From 3d5f06420ba0a1c42c79a46b82cbd0929a5ffa4e Mon Sep 17 00:00:00 2001 From: Victor Lin Date: Tue, 2 Jun 2026 11:41:08 -0700 Subject: [PATCH] Sync scheduled workflows list Some new scheduled workflows have been added since this list was last updated. The list was generated programmatically using: gh api "search/code?q=org:nextstrain+path:.github/workflows+schedule&per_page=100" | \ jq -r '.items[] | " - { repo: \(.repository.name),\(" " * (21 - (.repository.name | length)))workflow: \(.name) }"' | \ LC_ALL=C sort -f --- .github/workflows/keep-workflows-enabled.yaml | 83 ++++++++++--------- 1 file changed, 44 insertions(+), 39 deletions(-) diff --git a/.github/workflows/keep-workflows-enabled.yaml b/.github/workflows/keep-workflows-enabled.yaml index 11b5799..9a3ca62 100644 --- a/.github/workflows/keep-workflows-enabled.yaml +++ b/.github/workflows/keep-workflows-enabled.yaml @@ -24,45 +24,50 @@ jobs: fail-fast: false matrix: include: - - { repo: .github, workflow: keep-workflows-enabled.yaml } - - { repo: augur, workflow: ci.yaml } - - { repo: avian-flu, workflow: ingest-to-phylogenetic-ncbi.yaml } - - { repo: chikv, workflow: fetch-and-ingest.yaml } - - { repo: cli, workflow: ci.yaml } - - { repo: cli, workflow: standalone-installers.yaml } - - { repo: conda-base, workflow: installation.yaml } - - { repo: dengue, workflow: ingest-to-phylogenetic.yaml } - - { repo: ebola, workflow: ci.yaml } - - { repo: ebola, workflow: ingest-to-phylogenetic.yaml } - - { repo: forecasts-ncov, workflow: run-usa-models.yaml } - - { repo: forecasts-ncov, workflow: update-ncov-case-counts.yaml } - - { repo: hmpv, workflow: ingest.yaml } - - { repo: lassa, workflow: ci.yaml } - - { repo: lassa, workflow: ingest-to-phylogenetic.yaml } - - { repo: measles, workflow: ingest-to-phylogenetic.yaml } - - { repo: mpox, workflow: fetch-and-ingest.yaml } - - { repo: mumps, workflow: ingest.yaml } - - { repo: ncov, workflow: rebuild-100k.yml } - - { repo: ncov-ingest, workflow: fetch-and-ingest-genbank-master.yml } - # - { repo: nextclade_data, workflow: update-sars-cov-2-datasets.yml } intentionally disabled - - { repo: nextstrain.org, workflow: index-resources.yml } - - { repo: nextstrain.org, workflow: remind-to-promote.yml } - - { repo: nipah, workflow: ci.yaml } - - { repo: nipah, workflow: ingest.yaml } - - { repo: norovirus, workflow: ingest.yaml } - - { repo: oropouche, workflow: ingest.yaml } - - { repo: rabies, workflow: ingest-to-phylogenetic.yaml } - - { repo: rsv, workflow: fetch-and-ingest.yaml } - - { repo: rsv, workflow: rebuild.yaml } - - { repo: rubella, workflow: ingest.yaml } - - { repo: seasonal-cov, workflow: ingest.yaml } - - { repo: seasonal-flu, workflow: run-private-nextflu-builds.yaml } - - { repo: status, workflow: ci.yaml } - - { repo: tb, workflow: ingest-to-phylogenetic.yaml } - - { repo: WNV, workflow: ci.yaml } - - { repo: WNV, workflow: ingest-to-phylogenetic.yaml } - - { repo: yellow-fever, workflow: ingest.yaml } - - { repo: zika, workflow: ingest.yaml } + - { repo: .github, workflow: keep-workflows-enabled.yaml } + - { repo: augur, workflow: ci.yaml } + - { repo: augur, workflow: docs.yaml } + - { repo: auspice, workflow: docs.yaml } + - { repo: avian-flu, workflow: ingest-to-phylogenetic-ncbi.yaml } + - { repo: chikv, workflow: fetch-and-ingest.yaml } + - { repo: cli, workflow: ci.yaml } + - { repo: cli, workflow: docs.yaml } + - { repo: cli, workflow: standalone-installers.yaml } + - { repo: conda-base, workflow: installation.yaml } + - { repo: dengue, workflow: ingest-to-phylogenetic.yaml } + - { repo: docs.nextstrain.org, workflow: ci.yaml } + - { repo: ebola, workflow: ci.yaml } + - { repo: ebola, workflow: ingest-to-phylogenetic.yaml } + - { repo: forecasts-ncov, workflow: run-usa-models.yaml } + - { repo: forecasts-ncov, workflow: update-ncov-case-counts.yaml } + - { repo: hmpv, workflow: ingest.yaml } + - { repo: lassa, workflow: ci.yaml } + - { repo: lassa, workflow: ingest-to-phylogenetic.yaml } + - { repo: measles, workflow: ingest-to-phylogenetic.yaml } + - { repo: mpox, workflow: fetch-and-ingest.yaml } + - { repo: mumps, workflow: ingest.yaml } + - { repo: ncov, workflow: docs.yaml } + - { repo: ncov, workflow: rebuild-100k.yml } + - { repo: ncov-ingest, workflow: fetch-and-ingest-genbank-master.yml } + # - { repo: nextclade_data, workflow: update-sars-cov-2-datasets.yml } intentionally disabled + - { repo: nextstrain.org, workflow: index-resources.yml } + - { repo: nextstrain.org, workflow: remind-to-promote.yml } + - { repo: nipah, workflow: ci.yaml } + - { repo: nipah, workflow: ingest.yaml } + - { repo: norovirus, workflow: ingest.yaml } + - { repo: oropouche, workflow: ingest.yaml } + - { repo: rabies, workflow: ingest-to-phylogenetic.yaml } + - { repo: rsv, workflow: fetch-and-ingest.yaml } + - { repo: rsv, workflow: rebuild.yaml } + - { repo: rubella, workflow: ingest.yaml } + - { repo: seasonal-cov, workflow: ingest.yaml } + - { repo: seasonal-flu, workflow: run-private-nextflu-builds.yaml } + - { repo: status, workflow: ci.yaml } + - { repo: tb, workflow: ingest-to-phylogenetic.yaml } + - { repo: WNV, workflow: ci.yaml } + - { repo: WNV, workflow: ingest-to-phylogenetic.yaml } + - { repo: yellow-fever, workflow: ingest.yaml } + - { repo: zika, workflow: ingest.yaml } runs-on: ubuntu-latest steps: