | |
| inputs: | |
| debug: | |
| type: boolean | |
| description: 'Open an interactive sesion' | |
| default: true | |
| required: false | |
| permissions: | |
| contents: write | |
| jobs: | |
| sync-to-common-repo: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Checkout code | |
| uses: actions/checkout@v4 | |
| with: | |
| fetch-depth: 0 | |
| token: ${{ secrets.MDDB_REPOS }} | |
| ref: master | |
| - name: Configure Git | |
| run: | | |
| git config user.name "CI Bot" | |
| git config user.email "ci@example.com" | |
| - name: Extract changes in MDDB database code | |
| id: split | |
| run: | | |
| # Make sure we are in the right commit | |
| echo "Current commit: $(git rev-parse HEAD)" | |
| echo "Current branch: $(git branch --show-current)" | |
| # Make sure the directory exists | |
| echo "Current directory: $(ls -d src/mddb-database/ || echo "Directory does not exist")" | |
| # git subtree split extract only commits under src/mddb-database/ and creates a temporal branch with clean history | |
| # The command 'git subtree split' creates a new temporal commit which contains changes only under the subtree directory | |
| # Therefore this commit is not visible neither in the repo history | |
| SUBTREE_COMMIT=$(git subtree split --prefix=src/mddb-database) | |
| echo $SUBTREE_COMMIT | |
| echo "subtree_commit=$SUBTREE_COMMIT" >> $GITHUB_OUTPUT | |
| echo "📦 Extracted commit: $SUBTREE_COMMIT" | |
| - name: Open debug session | |
| uses: mxschmitt/action-tmate@v3 | |
| if: ${{ github.event_name == 'workflow_dispatch' && inputs.debug }} | |
| env: | |
| MDDB_REPOS: ${{ secrets.MDDB_REPOS }} | |
| - name: Push to MDDB database repo | |
| if: steps.split.outputs.subtree_commit != '' | |
| env: | |
| MDDB_REPOS: ${{ secrets.MDDB_REPOS }} | |
| run: | | |
| git push https://x-access-token:${MDDB_REPOS}@github.com/mmb-irb/mddb-database.git \ | |
| ${{ steps.split.outputs.subtree_commit }}:master --force | |
| echo "✅ MDDB database updated" |