From 9444496adec0c6d933b16e64208360a8fcf4f539 Mon Sep 17 00:00:00 2001 From: JavierCladellas <82624449+JavierCladellas@users.noreply.github.com> Date: Wed, 14 Jan 2026 17:20:48 +0100 Subject: [PATCH] Add benchmark on gaya_cladellash for feelpp_app_io - ThermalBridgesENISO10211 --- docs/modules/ROOT/pages/index.adoc | 2 +- .../2026_01_14T16_47_36/logs/0a2fb292.adoc | 182 + .../2026_01_14T16_47_36/logs/351bd412.adoc | 238 + .../2026_01_14T16_47_36/logs/377b7e84.adoc | 206 + .../2026_01_14T16_47_36/logs/39bc05b2.adoc | 302 + .../2026_01_14T16_47_36/logs/3d7c81c1.adoc | 178 + .../2026_01_14T16_47_36/logs/4134b149.adoc | 302 + .../2026_01_14T16_47_36/logs/4735c4f3.adoc | 430 ++ .../2026_01_14T16_47_36/logs/4e618e2d.adoc | 171 + .../2026_01_14T16_47_36/logs/54d703af.adoc | 171 + .../2026_01_14T16_47_36/logs/5bc476ec.adoc | 302 + .../2026_01_14T16_47_36/logs/5e2f3b66.adoc | 133 + .../2026_01_14T16_47_36/logs/5f2375ce.adoc | 302 + .../2026_01_14T16_47_36/logs/62077b0c.adoc | 190 + 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4.0.0 diff --git a/tmp/results/feelpp_app_io/ThermalBridgesENISO10211/gaya/2026_01_14T16_47_36/logs/0a2fb292.adoc b/tmp/results/feelpp_app_io/ThermalBridgesENISO10211/gaya/2026_01_14T16_47_36/logs/0a2fb292.adoc new file mode 100644 index 0000000..57ade27 --- /dev/null +++ b/tmp/results/feelpp_app_io/ThermalBridgesENISO10211/gaya/2026_01_14T16_47_36/logs/0a2fb292.adoc @@ -0,0 +1,182 @@ += ReFrame logs + +== ReFrame scheduler script + +[source,bash] +---- +#!/bin/bash +#SBATCH --job-name="rfm_RegressionTest_0a2fb292" +#SBATCH --ntasks=4 +#SBATCH --ntasks-per-node=4 +#SBATCH --cpus-per-task=1 +#SBATCH --output=rfm_job.out +#SBATCH --error=rfm_job.err +#SBATCH --exclusive +#SBATCH --partition=public +#SBATCH --threads-per-core=1 +#SBATCH --time=0-00:15:00 +source /etc/profile.d/modules.sh +export PATH=/opt/apptainer/latest/bin/:$PATH +srun --cpus-per-task=1 apptainer exec -B"/data/home/cladellash/actions-runner/_work/apps-feelpp/apps-feelpp/reframe/stage/gaya/public/default/RegressionTest_0a2fb292:/rfm_workdir" --home /data/scratch/cladellash/feelppdb --bind /data/scratch/cladellash/feelppdb/input_data/:/input_data --env OMP_NUM_THREADS=1 --sharens --bind /opt/:/opt/ --bind /data/:/data/ /data/scratch/cladellash/images//apps-feelpp.sif feelpp_app_io --directory /data/scratch/cladellash/feelppdb/app-feelpp-io/io/0a2fb292/ThermalBridgesENISO10211 --discretization P2 --repository.append.np 0 --gmsh.filename /input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M1/case3_p4.json --nrun 1 + +---- + +== ReFrame error log + +[source,bash] +---- +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + + +---- + +== ReFrame output log + +[source,bash] +---- +[ Starting Feel++ ] application O version 0.111.0-preview.120 date 2026-Jan-14 +[feelpp] create Feel++ root repository: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/0a2fb292/ThermalBridgesENISO10211 + +[feelpp] create Feel++ geo repository: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/0a2fb292/ThermalBridgesENISO10211/geo + +[feelpp] create Feel++ expressions directory: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/0a2fb292/ThermalBridgesENISO10211/exprs + +[feelpp] create Feel++ logs directory: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/0a2fb292/ThermalBridgesENISO10211/logs + + . O files are stored in /data/scratch/cladellash/feelppdb/app-feelpp-io/io/0a2fb292/ThermalBridgesENISO10211/ + .. logfiles :/data/scratch/cladellash/feelppdb/app-feelpp-io/io/0a2fb292/ThermalBridgesENISO10211/logs +[loadMesh] Loading mesh in format json+h5: "/input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M1/case3_p4.json" +[loadMesh] Time : 3.71986s + [create function space] Time : 7.09218s + [create vectorial function space] Time : 16.1012s + [save field] Time : 0.0501024s + [save vector field] Time : 0.117278s + [save mesh] Time : 0.291825s + [export time] Time : 8.74042s +Time load mesh 3.71986 +Time load create function space 7.09218 +Time load create vectorial function space 16.1012 +Time save mesh 0.291825 +Time save field 0.0501024 +Time save vector field 0.117278 +Time to export 8.74042 ++----------------------------------------------------------------------------------------------------------------------------------------------------+ +| O | ++----------------------------------------------------------------------------------------------------------------------------------------------------+ +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | +| | logs | /data/scratch/cladellash/feelppdb/app-feelpp-io/io/0a2fb292/ThermalBridgesENISO10211/logs | | +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | +| | journal | /data/scratch/cladellash/feelppdb/app-feelpp-io/io/0a2fb292/ThermalBridgesENISO10211/journal.json | | +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | +| | directories | +------------------------------------------------------------------------------------------------------------------------------+ | | +| | | | /data/scratch/cladellash/feelppdb/app-feelpp-io/io/0a2fb292/ThermalBridgesENISO10211/ | | | +| | | +------------------------------------------------------------------------------------------------------------------------------+ | | +| | | | /data/home/cladellash/actions-runner/_work/apps-feelpp/apps-feelpp/reframe/stage/gaya/public/default/RegressionTest_0a2fb292 | | | +| | | +------------------------------------------------------------------------------------------------------------------------------+ | | +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | ++----------------------------------------------------------------------------------------------------------------------------------------------------+ + +[ Stopping Feel++ ] application O execution time 43.1957s + +---- + +== feelpp_app_io.INFO + +[source,bash] +---- +Log file created at: 2026/01/14 16:59:18 +Running on machine: gaya3 +Log line format: [IWEF]mmdd hh:mm:ss.uuuuuu threadid file:line] msg +I0114 16:59:18.900815 754813 environment.cpp:1708] File /input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M1/case3_p4.json found +I0114 16:59:18.902261 754813 loadmesh.hpp:246] Loading mesh in json+h5 format "/input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M1/case3_p4.json" +I0114 16:59:18.934074 754813 partitionio.hpp:1134] read stat points 208257,51053,0 +I0114 16:59:18.934082 754813 partitionio.hpp:1137] read stat elements 1111009,276136,0 +I0114 16:59:18.934083 754813 partitionio.hpp:1140] read stat ghost_elements 52517,11513,0 +I0114 16:59:18.934085 754813 partitionio.hpp:1143] read stat marked_faces 94934,22372,0 +I0114 16:59:18.934087 754813 partitionio.hpp:1146] read stat marked_edges 0,0,0 +I0114 16:59:18.934087 754813 partitionio.hpp:1149] read stat marked_points 0,0,0 +I0114 16:59:18.934402 754813 partitionio.hpp:1168] loaded points_ids:1x208257 +I0114 16:59:18.934702 754813 partitionio.hpp:1170] loaded points_coords:1x624771 +I0114 16:59:18.956038 754813 partitionio.hpp:1267] loaded elements:1x5555045 +I0114 16:59:19.121660 754813 partitionio.hpp:1373] loaded ghost_elements:1x52517 +I0114 16:59:19.123216 754813 partitionio.hpp:1569] loaded marked_subentities:1x379736 +I0114 16:59:19.200168 754813 meshimpl.hpp:1051] We have 22372 faces in the database +I0114 16:59:19.971900 754813 meshimpl.hpp:1325] We have now 565557 faces in the mesh +I0114 16:59:21.870131 754813 meshimpl.hpp:1863] update boundary points... +I0114 16:59:21.903149 754813 meshimpl.hpp:1883] update boundary elements... +I0114 16:59:22.597546 754813 meshimpl.hpp:524] h average : 0.0325846 +I0114 16:59:22.597592 754813 meshimpl.hpp:525] h min : 0.0175455 +I0114 16:59:22.597594 754813 meshimpl.hpp:526] h max : 0.044348 +I0114 16:59:22.609690 754813 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 16:59:22.661825 754813 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 16:59:22.661837 754813 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 16:59:22.664122 754813 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 264623 on processor 0 +I0114 16:59:25.720721 754813 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 374780 +I0114 16:59:25.720885 754813 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 16:59:26.655210 754813 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 16:59:29.705401 754813 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 16:59:29.733218 754813 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 16:59:29.733234 754813 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 16:59:29.737145 754813 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 264623 on processor 0 +I0114 16:59:35.379374 754813 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 1124340 +I0114 16:59:35.379498 754813 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 16:59:37.539252 754813 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 16:59:45.806870 754813 element_impl.hpp:199] creating element u : u +I0114 16:59:46.506985 754813 element_impl.hpp:199] creating element {x+y+z,x+y+z,x+y+z}:x:y:z : u +I0114 16:59:46.507233 754813 exporterimpl.hpp:219] [Exporter] format : ensightgold +I0114 16:59:46.507236 754813 exporterimpl.hpp:220] [Exporter] N : 1 +I0114 16:59:46.758046 754813 partitionio.hpp:319] writing mesh in HDF5 format in /data/scratch/cladellash/feelppdb/app-feelpp-io/io/0a2fb292/ThermalBridgesENISO10211/mesh_0.h5 +I0114 16:59:46.973050 754813 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 16:59:47.013875 754813 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 16:59:47.013888 754813 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 16:59:47.017040 754813 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 264623 on processor 0 +I0114 16:59:47.862895 754813 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 48795 +I0114 16:59:47.862942 754813 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 16:59:48.256253 754813 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 16:59:49.169430 754813 element_impl.hpp:199] creating element u : u +I0114 16:59:49.721601 754813 element_impl.hpp:199] creating element uV : u +I0114 16:59:49.721639 754813 element_impl.hpp:199] creating element uV : u +I0114 16:59:49.721675 754813 element_impl.hpp:199] creating element uV : u +I0114 16:59:49.727838 754813 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 16:59:49.748617 754813 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 16:59:49.748629 754813 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 16:59:49.752609 754813 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 264623 on processor 0 +I0114 16:59:52.612823 754813 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 374780 +I0114 16:59:52.612895 754813 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 16:59:53.445003 754813 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 16:59:58.042418 754813 exporterensightgold_impl.hpp:1250] writing part 1 +I0114 16:59:58.052913 754813 exporterensightgold_impl.hpp:1250] writing part 2 +I0114 16:59:58.091830 754813 exporterensightgold_impl.hpp:1250] writing part 3 +I0114 16:59:58.096963 754813 exporterensightgold_impl.hpp:1250] writing part 4 +I0114 16:59:58.122316 754813 exporterensightgold_impl.hpp:1250] writing part 5 +I0114 16:59:58.157226 754813 exporterensightgold_impl.hpp:1250] writing part 6 +I0114 16:59:58.177495 754813 exporterensightgold_impl.hpp:1376] ExporterEnsightGold::writeVariableFiles Nodal: 2 +I0114 16:59:58.177500 754813 exporterensightgold_impl.hpp:1377] ExporterEnsightGold::writeVariableFiles Element: 0 +I0114 17:00:01.820689 754813 environment.cpp:2423] Environment::clearSomeMemory before: PETSC get current memory usage (resident memory): 2.63612e+06 KBytes 2636.12 MBytes 2.63612 GBytes +I0114 17:00:01.820709 754813 environment.cpp:2428] Environment::clearSomeMemory before: PETSC get current PETSC Malloc usage: 0 KBytes 0 MBytes 0 GBytes +I0114 17:00:01.820717 754813 environment.cpp:2430] Environment::clearSomeMemory before: PETSC get maximum PETSC Malloc usage(largest memory ever used so far): 0 KBytes 0 MBytes 0 GBytes +I0114 17:00:01.820881 754813 environment.cpp:2423] Environment::clearSomeMemory after: PETSC get current memory usage (resident memory): 2.63612e+06 KBytes 2636.12 MBytes 2.63612 GBytes +I0114 17:00:01.820886 754813 environment.cpp:2428] Environment::clearSomeMemory after: PETSC get current PETSC Malloc usage: 0 KBytes 0 MBytes 0 GBytes +I0114 17:00:01.820889 754813 environment.cpp:2430] Environment::clearSomeMemory after: PETSC get maximum PETSC Malloc usage(largest memory ever used so far): 0 KBytes 0 MBytes 0 GBytes + +---- +== feelpp_app_io.WARNING + +[source,bash] +---- +Log file created at: 2026/01/14 16:59:26 +Running on machine: gaya3 +Log line format: [IWEF]mmdd hh:mm:ss.uuuuuu threadid file:line] msg +W0114 16:59:26.655210 754813 doftable.hpp:2587] TODO: finish implementation of this case below +W0114 16:59:37.539252 754813 doftable.hpp:2587] TODO: finish implementation of this case below +W0114 16:59:48.256253 754813 doftable.hpp:2587] TODO: finish implementation of this case below +W0114 16:59:53.445003 754813 doftable.hpp:2587] TODO: finish implementation of this case below + +---- + diff --git a/tmp/results/feelpp_app_io/ThermalBridgesENISO10211/gaya/2026_01_14T16_47_36/logs/351bd412.adoc b/tmp/results/feelpp_app_io/ThermalBridgesENISO10211/gaya/2026_01_14T16_47_36/logs/351bd412.adoc new file mode 100644 index 0000000..3879894 --- /dev/null +++ b/tmp/results/feelpp_app_io/ThermalBridgesENISO10211/gaya/2026_01_14T16_47_36/logs/351bd412.adoc @@ -0,0 +1,238 @@ += ReFrame logs + +== ReFrame scheduler script + +[source,bash] +---- +#!/bin/bash +#SBATCH --job-name="rfm_RegressionTest_351bd412" +#SBATCH --ntasks=32 +#SBATCH --ntasks-per-node=32 +#SBATCH --cpus-per-task=1 +#SBATCH --output=rfm_job.out +#SBATCH --error=rfm_job.err +#SBATCH --exclusive +#SBATCH --partition=public +#SBATCH --threads-per-core=1 +#SBATCH --time=0-00:15:00 +source /etc/profile.d/modules.sh +export PATH=/opt/apptainer/latest/bin/:$PATH +srun --cpus-per-task=1 apptainer exec -B"/data/home/cladellash/actions-runner/_work/apps-feelpp/apps-feelpp/reframe/stage/gaya/public/default/RegressionTest_351bd412:/rfm_workdir" --home /data/scratch/cladellash/feelppdb --bind /data/scratch/cladellash/feelppdb/input_data/:/input_data --env OMP_NUM_THREADS=1 --sharens --bind /opt/:/opt/ --bind /data/:/data/ /data/scratch/cladellash/images//apps-feelpp.sif feelpp_app_io --directory /data/scratch/cladellash/feelppdb/app-feelpp-io/io/351bd412/ThermalBridgesENISO10211 --discretization P1 --repository.append.np 0 --gmsh.filename /input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M1/case3_p32.json --nrun 1 + +---- + +== ReFrame error log + +[source,bash] +---- +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + + +---- + +== ReFrame output log + +[source,bash] +---- +[ Starting Feel++ ] application O version 0.111.0-preview.120 date 2026-Jan-14 +[feelpp] create Feel++ root repository: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/351bd412/ThermalBridgesENISO10211 + +[feelpp] create Feel++ geo repository: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/351bd412/ThermalBridgesENISO10211/geo + +[feelpp] create Feel++ expressions directory: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/351bd412/ThermalBridgesENISO10211/exprs + +[feelpp] create Feel++ logs directory: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/351bd412/ThermalBridgesENISO10211/logs + + . O files are stored in /data/scratch/cladellash/feelppdb/app-feelpp-io/io/351bd412/ThermalBridgesENISO10211/ + .. logfiles :/data/scratch/cladellash/feelppdb/app-feelpp-io/io/351bd412/ThermalBridgesENISO10211/logs +[loadMesh] Loading mesh in format json+h5: "/input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M1/case3_p32.json" +[loadMesh] Time : 1.08909s + [create function space] Time : 0.411803s + [create vectorial function space] Time : 0.922783s + [save field] Time : 0.0693011s + [save vector field] Time : 0.0794765s + [save mesh] Time : 0.375989s + [export time] Time : 1.43541s +Time load mesh 1.08909 +Time load create function space 0.411803 +Time load create vectorial function space 0.922783 +Time save mesh 0.375989 +Time save field 0.0693011 +Time save vector field 0.0794765 +Time to export 1.43541 ++----------------------------------------------------------------------------------------------------------------------------------------------------+ +| O | ++----------------------------------------------------------------------------------------------------------------------------------------------------+ +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | +| | logs | /data/scratch/cladellash/feelppdb/app-feelpp-io/io/351bd412/ThermalBridgesENISO10211/logs | | +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | +| | journal | /data/scratch/cladellash/feelppdb/app-feelpp-io/io/351bd412/ThermalBridgesENISO10211/journal.json | | +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | +| | directories | +------------------------------------------------------------------------------------------------------------------------------+ | | +| | | | /data/scratch/cladellash/feelppdb/app-feelpp-io/io/351bd412/ThermalBridgesENISO10211/ | | | +| | | +------------------------------------------------------------------------------------------------------------------------------+ | | +| | | | /data/home/cladellash/actions-runner/_work/apps-feelpp/apps-feelpp/reframe/stage/gaya/public/default/RegressionTest_351bd412 | | | +| | | +------------------------------------------------------------------------------------------------------------------------------+ | | +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | ++----------------------------------------------------------------------------------------------------------------------------------------------------+ + +[ Stopping Feel++ ] application O execution time 5.53237s + +---- + +== feelpp_app_io.INFO + +[source,bash] +---- +Log file created at: 2026/01/14 16:52:21 +Running on machine: gaya5 +Log line format: [IWEF]mmdd hh:mm:ss.uuuuuu threadid file:line] msg +I0114 16:52:21.114928 711885 environment.cpp:1708] File /input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M1/case3_p32.json found +I0114 16:52:21.116453 711885 loadmesh.hpp:246] Loading mesh in json+h5 format "/input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M1/case3_p32.json" +I0114 16:52:21.220551 711885 partitionio.hpp:1134] read stat points 252711,8191,0 +I0114 16:52:21.220567 711885 partitionio.hpp:1137] read stat elements 1267743,41598,0 +I0114 16:52:21.220569 711885 partitionio.hpp:1140] read stat ghost_elements 209251,8657,0 +I0114 16:52:21.220572 711885 partitionio.hpp:1143] read stat marked_faces 107831,2484,0 +I0114 16:52:21.220574 711885 partitionio.hpp:1146] read stat marked_edges 0,0,0 +I0114 16:52:21.220575 711885 partitionio.hpp:1149] read stat marked_points 0,0,0 +I0114 16:52:21.221930 711885 partitionio.hpp:1168] loaded points_ids:1x252711 +I0114 16:52:21.223170 711885 partitionio.hpp:1170] loaded points_coords:1x758133 +I0114 16:52:21.350243 711885 partitionio.hpp:1267] loaded elements:1x6338715 +I0114 16:52:21.407176 711885 partitionio.hpp:1373] loaded ghost_elements:1x209251 +I0114 16:52:21.444311 711885 partitionio.hpp:1569] loaded marked_subentities:1x431324 +I0114 16:52:21.498032 711885 meshimpl.hpp:1051] We have 2484 faces in the database +I0114 16:52:21.601053 711885 meshimpl.hpp:1325] We have now 86048 faces in the mesh +I0114 16:52:22.031600 711885 meshimpl.hpp:1863] update boundary points... +I0114 16:52:22.037653 711885 meshimpl.hpp:1883] update boundary elements... +I0114 16:52:22.163980 711885 meshimpl.hpp:524] h average : 0.0325846 +I0114 16:52:22.164038 711885 meshimpl.hpp:525] h min : 0.0175455 +I0114 16:52:22.164041 711885 meshimpl.hpp:526] h max : 0.044348 +I0114 16:52:22.172406 711885 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 16:52:22.180887 711885 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 16:52:22.180909 711885 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 16:52:22.181375 711885 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 32941 on processor 0 +I0114 16:52:22.272585 711885 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 6467 +I0114 16:52:22.272619 711885 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 16:52:22.443151 711885 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 16:52:22.584942 711885 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 16:52:22.586975 711885 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 16:52:22.586987 711885 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 16:52:22.587293 711885 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 32941 on processor 0 +I0114 16:52:22.761745 711885 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 19401 +I0114 16:52:22.761787 711885 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 16:52:23.046046 711885 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 16:52:23.507807 711885 element_impl.hpp:199] creating element u : u +I0114 16:52:23.576217 711885 element_impl.hpp:199] creating element {x+y+z,x+y+z,x+y+z}:x:y:z : u +I0114 16:52:23.576264 711885 exporterimpl.hpp:219] [Exporter] format : ensightgold +I0114 16:52:23.576267 711885 exporterimpl.hpp:220] [Exporter] N : 1 +I0114 16:52:23.738184 711885 partitionio.hpp:319] writing mesh in HDF5 format in /data/scratch/cladellash/feelppdb/app-feelpp-io/io/351bd412/ThermalBridgesENISO10211/mesh_0.h5 +I0114 16:52:24.106607 711885 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 16:52:24.111567 711885 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 16:52:24.111575 711885 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 16:52:24.112221 711885 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 32941 on processor 0 +I0114 16:52:24.182108 711885 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 6467 +I0114 16:52:24.182134 711885 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 16:52:24.299556 711885 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 16:52:24.408540 711885 element_impl.hpp:199] creating element u : u +I0114 16:52:24.474964 711885 element_impl.hpp:199] creating element uV : u +I0114 16:52:24.474988 711885 element_impl.hpp:199] creating element uV : u +I0114 16:52:24.474995 711885 element_impl.hpp:199] creating element uV : u +I0114 16:52:24.476188 711885 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 16:52:24.479041 711885 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 16:52:24.479048 711885 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 16:52:24.479561 711885 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 32941 on processor 0 +I0114 16:52:24.548615 711885 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 6467 +I0114 16:52:24.548638 711885 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 16:52:24.666440 711885 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 16:52:25.259138 711885 exporterensightgold_impl.hpp:1250] writing part 1 +I0114 16:52:25.407456 711885 exporterensightgold_impl.hpp:1250] writing part 2 +I0114 16:52:25.431000 711885 exporterensightgold_impl.hpp:1250] writing part 3 +I0114 16:52:25.441601 711885 exporterensightgold_impl.hpp:1250] writing part 4 +I0114 16:52:25.445077 711885 exporterensightgold_impl.hpp:1250] writing part 5 +I0114 16:52:25.451546 711885 exporterensightgold_impl.hpp:1250] writing part 6 +I0114 16:52:25.457351 711885 exporterensightgold_impl.hpp:1376] ExporterEnsightGold::writeVariableFiles Nodal: 2 +I0114 16:52:25.457357 711885 exporterensightgold_impl.hpp:1377] ExporterEnsightGold::writeVariableFiles Element: 0 +I0114 16:52:26.243999 711885 environment.cpp:2423] Environment::clearSomeMemory before: PETSC get current memory usage (resident memory): 654311 KBytes 654.311 MBytes 0.654311 GBytes +I0114 16:52:26.244020 711885 environment.cpp:2428] Environment::clearSomeMemory before: PETSC get current PETSC Malloc usage: 0 KBytes 0 MBytes 0 GBytes +I0114 16:52:26.244025 711885 environment.cpp:2430] Environment::clearSomeMemory before: PETSC get maximum PETSC Malloc usage(largest memory ever used so far): 0 KBytes 0 MBytes 0 GBytes +I0114 16:52:26.244233 711885 environment.cpp:2423] Environment::clearSomeMemory after: PETSC get current memory usage (resident memory): 654311 KBytes 654.311 MBytes 0.654311 GBytes +I0114 16:52:26.244239 711885 environment.cpp:2428] Environment::clearSomeMemory after: PETSC get current PETSC Malloc usage: 0 KBytes 0 MBytes 0 GBytes +I0114 16:52:26.244241 711885 environment.cpp:2430] Environment::clearSomeMemory after: PETSC get maximum PETSC Malloc usage(largest memory ever used so far): 0 KBytes 0 MBytes 0 GBytes + +---- +== feelpp_app_io.WARNING + +[source,bash] +---- +Log file created at: 2026/01/14 16:52:22 +Running on machine: gaya5 +Log line format: [IWEF]mmdd hh:mm:ss.uuuuuu threadid file:line] msg +W0114 16:52:22.443151 711885 doftable.hpp:2587] TODO: finish implementation of this case below +W0114 16:52:23.046046 711885 doftable.hpp:2587] TODO: finish implementation of this case below +W0114 16:52:24.299556 711885 doftable.hpp:2587] TODO: finish implementation of this case below +W0114 16:52:24.666440 711885 doftable.hpp:2587] TODO: finish implementation of this case below + +---- + diff --git a/tmp/results/feelpp_app_io/ThermalBridgesENISO10211/gaya/2026_01_14T16_47_36/logs/377b7e84.adoc b/tmp/results/feelpp_app_io/ThermalBridgesENISO10211/gaya/2026_01_14T16_47_36/logs/377b7e84.adoc new file mode 100644 index 0000000..86bdb5c --- /dev/null +++ b/tmp/results/feelpp_app_io/ThermalBridgesENISO10211/gaya/2026_01_14T16_47_36/logs/377b7e84.adoc @@ -0,0 +1,206 @@ += ReFrame logs + +== ReFrame scheduler script + +[source,bash] +---- +#!/bin/bash +#SBATCH --job-name="rfm_RegressionTest_377b7e84" +#SBATCH --ntasks=16 +#SBATCH --ntasks-per-node=16 +#SBATCH --cpus-per-task=1 +#SBATCH --output=rfm_job.out +#SBATCH --error=rfm_job.err +#SBATCH --exclusive +#SBATCH --partition=public +#SBATCH --threads-per-core=1 +#SBATCH --time=0-00:15:00 +source /etc/profile.d/modules.sh +export PATH=/opt/apptainer/latest/bin/:$PATH +srun --cpus-per-task=1 apptainer exec -B"/data/home/cladellash/actions-runner/_work/apps-feelpp/apps-feelpp/reframe/stage/gaya/public/default/RegressionTest_377b7e84:/rfm_workdir" --home /data/scratch/cladellash/feelppdb --bind /data/scratch/cladellash/feelppdb/input_data/:/input_data --env OMP_NUM_THREADS=1 --sharens --bind /opt/:/opt/ --bind /data/:/data/ /data/scratch/cladellash/images//apps-feelpp.sif feelpp_app_io --directory /data/scratch/cladellash/feelppdb/app-feelpp-io/io/377b7e84/ThermalBridgesENISO10211 --discretization P1 --repository.append.np 0 --gmsh.filename /input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M2/case3_p16.json --nrun 1 + +---- + +== ReFrame error log + +[source,bash] +---- +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + + +---- + +== ReFrame output log + +[source,bash] +---- +[ Starting Feel++ ] application O version 0.111.0-preview.120 date 2026-Jan-14 +[feelpp] create Feel++ root repository: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/377b7e84/ThermalBridgesENISO10211 + +[feelpp] create Feel++ geo repository: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/377b7e84/ThermalBridgesENISO10211/geo + +[feelpp] create Feel++ expressions directory: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/377b7e84/ThermalBridgesENISO10211/exprs + +[feelpp] create Feel++ logs directory: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/377b7e84/ThermalBridgesENISO10211/logs + + . O files are stored in /data/scratch/cladellash/feelppdb/app-feelpp-io/io/377b7e84/ThermalBridgesENISO10211/ + .. logfiles :/data/scratch/cladellash/feelppdb/app-feelpp-io/io/377b7e84/ThermalBridgesENISO10211/logs +[loadMesh] Loading mesh in format json+h5: "/input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M2/case3_p16.json" +[loadMesh] Time : 11.8987s + [create function space] Time : 10.7071s + [create vectorial function space] Time : 19.0042s + [save field] Time : 0.0783994s + [save vector field] Time : 0.154209s + [save mesh] Time : 1.43189s + [export time] Time : 14.3472s +Time load mesh 11.8987 +Time load create function space 10.7071 +Time load create vectorial function space 19.0042 +Time save mesh 1.43189 +Time save field 0.0783994 +Time save vector field 0.154209 +Time to export 14.3472 ++----------------------------------------------------------------------------------------------------------------------------------------------------+ +| O | ++----------------------------------------------------------------------------------------------------------------------------------------------------+ +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | +| | logs | /data/scratch/cladellash/feelppdb/app-feelpp-io/io/377b7e84/ThermalBridgesENISO10211/logs | | +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | +| | journal | /data/scratch/cladellash/feelppdb/app-feelpp-io/io/377b7e84/ThermalBridgesENISO10211/journal.json | | +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | +| | directories | +------------------------------------------------------------------------------------------------------------------------------+ | | +| | | | /data/scratch/cladellash/feelppdb/app-feelpp-io/io/377b7e84/ThermalBridgesENISO10211/ | | | +| | | +------------------------------------------------------------------------------------------------------------------------------+ | | +| | | | /data/home/cladellash/actions-runner/_work/apps-feelpp/apps-feelpp/reframe/stage/gaya/public/default/RegressionTest_377b7e84 | | | +| | | +------------------------------------------------------------------------------------------------------------------------------+ | | +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | ++----------------------------------------------------------------------------------------------------------------------------------------------------+ + +[ Stopping Feel++ ] application O execution time 73.0874s + +---- + +== feelpp_app_io.INFO + +[source,bash] +---- +Log file created at: 2026/01/14 16:49:16 +Running on machine: gaya1 +Log line format: [IWEF]mmdd hh:mm:ss.uuuuuu threadid file:line] msg +I0114 16:49:16.998594 938401 environment.cpp:1708] File /input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M2/case3_p16.json found +I0114 16:49:17.000982 938401 loadmesh.hpp:246] Loading mesh in json+h5 format "/input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M2/case3_p16.json" +I0114 16:49:17.081497 938401 partitionio.hpp:1134] read stat points 1545801,94312,0 +I0114 16:49:17.081516 938401 partitionio.hpp:1137] read stat elements 8733669,534457,0 +I0114 16:49:17.081517 938401 partitionio.hpp:1140] read stat ghost_elements 544476,23125,0 +I0114 16:49:17.081519 938401 partitionio.hpp:1143] read stat marked_faces 374422,26583,0 +I0114 16:49:17.081521 938401 partitionio.hpp:1146] read stat marked_edges 0,0,0 +I0114 16:49:17.081522 938401 partitionio.hpp:1149] read stat marked_points 0,0,0 +I0114 16:49:17.082345 938401 partitionio.hpp:1168] loaded points_ids:1x1545801 +I0114 16:49:17.082911 938401 partitionio.hpp:1170] loaded points_coords:1x4637403 +I0114 16:49:17.297180 938401 partitionio.hpp:1267] loaded elements:1x43668345 +I0114 16:49:18.478349 938401 partitionio.hpp:1373] loaded ghost_elements:1x544476 +I0114 16:49:18.529791 938401 partitionio.hpp:1569] loaded marked_subentities:1x1497688 +I0114 16:49:18.904160 938401 meshimpl.hpp:1051] We have 26583 faces in the database +I0114 16:49:20.831642 938401 meshimpl.hpp:1325] We have now 1086293 faces in the mesh +I0114 16:49:26.661142 938401 meshimpl.hpp:1863] update boundary points... +I0114 16:49:26.729696 938401 meshimpl.hpp:1883] update boundary elements... +I0114 16:49:28.869762 938401 meshimpl.hpp:524] h average : 0.01632 +I0114 16:49:28.869797 938401 meshimpl.hpp:525] h min : 0.0098099 +I0114 16:49:28.869800 938401 meshimpl.hpp:526] h max : 0.0226452 +I0114 16:49:28.885501 938401 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 16:49:29.107962 938401 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 16:49:29.107976 938401 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 16:49:29.112993 938401 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 511332 on processor 0 +I0114 16:49:32.622359 938401 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 90040 +I0114 16:49:32.622430 938401 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 16:49:34.608098 938401 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 16:49:39.598312 938401 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 16:49:39.642297 938401 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 16:49:39.642313 938401 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 16:49:39.648484 938401 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 511332 on processor 0 +I0114 16:49:45.603229 938401 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 270120 +I0114 16:49:45.603364 938401 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 16:49:47.943543 938401 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 16:49:58.602661 938401 element_impl.hpp:199] creating element u : u +I0114 16:49:59.472210 938401 element_impl.hpp:199] creating element {x+y+z,x+y+z,x+y+z}:x:y:z : u +I0114 16:49:59.472347 938401 exporterimpl.hpp:219] [Exporter] format : ensightgold +I0114 16:49:59.472350 938401 exporterimpl.hpp:220] [Exporter] N : 1 +I0114 16:49:59.821557 938401 partitionio.hpp:319] writing mesh in HDF5 format in /data/scratch/cladellash/feelppdb/app-feelpp-io/io/377b7e84/ThermalBridgesENISO10211/mesh_0.h5 +I0114 16:50:01.154682 938401 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 16:50:01.214154 938401 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 16:50:01.214172 938401 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 16:50:01.222276 938401 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 511332 on processor 0 +I0114 16:50:04.338200 938401 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 90040 +I0114 16:50:04.338249 938401 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 16:50:05.644732 938401 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 16:50:09.848265 938401 element_impl.hpp:199] creating element u : u +I0114 16:50:10.989508 938401 element_impl.hpp:199] creating element uV : u +I0114 16:50:10.989807 938401 element_impl.hpp:199] creating element uV : u +I0114 16:50:10.990283 938401 element_impl.hpp:199] creating element uV : u +I0114 16:50:11.013496 938401 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 16:50:11.055456 938401 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 16:50:11.055465 938401 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 16:50:11.064586 938401 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 511332 on processor 0 +I0114 16:50:14.236198 938401 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 90040 +I0114 16:50:14.236248 938401 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 16:50:15.662900 938401 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 16:50:23.758597 938401 exporterensightgold_impl.hpp:1250] writing part 1 +I0114 16:50:23.850673 938401 exporterensightgold_impl.hpp:1250] writing part 2 +I0114 16:50:23.945859 938401 exporterensightgold_impl.hpp:1250] writing part 3 +I0114 16:50:23.949234 938401 exporterensightgold_impl.hpp:1250] writing part 4 +I0114 16:50:24.160051 938401 exporterensightgold_impl.hpp:1250] writing part 5 +I0114 16:50:24.233970 938401 exporterensightgold_impl.hpp:1250] writing part 6 +I0114 16:50:24.328912 938401 exporterensightgold_impl.hpp:1376] ExporterEnsightGold::writeVariableFiles Nodal: 2 +I0114 16:50:24.328919 938401 exporterensightgold_impl.hpp:1377] ExporterEnsightGold::writeVariableFiles Element: 0 +I0114 16:50:29.771910 938401 environment.cpp:2423] Environment::clearSomeMemory before: PETSC get current memory usage (resident memory): 3.22123e+06 KBytes 3221.23 MBytes 3.22123 GBytes +I0114 16:50:29.771932 938401 environment.cpp:2428] Environment::clearSomeMemory before: PETSC get current PETSC Malloc usage: 0 KBytes 0 MBytes 0 GBytes +I0114 16:50:29.771938 938401 environment.cpp:2430] Environment::clearSomeMemory before: PETSC get maximum PETSC Malloc usage(largest memory ever used so far): 0 KBytes 0 MBytes 0 GBytes +I0114 16:50:29.771966 938401 environment.cpp:2423] Environment::clearSomeMemory after: PETSC get current memory usage (resident memory): 3.22123e+06 KBytes 3221.23 MBytes 3.22123 GBytes +I0114 16:50:29.771970 938401 environment.cpp:2428] Environment::clearSomeMemory after: PETSC get current PETSC Malloc usage: 0 KBytes 0 MBytes 0 GBytes +I0114 16:50:29.771972 938401 environment.cpp:2430] Environment::clearSomeMemory after: PETSC get maximum PETSC Malloc usage(largest memory ever used so far): 0 KBytes 0 MBytes 0 GBytes + +---- +== feelpp_app_io.WARNING + +[source,bash] +---- +Log file created at: 2026/01/14 16:49:34 +Running on machine: gaya1 +Log line format: [IWEF]mmdd hh:mm:ss.uuuuuu threadid file:line] msg +W0114 16:49:34.608098 938401 doftable.hpp:2587] TODO: finish implementation of this case below +W0114 16:49:47.943543 938401 doftable.hpp:2587] TODO: finish implementation of this case below +W0114 16:50:05.644732 938401 doftable.hpp:2587] TODO: finish implementation of this case below +W0114 16:50:15.662900 938401 doftable.hpp:2587] TODO: finish implementation of this case below + +---- + diff --git a/tmp/results/feelpp_app_io/ThermalBridgesENISO10211/gaya/2026_01_14T16_47_36/logs/39bc05b2.adoc b/tmp/results/feelpp_app_io/ThermalBridgesENISO10211/gaya/2026_01_14T16_47_36/logs/39bc05b2.adoc new file mode 100644 index 0000000..f8d55e9 --- /dev/null +++ b/tmp/results/feelpp_app_io/ThermalBridgesENISO10211/gaya/2026_01_14T16_47_36/logs/39bc05b2.adoc @@ -0,0 +1,302 @@ += ReFrame logs + +== ReFrame scheduler script + +[source,bash] +---- +#!/bin/bash +#SBATCH --job-name="rfm_RegressionTest_39bc05b2" +#SBATCH --ntasks=64 +#SBATCH --ntasks-per-node=64 +#SBATCH --cpus-per-task=1 +#SBATCH --output=rfm_job.out +#SBATCH --error=rfm_job.err +#SBATCH --exclusive +#SBATCH --partition=public +#SBATCH --threads-per-core=1 +#SBATCH --time=0-00:15:00 +source /etc/profile.d/modules.sh +export PATH=/opt/apptainer/latest/bin/:$PATH +srun --cpus-per-task=1 apptainer exec -B"/data/home/cladellash/actions-runner/_work/apps-feelpp/apps-feelpp/reframe/stage/gaya/public/default/RegressionTest_39bc05b2:/rfm_workdir" --home /data/scratch/cladellash/feelppdb --bind /data/scratch/cladellash/feelppdb/input_data/:/input_data --env OMP_NUM_THREADS=1 --sharens --bind /opt/:/opt/ --bind /data/:/data/ /data/scratch/cladellash/images//apps-feelpp.sif feelpp_app_io --directory /data/scratch/cladellash/feelppdb/app-feelpp-io/io/39bc05b2/ThermalBridgesENISO10211 --discretization P2 --repository.append.np 0 --gmsh.filename /input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M2/case3_p64.json --nrun 1 + +---- + +== ReFrame error log + +[source,bash] +---- +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + + +---- + +== ReFrame output log + +[source,bash] +---- +[ Starting Feel++ ] application O version 0.111.0-preview.120 date 2026-Jan-14 +[feelpp] create Feel++ root repository: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/39bc05b2/ThermalBridgesENISO10211 + +[feelpp] create Feel++ geo repository: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/39bc05b2/ThermalBridgesENISO10211/geo + +[feelpp] create Feel++ expressions directory: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/39bc05b2/ThermalBridgesENISO10211/exprs + +[feelpp] create Feel++ logs directory: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/39bc05b2/ThermalBridgesENISO10211/logs + + . O files are stored in /data/scratch/cladellash/feelppdb/app-feelpp-io/io/39bc05b2/ThermalBridgesENISO10211/ + .. logfiles :/data/scratch/cladellash/feelppdb/app-feelpp-io/io/39bc05b2/ThermalBridgesENISO10211/logs +[loadMesh] Loading mesh in format json+h5: "/input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M2/case3_p64.json" +[loadMesh] Time : 4.0946s + [create function space] Time : 5.28995s + [create vectorial function space] Time : 11.2714s + [save field] Time : 0.469071s + [save vector field] Time : 0.989832s + [save mesh] Time : 1.73766s + [export time] Time : 8.86277s +Time load mesh 4.0946 +Time load create function space 5.28995 +Time load create vectorial function space 11.2714 +Time save mesh 1.73766 +Time save field 0.469071 +Time save vector field 0.989832 +Time to export 8.86277 ++----------------------------------------------------------------------------------------------------------------------------------------------------+ +| O | ++----------------------------------------------------------------------------------------------------------------------------------------------------+ +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | +| | logs | /data/scratch/cladellash/feelppdb/app-feelpp-io/io/39bc05b2/ThermalBridgesENISO10211/logs | | +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | +| | journal | /data/scratch/cladellash/feelppdb/app-feelpp-io/io/39bc05b2/ThermalBridgesENISO10211/journal.json | | +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | +| | directories | +------------------------------------------------------------------------------------------------------------------------------+ | | +| | | | /data/scratch/cladellash/feelppdb/app-feelpp-io/io/39bc05b2/ThermalBridgesENISO10211/ | | | +| | | +------------------------------------------------------------------------------------------------------------------------------+ | | +| | | | /data/home/cladellash/actions-runner/_work/apps-feelpp/apps-feelpp/reframe/stage/gaya/public/default/RegressionTest_39bc05b2 | | | +| | | +------------------------------------------------------------------------------------------------------------------------------+ | | +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | ++----------------------------------------------------------------------------------------------------------------------------------------------------+ + +[ Stopping Feel++ ] application O execution time 39.2998s + +---- + +== feelpp_app_io.INFO + +[source,bash] +---- +Log file created at: 2026/01/14 17:04:08 +Running on machine: gaya4 +Log line format: [IWEF]mmdd hh:mm:ss.uuuuuu threadid file:line] msg +I0114 17:04:08.903102 752606 environment.cpp:1708] File /input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M2/case3_p64.json found +I0114 17:04:08.907172 752606 loadmesh.hpp:246] Loading mesh in json+h5 format "/input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M2/case3_p64.json" +I0114 17:04:09.038957 752606 partitionio.hpp:1134] read stat points 1734688,27541,0 +I0114 17:04:09.038987 752606 partitionio.hpp:1137] read stat elements 9435174,151138,0 +I0114 17:04:09.038990 752606 partitionio.hpp:1140] read stat ghost_elements 1245981,22541,0 +I0114 17:04:09.038991 752606 partitionio.hpp:1143] read stat marked_faces 412280,4842,0 +I0114 17:04:09.038995 752606 partitionio.hpp:1146] read stat marked_edges 0,0,0 +I0114 17:04:09.038996 752606 partitionio.hpp:1149] read stat marked_points 0,0,0 +I0114 17:04:09.044061 752606 partitionio.hpp:1168] loaded points_ids:1x1734688 +I0114 17:04:09.044891 752606 partitionio.hpp:1170] loaded points_coords:1x5204064 +I0114 17:04:09.120728 752606 partitionio.hpp:1267] loaded elements:1x47175870 +I0114 17:04:09.797241 752606 partitionio.hpp:1373] loaded ghost_elements:1x1245981 +I0114 17:04:09.911857 752606 partitionio.hpp:1569] loaded marked_subentities:1x1649120 +I0114 17:04:10.044006 752606 meshimpl.hpp:1051] We have 4842 faces in the database +I0114 17:04:10.506006 752606 meshimpl.hpp:1325] We have now 308767 faces in the mesh +I0114 17:04:12.319906 752606 meshimpl.hpp:1863] update boundary points... +I0114 17:04:12.348483 752606 meshimpl.hpp:1883] update boundary elements... +I0114 17:04:12.949894 752606 meshimpl.hpp:524] h average : 0.01632 +I0114 17:04:12.949939 752606 meshimpl.hpp:525] h min : 0.0098099 +I0114 17:04:12.949941 752606 meshimpl.hpp:526] h max : 0.0226452 +I0114 17:04:12.964466 752606 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 17:04:13.005949 752606 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 17:04:13.005963 752606 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 17:04:13.007910 752606 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 128597 on processor 0 +I0114 17:04:14.770066 752606 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 180716 +I0114 17:04:14.770215 752606 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 17:04:15.996822 752606 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 17:04:18.256896 752606 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 17:04:18.275295 752606 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 17:04:18.275313 752606 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 17:04:18.277196 752606 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 128597 on processor 0 +I0114 17:04:21.227382 752606 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 542148 +I0114 17:04:21.227491 752606 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 17:04:23.912631 752606 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 17:04:29.528614 752606 element_impl.hpp:199] creating element u : u +I0114 17:04:30.228621 752606 element_impl.hpp:199] creating element {x+y+z,x+y+z,x+y+z}:x:y:z : u +I0114 17:04:30.228806 752606 exporterimpl.hpp:219] [Exporter] format : ensightgold +I0114 17:04:30.228808 752606 exporterimpl.hpp:220] [Exporter] N : 1 +I0114 17:04:31.739971 752606 partitionio.hpp:319] writing mesh in HDF5 format in /data/scratch/cladellash/feelppdb/app-feelpp-io/io/39bc05b2/ThermalBridgesENISO10211/mesh_0.h5 +I0114 17:04:33.442121 752606 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 17:04:33.475601 752606 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 17:04:33.475611 752606 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 17:04:33.476986 752606 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 128597 on processor 0 +I0114 17:04:33.990773 752606 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 23333 +I0114 17:04:33.990818 752606 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 17:04:34.583542 752606 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 17:04:35.333329 752606 element_impl.hpp:199] creating element u : u +I0114 17:04:35.875233 752606 element_impl.hpp:199] creating element uV : u +I0114 17:04:35.875272 752606 element_impl.hpp:199] creating element uV : u +I0114 17:04:35.875299 752606 element_impl.hpp:199] creating element uV : u +I0114 17:04:35.882279 752606 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 17:04:35.898505 752606 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 17:04:35.898517 752606 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 17:04:35.900962 752606 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 128597 on processor 0 +I0114 17:04:37.505036 752606 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 180716 +I0114 17:04:37.505087 752606 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 17:04:38.693128 752606 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 17:04:42.813176 752606 exporterensightgold_impl.hpp:1250] writing part 1 +I0114 17:04:43.178306 752606 exporterensightgold_impl.hpp:1250] writing part 2 +I0114 17:04:43.249648 752606 exporterensightgold_impl.hpp:1250] writing part 3 +I0114 17:04:43.381444 752606 exporterensightgold_impl.hpp:1250] writing part 4 +I0114 17:04:43.662011 752606 exporterensightgold_impl.hpp:1250] writing part 5 +I0114 17:04:43.690049 752606 exporterensightgold_impl.hpp:1250] writing part 6 +I0114 17:04:43.697583 752606 exporterensightgold_impl.hpp:1376] ExporterEnsightGold::writeVariableFiles Nodal: 2 +I0114 17:04:43.697588 752606 exporterensightgold_impl.hpp:1377] ExporterEnsightGold::writeVariableFiles Element: 0 +I0114 17:04:47.454041 752606 environment.cpp:2423] Environment::clearSomeMemory before: PETSC get current memory usage (resident memory): 1.53512e+06 KBytes 1535.12 MBytes 1.53512 GBytes +I0114 17:04:47.454073 752606 environment.cpp:2428] Environment::clearSomeMemory before: PETSC get current PETSC Malloc usage: 0 KBytes 0 MBytes 0 GBytes +I0114 17:04:47.454085 752606 environment.cpp:2430] Environment::clearSomeMemory before: PETSC get maximum PETSC Malloc usage(largest memory ever used so far): 0 KBytes 0 MBytes 0 GBytes +I0114 17:04:47.454124 752606 environment.cpp:2423] Environment::clearSomeMemory after: PETSC get current memory usage (resident memory): 1.53512e+06 KBytes 1535.12 MBytes 1.53512 GBytes +I0114 17:04:47.454129 752606 environment.cpp:2428] Environment::clearSomeMemory after: PETSC get current PETSC Malloc usage: 0 KBytes 0 MBytes 0 GBytes +I0114 17:04:47.454131 752606 environment.cpp:2430] Environment::clearSomeMemory after: PETSC get maximum PETSC Malloc usage(largest memory ever used so far): 0 KBytes 0 MBytes 0 GBytes + +---- +== feelpp_app_io.WARNING + +[source,bash] +---- +Log file created at: 2026/01/14 17:04:15 +Running on machine: gaya4 +Log line format: [IWEF]mmdd hh:mm:ss.uuuuuu threadid file:line] msg +W0114 17:04:15.996822 752606 doftable.hpp:2587] TODO: finish implementation of this case below +W0114 17:04:23.912631 752606 doftable.hpp:2587] TODO: finish implementation of this case below +W0114 17:04:34.583542 752606 doftable.hpp:2587] TODO: finish implementation of this case below +W0114 17:04:38.693128 752606 doftable.hpp:2587] TODO: finish implementation of this case below + +---- + diff --git a/tmp/results/feelpp_app_io/ThermalBridgesENISO10211/gaya/2026_01_14T16_47_36/logs/3d7c81c1.adoc b/tmp/results/feelpp_app_io/ThermalBridgesENISO10211/gaya/2026_01_14T16_47_36/logs/3d7c81c1.adoc new file mode 100644 index 0000000..5398f52 --- /dev/null +++ b/tmp/results/feelpp_app_io/ThermalBridgesENISO10211/gaya/2026_01_14T16_47_36/logs/3d7c81c1.adoc @@ -0,0 +1,178 @@ += ReFrame logs + +== ReFrame scheduler script + +[source,bash] +---- +#!/bin/bash +#SBATCH --job-name="rfm_RegressionTest_3d7c81c1" +#SBATCH --ntasks=2 +#SBATCH --ntasks-per-node=2 +#SBATCH --cpus-per-task=1 +#SBATCH --output=rfm_job.out +#SBATCH --error=rfm_job.err +#SBATCH --exclusive +#SBATCH --partition=public +#SBATCH --threads-per-core=1 +#SBATCH --time=0-00:15:00 +source /etc/profile.d/modules.sh +export PATH=/opt/apptainer/latest/bin/:$PATH +srun --cpus-per-task=1 apptainer exec -B"/data/home/cladellash/actions-runner/_work/apps-feelpp/apps-feelpp/reframe/stage/gaya/public/default/RegressionTest_3d7c81c1:/rfm_workdir" --home /data/scratch/cladellash/feelppdb --bind /data/scratch/cladellash/feelppdb/input_data/:/input_data --env OMP_NUM_THREADS=1 --sharens --bind /opt/:/opt/ --bind /data/:/data/ /data/scratch/cladellash/images//apps-feelpp.sif feelpp_app_io --directory /data/scratch/cladellash/feelppdb/app-feelpp-io/io/3d7c81c1/ThermalBridgesENISO10211 --discretization P1 --repository.append.np 0 --gmsh.filename /input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M2/case3_p2.json --nrun 1 + +---- + +== ReFrame error log + +[source,bash] +---- +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + + +---- + +== ReFrame output log + +[source,bash] +---- +[ Starting Feel++ ] application O version 0.111.0-preview.120 date 2026-Jan-14 +[feelpp] create Feel++ root repository: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/3d7c81c1/ThermalBridgesENISO10211 + +[feelpp] create Feel++ geo repository: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/3d7c81c1/ThermalBridgesENISO10211/geo + +[feelpp] create Feel++ expressions directory: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/3d7c81c1/ThermalBridgesENISO10211/exprs + +[feelpp] create Feel++ logs directory: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/3d7c81c1/ThermalBridgesENISO10211/logs + + . O files are stored in /data/scratch/cladellash/feelppdb/app-feelpp-io/io/3d7c81c1/ThermalBridgesENISO10211/ + .. logfiles :/data/scratch/cladellash/feelppdb/app-feelpp-io/io/3d7c81c1/ThermalBridgesENISO10211/logs +[loadMesh] Loading mesh in format json+h5: "/input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M2/case3_p2.json" +[loadMesh] Time : 65.9155s + [create function space] Time : 78.9579s + [create vectorial function space] Time : 144.159s + [save field] Time : 0.0511379s + [save vector field] Time : 0.127428s + [save mesh] Time : 2.27006s + [export time] Time : 96.3184s +Time load mesh 65.9155 +Time load create function space 78.9579 +Time load create vectorial function space 144.159 +Time save mesh 2.27006 +Time save field 0.0511379 +Time save vector field 0.127428 +Time to export 96.3184 ++----------------------------------------------------------------------------------------------------------------------------------------------------+ +| O | ++----------------------------------------------------------------------------------------------------------------------------------------------------+ +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | +| | logs | /data/scratch/cladellash/feelppdb/app-feelpp-io/io/3d7c81c1/ThermalBridgesENISO10211/logs | | +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | +| | journal | /data/scratch/cladellash/feelppdb/app-feelpp-io/io/3d7c81c1/ThermalBridgesENISO10211/journal.json | | +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | +| | directories | +------------------------------------------------------------------------------------------------------------------------------+ | | +| | | | /data/scratch/cladellash/feelppdb/app-feelpp-io/io/3d7c81c1/ThermalBridgesENISO10211/ | | | +| | | +------------------------------------------------------------------------------------------------------------------------------+ | | +| | | | /data/home/cladellash/actions-runner/_work/apps-feelpp/apps-feelpp/reframe/stage/gaya/public/default/RegressionTest_3d7c81c1 | | | +| | | +------------------------------------------------------------------------------------------------------------------------------+ | | +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | ++----------------------------------------------------------------------------------------------------------------------------------------------------+ + +[ Stopping Feel++ ] application O execution time 505.796s + +---- + +== feelpp_app_io.INFO + +[source,bash] +---- +Log file created at: 2026/01/14 16:51:21 +Running on machine: gaya1 +Log line format: [IWEF]mmdd hh:mm:ss.uuuuuu threadid file:line] msg +I0114 16:51:21.008809 938917 environment.cpp:1708] File /input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M2/case3_p2.json found +I0114 16:51:21.011540 938917 loadmesh.hpp:246] Loading mesh in json+h5 format "/input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M2/case3_p2.json" +I0114 16:51:21.067041 938917 partitionio.hpp:1134] read stat points 1430843,715281,0 +I0114 16:51:21.067049 938917 partitionio.hpp:1137] read stat elements 8302113,4151008,0 +I0114 16:51:21.067050 938917 partitionio.hpp:1140] read stat ghost_elements 112920,56412,0 +I0114 16:51:21.067051 938917 partitionio.hpp:1143] read stat marked_faces 374422,187057,0 +I0114 16:51:21.067054 938917 partitionio.hpp:1146] read stat marked_edges 0,0,0 +I0114 16:51:21.067054 938917 partitionio.hpp:1149] read stat marked_points 0,0,0 +I0114 16:51:21.067382 938917 partitionio.hpp:1168] loaded points_ids:1x1430843 +I0114 16:51:21.067694 938917 partitionio.hpp:1170] loaded points_coords:1x4292529 +I0114 16:51:21.337813 938917 partitionio.hpp:1267] loaded elements:1x41510565 +I0114 16:51:25.125986 938917 partitionio.hpp:1373] loaded ghost_elements:1x112920 +I0114 16:51:25.502101 938917 partitionio.hpp:1569] loaded marked_subentities:1x1497688 +I0114 16:51:27.111184 938917 meshimpl.hpp:1051] We have 187057 faces in the database +I0114 16:51:41.623013 938917 meshimpl.hpp:1325] We have now 8406503 faces in the mesh +I0114 16:52:16.204666 938917 meshimpl.hpp:1863] update boundary points... +I0114 16:52:16.672514 938917 meshimpl.hpp:1883] update boundary elements... +I0114 16:52:26.902967 938917 meshimpl.hpp:524] h average : 0.01632 +I0114 16:52:26.903029 938917 meshimpl.hpp:525] h min : 0.0098099 +I0114 16:52:26.903033 938917 meshimpl.hpp:526] h max : 0.0226452 +I0114 16:52:26.944531 938917 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 16:52:28.251046 938917 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 16:52:28.251070 938917 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 16:52:28.289830 938917 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 4094596 on processor 0 +I0114 16:52:59.506026 938917 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 704984 +I0114 16:52:59.506575 938917 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 16:53:09.098079 938917 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 16:53:45.943310 938917 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 16:53:46.294224 938917 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 16:53:46.294246 938917 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 16:53:46.347127 938917 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 4094596 on processor 0 +I0114 16:54:36.070604 938917 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 2114952 +I0114 16:54:36.071141 938917 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 16:54:50.128676 938917 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 16:56:10.102912 938917 element_impl.hpp:199] creating element u : u +I0114 16:56:18.519315 938917 element_impl.hpp:199] creating element {x+y+z,x+y+z,x+y+z}:x:y:z : u +I0114 16:56:18.519981 938917 exporterimpl.hpp:219] [Exporter] format : ensightgold +I0114 16:56:18.519984 938917 exporterimpl.hpp:220] [Exporter] N : 1 +I0114 16:56:19.368778 938917 partitionio.hpp:319] writing mesh in HDF5 format in /data/scratch/cladellash/feelppdb/app-feelpp-io/io/3d7c81c1/ThermalBridgesENISO10211/mesh_0.h5 +I0114 16:56:21.004837 938917 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 16:56:21.493086 938917 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 16:56:21.493109 938917 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 16:56:21.546034 938917 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 4094596 on processor 0 +I0114 16:56:46.615114 938917 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 704984 +I0114 16:56:46.615309 938917 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 16:56:55.612859 938917 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 16:57:26.886663 938917 element_impl.hpp:199] creating element u : u +I0114 16:57:35.474472 938917 element_impl.hpp:199] creating element uV : u +I0114 16:57:35.474997 938917 element_impl.hpp:199] creating element uV : u +I0114 16:57:35.475497 938917 element_impl.hpp:199] creating element uV : u +I0114 16:57:35.669116 938917 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 16:57:35.989060 938917 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 16:57:35.989084 938917 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 16:57:36.112603 938917 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 4094596 on processor 0 +I0114 16:58:01.597389 938917 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 704984 +I0114 16:58:01.597512 938917 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 16:58:09.485595 938917 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 16:59:06.914762 938917 exporterensightgold_impl.hpp:1250] writing part 1 +I0114 16:59:06.997797 938917 exporterensightgold_impl.hpp:1250] writing part 2 +I0114 16:59:07.129819 938917 exporterensightgold_impl.hpp:1250] writing part 3 +I0114 16:59:07.219501 938917 exporterensightgold_impl.hpp:1250] writing part 4 +I0114 16:59:07.327867 938917 exporterensightgold_impl.hpp:1250] writing part 5 +I0114 16:59:07.397773 938917 exporterensightgold_impl.hpp:1250] writing part 6 +I0114 16:59:07.434432 938917 exporterensightgold_impl.hpp:1376] ExporterEnsightGold::writeVariableFiles Nodal: 2 +I0114 16:59:07.434448 938917 exporterensightgold_impl.hpp:1377] ExporterEnsightGold::writeVariableFiles Element: 0 +I0114 16:59:46.529656 938917 environment.cpp:2423] Environment::clearSomeMemory before: PETSC get current memory usage (resident memory): 2.40564e+07 KBytes 24056.4 MBytes 24.0564 GBytes +I0114 16:59:46.529697 938917 environment.cpp:2428] Environment::clearSomeMemory before: PETSC get current PETSC Malloc usage: 0 KBytes 0 MBytes 0 GBytes +I0114 16:59:46.529703 938917 environment.cpp:2430] Environment::clearSomeMemory before: PETSC get maximum PETSC Malloc usage(largest memory ever used so far): 0 KBytes 0 MBytes 0 GBytes +I0114 16:59:46.529740 938917 environment.cpp:2423] Environment::clearSomeMemory after: PETSC get current memory usage (resident memory): 2.40564e+07 KBytes 24056.4 MBytes 24.0564 GBytes +I0114 16:59:46.529743 938917 environment.cpp:2428] Environment::clearSomeMemory after: PETSC get current PETSC Malloc usage: 0 KBytes 0 MBytes 0 GBytes +I0114 16:59:46.529745 938917 environment.cpp:2430] Environment::clearSomeMemory after: PETSC get maximum PETSC Malloc usage(largest memory ever used so far): 0 KBytes 0 MBytes 0 GBytes + +---- +== feelpp_app_io.WARNING + +[source,bash] +---- +Log file created at: 2026/01/14 16:53:09 +Running on machine: gaya1 +Log line format: [IWEF]mmdd hh:mm:ss.uuuuuu threadid file:line] msg +W0114 16:53:09.098079 938917 doftable.hpp:2587] TODO: finish implementation of this case below +W0114 16:54:50.128676 938917 doftable.hpp:2587] TODO: finish implementation of this case below +W0114 16:56:55.612859 938917 doftable.hpp:2587] TODO: finish implementation of this case below +W0114 16:58:09.485595 938917 doftable.hpp:2587] TODO: finish implementation of this case below + +---- + diff --git a/tmp/results/feelpp_app_io/ThermalBridgesENISO10211/gaya/2026_01_14T16_47_36/logs/4134b149.adoc b/tmp/results/feelpp_app_io/ThermalBridgesENISO10211/gaya/2026_01_14T16_47_36/logs/4134b149.adoc new file mode 100644 index 0000000..2cca239 --- /dev/null +++ b/tmp/results/feelpp_app_io/ThermalBridgesENISO10211/gaya/2026_01_14T16_47_36/logs/4134b149.adoc @@ -0,0 +1,302 @@ += ReFrame logs + +== ReFrame scheduler script + +[source,bash] +---- +#!/bin/bash +#SBATCH --job-name="rfm_RegressionTest_4134b149" +#SBATCH --ntasks=64 +#SBATCH --ntasks-per-node=64 +#SBATCH --cpus-per-task=1 +#SBATCH --output=rfm_job.out +#SBATCH --error=rfm_job.err +#SBATCH --exclusive +#SBATCH --partition=public +#SBATCH --threads-per-core=1 +#SBATCH --time=0-00:15:00 +source /etc/profile.d/modules.sh +export PATH=/opt/apptainer/latest/bin/:$PATH +srun --cpus-per-task=1 apptainer exec -B"/data/home/cladellash/actions-runner/_work/apps-feelpp/apps-feelpp/reframe/stage/gaya/public/default/RegressionTest_4134b149:/rfm_workdir" --home /data/scratch/cladellash/feelppdb --bind /data/scratch/cladellash/feelppdb/input_data/:/input_data --env OMP_NUM_THREADS=1 --sharens --bind /opt/:/opt/ --bind /data/:/data/ /data/scratch/cladellash/images//apps-feelpp.sif feelpp_app_io --directory /data/scratch/cladellash/feelppdb/app-feelpp-io/io/4134b149/ThermalBridgesENISO10211 --discretization P1 --repository.append.np 0 --gmsh.filename /input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M2/case3_p64.json --nrun 1 + +---- + +== ReFrame error log + +[source,bash] +---- +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + + +---- + +== ReFrame output log + +[source,bash] +---- +[ Starting Feel++ ] application O version 0.111.0-preview.120 date 2026-Jan-14 +[feelpp] create Feel++ root repository: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/4134b149/ThermalBridgesENISO10211 + +[feelpp] create Feel++ geo repository: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/4134b149/ThermalBridgesENISO10211/geo + +[feelpp] create Feel++ expressions directory: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/4134b149/ThermalBridgesENISO10211/exprs + +[feelpp] create Feel++ logs directory: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/4134b149/ThermalBridgesENISO10211/logs + + . O files are stored in /data/scratch/cladellash/feelppdb/app-feelpp-io/io/4134b149/ThermalBridgesENISO10211/ + .. logfiles :/data/scratch/cladellash/feelppdb/app-feelpp-io/io/4134b149/ThermalBridgesENISO10211/logs +[loadMesh] Loading mesh in format json+h5: "/input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M2/case3_p64.json" +[loadMesh] Time : 4.62436s + [create function space] Time : 2.29872s + [create vectorial function space] Time : 4.88944s + [save field] Time : 0.162697s + [save vector field] Time : 0.58991s + [save mesh] Time : 2.76564s + [export time] Time : 5.37177s +Time load mesh 4.62436 +Time load create function space 2.29872 +Time load create vectorial function space 4.88944 +Time save mesh 2.76564 +Time save field 0.162697 +Time save vector field 0.58991 +Time to export 5.37177 ++----------------------------------------------------------------------------------------------------------------------------------------------------+ +| O | ++----------------------------------------------------------------------------------------------------------------------------------------------------+ +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | +| | logs | /data/scratch/cladellash/feelppdb/app-feelpp-io/io/4134b149/ThermalBridgesENISO10211/logs | | +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | +| | journal | /data/scratch/cladellash/feelppdb/app-feelpp-io/io/4134b149/ThermalBridgesENISO10211/journal.json | | +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | +| | directories | +------------------------------------------------------------------------------------------------------------------------------+ | | +| | | | /data/scratch/cladellash/feelppdb/app-feelpp-io/io/4134b149/ThermalBridgesENISO10211/ | | | +| | | +------------------------------------------------------------------------------------------------------------------------------+ | | +| | | | /data/home/cladellash/actions-runner/_work/apps-feelpp/apps-feelpp/reframe/stage/gaya/public/default/RegressionTest_4134b149 | | | +| | | +------------------------------------------------------------------------------------------------------------------------------+ | | +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | ++----------------------------------------------------------------------------------------------------------------------------------------------------+ + +[ Stopping Feel++ ] application O execution time 25.6558s + +---- + +== feelpp_app_io.INFO + +[source,bash] +---- +Log file created at: 2026/01/14 17:03:37 +Running on machine: gaya4 +Log line format: [IWEF]mmdd hh:mm:ss.uuuuuu threadid file:line] msg +I0114 17:03:37.507269 751217 environment.cpp:1708] File /input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M2/case3_p64.json found +I0114 17:03:37.508761 751217 loadmesh.hpp:246] Loading mesh in json+h5 format "/input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M2/case3_p64.json" +I0114 17:03:37.632944 751217 partitionio.hpp:1134] read stat points 1734688,27541,0 +I0114 17:03:37.632961 751217 partitionio.hpp:1137] read stat elements 9435174,151138,0 +I0114 17:03:37.632962 751217 partitionio.hpp:1140] read stat ghost_elements 1245981,22541,0 +I0114 17:03:37.632964 751217 partitionio.hpp:1143] read stat marked_faces 412280,4842,0 +I0114 17:03:37.632966 751217 partitionio.hpp:1146] read stat marked_edges 0,0,0 +I0114 17:03:37.632967 751217 partitionio.hpp:1149] read stat marked_points 0,0,0 +I0114 17:03:37.635454 751217 partitionio.hpp:1168] loaded points_ids:1x1734688 +I0114 17:03:37.637703 751217 partitionio.hpp:1170] loaded points_coords:1x5204064 +I0114 17:03:37.817024 751217 partitionio.hpp:1267] loaded elements:1x47175870 +I0114 17:03:39.054121 751217 partitionio.hpp:1373] loaded ghost_elements:1x1245981 +I0114 17:03:39.078285 751217 partitionio.hpp:1569] loaded marked_subentities:1x1649120 +I0114 17:03:39.203302 751217 meshimpl.hpp:1051] We have 4842 faces in the database +I0114 17:03:39.684470 751217 meshimpl.hpp:1325] We have now 308767 faces in the mesh +I0114 17:03:41.491847 751217 meshimpl.hpp:1863] update boundary points... +I0114 17:03:41.515885 751217 meshimpl.hpp:1883] update boundary elements... +I0114 17:03:42.084045 751217 meshimpl.hpp:524] h average : 0.01632 +I0114 17:03:42.084075 751217 meshimpl.hpp:525] h min : 0.0098099 +I0114 17:03:42.084079 751217 meshimpl.hpp:526] h max : 0.0226452 +I0114 17:03:42.092833 751217 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 17:03:42.130941 751217 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 17:03:42.130955 751217 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 17:03:42.133374 751217 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 128597 on processor 0 +I0114 17:03:42.812283 751217 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 23333 +I0114 17:03:42.812358 751217 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 17:03:43.433161 751217 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 17:03:44.393831 751217 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 17:03:44.406185 751217 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 17:03:44.406203 751217 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 17:03:44.407855 751217 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 128597 on processor 0 +I0114 17:03:45.635987 751217 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 69999 +I0114 17:03:45.636051 751217 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 17:03:46.713086 751217 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 17:03:49.283326 751217 element_impl.hpp:199] creating element u : u +I0114 17:03:49.712540 751217 element_impl.hpp:199] creating element {x+y+z,x+y+z,x+y+z}:x:y:z : u +I0114 17:03:49.712755 751217 exporterimpl.hpp:219] [Exporter] format : ensightgold +I0114 17:03:49.712759 751217 exporterimpl.hpp:220] [Exporter] N : 1 +I0114 17:03:50.505590 751217 partitionio.hpp:319] writing mesh in HDF5 format in /data/scratch/cladellash/feelppdb/app-feelpp-io/io/4134b149/ThermalBridgesENISO10211/mesh_0.h5 +I0114 17:03:53.239786 751217 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 17:03:53.262465 751217 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 17:03:53.262477 751217 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 17:03:53.265362 751217 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 128597 on processor 0 +I0114 17:03:53.772886 751217 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 23333 +I0114 17:03:53.772953 751217 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 17:03:54.311614 751217 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 17:03:55.065589 751217 element_impl.hpp:199] creating element u : u +I0114 17:03:55.512722 751217 element_impl.hpp:199] creating element uV : u +I0114 17:03:55.512754 751217 element_impl.hpp:199] creating element uV : u +I0114 17:03:55.512775 751217 element_impl.hpp:199] creating element uV : u +I0114 17:03:55.519635 751217 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 17:03:55.534674 751217 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 17:03:55.534686 751217 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 17:03:55.537503 751217 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 128597 on processor 0 +I0114 17:03:56.025748 751217 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 23333 +I0114 17:03:56.025776 751217 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 17:03:56.620086 751217 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 17:03:59.018744 751217 exporterensightgold_impl.hpp:1250] writing part 1 +I0114 17:03:59.484668 751217 exporterensightgold_impl.hpp:1250] writing part 2 +I0114 17:03:59.700995 751217 exporterensightgold_impl.hpp:1250] writing part 3 +I0114 17:03:59.710197 751217 exporterensightgold_impl.hpp:1250] writing part 4 +I0114 17:03:59.804517 751217 exporterensightgold_impl.hpp:1250] writing part 5 +I0114 17:03:59.885454 751217 exporterensightgold_impl.hpp:1250] writing part 6 +I0114 17:03:59.909430 751217 exporterensightgold_impl.hpp:1376] ExporterEnsightGold::writeVariableFiles Nodal: 2 +I0114 17:03:59.909437 751217 exporterensightgold_impl.hpp:1377] ExporterEnsightGold::writeVariableFiles Element: 0 +I0114 17:04:02.388264 751217 environment.cpp:2423] Environment::clearSomeMemory before: PETSC get current memory usage (resident memory): 1.01712e+06 KBytes 1017.12 MBytes 1.01712 GBytes +I0114 17:04:02.388284 751217 environment.cpp:2428] Environment::clearSomeMemory before: PETSC get current PETSC Malloc usage: 0 KBytes 0 MBytes 0 GBytes +I0114 17:04:02.388291 751217 environment.cpp:2430] Environment::clearSomeMemory before: PETSC get maximum PETSC Malloc usage(largest memory ever used so far): 0 KBytes 0 MBytes 0 GBytes +I0114 17:04:02.388432 751217 environment.cpp:2423] Environment::clearSomeMemory after: PETSC get current memory usage (resident memory): 1.01712e+06 KBytes 1017.12 MBytes 1.01712 GBytes +I0114 17:04:02.388439 751217 environment.cpp:2428] Environment::clearSomeMemory after: PETSC get current PETSC Malloc usage: 0 KBytes 0 MBytes 0 GBytes +I0114 17:04:02.388441 751217 environment.cpp:2430] Environment::clearSomeMemory after: PETSC get maximum PETSC Malloc usage(largest memory ever used so far): 0 KBytes 0 MBytes 0 GBytes + +---- +== feelpp_app_io.WARNING + +[source,bash] +---- +Log file created at: 2026/01/14 17:03:43 +Running on machine: gaya4 +Log line format: [IWEF]mmdd hh:mm:ss.uuuuuu threadid file:line] msg +W0114 17:03:43.433161 751217 doftable.hpp:2587] TODO: finish implementation of this case below +W0114 17:03:46.713086 751217 doftable.hpp:2587] TODO: finish implementation of this case below +W0114 17:03:54.311614 751217 doftable.hpp:2587] TODO: finish implementation of this case below +W0114 17:03:56.620086 751217 doftable.hpp:2587] TODO: finish implementation of this case below + +---- + diff --git a/tmp/results/feelpp_app_io/ThermalBridgesENISO10211/gaya/2026_01_14T16_47_36/logs/4735c4f3.adoc b/tmp/results/feelpp_app_io/ThermalBridgesENISO10211/gaya/2026_01_14T16_47_36/logs/4735c4f3.adoc new file mode 100644 index 0000000..0a80ff1 --- /dev/null +++ b/tmp/results/feelpp_app_io/ThermalBridgesENISO10211/gaya/2026_01_14T16_47_36/logs/4735c4f3.adoc @@ -0,0 +1,430 @@ += ReFrame logs + +== ReFrame scheduler script + +[source,bash] +---- +#!/bin/bash +#SBATCH --job-name="rfm_RegressionTest_4735c4f3" +#SBATCH --ntasks=128 +#SBATCH --ntasks-per-node=128 +#SBATCH --cpus-per-task=1 +#SBATCH --output=rfm_job.out +#SBATCH --error=rfm_job.err +#SBATCH --exclusive +#SBATCH --partition=public +#SBATCH --threads-per-core=1 +#SBATCH --time=0-00:15:00 +source /etc/profile.d/modules.sh +export PATH=/opt/apptainer/latest/bin/:$PATH +srun --cpus-per-task=1 apptainer exec -B"/data/home/cladellash/actions-runner/_work/apps-feelpp/apps-feelpp/reframe/stage/gaya/public/default/RegressionTest_4735c4f3:/rfm_workdir" --home /data/scratch/cladellash/feelppdb --bind /data/scratch/cladellash/feelppdb/input_data/:/input_data --env OMP_NUM_THREADS=1 --sharens --bind /opt/:/opt/ --bind /data/:/data/ /data/scratch/cladellash/images//apps-feelpp.sif feelpp_app_io --directory /data/scratch/cladellash/feelppdb/app-feelpp-io/io/4735c4f3/ThermalBridgesENISO10211 --discretization P2 --repository.append.np 0 --gmsh.filename /input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M1/case3_p128.json --nrun 1 + +---- + +== ReFrame error log + +[source,bash] +---- +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + + +---- + +== ReFrame output log + +[source,bash] +---- +[ Starting Feel++ ] application O version 0.111.0-preview.120 date 2026-Jan-14 +[feelpp] create Feel++ root repository: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/4735c4f3/ThermalBridgesENISO10211 + +[feelpp] create Feel++ geo repository: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/4735c4f3/ThermalBridgesENISO10211/geo + +[feelpp] create Feel++ expressions directory: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/4735c4f3/ThermalBridgesENISO10211/exprs + +[feelpp] create Feel++ logs directory: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/4735c4f3/ThermalBridgesENISO10211/logs + + . O files are stored in /data/scratch/cladellash/feelppdb/app-feelpp-io/io/4735c4f3/ThermalBridgesENISO10211/ + .. logfiles :/data/scratch/cladellash/feelppdb/app-feelpp-io/io/4735c4f3/ThermalBridgesENISO10211/logs +[loadMesh] Loading mesh in format json+h5: "/input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M1/case3_p128.json" +[loadMesh] Time : 0.691267s + [create function space] Time : 0.314894s + [create vectorial function space] Time : 0.737705s + [save field] Time : 0.301324s + [save vector field] Time : 0.421513s + [save mesh] Time : 1.10708s + [export time] Time : 3.31309s +Time load mesh 0.691267 +Time load create function space 0.314894 +Time load create vectorial function space 0.737705 +Time save mesh 1.10708 +Time save field 0.301324 +Time save vector field 0.421513 +Time to export 3.31309 ++----------------------------------------------------------------------------------------------------------------------------------------------------+ +| O | ++----------------------------------------------------------------------------------------------------------------------------------------------------+ +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | +| | logs | /data/scratch/cladellash/feelppdb/app-feelpp-io/io/4735c4f3/ThermalBridgesENISO10211/logs | | +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | +| | journal | /data/scratch/cladellash/feelppdb/app-feelpp-io/io/4735c4f3/ThermalBridgesENISO10211/journal.json | | +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | +| | directories | +------------------------------------------------------------------------------------------------------------------------------+ | | +| | | | /data/scratch/cladellash/feelppdb/app-feelpp-io/io/4735c4f3/ThermalBridgesENISO10211/ | | | +| | | +------------------------------------------------------------------------------------------------------------------------------+ | | +| | | | /data/home/cladellash/actions-runner/_work/apps-feelpp/apps-feelpp/reframe/stage/gaya/public/default/RegressionTest_4735c4f3 | | | +| | | +------------------------------------------------------------------------------------------------------------------------------+ | | +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | ++----------------------------------------------------------------------------------------------------------------------------------------------------+ + +[ Stopping Feel++ ] application O execution time 8.84287s + +---- + +== feelpp_app_io.INFO + +[source,bash] +---- +Log file created at: 2026/01/14 16:47:49 +Running on machine: gaya6 +Log line format: [IWEF]mmdd hh:mm:ss.uuuuuu threadid file:line] msg +I0114 16:47:49.083678 703510 environment.cpp:1708] File /input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M1/case3_p128.json found +I0114 16:47:49.091096 703510 loadmesh.hpp:246] Loading mesh in json+h5 format "/input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M1/case3_p128.json" +I0114 16:47:49.254536 703510 partitionio.hpp:1134] read stat points 327433,2761,0 +I0114 16:47:49.254546 703510 partitionio.hpp:1137] read stat elements 1525153,12663,0 +I0114 16:47:49.254549 703510 partitionio.hpp:1140] read stat ghost_elements 466661,4435,0 +I0114 16:47:49.254550 703510 partitionio.hpp:1143] read stat marked_faces 122471,815,0 +I0114 16:47:49.254552 703510 partitionio.hpp:1146] read stat marked_edges 0,0,0 +I0114 16:47:49.254554 703510 partitionio.hpp:1149] read stat marked_points 0,0,0 +I0114 16:47:49.256727 703510 partitionio.hpp:1168] loaded points_ids:1x327433 +I0114 16:47:49.257999 703510 partitionio.hpp:1170] loaded points_coords:1x982299 +I0114 16:47:49.280519 703510 partitionio.hpp:1267] loaded elements:1x7625765 +I0114 16:47:49.314764 703510 partitionio.hpp:1373] loaded ghost_elements:1x466661 +I0114 16:47:49.345790 703510 partitionio.hpp:1569] loaded marked_subentities:1x489884 +I0114 16:47:49.401762 703510 meshimpl.hpp:1051] We have 815 faces in the database +I0114 16:47:49.440086 703510 meshimpl.hpp:1325] We have now 26620 faces in the mesh +I0114 16:47:49.618966 703510 meshimpl.hpp:1863] update boundary points... +I0114 16:47:49.621765 703510 meshimpl.hpp:1883] update boundary elements... +I0114 16:47:49.713845 703510 meshimpl.hpp:524] h average : 0.0325846 +I0114 16:47:49.713891 703510 meshimpl.hpp:525] h min : 0.0175455 +I0114 16:47:49.713893 703510 meshimpl.hpp:526] h max : 0.044348 +I0114 16:47:49.727535 703510 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 16:47:49.731109 703510 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 16:47:49.731115 703510 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 16:47:49.731199 703510 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 8228 on processor 0 +I0114 16:47:49.782289 703510 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 12738 +I0114 16:47:49.782332 703510 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 16:47:49.936132 703510 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 16:47:50.043442 703510 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 16:47:50.044189 703510 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 16:47:50.044194 703510 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 16:47:50.044274 703510 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 8228 on processor 0 +I0114 16:47:50.156867 703510 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 38214 +I0114 16:47:50.156921 703510 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 16:47:50.431859 703510 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 16:47:50.781188 703510 element_impl.hpp:199] creating element u : u +I0114 16:47:50.833235 703510 element_impl.hpp:199] creating element {x+y+z,x+y+z,x+y+z}:x:y:z : u +I0114 16:47:50.833287 703510 exporterimpl.hpp:219] [Exporter] format : ensightgold +I0114 16:47:50.833290 703510 exporterimpl.hpp:220] [Exporter] N : 1 +I0114 16:47:51.563380 703510 partitionio.hpp:319] writing mesh in HDF5 format in /data/scratch/cladellash/feelppdb/app-feelpp-io/io/4735c4f3/ThermalBridgesENISO10211/mesh_0.h5 +I0114 16:47:52.668094 703510 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 16:47:52.670652 703510 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 16:47:52.670660 703510 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 16:47:52.670782 703510 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 8228 on processor 0 +I0114 16:47:52.683104 703510 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 1811 +I0114 16:47:52.683130 703510 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 16:47:52.735414 703510 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 16:47:52.770550 703510 element_impl.hpp:199] creating element u : u +I0114 16:47:52.800544 703510 element_impl.hpp:199] creating element uV : u +I0114 16:47:52.800556 703510 element_impl.hpp:199] creating element uV : u +I0114 16:47:52.800560 703510 element_impl.hpp:199] creating element uV : u +I0114 16:47:52.801120 703510 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 16:47:52.802152 703510 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 16:47:52.802156 703510 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 16:47:52.802246 703510 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 8228 on processor 0 +I0114 16:47:52.845570 703510 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 12738 +I0114 16:47:52.845608 703510 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 16:47:52.965370 703510 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 16:47:53.665859 703510 exporterensightgold_impl.hpp:1250] writing part 1 +I0114 16:47:54.151484 703510 exporterensightgold_impl.hpp:1250] writing part 2 +I0114 16:47:54.550556 703510 exporterensightgold_impl.hpp:1250] writing part 3 +I0114 16:47:54.620101 703510 exporterensightgold_impl.hpp:1250] writing part 4 +I0114 16:47:54.632248 703510 exporterensightgold_impl.hpp:1250] writing part 5 +I0114 16:47:54.642518 703510 exporterensightgold_impl.hpp:1250] writing part 6 +I0114 16:47:54.651089 703510 exporterensightgold_impl.hpp:1376] ExporterEnsightGold::writeVariableFiles Nodal: 2 +I0114 16:47:54.651100 703510 exporterensightgold_impl.hpp:1377] ExporterEnsightGold::writeVariableFiles Element: 0 +I0114 16:47:56.338143 703510 environment.cpp:2423] Environment::clearSomeMemory before: PETSC get current memory usage (resident memory): 656409 KBytes 656.409 MBytes 0.656409 GBytes +I0114 16:47:56.338158 703510 environment.cpp:2428] Environment::clearSomeMemory before: PETSC get current PETSC Malloc usage: 0 KBytes 0 MBytes 0 GBytes +I0114 16:47:56.338166 703510 environment.cpp:2430] Environment::clearSomeMemory before: PETSC get maximum PETSC Malloc usage(largest memory ever used so far): 0 KBytes 0 MBytes 0 GBytes +I0114 16:47:56.338317 703510 environment.cpp:2423] Environment::clearSomeMemory after: PETSC get current memory usage (resident memory): 656409 KBytes 656.409 MBytes 0.656409 GBytes +I0114 16:47:56.338328 703510 environment.cpp:2428] Environment::clearSomeMemory after: PETSC get current PETSC Malloc usage: 0 KBytes 0 MBytes 0 GBytes +I0114 16:47:56.338333 703510 environment.cpp:2430] Environment::clearSomeMemory after: PETSC get maximum PETSC Malloc usage(largest memory ever used so far): 0 KBytes 0 MBytes 0 GBytes + +---- +== feelpp_app_io.WARNING + +[source,bash] +---- +Log file created at: 2026/01/14 16:47:49 +Running on machine: gaya6 +Log line format: [IWEF]mmdd hh:mm:ss.uuuuuu threadid file:line] msg +W0114 16:47:49.936132 703510 doftable.hpp:2587] TODO: finish implementation of this case below +W0114 16:47:50.431859 703510 doftable.hpp:2587] TODO: finish implementation of this case below +W0114 16:47:52.735414 703510 doftable.hpp:2587] TODO: finish implementation of this case below +W0114 16:47:52.965370 703510 doftable.hpp:2587] TODO: finish implementation of this case below + +---- + diff --git a/tmp/results/feelpp_app_io/ThermalBridgesENISO10211/gaya/2026_01_14T16_47_36/logs/4e618e2d.adoc b/tmp/results/feelpp_app_io/ThermalBridgesENISO10211/gaya/2026_01_14T16_47_36/logs/4e618e2d.adoc new file mode 100644 index 0000000..505b282 --- /dev/null +++ b/tmp/results/feelpp_app_io/ThermalBridgesENISO10211/gaya/2026_01_14T16_47_36/logs/4e618e2d.adoc @@ -0,0 +1,171 @@ += ReFrame logs + +== ReFrame scheduler script + +[source,bash] +---- +#!/bin/bash +#SBATCH --job-name="rfm_RegressionTest_4e618e2d" +#SBATCH --ntasks=1 +#SBATCH --ntasks-per-node=1 +#SBATCH --cpus-per-task=1 +#SBATCH --output=rfm_job.out +#SBATCH --error=rfm_job.err +#SBATCH --exclusive +#SBATCH --partition=public +#SBATCH --threads-per-core=1 +#SBATCH --time=0-00:15:00 +source /etc/profile.d/modules.sh +export PATH=/opt/apptainer/latest/bin/:$PATH +srun --cpus-per-task=1 apptainer exec -B"/data/home/cladellash/actions-runner/_work/apps-feelpp/apps-feelpp/reframe/stage/gaya/public/default/RegressionTest_4e618e2d:/rfm_workdir" --home /data/scratch/cladellash/feelppdb --bind /data/scratch/cladellash/feelppdb/input_data/:/input_data --env OMP_NUM_THREADS=1 --sharens --bind /opt/:/opt/ --bind /data/:/data/ /data/scratch/cladellash/images//apps-feelpp.sif feelpp_app_io --directory /data/scratch/cladellash/feelppdb/app-feelpp-io/io/4e618e2d/ThermalBridgesENISO10211 --discretization P1 --repository.append.np 0 --gmsh.filename /input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M1/case3_p1.json --nrun 1 + +---- + +== ReFrame error log + +[source,bash] +---- +Authorization required, but no authorization protocol specified + + +---- + +== ReFrame output log + +[source,bash] +---- +[ Starting Feel++ ] application O version 0.111.0-preview.120 date 2026-Jan-14 +[feelpp] create Feel++ root repository: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/4e618e2d/ThermalBridgesENISO10211 + +[feelpp] create Feel++ geo repository: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/4e618e2d/ThermalBridgesENISO10211/geo + +[feelpp] create Feel++ expressions directory: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/4e618e2d/ThermalBridgesENISO10211/exprs + +[feelpp] create Feel++ logs directory: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/4e618e2d/ThermalBridgesENISO10211/logs + + . O files are stored in /data/scratch/cladellash/feelppdb/app-feelpp-io/io/4e618e2d/ThermalBridgesENISO10211/ + .. logfiles :/data/scratch/cladellash/feelppdb/app-feelpp-io/io/4e618e2d/ThermalBridgesENISO10211/logs +[loadMesh] Loading mesh in format json+h5: "/input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M1/case3_p1.json" +[loadMesh] Time : 12.9123s + [create function space] Time : 8.19637s + [create vectorial function space] Time : 12.7742s + [save field] Time : 0.015437s + [save vector field] Time : 0.0231083s + [save mesh] Time : 0.403797s + [export time] Time : 10.7476s +Time load mesh 12.9123 +Time load create function space 8.19637 +Time load create vectorial function space 12.7742 +Time save mesh 0.403797 +Time save field 0.015437 +Time save vector field 0.0231083 +Time to export 10.7476 ++----------------------------------------------------------------------------------------------------------------------------------------------------+ +| O | ++----------------------------------------------------------------------------------------------------------------------------------------------------+ +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | +| | logs | /data/scratch/cladellash/feelppdb/app-feelpp-io/io/4e618e2d/ThermalBridgesENISO10211/logs | | +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | +| | journal | /data/scratch/cladellash/feelppdb/app-feelpp-io/io/4e618e2d/ThermalBridgesENISO10211/journal.json | | +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | +| | directories | +------------------------------------------------------------------------------------------------------------------------------+ | | +| | | | /data/scratch/cladellash/feelppdb/app-feelpp-io/io/4e618e2d/ThermalBridgesENISO10211/ | | | +| | | +------------------------------------------------------------------------------------------------------------------------------+ | | +| | | | /data/home/cladellash/actions-runner/_work/apps-feelpp/apps-feelpp/reframe/stage/gaya/public/default/RegressionTest_4e618e2d | | | +| | | +------------------------------------------------------------------------------------------------------------------------------+ | | +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | ++----------------------------------------------------------------------------------------------------------------------------------------------------+ + +[ Stopping Feel++ ] application O execution time 59.9712s + +---- + +== feelpp_app_io.INFO + +[source,bash] +---- +Log file created at: 2026/01/14 16:47:43 +Running on machine: gaya1 +Log line format: [IWEF]mmdd hh:mm:ss.uuuuuu threadid file:line] msg +I0114 16:47:43.825996 937054 environment.cpp:1708] File /input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M1/case3_p1.json found +I0114 16:47:43.828001 937054 loadmesh.hpp:246] Loading mesh in json+h5 format "/input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M1/case3_p1.json" +I0114 16:47:43.856588 937054 partitionio.hpp:1134] read stat points 193654,193654,0 +I0114 16:47:43.856595 937054 partitionio.hpp:1137] read stat elements 1058492,1058492,0 +I0114 16:47:43.856597 937054 partitionio.hpp:1140] read stat ghost_elements 0,0,0 +I0114 16:47:43.856598 937054 partitionio.hpp:1143] read stat marked_faces 94934,94934,0 +I0114 16:47:43.856600 937054 partitionio.hpp:1146] read stat marked_edges 0,0,0 +I0114 16:47:43.856601 937054 partitionio.hpp:1149] read stat marked_points 0,0,0 +I0114 16:47:43.856925 937054 partitionio.hpp:1168] loaded points_ids:1x193654 +I0114 16:47:43.857236 937054 partitionio.hpp:1170] loaded points_coords:1x580962 +I0114 16:47:43.934437 937054 partitionio.hpp:1267] loaded elements:1x5292460 +I0114 16:47:44.601738 937054 partitionio.hpp:1569] loaded marked_subentities:1x379736 +I0114 16:47:44.853883 937054 meshimpl.hpp:1051] We have 94934 faces in the database +I0114 16:47:48.163206 937054 meshimpl.hpp:1325] We have now 2164759 faces in the mesh +I0114 16:47:54.308928 937054 meshimpl.hpp:1863] update boundary points... +I0114 16:47:54.421557 937054 meshimpl.hpp:1883] update boundary elements... +I0114 16:47:56.716857 937054 meshimpl.hpp:524] h average : 0.0325846 +I0114 16:47:56.716922 937054 meshimpl.hpp:525] h min : 0.0175455 +I0114 16:47:56.716925 937054 meshimpl.hpp:526] h max : 0.044348 +I0114 16:47:56.734970 937054 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 16:47:56.967312 937054 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 16:47:56.967330 937054 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 16:47:56.976950 937054 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 1058492 on processor 0 +I0114 16:48:01.869216 937054 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 193654 +W0114 16:48:03.537371 937054 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 16:48:04.941658 937054 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 16:48:05.028043 937054 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 16:48:05.028057 937054 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 16:48:05.047731 937054 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 1058492 on processor 0 +I0114 16:48:14.178462 937054 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 580962 +W0114 16:48:17.275955 937054 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 16:48:17.717319 937054 element_impl.hpp:199] creating element u : u +I0114 16:48:18.570444 937054 element_impl.hpp:199] creating element {x+y+z,x+y+z,x+y+z}:x:y:z : u +I0114 16:48:18.570577 937054 exporterimpl.hpp:219] [Exporter] format : ensightgold +I0114 16:48:18.570580 937054 exporterimpl.hpp:220] [Exporter] N : 1 +I0114 16:48:18.741696 937054 partitionio.hpp:319] writing mesh in HDF5 format in /data/scratch/cladellash/feelppdb/app-feelpp-io/io/4e618e2d/ThermalBridgesENISO10211/mesh_0.h5 +I0114 16:48:19.027047 937054 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 16:48:19.134891 937054 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 16:48:19.134908 937054 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 16:48:19.154693 937054 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 1058492 on processor 0 +I0114 16:48:22.919054 937054 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 193654 +W0114 16:48:24.082332 937054 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 16:48:24.284058 937054 element_impl.hpp:199] creating element u : u +I0114 16:48:25.707772 937054 element_impl.hpp:199] creating element uV : u +I0114 16:48:25.707901 937054 element_impl.hpp:199] creating element uV : u +I0114 16:48:25.708015 937054 element_impl.hpp:199] creating element uV : u +I0114 16:48:25.727690 937054 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 16:48:25.806607 937054 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 16:48:25.806622 937054 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 16:48:25.826303 937054 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 1058492 on processor 0 +I0114 16:48:29.646064 937054 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 193654 +W0114 16:48:30.834991 937054 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 16:48:35.448455 937054 exporterensightgold_impl.hpp:1250] writing part 1 +I0114 16:48:35.526419 937054 exporterensightgold_impl.hpp:1250] writing part 2 +I0114 16:48:35.552316 937054 exporterensightgold_impl.hpp:1250] writing part 3 +I0114 16:48:35.574330 937054 exporterensightgold_impl.hpp:1250] writing part 4 +I0114 16:48:35.598124 937054 exporterensightgold_impl.hpp:1250] writing part 5 +I0114 16:48:35.633482 937054 exporterensightgold_impl.hpp:1250] writing part 6 +I0114 16:48:35.830124 937054 exporterensightgold_impl.hpp:1376] ExporterEnsightGold::writeVariableFiles Nodal: 2 +I0114 16:48:35.830132 937054 exporterensightgold_impl.hpp:1377] ExporterEnsightGold::writeVariableFiles Element: 0 +I0114 16:48:43.520119 937054 environment.cpp:2423] Environment::clearSomeMemory before: PETSC get current memory usage (resident memory): 6.25371e+06 KBytes 6253.71 MBytes 6.25371 GBytes +I0114 16:48:43.520139 937054 environment.cpp:2428] Environment::clearSomeMemory before: PETSC get current PETSC Malloc usage: 0 KBytes 0 MBytes 0 GBytes +I0114 16:48:43.520144 937054 environment.cpp:2430] Environment::clearSomeMemory before: PETSC get maximum PETSC Malloc usage(largest memory ever used so far): 0 KBytes 0 MBytes 0 GBytes +I0114 16:48:43.520358 937054 environment.cpp:2423] Environment::clearSomeMemory after: PETSC get current memory usage (resident memory): 6.25371e+06 KBytes 6253.71 MBytes 6.25371 GBytes +I0114 16:48:43.520363 937054 environment.cpp:2428] Environment::clearSomeMemory after: PETSC get current PETSC Malloc usage: 0 KBytes 0 MBytes 0 GBytes +I0114 16:48:43.520365 937054 environment.cpp:2430] Environment::clearSomeMemory after: PETSC get maximum PETSC Malloc usage(largest memory ever used so far): 0 KBytes 0 MBytes 0 GBytes + +---- +== feelpp_app_io.WARNING + +[source,bash] +---- +Log file created at: 2026/01/14 16:48:03 +Running on machine: gaya1 +Log line format: [IWEF]mmdd hh:mm:ss.uuuuuu threadid file:line] msg +W0114 16:48:03.537371 937054 doftable.hpp:2587] TODO: finish implementation of this case below +W0114 16:48:17.275955 937054 doftable.hpp:2587] TODO: finish implementation of this case below +W0114 16:48:24.082332 937054 doftable.hpp:2587] TODO: finish implementation of this case below +W0114 16:48:30.834991 937054 doftable.hpp:2587] TODO: finish implementation of this case below + +---- + diff --git a/tmp/results/feelpp_app_io/ThermalBridgesENISO10211/gaya/2026_01_14T16_47_36/logs/54d703af.adoc b/tmp/results/feelpp_app_io/ThermalBridgesENISO10211/gaya/2026_01_14T16_47_36/logs/54d703af.adoc new file mode 100644 index 0000000..da0f693 --- /dev/null +++ b/tmp/results/feelpp_app_io/ThermalBridgesENISO10211/gaya/2026_01_14T16_47_36/logs/54d703af.adoc @@ -0,0 +1,171 @@ += ReFrame logs + +== ReFrame scheduler script + +[source,bash] +---- +#!/bin/bash +#SBATCH --job-name="rfm_RegressionTest_54d703af" +#SBATCH --ntasks=1 +#SBATCH --ntasks-per-node=1 +#SBATCH --cpus-per-task=1 +#SBATCH --output=rfm_job.out +#SBATCH --error=rfm_job.err +#SBATCH --exclusive +#SBATCH --partition=public +#SBATCH --threads-per-core=1 +#SBATCH --time=0-00:15:00 +source /etc/profile.d/modules.sh +export PATH=/opt/apptainer/latest/bin/:$PATH +srun --cpus-per-task=1 apptainer exec -B"/data/home/cladellash/actions-runner/_work/apps-feelpp/apps-feelpp/reframe/stage/gaya/public/default/RegressionTest_54d703af:/rfm_workdir" --home /data/scratch/cladellash/feelppdb --bind /data/scratch/cladellash/feelppdb/input_data/:/input_data --env OMP_NUM_THREADS=1 --sharens --bind /opt/:/opt/ --bind /data/:/data/ /data/scratch/cladellash/images//apps-feelpp.sif feelpp_app_io --directory /data/scratch/cladellash/feelppdb/app-feelpp-io/io/54d703af/ThermalBridgesENISO10211 --discretization P1 --repository.append.np 0 --gmsh.filename /input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M2/case3_p1.json --nrun 1 + +---- + +== ReFrame error log + +[source,bash] +---- +Authorization required, but no authorization protocol specified + + +---- + +== ReFrame output log + +[source,bash] +---- +[ Starting Feel++ ] application O version 0.111.0-preview.120 date 2026-Jan-14 +[feelpp] create Feel++ root repository: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/54d703af/ThermalBridgesENISO10211 + +[feelpp] create Feel++ geo repository: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/54d703af/ThermalBridgesENISO10211/geo + +[feelpp] create Feel++ expressions directory: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/54d703af/ThermalBridgesENISO10211/exprs + +[feelpp] create Feel++ logs directory: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/54d703af/ThermalBridgesENISO10211/logs + + . O files are stored in /data/scratch/cladellash/feelppdb/app-feelpp-io/io/54d703af/ThermalBridgesENISO10211/ + .. logfiles :/data/scratch/cladellash/feelppdb/app-feelpp-io/io/54d703af/ThermalBridgesENISO10211/logs +[loadMesh] Loading mesh in format json+h5: "/input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M2/case3_p1.json" +[loadMesh] Time : 123.498s + [create function space] Time : 96.7818s + [create vectorial function space] Time : 140.601s + [save field] Time : 0.0496027s + [save vector field] Time : 0.121036s + [save mesh] Time : 3.77444s + [export time] Time : 128.513s +Time load mesh 123.498 +Time load create function space 96.7818 +Time load create vectorial function space 140.601 +Time save mesh 3.77444 +Time save field 0.0496027 +Time save vector field 0.121036 +Time to export 128.513 ++----------------------------------------------------------------------------------------------------------------------------------------------------+ +| O | ++----------------------------------------------------------------------------------------------------------------------------------------------------+ +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | +| | logs | /data/scratch/cladellash/feelppdb/app-feelpp-io/io/54d703af/ThermalBridgesENISO10211/logs | | +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | +| | journal | /data/scratch/cladellash/feelppdb/app-feelpp-io/io/54d703af/ThermalBridgesENISO10211/journal.json | | +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | +| | directories | +------------------------------------------------------------------------------------------------------------------------------+ | | +| | | | /data/scratch/cladellash/feelppdb/app-feelpp-io/io/54d703af/ThermalBridgesENISO10211/ | | | +| | | +------------------------------------------------------------------------------------------------------------------------------+ | | +| | | | /data/home/cladellash/actions-runner/_work/apps-feelpp/apps-feelpp/reframe/stage/gaya/public/default/RegressionTest_54d703af | | | +| | | +------------------------------------------------------------------------------------------------------------------------------+ | | +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | ++----------------------------------------------------------------------------------------------------------------------------------------------------+ + +[ Stopping Feel++ ] application O execution time 662.919s + +---- + +== feelpp_app_io.INFO + +[source,bash] +---- +Log file created at: 2026/01/14 16:47:43 +Running on machine: gaya3 +Log line format: [IWEF]mmdd hh:mm:ss.uuuuuu threadid file:line] msg +I0114 16:47:43.792646 754003 environment.cpp:1708] File /input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M2/case3_p1.json found +I0114 16:47:43.794672 754003 loadmesh.hpp:246] Loading mesh in json+h5 format "/input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M2/case3_p1.json" +I0114 16:47:43.845170 754003 partitionio.hpp:1134] read stat points 1401135,1401135,0 +I0114 16:47:43.845176 754003 partitionio.hpp:1137] read stat elements 8189193,8189193,0 +I0114 16:47:43.845178 754003 partitionio.hpp:1140] read stat ghost_elements 0,0,0 +I0114 16:47:43.845180 754003 partitionio.hpp:1143] read stat marked_faces 374422,374422,0 +I0114 16:47:43.845181 754003 partitionio.hpp:1146] read stat marked_edges 0,0,0 +I0114 16:47:43.845182 754003 partitionio.hpp:1149] read stat marked_points 0,0,0 +I0114 16:47:43.845541 754003 partitionio.hpp:1168] loaded points_ids:1x1401135 +I0114 16:47:43.845845 754003 partitionio.hpp:1170] loaded points_coords:1x4203405 +I0114 16:47:44.361503 754003 partitionio.hpp:1267] loaded elements:1x40945965 +I0114 16:47:51.086270 754003 partitionio.hpp:1569] loaded marked_subentities:1x1497688 +I0114 16:47:53.190917 754003 meshimpl.hpp:1051] We have 374422 faces in the database +I0114 16:48:22.976557 754003 meshimpl.hpp:1325] We have now 16566803 faces in the mesh +I0114 16:49:25.354001 754003 meshimpl.hpp:1863] update boundary points... +I0114 16:49:26.212931 754003 meshimpl.hpp:1883] update boundary elements... +I0114 16:49:47.260478 754003 meshimpl.hpp:524] h average : 0.01632 +I0114 16:49:47.264622 754003 meshimpl.hpp:525] h min : 0.0098099 +I0114 16:49:47.268694 754003 meshimpl.hpp:526] h max : 0.0226452 +I0114 16:49:47.718178 754003 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 16:49:51.570490 754003 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 16:49:51.570506 754003 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 16:49:51.657066 754003 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 8189193 on processor 0 +I0114 16:51:04.451608 754003 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 1401135 +W0114 16:51:21.176405 754003 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 16:51:24.582034 754003 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 16:51:25.300087 754003 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 16:51:25.300102 754003 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 16:51:25.452150 754003 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 8189193 on processor 0 +I0114 16:53:14.560704 754003 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 4203405 +W0114 16:53:42.558166 754003 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 16:53:45.188133 754003 element_impl.hpp:199] creating element u : u +I0114 16:53:54.783192 754003 element_impl.hpp:199] creating element {x+y+z,x+y+z,x+y+z}:x:y:z : u +I0114 16:53:54.784593 754003 exporterimpl.hpp:219] [Exporter] format : ensightgold +I0114 16:53:54.784597 754003 exporterimpl.hpp:220] [Exporter] N : 1 +I0114 16:53:56.648494 754003 partitionio.hpp:319] writing mesh in HDF5 format in /data/scratch/cladellash/feelppdb/app-feelpp-io/io/54d703af/ThermalBridgesENISO10211/mesh_0.h5 +I0114 16:53:58.796777 754003 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 16:53:59.816618 754003 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 16:53:59.816634 754003 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 16:53:59.970901 754003 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 8189193 on processor 0 +I0114 16:54:57.212246 754003 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 1401135 +W0114 16:55:09.773936 754003 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 16:55:11.943133 754003 element_impl.hpp:199] creating element u : u +I0114 16:55:24.956286 754003 element_impl.hpp:199] creating element uV : u +I0114 16:55:24.957340 754003 element_impl.hpp:199] creating element uV : u +I0114 16:55:24.958518 754003 element_impl.hpp:199] creating element uV : u +I0114 16:55:25.098942 754003 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 16:55:25.751902 754003 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 16:55:25.751917 754003 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 16:55:25.903339 754003 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 8189193 on processor 0 +I0114 16:56:24.324728 754003 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 1401135 +W0114 16:56:37.698990 754003 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 16:57:21.217288 754003 exporterensightgold_impl.hpp:1250] writing part 1 +I0114 16:57:21.239991 754003 exporterensightgold_impl.hpp:1250] writing part 2 +I0114 16:57:21.328806 754003 exporterensightgold_impl.hpp:1250] writing part 3 +I0114 16:57:21.411837 754003 exporterensightgold_impl.hpp:1250] writing part 4 +I0114 16:57:21.498076 754003 exporterensightgold_impl.hpp:1250] writing part 5 +I0114 16:57:21.631718 754003 exporterensightgold_impl.hpp:1250] writing part 6 +I0114 16:57:21.696733 754003 exporterensightgold_impl.hpp:1376] ExporterEnsightGold::writeVariableFiles Nodal: 2 +I0114 16:57:21.696748 754003 exporterensightgold_impl.hpp:1377] ExporterEnsightGold::writeVariableFiles Element: 0 +I0114 16:58:46.440181 754003 environment.cpp:2423] Environment::clearSomeMemory before: PETSC get current memory usage (resident memory): 4.71817e+07 KBytes 47181.7 MBytes 47.1817 GBytes +I0114 16:58:46.440398 754003 environment.cpp:2428] Environment::clearSomeMemory before: PETSC get current PETSC Malloc usage: 0 KBytes 0 MBytes 0 GBytes +I0114 16:58:46.440405 754003 environment.cpp:2430] Environment::clearSomeMemory before: PETSC get maximum PETSC Malloc usage(largest memory ever used so far): 0 KBytes 0 MBytes 0 GBytes +I0114 16:58:46.440426 754003 environment.cpp:2423] Environment::clearSomeMemory after: PETSC get current memory usage (resident memory): 4.71817e+07 KBytes 47181.7 MBytes 47.1817 GBytes +I0114 16:58:46.440429 754003 environment.cpp:2428] Environment::clearSomeMemory after: PETSC get current PETSC Malloc usage: 0 KBytes 0 MBytes 0 GBytes +I0114 16:58:46.440431 754003 environment.cpp:2430] Environment::clearSomeMemory after: PETSC get maximum PETSC Malloc usage(largest memory ever used so far): 0 KBytes 0 MBytes 0 GBytes + +---- +== feelpp_app_io.WARNING + +[source,bash] +---- +Log file created at: 2026/01/14 16:51:21 +Running on machine: gaya3 +Log line format: [IWEF]mmdd hh:mm:ss.uuuuuu threadid file:line] msg +W0114 16:51:21.176405 754003 doftable.hpp:2587] TODO: finish implementation of this case below +W0114 16:53:42.558166 754003 doftable.hpp:2587] TODO: finish implementation of this case below +W0114 16:55:09.773936 754003 doftable.hpp:2587] TODO: finish implementation of this case below +W0114 16:56:37.698990 754003 doftable.hpp:2587] TODO: finish implementation of this case below + +---- + diff --git a/tmp/results/feelpp_app_io/ThermalBridgesENISO10211/gaya/2026_01_14T16_47_36/logs/5bc476ec.adoc b/tmp/results/feelpp_app_io/ThermalBridgesENISO10211/gaya/2026_01_14T16_47_36/logs/5bc476ec.adoc new file mode 100644 index 0000000..d278352 --- /dev/null +++ b/tmp/results/feelpp_app_io/ThermalBridgesENISO10211/gaya/2026_01_14T16_47_36/logs/5bc476ec.adoc @@ -0,0 +1,302 @@ += ReFrame logs + +== ReFrame scheduler script + +[source,bash] +---- +#!/bin/bash +#SBATCH --job-name="rfm_RegressionTest_5bc476ec" +#SBATCH --ntasks=64 +#SBATCH --ntasks-per-node=64 +#SBATCH --cpus-per-task=1 +#SBATCH --output=rfm_job.out +#SBATCH --error=rfm_job.err +#SBATCH --exclusive +#SBATCH --partition=public +#SBATCH --threads-per-core=1 +#SBATCH --time=0-00:15:00 +source /etc/profile.d/modules.sh +export PATH=/opt/apptainer/latest/bin/:$PATH +srun --cpus-per-task=1 apptainer exec -B"/data/home/cladellash/actions-runner/_work/apps-feelpp/apps-feelpp/reframe/stage/gaya/public/default/RegressionTest_5bc476ec:/rfm_workdir" --home /data/scratch/cladellash/feelppdb --bind /data/scratch/cladellash/feelppdb/input_data/:/input_data --env OMP_NUM_THREADS=1 --sharens --bind /opt/:/opt/ --bind /data/:/data/ /data/scratch/cladellash/images//apps-feelpp.sif feelpp_app_io --directory /data/scratch/cladellash/feelppdb/app-feelpp-io/io/5bc476ec/ThermalBridgesENISO10211 --discretization P1 --repository.append.np 0 --gmsh.filename /input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M1/case3_p64.json --nrun 1 + +---- + +== ReFrame error log + +[source,bash] +---- +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + + +---- + +== ReFrame output log + +[source,bash] +---- +[ Starting Feel++ ] application O version 0.111.0-preview.120 date 2026-Jan-14 +[feelpp] create Feel++ root repository: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/5bc476ec/ThermalBridgesENISO10211 + +[feelpp] create Feel++ geo repository: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/5bc476ec/ThermalBridgesENISO10211/geo + +[feelpp] create Feel++ expressions directory: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/5bc476ec/ThermalBridgesENISO10211/exprs + +[feelpp] create Feel++ logs directory: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/5bc476ec/ThermalBridgesENISO10211/logs + + . O files are stored in /data/scratch/cladellash/feelppdb/app-feelpp-io/io/5bc476ec/ThermalBridgesENISO10211/ + .. logfiles :/data/scratch/cladellash/feelppdb/app-feelpp-io/io/5bc476ec/ThermalBridgesENISO10211/logs +[loadMesh] Loading mesh in format json+h5: "/input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M1/case3_p64.json" +[loadMesh] Time : 0.861647s + [create function space] Time : 0.178433s + [create vectorial function space] Time : 0.412252s + [save field] Time : 0.352552s + [save vector field] Time : 0.140724s + [save mesh] Time : 0.599248s + [export time] Time : 2.25262s +Time load mesh 0.861647 +Time load create function space 0.178433 +Time load create vectorial function space 0.412252 +Time save mesh 0.599248 +Time save field 0.352552 +Time save vector field 0.140724 +Time to export 2.25262 ++----------------------------------------------------------------------------------------------------------------------------------------------------+ +| O | ++----------------------------------------------------------------------------------------------------------------------------------------------------+ +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | +| | logs | /data/scratch/cladellash/feelppdb/app-feelpp-io/io/5bc476ec/ThermalBridgesENISO10211/logs | | +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | +| | journal | /data/scratch/cladellash/feelppdb/app-feelpp-io/io/5bc476ec/ThermalBridgesENISO10211/journal.json | | +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | +| | directories | +------------------------------------------------------------------------------------------------------------------------------+ | | +| | | | /data/scratch/cladellash/feelppdb/app-feelpp-io/io/5bc476ec/ThermalBridgesENISO10211/ | | | +| | | +------------------------------------------------------------------------------------------------------------------------------+ | | +| | | | /data/home/cladellash/actions-runner/_work/apps-feelpp/apps-feelpp/reframe/stage/gaya/public/default/RegressionTest_5bc476ec | | | +| | | +------------------------------------------------------------------------------------------------------------------------------+ | | +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | ++----------------------------------------------------------------------------------------------------------------------------------------------------+ + +[ Stopping Feel++ ] application O execution time 5.88752s + +---- + +== feelpp_app_io.INFO + +[source,bash] +---- +Log file created at: 2026/01/14 17:03:13 +Running on machine: gaya4 +Log line format: [IWEF]mmdd hh:mm:ss.uuuuuu threadid file:line] msg +I0114 17:03:13.484042 747503 environment.cpp:1708] File /input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M1/case3_p64.json found +I0114 17:03:13.486559 747503 loadmesh.hpp:246] Loading mesh in json+h5 format "/input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M1/case3_p64.json" +I0114 17:03:13.624239 747503 partitionio.hpp:1134] read stat points 282935,4770,0 +I0114 17:03:13.624261 747503 partitionio.hpp:1137] read stat elements 1373142,23529,0 +I0114 17:03:13.624264 747503 partitionio.hpp:1140] read stat ghost_elements 314650,7233,0 +I0114 17:03:13.624265 747503 partitionio.hpp:1143] read stat marked_faces 113753,881,0 +I0114 17:03:13.624267 747503 partitionio.hpp:1146] read stat marked_edges 0,0,0 +I0114 17:03:13.624269 747503 partitionio.hpp:1149] read stat marked_points 0,0,0 +I0114 17:03:13.627131 747503 partitionio.hpp:1168] loaded points_ids:1x282935 +I0114 17:03:13.629434 747503 partitionio.hpp:1170] loaded points_coords:1x848805 +I0114 17:03:13.724632 747503 partitionio.hpp:1267] loaded elements:1x6865710 +I0114 17:03:13.804337 747503 partitionio.hpp:1373] loaded ghost_elements:1x314650 +I0114 17:03:13.820865 747503 partitionio.hpp:1569] loaded marked_subentities:1x455012 +I0114 17:03:13.872256 747503 meshimpl.hpp:1051] We have 881 faces in the database +I0114 17:03:13.926466 747503 meshimpl.hpp:1325] We have now 48867 faces in the mesh +I0114 17:03:14.202611 747503 meshimpl.hpp:1863] update boundary points... +I0114 17:03:14.205535 747503 meshimpl.hpp:1883] update boundary elements... +I0114 17:03:14.281116 747503 meshimpl.hpp:524] h average : 0.0325846 +I0114 17:03:14.281143 747503 meshimpl.hpp:525] h min : 0.0175455 +I0114 17:03:14.281145 747503 meshimpl.hpp:526] h max : 0.044348 +I0114 17:03:14.284955 747503 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 17:03:14.290378 747503 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 17:03:14.290390 747503 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 17:03:14.290680 747503 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 16296 on processor 0 +I0114 17:03:14.323210 747503 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 3335 +I0114 17:03:14.323237 747503 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 17:03:14.401326 747503 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 17:03:14.463924 747503 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 17:03:14.465063 747503 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 17:03:14.465068 747503 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 17:03:14.465189 747503 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 16296 on processor 0 +I0114 17:03:14.526644 747503 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 10005 +I0114 17:03:14.526679 747503 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 17:03:14.690128 747503 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 17:03:14.876200 747503 element_impl.hpp:199] creating element u : u +I0114 17:03:14.913137 747503 element_impl.hpp:199] creating element {x+y+z,x+y+z,x+y+z}:x:y:z : u +I0114 17:03:14.913183 747503 exporterimpl.hpp:219] [Exporter] format : ensightgold +I0114 17:03:14.913185 747503 exporterimpl.hpp:220] [Exporter] N : 1 +I0114 17:03:15.413264 747503 partitionio.hpp:319] writing mesh in HDF5 format in /data/scratch/cladellash/feelppdb/app-feelpp-io/io/5bc476ec/ThermalBridgesENISO10211/mesh_0.h5 +I0114 17:03:16.009630 747503 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 17:03:16.012001 747503 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 17:03:16.012012 747503 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 17:03:16.012313 747503 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 16296 on processor 0 +I0114 17:03:16.041467 747503 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 3335 +I0114 17:03:16.041496 747503 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 17:03:16.116165 747503 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 17:03:16.167055 747503 element_impl.hpp:199] creating element u : u +I0114 17:03:16.201771 747503 element_impl.hpp:199] creating element uV : u +I0114 17:03:16.201789 747503 element_impl.hpp:199] creating element uV : u +I0114 17:03:16.201794 747503 element_impl.hpp:199] creating element uV : u +I0114 17:03:16.202374 747503 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 17:03:16.203958 747503 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 17:03:16.203962 747503 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 17:03:16.204128 747503 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 16296 on processor 0 +I0114 17:03:16.232997 747503 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 3335 +I0114 17:03:16.233021 747503 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 17:03:16.303611 747503 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 17:03:16.784893 747503 exporterensightgold_impl.hpp:1250] writing part 1 +I0114 17:03:17.497543 747503 exporterensightgold_impl.hpp:1250] writing part 2 +I0114 17:03:17.576112 747503 exporterensightgold_impl.hpp:1250] writing part 3 +I0114 17:03:17.585433 747503 exporterensightgold_impl.hpp:1250] writing part 4 +I0114 17:03:17.592111 747503 exporterensightgold_impl.hpp:1250] writing part 5 +I0114 17:03:17.597992 747503 exporterensightgold_impl.hpp:1250] writing part 6 +I0114 17:03:17.603394 747503 exporterensightgold_impl.hpp:1376] ExporterEnsightGold::writeVariableFiles Nodal: 2 +I0114 17:03:17.603399 747503 exporterensightgold_impl.hpp:1377] ExporterEnsightGold::writeVariableFiles Element: 0 +I0114 17:03:18.624260 747503 environment.cpp:2423] Environment::clearSomeMemory before: PETSC get current memory usage (resident memory): 656409 KBytes 656.409 MBytes 0.656409 GBytes +I0114 17:03:18.624276 747503 environment.cpp:2428] Environment::clearSomeMemory before: PETSC get current PETSC Malloc usage: 0 KBytes 0 MBytes 0 GBytes +I0114 17:03:18.624280 747503 environment.cpp:2430] Environment::clearSomeMemory before: PETSC get maximum PETSC Malloc usage(largest memory ever used so far): 0 KBytes 0 MBytes 0 GBytes +I0114 17:03:18.624416 747503 environment.cpp:2423] Environment::clearSomeMemory after: PETSC get current memory usage (resident memory): 656409 KBytes 656.409 MBytes 0.656409 GBytes +I0114 17:03:18.624423 747503 environment.cpp:2428] Environment::clearSomeMemory after: PETSC get current PETSC Malloc usage: 0 KBytes 0 MBytes 0 GBytes +I0114 17:03:18.624425 747503 environment.cpp:2430] Environment::clearSomeMemory after: PETSC get maximum PETSC Malloc usage(largest memory ever used so far): 0 KBytes 0 MBytes 0 GBytes + +---- +== feelpp_app_io.WARNING + +[source,bash] +---- +Log file created at: 2026/01/14 17:03:14 +Running on machine: gaya4 +Log line format: [IWEF]mmdd hh:mm:ss.uuuuuu threadid file:line] msg +W0114 17:03:14.401326 747503 doftable.hpp:2587] TODO: finish implementation of this case below +W0114 17:03:14.690128 747503 doftable.hpp:2587] TODO: finish implementation of this case below +W0114 17:03:16.116165 747503 doftable.hpp:2587] TODO: finish implementation of this case below +W0114 17:03:16.303611 747503 doftable.hpp:2587] TODO: finish implementation of this case below + +---- + diff --git a/tmp/results/feelpp_app_io/ThermalBridgesENISO10211/gaya/2026_01_14T16_47_36/logs/5e2f3b66.adoc b/tmp/results/feelpp_app_io/ThermalBridgesENISO10211/gaya/2026_01_14T16_47_36/logs/5e2f3b66.adoc new file mode 100644 index 0000000..4636645 --- /dev/null +++ b/tmp/results/feelpp_app_io/ThermalBridgesENISO10211/gaya/2026_01_14T16_47_36/logs/5e2f3b66.adoc @@ -0,0 +1,133 @@ += ReFrame logs + +== ReFrame scheduler script + +[source,bash] +---- +#!/bin/bash +#SBATCH --job-name="rfm_RegressionTest_5e2f3b66" +#SBATCH --ntasks=1 +#SBATCH --ntasks-per-node=1 +#SBATCH --cpus-per-task=1 +#SBATCH --output=rfm_job.out +#SBATCH --error=rfm_job.err +#SBATCH --exclusive +#SBATCH --partition=public +#SBATCH --threads-per-core=1 +#SBATCH --time=0-00:15:00 +source /etc/profile.d/modules.sh +export PATH=/opt/apptainer/latest/bin/:$PATH +srun --cpus-per-task=1 apptainer exec -B"/data/home/cladellash/actions-runner/_work/apps-feelpp/apps-feelpp/reframe/stage/gaya/public/default/RegressionTest_5e2f3b66:/rfm_workdir" --home /data/scratch/cladellash/feelppdb --bind /data/scratch/cladellash/feelppdb/input_data/:/input_data --env OMP_NUM_THREADS=1 --sharens --bind /opt/:/opt/ --bind /data/:/data/ /data/scratch/cladellash/images//apps-feelpp.sif feelpp_app_io --directory /data/scratch/cladellash/feelppdb/app-feelpp-io/io/5e2f3b66/ThermalBridgesENISO10211 --discretization P2 --repository.append.np 0 --gmsh.filename /input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M2/case3_p1.json --nrun 1 + +---- + +== ReFrame error log + +[source,bash] +---- +Authorization required, but no authorization protocol specified + +slurmstepd-gaya4: error: *** STEP 32844.0 ON gaya4 CANCELLED AT 2026-01-14T17:03:03 DUE TO TIME LIMIT *** +slurmstepd-gaya4: error: *** JOB 32844 ON gaya4 CANCELLED AT 2026-01-14T17:03:03 DUE TO TIME LIMIT *** +srun: Job step aborted: Waiting up to 32 seconds for job step to finish. +*** Aborted at 1768406583 (unix time) try "date -d @1768406583" if you are using GNU date *** +PC: @ 0x0 (unknown) +srun: got SIGCONT +srun: forcing job termination +srun: error: gaya4: task 0: Exited with exit code 143 + +---- + +== ReFrame output log + +[source,bash] +---- +[ Starting Feel++ ] application O version 0.111.0-preview.120 date 2026-Jan-14 +[feelpp] create Feel++ root repository: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/5e2f3b66/ThermalBridgesENISO10211 + +[feelpp] create Feel++ geo repository: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/5e2f3b66/ThermalBridgesENISO10211/geo + +[feelpp] create Feel++ expressions directory: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/5e2f3b66/ThermalBridgesENISO10211/exprs + +[feelpp] create Feel++ logs directory: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/5e2f3b66/ThermalBridgesENISO10211/logs + + . O files are stored in /data/scratch/cladellash/feelppdb/app-feelpp-io/io/5e2f3b66/ThermalBridgesENISO10211/ + .. logfiles :/data/scratch/cladellash/feelppdb/app-feelpp-io/io/5e2f3b66/ThermalBridgesENISO10211/logs +[loadMesh] Loading mesh in format json+h5: "/input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M2/case3_p1.json" + +---- + +== feelpp_app_io.INFO + +[source,bash] +---- +Log file created at: 2026/01/14 16:47:43 +Running on machine: gaya4 +Log line format: [IWEF]mmdd hh:mm:ss.uuuuuu threadid file:line] msg +I0114 16:47:43.781168 746283 environment.cpp:1708] File /input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M2/case3_p1.json found +I0114 16:47:43.782655 746283 loadmesh.hpp:246] Loading mesh in json+h5 format "/input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M2/case3_p1.json" +I0114 16:47:43.843096 746283 partitionio.hpp:1134] read stat points 1401135,1401135,0 +I0114 16:47:43.843101 746283 partitionio.hpp:1137] read stat elements 8189193,8189193,0 +I0114 16:47:43.843103 746283 partitionio.hpp:1140] read stat ghost_elements 0,0,0 +I0114 16:47:43.843104 746283 partitionio.hpp:1143] read stat marked_faces 374422,374422,0 +I0114 16:47:43.843106 746283 partitionio.hpp:1146] read stat marked_edges 0,0,0 +I0114 16:47:43.843107 746283 partitionio.hpp:1149] read stat marked_points 0,0,0 +I0114 16:47:43.843382 746283 partitionio.hpp:1168] loaded points_ids:1x1401135 +I0114 16:47:43.843657 746283 partitionio.hpp:1170] loaded points_coords:1x4203405 +I0114 16:47:44.327440 746283 partitionio.hpp:1267] loaded elements:1x40945965 +I0114 16:47:51.070066 746283 partitionio.hpp:1569] loaded marked_subentities:1x1497688 +I0114 16:47:53.205888 746283 meshimpl.hpp:1051] We have 374422 faces in the database +I0114 16:48:23.090127 746283 meshimpl.hpp:1325] We have now 16566803 faces in the mesh +I0114 16:49:25.251180 746283 meshimpl.hpp:1863] update boundary points... +I0114 16:49:26.112829 746283 meshimpl.hpp:1883] update boundary elements... +I0114 16:49:47.301452 746283 meshimpl.hpp:524] h average : 0.01632 +I0114 16:49:47.305698 746283 meshimpl.hpp:525] h min : 0.0098099 +I0114 16:49:47.309949 746283 meshimpl.hpp:526] h max : 0.0226452 +I0114 16:49:48.439457 746283 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 16:49:51.225226 746283 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 16:49:51.225244 746283 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 16:49:51.310346 746283 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 8189193 on processor 0 +I0114 16:52:32.176460 746283 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 11179879 +W0114 16:52:55.932806 746283 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 16:52:59.900501 746283 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 16:53:00.879813 746283 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 16:53:00.879828 746283 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 16:53:01.033159 746283 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 8189193 on processor 0 +I0114 16:57:09.540009 746283 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 33539637 +W0114 16:58:02.921981 746283 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 16:58:13.820230 746283 element_impl.hpp:199] creating element u : u +I0114 16:58:26.126809 746283 element_impl.hpp:199] creating element {x+y+z,x+y+z,x+y+z}:x:y:z : u +I0114 16:58:26.141861 746283 exporterimpl.hpp:219] [Exporter] format : ensightgold +I0114 16:58:26.141866 746283 exporterimpl.hpp:220] [Exporter] N : 1 +I0114 16:58:28.900151 746283 partitionio.hpp:319] writing mesh in HDF5 format in /data/scratch/cladellash/feelppdb/app-feelpp-io/io/5e2f3b66/ThermalBridgesENISO10211/mesh_0.h5 +I0114 16:58:31.071527 746283 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 16:58:32.739996 746283 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 16:58:32.740011 746283 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 16:58:33.016345 746283 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 8189193 on processor 0 +I0114 16:59:31.144680 746283 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 1401135 +W0114 16:59:42.929035 746283 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 16:59:44.986533 746283 element_impl.hpp:199] creating element u : u +I0114 17:00:05.462097 746283 element_impl.hpp:199] creating element uV : u +I0114 17:00:05.465559 746283 element_impl.hpp:199] creating element uV : u +I0114 17:00:05.468950 746283 element_impl.hpp:199] creating element uV : u +I0114 17:00:06.420334 746283 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 17:00:07.135007 746283 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 17:00:07.135030 746283 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 17:00:07.291201 746283 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 8189193 on processor 0 +I0114 17:02:38.823580 746283 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 11179879 + +---- +== feelpp_app_io.WARNING + +[source,bash] +---- +Log file created at: 2026/01/14 16:52:55 +Running on machine: gaya4 +Log line format: [IWEF]mmdd hh:mm:ss.uuuuuu threadid file:line] msg +W0114 16:52:55.932806 746283 doftable.hpp:2587] TODO: finish implementation of this case below +W0114 16:58:02.921981 746283 doftable.hpp:2587] TODO: finish implementation of this case below +W0114 16:59:42.929035 746283 doftable.hpp:2587] TODO: finish implementation of this case below +W0114 17:03:01.877701 746283 doftable.hpp:2587] TODO: finish implementation of this case below + +---- + diff --git a/tmp/results/feelpp_app_io/ThermalBridgesENISO10211/gaya/2026_01_14T16_47_36/logs/5f2375ce.adoc b/tmp/results/feelpp_app_io/ThermalBridgesENISO10211/gaya/2026_01_14T16_47_36/logs/5f2375ce.adoc new file mode 100644 index 0000000..86c0cc8 --- /dev/null +++ b/tmp/results/feelpp_app_io/ThermalBridgesENISO10211/gaya/2026_01_14T16_47_36/logs/5f2375ce.adoc @@ -0,0 +1,302 @@ += ReFrame logs + +== ReFrame scheduler script + +[source,bash] +---- +#!/bin/bash +#SBATCH --job-name="rfm_RegressionTest_5f2375ce" +#SBATCH --ntasks=64 +#SBATCH --ntasks-per-node=64 +#SBATCH --cpus-per-task=1 +#SBATCH --output=rfm_job.out +#SBATCH --error=rfm_job.err +#SBATCH --exclusive +#SBATCH --partition=public +#SBATCH --threads-per-core=1 +#SBATCH --time=0-00:15:00 +source /etc/profile.d/modules.sh +export PATH=/opt/apptainer/latest/bin/:$PATH +srun --cpus-per-task=1 apptainer exec -B"/data/home/cladellash/actions-runner/_work/apps-feelpp/apps-feelpp/reframe/stage/gaya/public/default/RegressionTest_5f2375ce:/rfm_workdir" --home /data/scratch/cladellash/feelppdb --bind /data/scratch/cladellash/feelppdb/input_data/:/input_data --env OMP_NUM_THREADS=1 --sharens --bind /opt/:/opt/ --bind /data/:/data/ /data/scratch/cladellash/images//apps-feelpp.sif feelpp_app_io --directory /data/scratch/cladellash/feelppdb/app-feelpp-io/io/5f2375ce/ThermalBridgesENISO10211 --discretization P2 --repository.append.np 0 --gmsh.filename /input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M1/case3_p64.json --nrun 1 + +---- + +== ReFrame error log + +[source,bash] +---- +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + + +---- + +== ReFrame output log + +[source,bash] +---- +[ Starting Feel++ ] application O version 0.111.0-preview.120 date 2026-Jan-14 +[feelpp] create Feel++ root repository: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/5f2375ce/ThermalBridgesENISO10211 + +[feelpp] create Feel++ geo repository: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/5f2375ce/ThermalBridgesENISO10211/geo + +[feelpp] create Feel++ expressions directory: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/5f2375ce/ThermalBridgesENISO10211/exprs + +[feelpp] create Feel++ logs directory: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/5f2375ce/ThermalBridgesENISO10211/logs + + . O files are stored in /data/scratch/cladellash/feelppdb/app-feelpp-io/io/5f2375ce/ThermalBridgesENISO10211/ + .. logfiles :/data/scratch/cladellash/feelppdb/app-feelpp-io/io/5f2375ce/ThermalBridgesENISO10211/logs +[loadMesh] Loading mesh in format json+h5: "/input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M1/case3_p64.json" +[loadMesh] Time : 0.706213s + [create function space] Time : 0.450479s + [create vectorial function space] Time : 1.17811s + [save field] Time : 0.16751s + [save vector field] Time : 0.266477s + [save mesh] Time : 0.571189s + [export time] Time : 2.2454s +Time load mesh 0.706213 +Time load create function space 0.450479 +Time load create vectorial function space 1.17811 +Time save mesh 0.571189 +Time save field 0.16751 +Time save vector field 0.266477 +Time to export 2.2454 ++----------------------------------------------------------------------------------------------------------------------------------------------------+ +| O | ++----------------------------------------------------------------------------------------------------------------------------------------------------+ +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | +| | logs | /data/scratch/cladellash/feelppdb/app-feelpp-io/io/5f2375ce/ThermalBridgesENISO10211/logs | | +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | +| | journal | /data/scratch/cladellash/feelppdb/app-feelpp-io/io/5f2375ce/ThermalBridgesENISO10211/journal.json | | +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | +| | directories | +------------------------------------------------------------------------------------------------------------------------------+ | | +| | | | /data/scratch/cladellash/feelppdb/app-feelpp-io/io/5f2375ce/ThermalBridgesENISO10211/ | | | +| | | +------------------------------------------------------------------------------------------------------------------------------+ | | +| | | | /data/home/cladellash/actions-runner/_work/apps-feelpp/apps-feelpp/reframe/stage/gaya/public/default/RegressionTest_5f2375ce | | | +| | | +------------------------------------------------------------------------------------------------------------------------------+ | | +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | ++----------------------------------------------------------------------------------------------------------------------------------------------------+ + +[ Stopping Feel++ ] application O execution time 6.89835s + +---- + +== feelpp_app_io.INFO + +[source,bash] +---- +Log file created at: 2026/01/14 17:03:24 +Running on machine: gaya4 +Log line format: [IWEF]mmdd hh:mm:ss.uuuuuu threadid file:line] msg +I0114 17:03:24.995761 749237 environment.cpp:1708] File /input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M1/case3_p64.json found +I0114 17:03:25.001657 749237 loadmesh.hpp:246] Loading mesh in json+h5 format "/input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M1/case3_p64.json" +I0114 17:03:25.097055 749237 partitionio.hpp:1134] read stat points 282935,4770,0 +I0114 17:03:25.097070 749237 partitionio.hpp:1137] read stat elements 1373142,23529,0 +I0114 17:03:25.097072 749237 partitionio.hpp:1140] read stat ghost_elements 314650,7233,0 +I0114 17:03:25.097074 749237 partitionio.hpp:1143] read stat marked_faces 113753,881,0 +I0114 17:03:25.097077 749237 partitionio.hpp:1146] read stat marked_edges 0,0,0 +I0114 17:03:25.097079 749237 partitionio.hpp:1149] read stat marked_points 0,0,0 +I0114 17:03:25.099431 749237 partitionio.hpp:1168] loaded points_ids:1x282935 +I0114 17:03:25.101795 749237 partitionio.hpp:1170] loaded points_coords:1x848805 +I0114 17:03:25.119856 749237 partitionio.hpp:1267] loaded elements:1x6865710 +I0114 17:03:25.164438 749237 partitionio.hpp:1373] loaded ghost_elements:1x314650 +I0114 17:03:25.192075 749237 partitionio.hpp:1569] loaded marked_subentities:1x455012 +I0114 17:03:25.235134 749237 meshimpl.hpp:1051] We have 881 faces in the database +I0114 17:03:25.290217 749237 meshimpl.hpp:1325] We have now 48867 faces in the mesh +I0114 17:03:25.575510 749237 meshimpl.hpp:1863] update boundary points... +I0114 17:03:25.578893 749237 meshimpl.hpp:1883] update boundary elements... +I0114 17:03:25.653388 749237 meshimpl.hpp:524] h average : 0.0325846 +I0114 17:03:25.653414 749237 meshimpl.hpp:525] h min : 0.0175455 +I0114 17:03:25.653416 749237 meshimpl.hpp:526] h max : 0.044348 +I0114 17:03:25.663672 749237 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 17:03:25.669370 749237 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 17:03:25.669378 749237 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 17:03:25.669677 749237 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 16296 on processor 0 +I0114 17:03:25.762706 749237 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 24305 +I0114 17:03:25.762748 749237 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 17:03:25.946969 749237 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 17:03:26.115103 749237 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 17:03:26.117604 749237 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 17:03:26.117609 749237 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 17:03:26.117794 749237 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 16296 on processor 0 +I0114 17:03:26.330786 749237 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 72915 +I0114 17:03:26.330847 749237 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 17:03:26.736581 749237 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 17:03:27.293282 749237 element_impl.hpp:199] creating element u : u +I0114 17:03:27.366063 749237 element_impl.hpp:199] creating element {x+y+z,x+y+z,x+y+z}:x:y:z : u +I0114 17:03:27.366120 749237 exporterimpl.hpp:219] [Exporter] format : ensightgold +I0114 17:03:27.366123 749237 exporterimpl.hpp:220] [Exporter] N : 1 +I0114 17:03:27.807238 749237 partitionio.hpp:319] writing mesh in HDF5 format in /data/scratch/cladellash/feelppdb/app-feelpp-io/io/5f2375ce/ThermalBridgesENISO10211/mesh_0.h5 +I0114 17:03:28.374989 749237 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 17:03:28.379279 749237 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 17:03:28.379287 749237 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 17:03:28.379500 749237 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 16296 on processor 0 +I0114 17:03:28.406021 749237 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 3335 +I0114 17:03:28.406070 749237 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 17:03:28.481622 749237 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 17:03:28.531220 749237 element_impl.hpp:199] creating element u : u +I0114 17:03:28.573872 749237 element_impl.hpp:199] creating element uV : u +I0114 17:03:28.573899 749237 element_impl.hpp:199] creating element uV : u +I0114 17:03:28.573904 749237 element_impl.hpp:199] creating element uV : u +I0114 17:03:28.574772 749237 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 17:03:28.576514 749237 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 17:03:28.576519 749237 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 17:03:28.576749 749237 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 16296 on processor 0 +I0114 17:03:28.662405 749237 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 24305 +I0114 17:03:28.662457 749237 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 17:03:28.841363 749237 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 17:03:29.626279 749237 exporterensightgold_impl.hpp:1250] writing part 1 +I0114 17:03:29.838030 749237 exporterensightgold_impl.hpp:1250] writing part 2 +I0114 17:03:29.965754 749237 exporterensightgold_impl.hpp:1250] writing part 3 +I0114 17:03:29.995499 749237 exporterensightgold_impl.hpp:1250] writing part 4 +I0114 17:03:30.006718 749237 exporterensightgold_impl.hpp:1250] writing part 5 +I0114 17:03:30.012583 749237 exporterensightgold_impl.hpp:1250] writing part 6 +I0114 17:03:30.017733 749237 exporterensightgold_impl.hpp:1376] ExporterEnsightGold::writeVariableFiles Nodal: 2 +I0114 17:03:30.017737 749237 exporterensightgold_impl.hpp:1377] ExporterEnsightGold::writeVariableFiles Element: 0 +I0114 17:03:31.179091 749237 environment.cpp:2423] Environment::clearSomeMemory before: PETSC get current memory usage (resident memory): 656409 KBytes 656.409 MBytes 0.656409 GBytes +I0114 17:03:31.179114 749237 environment.cpp:2428] Environment::clearSomeMemory before: PETSC get current PETSC Malloc usage: 0 KBytes 0 MBytes 0 GBytes +I0114 17:03:31.179119 749237 environment.cpp:2430] Environment::clearSomeMemory before: PETSC get maximum PETSC Malloc usage(largest memory ever used so far): 0 KBytes 0 MBytes 0 GBytes +I0114 17:03:31.179257 749237 environment.cpp:2423] Environment::clearSomeMemory after: PETSC get current memory usage (resident memory): 656409 KBytes 656.409 MBytes 0.656409 GBytes +I0114 17:03:31.179263 749237 environment.cpp:2428] Environment::clearSomeMemory after: PETSC get current PETSC Malloc usage: 0 KBytes 0 MBytes 0 GBytes +I0114 17:03:31.179266 749237 environment.cpp:2430] Environment::clearSomeMemory after: PETSC get maximum PETSC Malloc usage(largest memory ever used so far): 0 KBytes 0 MBytes 0 GBytes + +---- +== feelpp_app_io.WARNING + +[source,bash] +---- +Log file created at: 2026/01/14 17:03:25 +Running on machine: gaya4 +Log line format: [IWEF]mmdd hh:mm:ss.uuuuuu threadid file:line] msg +W0114 17:03:25.946969 749237 doftable.hpp:2587] TODO: finish implementation of this case below +W0114 17:03:26.736581 749237 doftable.hpp:2587] TODO: finish implementation of this case below +W0114 17:03:28.481622 749237 doftable.hpp:2587] TODO: finish implementation of this case below +W0114 17:03:28.841363 749237 doftable.hpp:2587] TODO: finish implementation of this case below + +---- + diff --git a/tmp/results/feelpp_app_io/ThermalBridgesENISO10211/gaya/2026_01_14T16_47_36/logs/62077b0c.adoc b/tmp/results/feelpp_app_io/ThermalBridgesENISO10211/gaya/2026_01_14T16_47_36/logs/62077b0c.adoc new file mode 100644 index 0000000..56f6479 --- /dev/null +++ b/tmp/results/feelpp_app_io/ThermalBridgesENISO10211/gaya/2026_01_14T16_47_36/logs/62077b0c.adoc @@ -0,0 +1,190 @@ += ReFrame logs + +== ReFrame scheduler script + +[source,bash] +---- +#!/bin/bash +#SBATCH --job-name="rfm_RegressionTest_62077b0c" +#SBATCH --ntasks=8 +#SBATCH --ntasks-per-node=8 +#SBATCH --cpus-per-task=1 +#SBATCH --output=rfm_job.out +#SBATCH --error=rfm_job.err +#SBATCH --exclusive +#SBATCH --partition=public +#SBATCH --threads-per-core=1 +#SBATCH --time=0-00:15:00 +source /etc/profile.d/modules.sh +export PATH=/opt/apptainer/latest/bin/:$PATH +srun --cpus-per-task=1 apptainer exec -B"/data/home/cladellash/actions-runner/_work/apps-feelpp/apps-feelpp/reframe/stage/gaya/public/default/RegressionTest_62077b0c:/rfm_workdir" --home /data/scratch/cladellash/feelppdb --bind /data/scratch/cladellash/feelppdb/input_data/:/input_data --env OMP_NUM_THREADS=1 --sharens --bind /opt/:/opt/ --bind /data/:/data/ /data/scratch/cladellash/images//apps-feelpp.sif feelpp_app_io --directory /data/scratch/cladellash/feelppdb/app-feelpp-io/io/62077b0c/ThermalBridgesENISO10211 --discretization P2 --repository.append.np 0 --gmsh.filename /input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M1/case3_p8.json --nrun 1 + +---- + +== ReFrame error log + +[source,bash] +---- +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + + +---- + +== ReFrame output log + +[source,bash] +---- +[ Starting Feel++ ] application O version 0.111.0-preview.120 date 2026-Jan-14 +[feelpp] create Feel++ root repository: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/62077b0c/ThermalBridgesENISO10211 + +[feelpp] create Feel++ geo repository: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/62077b0c/ThermalBridgesENISO10211/geo + +[feelpp] create Feel++ expressions directory: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/62077b0c/ThermalBridgesENISO10211/exprs + +[feelpp] create Feel++ logs directory: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/62077b0c/ThermalBridgesENISO10211/logs + + . O files are stored in /data/scratch/cladellash/feelppdb/app-feelpp-io/io/62077b0c/ThermalBridgesENISO10211/ + .. logfiles :/data/scratch/cladellash/feelppdb/app-feelpp-io/io/62077b0c/ThermalBridgesENISO10211/logs +[loadMesh] Loading mesh in format json+h5: "/input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M1/case3_p8.json" +[loadMesh] Time : 2.27178s + [create function space] Time : 3.65541s + [create vectorial function space] Time : 8.66496s + [save field] Time : 0.068079s + [save vector field] Time : 0.157264s + [save mesh] Time : 0.324025s + [export time] Time : 4.9543s +Time load mesh 2.27178 +Time load create function space 3.65541 +Time load create vectorial function space 8.66496 +Time save mesh 0.324025 +Time save field 0.068079 +Time save vector field 0.157264 +Time to export 4.9543 ++----------------------------------------------------------------------------------------------------------------------------------------------------+ +| O | ++----------------------------------------------------------------------------------------------------------------------------------------------------+ +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | +| | logs | /data/scratch/cladellash/feelppdb/app-feelpp-io/io/62077b0c/ThermalBridgesENISO10211/logs | | +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | +| | journal | /data/scratch/cladellash/feelppdb/app-feelpp-io/io/62077b0c/ThermalBridgesENISO10211/journal.json | | +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | +| | directories | +------------------------------------------------------------------------------------------------------------------------------+ | | +| | | | /data/scratch/cladellash/feelppdb/app-feelpp-io/io/62077b0c/ThermalBridgesENISO10211/ | | | +| | | +------------------------------------------------------------------------------------------------------------------------------+ | | +| | | | /data/home/cladellash/actions-runner/_work/apps-feelpp/apps-feelpp/reframe/stage/gaya/public/default/RegressionTest_62077b0c | | | +| | | +------------------------------------------------------------------------------------------------------------------------------+ | | +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | ++----------------------------------------------------------------------------------------------------------------------------------------------------+ + +[ Stopping Feel++ ] application O execution time 24.0898s + +---- + +== feelpp_app_io.INFO + +[source,bash] +---- +Log file created at: 2026/01/14 17:07:11 +Running on machine: gaya2 +Log line format: [IWEF]mmdd hh:mm:ss.uuuuuu threadid file:line] msg +I0114 17:07:11.382841 473096 environment.cpp:1708] File /input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M1/case3_p8.json found +I0114 17:07:11.384352 473096 loadmesh.hpp:246] Loading mesh in json+h5 format "/input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M1/case3_p8.json" +I0114 17:07:11.419245 473096 partitionio.hpp:1134] read stat points 217851,26450,0 +I0114 17:07:11.419255 473096 partitionio.hpp:1137] read stat elements 1145402,140471,0 +I0114 17:07:11.419255 473096 partitionio.hpp:1140] read stat ghost_elements 86910,8159,0 +I0114 17:07:11.419257 473096 partitionio.hpp:1143] read stat marked_faces 94934,12315,0 +I0114 17:07:11.419260 473096 partitionio.hpp:1146] read stat marked_edges 0,0,0 +I0114 17:07:11.419260 473096 partitionio.hpp:1149] read stat marked_points 0,0,0 +I0114 17:07:11.419674 473096 partitionio.hpp:1168] loaded points_ids:1x217851 +I0114 17:07:11.420060 473096 partitionio.hpp:1170] loaded points_coords:1x653553 +I0114 17:07:11.433833 473096 partitionio.hpp:1267] loaded elements:1x5727010 +I0114 17:07:11.544318 473096 partitionio.hpp:1373] loaded ghost_elements:1x86910 +I0114 17:07:11.549446 473096 partitionio.hpp:1569] loaded marked_subentities:1x379736 +I0114 17:07:11.606113 473096 meshimpl.hpp:1051] We have 12315 faces in the database +I0114 17:07:11.990460 473096 meshimpl.hpp:1325] We have now 288566 faces in the mesh +I0114 17:07:13.092761 473096 meshimpl.hpp:1863] update boundary points... +I0114 17:07:13.109915 473096 meshimpl.hpp:1883] update boundary elements... +I0114 17:07:13.631419 473096 meshimpl.hpp:524] h average : 0.0325846 +I0114 17:07:13.631464 473096 meshimpl.hpp:525] h min : 0.0175455 +I0114 17:07:13.631467 473096 meshimpl.hpp:526] h max : 0.044348 +I0114 17:07:13.643296 473096 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 17:07:13.671129 473096 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 17:07:13.671145 473096 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 17:07:13.672401 473096 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 132312 on processor 0 +I0114 17:07:15.003607 473096 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 189178 +I0114 17:07:15.003773 473096 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 17:07:15.672312 473096 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 17:07:17.300871 473096 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 17:07:17.314666 473096 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 17:07:17.314677 473096 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 17:07:17.316665 473096 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 132312 on processor 0 +I0114 17:07:20.094331 473096 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 567534 +I0114 17:07:20.094448 473096 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 17:07:21.460078 473096 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 17:07:25.966079 473096 element_impl.hpp:199] creating element u : u +I0114 17:07:26.357208 473096 element_impl.hpp:199] creating element {x+y+z,x+y+z,x+y+z}:x:y:z : u +I0114 17:07:26.357393 473096 exporterimpl.hpp:219] [Exporter] format : ensightgold +I0114 17:07:26.357396 473096 exporterimpl.hpp:220] [Exporter] N : 1 +I0114 17:07:26.635252 473096 partitionio.hpp:319] writing mesh in HDF5 format in /data/scratch/cladellash/feelppdb/app-feelpp-io/io/62077b0c/ThermalBridgesENISO10211/mesh_0.h5 +I0114 17:07:26.917392 473096 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 17:07:26.940007 473096 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 17:07:26.940022 473096 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 17:07:26.941190 473096 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 132312 on processor 0 +I0114 17:07:27.322646 473096 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 24868 +I0114 17:07:27.322695 473096 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 17:07:27.618726 473096 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 17:07:28.141034 473096 element_impl.hpp:199] creating element u : u +I0114 17:07:28.446013 473096 element_impl.hpp:199] creating element uV : u +I0114 17:07:28.446036 473096 element_impl.hpp:199] creating element uV : u +I0114 17:07:28.446045 473096 element_impl.hpp:199] creating element uV : u +I0114 17:07:28.450232 473096 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 17:07:28.460976 473096 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 17:07:28.460991 473096 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 17:07:28.463128 473096 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 132312 on processor 0 +I0114 17:07:29.787894 473096 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 189178 +I0114 17:07:29.787945 473096 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 17:07:30.380507 473096 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 17:07:33.019030 473096 exporterensightgold_impl.hpp:1250] writing part 1 +I0114 17:07:33.060314 473096 exporterensightgold_impl.hpp:1250] writing part 2 +I0114 17:07:33.114632 473096 exporterensightgold_impl.hpp:1250] writing part 3 +I0114 17:07:33.136700 473096 exporterensightgold_impl.hpp:1250] writing part 4 +I0114 17:07:33.170069 473096 exporterensightgold_impl.hpp:1250] writing part 5 +I0114 17:07:33.181843 473096 exporterensightgold_impl.hpp:1250] writing part 6 +I0114 17:07:33.189823 473096 exporterensightgold_impl.hpp:1376] ExporterEnsightGold::writeVariableFiles Nodal: 2 +I0114 17:07:33.189828 473096 exporterensightgold_impl.hpp:1377] ExporterEnsightGold::writeVariableFiles Element: 0 +I0114 17:07:35.190244 473096 environment.cpp:2423] Environment::clearSomeMemory before: PETSC get current memory usage (resident memory): 1.40929e+06 KBytes 1409.29 MBytes 1.40929 GBytes +I0114 17:07:35.190267 473096 environment.cpp:2428] Environment::clearSomeMemory before: PETSC get current PETSC Malloc usage: 0 KBytes 0 MBytes 0 GBytes +I0114 17:07:35.190274 473096 environment.cpp:2430] Environment::clearSomeMemory before: PETSC get maximum PETSC Malloc usage(largest memory ever used so far): 0 KBytes 0 MBytes 0 GBytes +I0114 17:07:35.190485 473096 environment.cpp:2423] Environment::clearSomeMemory after: PETSC get current memory usage (resident memory): 1.40929e+06 KBytes 1409.29 MBytes 1.40929 GBytes +I0114 17:07:35.190491 473096 environment.cpp:2428] Environment::clearSomeMemory after: PETSC get current PETSC Malloc usage: 0 KBytes 0 MBytes 0 GBytes +I0114 17:07:35.190493 473096 environment.cpp:2430] Environment::clearSomeMemory after: PETSC get maximum PETSC Malloc usage(largest memory ever used so far): 0 KBytes 0 MBytes 0 GBytes + +---- +== feelpp_app_io.WARNING + +[source,bash] +---- +Log file created at: 2026/01/14 17:07:15 +Running on machine: gaya2 +Log line format: [IWEF]mmdd hh:mm:ss.uuuuuu threadid file:line] msg +W0114 17:07:15.672312 473096 doftable.hpp:2587] TODO: finish implementation of this case below +W0114 17:07:21.460078 473096 doftable.hpp:2587] TODO: finish implementation of this case below +W0114 17:07:27.618726 473096 doftable.hpp:2587] TODO: finish implementation of this case below +W0114 17:07:30.380507 473096 doftable.hpp:2587] TODO: finish implementation of this case below + +---- + diff --git a/tmp/results/feelpp_app_io/ThermalBridgesENISO10211/gaya/2026_01_14T16_47_36/logs/6492147f.adoc b/tmp/results/feelpp_app_io/ThermalBridgesENISO10211/gaya/2026_01_14T16_47_36/logs/6492147f.adoc new file mode 100644 index 0000000..28b32ea --- /dev/null +++ b/tmp/results/feelpp_app_io/ThermalBridgesENISO10211/gaya/2026_01_14T16_47_36/logs/6492147f.adoc @@ -0,0 +1,430 @@ += ReFrame logs + +== ReFrame scheduler script + +[source,bash] +---- +#!/bin/bash +#SBATCH --job-name="rfm_RegressionTest_6492147f" +#SBATCH --ntasks=128 +#SBATCH --ntasks-per-node=128 +#SBATCH --cpus-per-task=1 +#SBATCH --output=rfm_job.out +#SBATCH --error=rfm_job.err +#SBATCH --exclusive +#SBATCH --partition=public +#SBATCH --threads-per-core=1 +#SBATCH --time=0-00:15:00 +source /etc/profile.d/modules.sh +export PATH=/opt/apptainer/latest/bin/:$PATH +srun --cpus-per-task=1 apptainer exec -B"/data/home/cladellash/actions-runner/_work/apps-feelpp/apps-feelpp/reframe/stage/gaya/public/default/RegressionTest_6492147f:/rfm_workdir" --home /data/scratch/cladellash/feelppdb --bind /data/scratch/cladellash/feelppdb/input_data/:/input_data --env OMP_NUM_THREADS=1 --sharens --bind /opt/:/opt/ --bind /data/:/data/ /data/scratch/cladellash/images//apps-feelpp.sif feelpp_app_io --directory /data/scratch/cladellash/feelppdb/app-feelpp-io/io/6492147f/ThermalBridgesENISO10211 --discretization P2 --repository.append.np 0 --gmsh.filename /input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M2/case3_p128.json --nrun 1 + +---- + +== ReFrame error log + +[source,bash] +---- +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + + +---- + +== ReFrame output log + +[source,bash] +---- +[ Starting Feel++ ] application O version 0.111.0-preview.120 date 2026-Jan-14 +[feelpp] create Feel++ root repository: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/6492147f/ThermalBridgesENISO10211 + +[feelpp] create Feel++ geo repository: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/6492147f/ThermalBridgesENISO10211/geo + +[feelpp] create Feel++ expressions directory: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/6492147f/ThermalBridgesENISO10211/exprs + +[feelpp] create Feel++ logs directory: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/6492147f/ThermalBridgesENISO10211/logs + + . O files are stored in /data/scratch/cladellash/feelppdb/app-feelpp-io/io/6492147f/ThermalBridgesENISO10211/ + .. logfiles :/data/scratch/cladellash/feelppdb/app-feelpp-io/io/6492147f/ThermalBridgesENISO10211/logs +[loadMesh] Loading mesh in format json+h5: "/input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M2/case3_p128.json" +[loadMesh] Time : 2.86871s + [create function space] Time : 2.71816s + [create vectorial function space] Time : 6.32366s + [save field] Time : 0.681648s + [save vector field] Time : 1.35352s + [save mesh] Time : 2.27273s + [export time] Time : 7.4115s +Time load mesh 2.86871 +Time load create function space 2.71816 +Time load create vectorial function space 6.32366 +Time save mesh 2.27273 +Time save field 0.681648 +Time save vector field 1.35352 +Time to export 7.4115 ++----------------------------------------------------------------------------------------------------------------------------------------------------+ +| O | ++----------------------------------------------------------------------------------------------------------------------------------------------------+ +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | +| | logs | /data/scratch/cladellash/feelppdb/app-feelpp-io/io/6492147f/ThermalBridgesENISO10211/logs | | +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | +| | journal | /data/scratch/cladellash/feelppdb/app-feelpp-io/io/6492147f/ThermalBridgesENISO10211/journal.json | | +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | +| | directories | +------------------------------------------------------------------------------------------------------------------------------+ | | +| | | | /data/scratch/cladellash/feelppdb/app-feelpp-io/io/6492147f/ThermalBridgesENISO10211/ | | | +| | | +------------------------------------------------------------------------------------------------------------------------------+ | | +| | | | /data/home/cladellash/actions-runner/_work/apps-feelpp/apps-feelpp/reframe/stage/gaya/public/default/RegressionTest_6492147f | | | +| | | +------------------------------------------------------------------------------------------------------------------------------+ | | +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | ++----------------------------------------------------------------------------------------------------------------------------------------------------+ + +[ Stopping Feel++ ] application O execution time 28.578s + +---- + +== feelpp_app_io.INFO + +[source,bash] +---- +Log file created at: 2026/01/14 16:48:06 +Running on machine: gaya6 +Log line format: [IWEF]mmdd hh:mm:ss.uuuuuu threadid file:line] msg +I0114 16:48:06.367712 706813 environment.cpp:1708] File /input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M2/case3_p128.json found +I0114 16:48:06.369822 706813 loadmesh.hpp:246] Loading mesh in json+h5 format "/input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M2/case3_p128.json" +I0114 16:48:06.516639 706813 partitionio.hpp:1134] read stat points 1888238,15652,0 +I0114 16:48:06.516649 706813 partitionio.hpp:1137] read stat elements 9998789,83104,0 +I0114 16:48:06.516650 706813 partitionio.hpp:1140] read stat ghost_elements 1809596,18434,0 +I0114 16:48:06.516652 706813 partitionio.hpp:1143] read stat marked_faces 429035,2082,0 +I0114 16:48:06.516654 706813 partitionio.hpp:1146] read stat marked_edges 0,0,0 +I0114 16:48:06.516656 706813 partitionio.hpp:1149] read stat marked_points 0,0,0 +I0114 16:48:06.517872 706813 partitionio.hpp:1168] loaded points_ids:1x1888238 +I0114 16:48:06.520974 706813 partitionio.hpp:1170] loaded points_coords:1x5664714 +I0114 16:48:06.597723 706813 partitionio.hpp:1267] loaded elements:1x49993945 +I0114 16:48:06.917160 706813 partitionio.hpp:1373] loaded ghost_elements:1x1809596 +I0114 16:48:07.209890 706813 partitionio.hpp:1569] loaded marked_subentities:1x1716140 +I0114 16:48:07.388679 706813 meshimpl.hpp:1051] We have 2082 faces in the database +I0114 16:48:07.651875 706813 meshimpl.hpp:1325] We have now 170652 faces in the mesh +I0114 16:48:08.868265 706813 meshimpl.hpp:1863] update boundary points... +I0114 16:48:08.881381 706813 meshimpl.hpp:1883] update boundary elements... +I0114 16:48:09.169610 706813 meshimpl.hpp:524] h average : 0.01632 +I0114 16:48:09.169639 706813 meshimpl.hpp:525] h min : 0.0098099 +I0114 16:48:09.169642 706813 meshimpl.hpp:526] h max : 0.0226452 +I0114 16:48:09.183415 706813 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 16:48:09.214746 706813 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 16:48:09.214756 706813 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 16:48:09.215718 706813 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 64670 on processor 0 +I0114 16:48:09.876452 706813 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 92523 +I0114 16:48:09.876515 706813 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 16:48:10.731263 706813 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 16:48:11.903234 706813 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 16:48:11.912618 706813 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 16:48:11.912640 706813 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 16:48:11.913620 706813 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 64670 on processor 0 +I0114 16:48:13.263746 706813 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 277569 +I0114 16:48:13.263816 706813 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 16:48:14.995033 706813 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 16:48:18.227073 706813 element_impl.hpp:199] creating element u : u +I0114 16:48:18.561618 706813 element_impl.hpp:199] creating element {x+y+z,x+y+z,x+y+z}:x:y:z : u +I0114 16:48:18.561735 706813 exporterimpl.hpp:219] [Exporter] format : ensightgold +I0114 16:48:18.561739 706813 exporterimpl.hpp:220] [Exporter] N : 1 +I0114 16:48:20.623476 706813 partitionio.hpp:319] writing mesh in HDF5 format in /data/scratch/cladellash/feelppdb/app-feelpp-io/io/6492147f/ThermalBridgesENISO10211/mesh_0.h5 +I0114 16:48:22.877389 706813 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 16:48:22.899113 706813 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 16:48:22.899129 706813 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 16:48:22.900637 706813 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 64670 on processor 0 +I0114 16:48:23.061324 706813 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 12163 +I0114 16:48:23.061364 706813 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 16:48:23.472735 706813 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 16:48:23.825726 706813 element_impl.hpp:199] creating element u : u +I0114 16:48:24.030184 706813 element_impl.hpp:199] creating element uV : u +I0114 16:48:24.030226 706813 element_impl.hpp:199] creating element uV : u +I0114 16:48:24.030241 706813 element_impl.hpp:199] creating element uV : u +I0114 16:48:24.035993 706813 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 16:48:24.051887 706813 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 16:48:24.051908 706813 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 16:48:24.053689 706813 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 64670 on processor 0 +I0114 16:48:24.640615 706813 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 92523 +I0114 16:48:24.640677 706813 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 16:48:25.581677 706813 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 16:48:28.661875 706813 exporterensightgold_impl.hpp:1250] writing part 1 +I0114 16:48:29.309293 706813 exporterensightgold_impl.hpp:1250] writing part 2 +I0114 16:48:29.625094 706813 exporterensightgold_impl.hpp:1250] writing part 3 +I0114 16:48:29.659224 706813 exporterensightgold_impl.hpp:1250] writing part 4 +I0114 16:48:29.697453 706813 exporterensightgold_impl.hpp:1250] writing part 5 +I0114 16:48:29.710836 706813 exporterensightgold_impl.hpp:1250] writing part 6 +I0114 16:48:29.718472 706813 exporterensightgold_impl.hpp:1376] ExporterEnsightGold::writeVariableFiles Nodal: 2 +I0114 16:48:29.718480 706813 exporterensightgold_impl.hpp:1377] ExporterEnsightGold::writeVariableFiles Element: 0 +I0114 16:48:33.261475 706813 environment.cpp:2423] Environment::clearSomeMemory before: PETSC get current memory usage (resident memory): 912261 KBytes 912.261 MBytes 0.912261 GBytes +I0114 16:48:33.261499 706813 environment.cpp:2428] Environment::clearSomeMemory before: PETSC get current PETSC Malloc usage: 0 KBytes 0 MBytes 0 GBytes +I0114 16:48:33.261508 706813 environment.cpp:2430] Environment::clearSomeMemory before: PETSC get maximum PETSC Malloc usage(largest memory ever used so far): 0 KBytes 0 MBytes 0 GBytes +I0114 16:48:33.263497 706813 environment.cpp:2423] Environment::clearSomeMemory after: PETSC get current memory usage (resident memory): 912261 KBytes 912.261 MBytes 0.912261 GBytes +I0114 16:48:33.263509 706813 environment.cpp:2428] Environment::clearSomeMemory after: PETSC get current PETSC Malloc usage: 0 KBytes 0 MBytes 0 GBytes +I0114 16:48:33.263515 706813 environment.cpp:2430] Environment::clearSomeMemory after: PETSC get maximum PETSC Malloc usage(largest memory ever used so far): 0 KBytes 0 MBytes 0 GBytes + +---- +== feelpp_app_io.WARNING + +[source,bash] +---- +Log file created at: 2026/01/14 16:48:10 +Running on machine: gaya6 +Log line format: [IWEF]mmdd hh:mm:ss.uuuuuu threadid file:line] msg +W0114 16:48:10.731263 706813 doftable.hpp:2587] TODO: finish implementation of this case below +W0114 16:48:14.995033 706813 doftable.hpp:2587] TODO: finish implementation of this case below +W0114 16:48:23.472735 706813 doftable.hpp:2587] TODO: finish implementation of this case below +W0114 16:48:25.581677 706813 doftable.hpp:2587] TODO: finish implementation of this case below + +---- + diff --git a/tmp/results/feelpp_app_io/ThermalBridgesENISO10211/gaya/2026_01_14T16_47_36/logs/654b58ad.adoc b/tmp/results/feelpp_app_io/ThermalBridgesENISO10211/gaya/2026_01_14T16_47_36/logs/654b58ad.adoc new file mode 100644 index 0000000..9669890 --- /dev/null +++ b/tmp/results/feelpp_app_io/ThermalBridgesENISO10211/gaya/2026_01_14T16_47_36/logs/654b58ad.adoc @@ -0,0 +1,238 @@ += ReFrame logs + +== ReFrame scheduler script + +[source,bash] +---- +#!/bin/bash +#SBATCH --job-name="rfm_RegressionTest_654b58ad" +#SBATCH --ntasks=32 +#SBATCH --ntasks-per-node=32 +#SBATCH --cpus-per-task=1 +#SBATCH --output=rfm_job.out +#SBATCH --error=rfm_job.err +#SBATCH --exclusive +#SBATCH --partition=public +#SBATCH --threads-per-core=1 +#SBATCH --time=0-00:15:00 +source /etc/profile.d/modules.sh +export PATH=/opt/apptainer/latest/bin/:$PATH +srun --cpus-per-task=1 apptainer exec -B"/data/home/cladellash/actions-runner/_work/apps-feelpp/apps-feelpp/reframe/stage/gaya/public/default/RegressionTest_654b58ad:/rfm_workdir" --home /data/scratch/cladellash/feelppdb --bind /data/scratch/cladellash/feelppdb/input_data/:/input_data --env OMP_NUM_THREADS=1 --sharens --bind /opt/:/opt/ --bind /data/:/data/ /data/scratch/cladellash/images//apps-feelpp.sif feelpp_app_io --directory /data/scratch/cladellash/feelppdb/app-feelpp-io/io/654b58ad/ThermalBridgesENISO10211 --discretization P1 --repository.append.np 0 --gmsh.filename /input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M2/case3_p32.json --nrun 1 + +---- + +== ReFrame error log + +[source,bash] +---- +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + + +---- + +== ReFrame output log + +[source,bash] +---- +[ Starting Feel++ ] application O version 0.111.0-preview.120 date 2026-Jan-14 +[feelpp] create Feel++ root repository: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/654b58ad/ThermalBridgesENISO10211 + +[feelpp] create Feel++ geo repository: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/654b58ad/ThermalBridgesENISO10211/geo + +[feelpp] create Feel++ expressions directory: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/654b58ad/ThermalBridgesENISO10211/exprs + +[feelpp] create Feel++ logs directory: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/654b58ad/ThermalBridgesENISO10211/logs + + . O files are stored in /data/scratch/cladellash/feelppdb/app-feelpp-io/io/654b58ad/ThermalBridgesENISO10211/ + .. logfiles :/data/scratch/cladellash/feelppdb/app-feelpp-io/io/654b58ad/ThermalBridgesENISO10211/logs +[loadMesh] Loading mesh in format json+h5: "/input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M2/case3_p32.json" +[loadMesh] Time : 6.98147s + [create function space] Time : 4.94365s + [create vectorial function space] Time : 10.1562s + [save field] Time : 0.111626s + [save vector field] Time : 0.219382s + [save mesh] Time : 1.67404s + [export time] Time : 8.01756s +Time load mesh 6.98147 +Time load create function space 4.94365 +Time load create vectorial function space 10.1562 +Time save mesh 1.67404 +Time save field 0.111626 +Time save vector field 0.219382 +Time to export 8.01756 ++----------------------------------------------------------------------------------------------------------------------------------------------------+ +| O | ++----------------------------------------------------------------------------------------------------------------------------------------------------+ +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | +| | logs | /data/scratch/cladellash/feelppdb/app-feelpp-io/io/654b58ad/ThermalBridgesENISO10211/logs | | +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | +| | journal | /data/scratch/cladellash/feelppdb/app-feelpp-io/io/654b58ad/ThermalBridgesENISO10211/journal.json | | +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | +| | directories | +------------------------------------------------------------------------------------------------------------------------------+ | | +| | | | /data/scratch/cladellash/feelppdb/app-feelpp-io/io/654b58ad/ThermalBridgesENISO10211/ | | | +| | | +------------------------------------------------------------------------------------------------------------------------------+ | | +| | | | /data/home/cladellash/actions-runner/_work/apps-feelpp/apps-feelpp/reframe/stage/gaya/public/default/RegressionTest_654b58ad | | | +| | | +------------------------------------------------------------------------------------------------------------------------------+ | | +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | ++----------------------------------------------------------------------------------------------------------------------------------------------------+ + +[ Stopping Feel++ ] application O execution time 40.5397s + +---- + +== feelpp_app_io.INFO + +[source,bash] +---- +Log file created at: 2026/01/14 16:52:44 +Running on machine: gaya5 +Log line format: [IWEF]mmdd hh:mm:ss.uuuuuu threadid file:line] msg +I0114 16:52:44.124779 713682 environment.cpp:1708] File /input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M2/case3_p32.json found +I0114 16:52:44.127825 713682 loadmesh.hpp:246] Loading mesh in json+h5 format "/input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M2/case3_p32.json" +I0114 16:52:44.233929 713682 partitionio.hpp:1134] read stat points 1622593,51266,0 +I0114 16:52:44.233940 713682 partitionio.hpp:1137] read stat elements 9021100,287556,0 +I0114 16:52:44.233942 713682 partitionio.hpp:1140] read stat ghost_elements 831907,31275,0 +I0114 16:52:44.233944 713682 partitionio.hpp:1143] read stat marked_faces 400406,9465,0 +I0114 16:52:44.233947 713682 partitionio.hpp:1146] read stat marked_edges 0,0,0 +I0114 16:52:44.233948 713682 partitionio.hpp:1149] read stat marked_points 0,0,0 +I0114 16:52:44.235214 713682 partitionio.hpp:1168] loaded points_ids:1x1622593 +I0114 16:52:44.236449 713682 partitionio.hpp:1170] loaded points_coords:1x4867779 +I0114 16:52:44.465783 713682 partitionio.hpp:1267] loaded elements:1x45105500 +I0114 16:52:45.570026 713682 partitionio.hpp:1373] loaded ghost_elements:1x831907 +I0114 16:52:45.587757 713682 partitionio.hpp:1569] loaded marked_subentities:1x1601624 +I0114 16:52:45.795786 713682 meshimpl.hpp:1051] We have 9465 faces in the database +I0114 16:52:46.718027 713682 meshimpl.hpp:1325] We have now 585436 faces in the mesh +I0114 16:52:49.988837 713682 meshimpl.hpp:1863] update boundary points... +I0114 16:52:50.030920 713682 meshimpl.hpp:1883] update boundary elements... +I0114 16:52:51.075271 713682 meshimpl.hpp:524] h average : 0.01632 +I0114 16:52:51.075304 713682 meshimpl.hpp:525] h min : 0.0098099 +I0114 16:52:51.075307 713682 meshimpl.hpp:526] h max : 0.0226452 +I0114 16:52:51.090389 713682 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 16:52:51.156328 713682 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 16:52:51.156340 713682 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 16:52:51.159555 713682 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 256281 on processor 0 +I0114 16:52:52.752386 713682 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 45476 +I0114 16:52:52.752451 713682 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 16:52:53.842520 713682 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 16:52:56.037761 713682 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 16:52:56.065092 713682 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 16:52:56.065102 713682 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 16:52:56.068460 713682 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 256281 on processor 0 +I0114 16:52:58.899251 713682 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 136428 +I0114 16:52:58.899389 713682 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 16:53:00.731702 713682 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 16:53:06.194051 713682 element_impl.hpp:199] creating element u : u +I0114 16:53:06.612083 713682 element_impl.hpp:199] creating element {x+y+z,x+y+z,x+y+z}:x:y:z : u +I0114 16:53:06.612167 713682 exporterimpl.hpp:219] [Exporter] format : ensightgold +I0114 16:53:06.612172 713682 exporterimpl.hpp:220] [Exporter] N : 1 +I0114 16:53:07.003238 713682 partitionio.hpp:319] writing mesh in HDF5 format in /data/scratch/cladellash/feelppdb/app-feelpp-io/io/654b58ad/ThermalBridgesENISO10211/mesh_0.h5 +I0114 16:53:08.626852 713682 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 16:53:08.664412 713682 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 16:53:08.664422 713682 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 16:53:08.668454 713682 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 256281 on processor 0 +I0114 16:53:10.165624 713682 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 45476 +I0114 16:53:10.165692 713682 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 16:53:10.993270 713682 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 16:53:13.130169 713682 element_impl.hpp:199] creating element u : u +I0114 16:53:13.691038 713682 element_impl.hpp:199] creating element uV : u +I0114 16:53:13.691080 713682 element_impl.hpp:199] creating element uV : u +I0114 16:53:13.691107 713682 element_impl.hpp:199] creating element uV : u +I0114 16:53:13.704106 713682 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 16:53:13.728531 713682 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 16:53:13.728540 713682 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 16:53:13.732686 713682 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 256281 on processor 0 +I0114 16:53:15.159540 713682 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 45476 +I0114 16:53:15.160004 713682 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 16:53:16.078320 713682 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 16:53:20.176409 713682 exporterensightgold_impl.hpp:1250] writing part 1 +I0114 16:53:20.549991 713682 exporterensightgold_impl.hpp:1250] writing part 2 +I0114 16:53:20.613113 713682 exporterensightgold_impl.hpp:1250] writing part 3 +I0114 16:53:20.873623 713682 exporterensightgold_impl.hpp:1250] writing part 4 +I0114 16:53:20.876250 713682 exporterensightgold_impl.hpp:1250] writing part 5 +I0114 16:53:20.950749 713682 exporterensightgold_impl.hpp:1250] writing part 6 +I0114 16:53:20.996768 713682 exporterensightgold_impl.hpp:1376] ExporterEnsightGold::writeVariableFiles Nodal: 2 +I0114 16:53:20.996775 713682 exporterensightgold_impl.hpp:1377] ExporterEnsightGold::writeVariableFiles Element: 0 +I0114 16:53:24.280916 713682 environment.cpp:2423] Environment::clearSomeMemory before: PETSC get current memory usage (resident memory): 1.80565e+06 KBytes 1805.65 MBytes 1.80565 GBytes +I0114 16:53:24.280939 713682 environment.cpp:2428] Environment::clearSomeMemory before: PETSC get current PETSC Malloc usage: 0 KBytes 0 MBytes 0 GBytes +I0114 16:53:24.280948 713682 environment.cpp:2430] Environment::clearSomeMemory before: PETSC get maximum PETSC Malloc usage(largest memory ever used so far): 0 KBytes 0 MBytes 0 GBytes +I0114 16:53:24.280977 713682 environment.cpp:2423] Environment::clearSomeMemory after: PETSC get current memory usage (resident memory): 1.80565e+06 KBytes 1805.65 MBytes 1.80565 GBytes +I0114 16:53:24.280980 713682 environment.cpp:2428] Environment::clearSomeMemory after: PETSC get current PETSC Malloc usage: 0 KBytes 0 MBytes 0 GBytes +I0114 16:53:24.280982 713682 environment.cpp:2430] Environment::clearSomeMemory after: PETSC get maximum PETSC Malloc usage(largest memory ever used so far): 0 KBytes 0 MBytes 0 GBytes + +---- +== feelpp_app_io.WARNING + +[source,bash] +---- +Log file created at: 2026/01/14 16:52:53 +Running on machine: gaya5 +Log line format: [IWEF]mmdd hh:mm:ss.uuuuuu threadid file:line] msg +W0114 16:52:53.842520 713682 doftable.hpp:2587] TODO: finish implementation of this case below +W0114 16:53:00.731702 713682 doftable.hpp:2587] TODO: finish implementation of this case below +W0114 16:53:10.993270 713682 doftable.hpp:2587] TODO: finish implementation of this case below +W0114 16:53:16.078320 713682 doftable.hpp:2587] TODO: finish implementation of this case below + +---- + diff --git a/tmp/results/feelpp_app_io/ThermalBridgesENISO10211/gaya/2026_01_14T16_47_36/logs/7d93c5d1.adoc b/tmp/results/feelpp_app_io/ThermalBridgesENISO10211/gaya/2026_01_14T16_47_36/logs/7d93c5d1.adoc new file mode 100644 index 0000000..4f8d996 --- /dev/null +++ b/tmp/results/feelpp_app_io/ThermalBridgesENISO10211/gaya/2026_01_14T16_47_36/logs/7d93c5d1.adoc @@ -0,0 +1,430 @@ += ReFrame logs + +== ReFrame scheduler script + +[source,bash] +---- +#!/bin/bash +#SBATCH --job-name="rfm_RegressionTest_7d93c5d1" +#SBATCH --ntasks=128 +#SBATCH --ntasks-per-node=128 +#SBATCH --cpus-per-task=1 +#SBATCH --output=rfm_job.out +#SBATCH --error=rfm_job.err +#SBATCH --exclusive +#SBATCH --partition=public +#SBATCH --threads-per-core=1 +#SBATCH --time=0-00:15:00 +source /etc/profile.d/modules.sh +export PATH=/opt/apptainer/latest/bin/:$PATH +srun --cpus-per-task=1 apptainer exec -B"/data/home/cladellash/actions-runner/_work/apps-feelpp/apps-feelpp/reframe/stage/gaya/public/default/RegressionTest_7d93c5d1:/rfm_workdir" --home /data/scratch/cladellash/feelppdb --bind /data/scratch/cladellash/feelppdb/input_data/:/input_data --env OMP_NUM_THREADS=1 --sharens --bind /opt/:/opt/ --bind /data/:/data/ /data/scratch/cladellash/images//apps-feelpp.sif feelpp_app_io --directory /data/scratch/cladellash/feelppdb/app-feelpp-io/io/7d93c5d1/ThermalBridgesENISO10211 --discretization P1 --repository.append.np 0 --gmsh.filename /input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M3/case3_p128.json --nrun 1 + +---- + +== ReFrame error log + +[source,bash] +---- +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + + +---- + +== ReFrame output log + +[source,bash] +---- +[ Starting Feel++ ] application O version 0.111.0-preview.120 date 2026-Jan-14 +[feelpp] create Feel++ root repository: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/7d93c5d1/ThermalBridgesENISO10211 + +[feelpp] create Feel++ geo repository: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/7d93c5d1/ThermalBridgesENISO10211/geo + +[feelpp] create Feel++ expressions directory: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/7d93c5d1/ThermalBridgesENISO10211/exprs + +[feelpp] create Feel++ logs directory: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/7d93c5d1/ThermalBridgesENISO10211/logs + + . O files are stored in /data/scratch/cladellash/feelppdb/app-feelpp-io/io/7d93c5d1/ThermalBridgesENISO10211/ + .. logfiles :/data/scratch/cladellash/feelppdb/app-feelpp-io/io/7d93c5d1/ThermalBridgesENISO10211/logs +[loadMesh] Loading mesh in format json+h5: "/input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M3/case3_p128.json" +[loadMesh] Time : 24.1421s + [create function space] Time : 13.4079s + [create vectorial function space] Time : 26.4918s + [save field] Time : 0.68499s + [save vector field] Time : 1.29175s + [save mesh] Time : 11.7832s + [export time] Time : 26.4553s +Time load mesh 24.1421 +Time load create function space 13.4079 +Time load create vectorial function space 26.4918 +Time save mesh 11.7832 +Time save field 0.68499 +Time save vector field 1.29175 +Time to export 26.4553 ++----------------------------------------------------------------------------------------------------------------------------------------------------+ +| O | ++----------------------------------------------------------------------------------------------------------------------------------------------------+ +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | +| | logs | /data/scratch/cladellash/feelppdb/app-feelpp-io/io/7d93c5d1/ThermalBridgesENISO10211/logs | | +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | +| | journal | /data/scratch/cladellash/feelppdb/app-feelpp-io/io/7d93c5d1/ThermalBridgesENISO10211/journal.json | | +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | +| | directories | +------------------------------------------------------------------------------------------------------------------------------+ | | +| | | | /data/scratch/cladellash/feelppdb/app-feelpp-io/io/7d93c5d1/ThermalBridgesENISO10211/ | | | +| | | +------------------------------------------------------------------------------------------------------------------------------+ | | +| | | | /data/home/cladellash/actions-runner/_work/apps-feelpp/apps-feelpp/reframe/stage/gaya/public/default/RegressionTest_7d93c5d1 | | | +| | | +------------------------------------------------------------------------------------------------------------------------------+ | | +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | ++----------------------------------------------------------------------------------------------------------------------------------------------------+ + +[ Stopping Feel++ ] application O execution time 130.051s + +---- + +== feelpp_app_io.INFO + +[source,bash] +---- +Log file created at: 2026/01/14 16:48:32 +Running on machine: gaya5 +Log line format: [IWEF]mmdd hh:mm:ss.uuuuuu threadid file:line] msg +I0114 16:48:32.614970 709014 environment.cpp:1708] File /input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M3/case3_p128.json found +I0114 16:48:32.616964 709014 loadmesh.hpp:246] Loading mesh in json+h5 format "/input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M3/case3_p128.json" +I0114 16:48:32.820394 709014 partitionio.hpp:1134] read stat points 12442028,96083,0 +I0114 16:48:32.820403 709014 partitionio.hpp:1137] read stat elements 71170451,549476,0 +I0114 16:48:32.820406 709014 partitionio.hpp:1140] read stat ghost_elements 7183252,49478,0 +I0114 16:48:32.820408 709014 partitionio.hpp:1143] read stat marked_faces 1595113,14654,0 +I0114 16:48:32.820410 709014 partitionio.hpp:1146] read stat marked_edges 0,0,0 +I0114 16:48:32.820411 709014 partitionio.hpp:1149] read stat marked_points 0,0,0 +I0114 16:48:32.823058 709014 partitionio.hpp:1168] loaded points_ids:1x12442028 +I0114 16:48:32.826049 709014 partitionio.hpp:1170] loaded points_coords:1x37326084 +I0114 16:48:34.268921 709014 partitionio.hpp:1267] loaded elements:1x355852255 +I0114 16:48:40.988524 709014 partitionio.hpp:1373] loaded ghost_elements:1x7183252 +I0114 16:48:41.694829 709014 partitionio.hpp:1569] loaded marked_subentities:1x6380452 +I0114 16:48:42.323441 709014 meshimpl.hpp:1051] We have 14654 faces in the database +I0114 16:48:44.859383 709014 meshimpl.hpp:1325] We have now 1115059 faces in the mesh +I0114 16:48:53.421840 709014 meshimpl.hpp:1863] update boundary points... +I0114 16:48:53.531314 709014 meshimpl.hpp:1883] update boundary elements... +I0114 16:48:56.694128 709014 meshimpl.hpp:524] h average : 0.00818335 +I0114 16:48:56.694169 709014 meshimpl.hpp:525] h min : 0.00477946 +I0114 16:48:56.694172 709014 meshimpl.hpp:526] h max : 0.0116148 +I0114 16:48:56.754442 709014 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 16:48:56.981508 709014 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 16:48:56.981523 709014 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 16:48:56.989007 709014 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 499998 on processor 0 +I0114 16:49:01.030627 709014 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 87082 +I0114 16:49:01.030715 709014 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 16:49:04.103193 709014 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 16:49:10.169487 709014 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 16:49:10.234297 709014 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 16:49:10.234323 709014 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 16:49:10.242960 709014 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 499998 on processor 0 +I0114 16:49:16.983302 709014 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 261246 +I0114 16:49:16.983387 709014 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 16:49:22.446480 709014 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 16:49:36.661405 709014 element_impl.hpp:199] creating element u : u +I0114 16:49:39.242668 709014 element_impl.hpp:199] creating element {x+y+z,x+y+z,x+y+z}:x:y:z : u +I0114 16:49:39.242797 709014 exporterimpl.hpp:219] [Exporter] format : ensightgold +I0114 16:49:39.242801 709014 exporterimpl.hpp:220] [Exporter] N : 1 +I0114 16:49:41.476289 709014 partitionio.hpp:319] writing mesh in HDF5 format in /data/scratch/cladellash/feelppdb/app-feelpp-io/io/7d93c5d1/ThermalBridgesENISO10211/mesh_0.h5 +I0114 16:49:53.123481 709014 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 16:49:53.244231 709014 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 16:49:53.244246 709014 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 16:49:53.263274 709014 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 499998 on processor 0 +I0114 16:49:56.664189 709014 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 87082 +I0114 16:49:56.664242 709014 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 16:49:59.276671 709014 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 16:50:04.748445 709014 element_impl.hpp:199] creating element u : u +I0114 16:50:06.743428 709014 element_impl.hpp:199] creating element uV : u +I0114 16:50:06.743914 709014 element_impl.hpp:199] creating element uV : u +I0114 16:50:06.743957 709014 element_impl.hpp:199] creating element uV : u +I0114 16:50:06.759024 709014 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 16:50:06.834903 709014 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 16:50:06.834952 709014 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 16:50:06.860847 709014 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 499998 on processor 0 +I0114 16:50:10.322887 709014 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 87082 +I0114 16:50:10.322953 709014 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 16:50:12.934428 709014 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 16:50:24.701732 709014 exporterensightgold_impl.hpp:1250] writing part 1 +I0114 16:50:26.738436 709014 exporterensightgold_impl.hpp:1250] writing part 2 +I0114 16:50:28.783905 709014 exporterensightgold_impl.hpp:1250] writing part 3 +I0114 16:50:29.548997 709014 exporterensightgold_impl.hpp:1250] writing part 4 +I0114 16:50:29.874071 709014 exporterensightgold_impl.hpp:1250] writing part 5 +I0114 16:50:30.106264 709014 exporterensightgold_impl.hpp:1250] writing part 6 +I0114 16:50:30.245002 709014 exporterensightgold_impl.hpp:1376] ExporterEnsightGold::writeVariableFiles Nodal: 2 +I0114 16:50:30.245011 709014 exporterensightgold_impl.hpp:1377] ExporterEnsightGold::writeVariableFiles Element: 0 +I0114 16:50:41.088197 709014 environment.cpp:2423] Environment::clearSomeMemory before: PETSC get current memory usage (resident memory): 3.32608e+06 KBytes 3326.08 MBytes 3.32608 GBytes +I0114 16:50:41.088251 709014 environment.cpp:2428] Environment::clearSomeMemory before: PETSC get current PETSC Malloc usage: 0 KBytes 0 MBytes 0 GBytes +I0114 16:50:41.088263 709014 environment.cpp:2430] Environment::clearSomeMemory before: PETSC get maximum PETSC Malloc usage(largest memory ever used so far): 0 KBytes 0 MBytes 0 GBytes +I0114 16:50:41.088303 709014 environment.cpp:2423] Environment::clearSomeMemory after: PETSC get current memory usage (resident memory): 3.32608e+06 KBytes 3326.08 MBytes 3.32608 GBytes +I0114 16:50:41.088307 709014 environment.cpp:2428] Environment::clearSomeMemory after: PETSC get current PETSC Malloc usage: 0 KBytes 0 MBytes 0 GBytes +I0114 16:50:41.088310 709014 environment.cpp:2430] Environment::clearSomeMemory after: PETSC get maximum PETSC Malloc usage(largest memory ever used so far): 0 KBytes 0 MBytes 0 GBytes + +---- +== feelpp_app_io.WARNING + +[source,bash] +---- +Log file created at: 2026/01/14 16:49:04 +Running on machine: gaya5 +Log line format: [IWEF]mmdd hh:mm:ss.uuuuuu threadid file:line] msg +W0114 16:49:04.103193 709014 doftable.hpp:2587] TODO: finish implementation of this case below +W0114 16:49:22.446480 709014 doftable.hpp:2587] TODO: finish implementation of this case below +W0114 16:49:59.276671 709014 doftable.hpp:2587] TODO: finish implementation of this case below +W0114 16:50:12.934428 709014 doftable.hpp:2587] TODO: finish implementation of this case below + +---- + diff --git a/tmp/results/feelpp_app_io/ThermalBridgesENISO10211/gaya/2026_01_14T16_47_36/logs/83e6566b.adoc b/tmp/results/feelpp_app_io/ThermalBridgesENISO10211/gaya/2026_01_14T16_47_36/logs/83e6566b.adoc new file mode 100644 index 0000000..f0acd20 --- /dev/null +++ b/tmp/results/feelpp_app_io/ThermalBridgesENISO10211/gaya/2026_01_14T16_47_36/logs/83e6566b.adoc @@ -0,0 +1,182 @@ += ReFrame logs + +== ReFrame scheduler script + +[source,bash] +---- +#!/bin/bash +#SBATCH --job-name="rfm_RegressionTest_83e6566b" +#SBATCH --ntasks=4 +#SBATCH --ntasks-per-node=4 +#SBATCH --cpus-per-task=1 +#SBATCH --output=rfm_job.out +#SBATCH --error=rfm_job.err +#SBATCH --exclusive +#SBATCH --partition=public +#SBATCH --threads-per-core=1 +#SBATCH --time=0-00:15:00 +source /etc/profile.d/modules.sh +export PATH=/opt/apptainer/latest/bin/:$PATH +srun --cpus-per-task=1 apptainer exec -B"/data/home/cladellash/actions-runner/_work/apps-feelpp/apps-feelpp/reframe/stage/gaya/public/default/RegressionTest_83e6566b:/rfm_workdir" --home /data/scratch/cladellash/feelppdb --bind /data/scratch/cladellash/feelppdb/input_data/:/input_data --env OMP_NUM_THREADS=1 --sharens --bind /opt/:/opt/ --bind /data/:/data/ /data/scratch/cladellash/images//apps-feelpp.sif feelpp_app_io --directory /data/scratch/cladellash/feelppdb/app-feelpp-io/io/83e6566b/ThermalBridgesENISO10211 --discretization P1 --repository.append.np 0 --gmsh.filename /input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M2/case3_p4.json --nrun 1 + +---- + +== ReFrame error log + +[source,bash] +---- +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + + +---- + +== ReFrame output log + +[source,bash] +---- +[ Starting Feel++ ] application O version 0.111.0-preview.120 date 2026-Jan-14 +[feelpp] create Feel++ root repository: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/83e6566b/ThermalBridgesENISO10211 + +[feelpp] create Feel++ geo repository: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/83e6566b/ThermalBridgesENISO10211/geo + +[feelpp] create Feel++ expressions directory: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/83e6566b/ThermalBridgesENISO10211/exprs + +[feelpp] create Feel++ logs directory: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/83e6566b/ThermalBridgesENISO10211/logs + + . O files are stored in /data/scratch/cladellash/feelppdb/app-feelpp-io/io/83e6566b/ThermalBridgesENISO10211/ + .. logfiles :/data/scratch/cladellash/feelppdb/app-feelpp-io/io/83e6566b/ThermalBridgesENISO10211/logs +[loadMesh] Loading mesh in format json+h5: "/input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M2/case3_p4.json" +[loadMesh] Time : 35.1688s + [create function space] Time : 40.6122s + [create vectorial function space] Time : 72.1719s + [save field] Time : 0.0517711s + [save vector field] Time : 0.119656s + [save mesh] Time : 1.76334s + [export time] Time : 49.0482s +Time load mesh 35.1688 +Time load create function space 40.6122 +Time load create vectorial function space 72.1719 +Time save mesh 1.76334 +Time save field 0.0517711 +Time save vector field 0.119656 +Time to export 49.0482 ++----------------------------------------------------------------------------------------------------------------------------------------------------+ +| O | ++----------------------------------------------------------------------------------------------------------------------------------------------------+ +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | +| | logs | /data/scratch/cladellash/feelppdb/app-feelpp-io/io/83e6566b/ThermalBridgesENISO10211/logs | | +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | +| | journal | /data/scratch/cladellash/feelppdb/app-feelpp-io/io/83e6566b/ThermalBridgesENISO10211/journal.json | | +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | +| | directories | +------------------------------------------------------------------------------------------------------------------------------+ | | +| | | | /data/scratch/cladellash/feelppdb/app-feelpp-io/io/83e6566b/ThermalBridgesENISO10211/ | | | +| | | +------------------------------------------------------------------------------------------------------------------------------+ | | +| | | | /data/home/cladellash/actions-runner/_work/apps-feelpp/apps-feelpp/reframe/stage/gaya/public/default/RegressionTest_83e6566b | | | +| | | +------------------------------------------------------------------------------------------------------------------------------+ | | +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | ++----------------------------------------------------------------------------------------------------------------------------------------------------+ + +[ Stopping Feel++ ] application O execution time 256.777s + +---- + +== feelpp_app_io.INFO + +[source,bash] +---- +Log file created at: 2026/01/14 16:59:58 +Running on machine: gaya5 +Log line format: [IWEF]mmdd hh:mm:ss.uuuuuu threadid file:line] msg +I0114 16:59:58.819057 715426 environment.cpp:1708] File /input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M2/case3_p4.json found +I0114 16:59:58.820595 715426 loadmesh.hpp:246] Loading mesh in json+h5 format "/input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M2/case3_p4.json" +I0114 16:59:58.899021 715426 partitionio.hpp:1134] read stat points 1456202,366133,0 +I0114 16:59:58.899029 715426 partitionio.hpp:1137] read stat elements 8398049,2101172,0 +I0114 16:59:58.899030 715426 partitionio.hpp:1140] read stat ghost_elements 208856,53874,0 +I0114 16:59:58.899032 715426 partitionio.hpp:1143] read stat marked_faces 374422,100120,0 +I0114 16:59:58.899034 715426 partitionio.hpp:1146] read stat marked_edges 0,0,0 +I0114 16:59:58.899034 715426 partitionio.hpp:1149] read stat marked_points 0,0,0 +I0114 16:59:58.899376 715426 partitionio.hpp:1168] loaded points_ids:1x1456202 +I0114 16:59:58.899696 715426 partitionio.hpp:1170] loaded points_coords:1x4368606 +I0114 16:59:59.187491 715426 partitionio.hpp:1267] loaded elements:1x41990245 +I0114 17:00:01.475015 715426 partitionio.hpp:1373] loaded ghost_elements:1x208856 +I0114 17:00:01.579849 715426 partitionio.hpp:1569] loaded marked_subentities:1x1497688 +I0114 17:00:02.640954 715426 meshimpl.hpp:1051] We have 100120 faces in the database +I0114 17:00:10.318275 715426 meshimpl.hpp:1325] We have now 4262898 faces in the mesh +I0114 17:00:28.068336 715426 meshimpl.hpp:1863] update boundary points... +I0114 17:00:28.299424 715426 meshimpl.hpp:1883] update boundary elements... +I0114 17:00:33.964918 715426 meshimpl.hpp:524] h average : 0.01632 +I0114 17:00:33.965282 715426 meshimpl.hpp:525] h min : 0.0098099 +I0114 17:00:33.965287 715426 meshimpl.hpp:526] h max : 0.0226452 +I0114 17:00:34.031158 715426 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 17:00:34.603492 715426 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 17:00:34.603503 715426 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 17:00:34.620741 715426 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 2047298 on processor 0 +I0114 17:00:49.366638 715426 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 356293 +I0114 17:00:49.366750 715426 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 17:00:56.339927 715426 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 17:01:14.664743 715426 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 17:01:14.836432 715426 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 17:01:14.836462 715426 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 17:01:14.871227 715426 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 2047298 on processor 0 +I0114 17:01:38.973922 715426 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 1068879 +I0114 17:01:38.974046 715426 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 17:01:47.371003 715426 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 17:02:26.837065 715426 element_impl.hpp:199] creating element u : u +I0114 17:02:30.830536 715426 element_impl.hpp:199] creating element {x+y+z,x+y+z,x+y+z}:x:y:z : u +I0114 17:02:30.830756 715426 exporterimpl.hpp:219] [Exporter] format : ensightgold +I0114 17:02:30.830760 715426 exporterimpl.hpp:220] [Exporter] N : 1 +I0114 17:02:31.383656 715426 partitionio.hpp:319] writing mesh in HDF5 format in /data/scratch/cladellash/feelppdb/app-feelpp-io/io/83e6566b/ThermalBridgesENISO10211/mesh_0.h5 +I0114 17:02:32.788192 715426 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 17:02:33.025257 715426 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 17:02:33.025267 715426 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 17:02:33.108636 715426 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 2047298 on processor 0 +I0114 17:02:45.714548 715426 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 356293 +I0114 17:02:45.714596 715426 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 17:02:49.868909 715426 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 17:03:05.608846 715426 element_impl.hpp:199] creating element u : u +I0114 17:03:09.874881 715426 element_impl.hpp:199] creating element uV : u +I0114 17:03:09.875172 715426 element_impl.hpp:199] creating element uV : u +I0114 17:03:09.875465 715426 element_impl.hpp:199] creating element uV : u +I0114 17:03:09.914486 715426 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 17:03:10.058701 715426 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 17:03:10.058720 715426 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 17:03:10.083359 715426 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 2047298 on processor 0 +I0114 17:03:22.514067 715426 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 356293 +I0114 17:03:22.514115 715426 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 17:03:27.207381 715426 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 17:03:55.743880 715426 exporterensightgold_impl.hpp:1250] writing part 1 +I0114 17:03:55.937470 715426 exporterensightgold_impl.hpp:1250] writing part 2 +I0114 17:03:56.153870 715426 exporterensightgold_impl.hpp:1250] writing part 3 +I0114 17:03:56.224395 715426 exporterensightgold_impl.hpp:1250] writing part 4 +I0114 17:03:56.255005 715426 exporterensightgold_impl.hpp:1250] writing part 5 +I0114 17:03:56.283632 715426 exporterensightgold_impl.hpp:1250] writing part 6 +I0114 17:03:56.301882 715426 exporterensightgold_impl.hpp:1376] ExporterEnsightGold::writeVariableFiles Nodal: 2 +I0114 17:03:56.301890 715426 exporterensightgold_impl.hpp:1377] ExporterEnsightGold::writeVariableFiles Element: 0 +I0114 17:04:15.317039 715426 environment.cpp:2423] Environment::clearSomeMemory before: PETSC get current memory usage (resident memory): 1.2262e+07 KBytes 12262 MBytes 12.262 GBytes +I0114 17:04:15.317060 715426 environment.cpp:2428] Environment::clearSomeMemory before: PETSC get current PETSC Malloc usage: 0 KBytes 0 MBytes 0 GBytes +I0114 17:04:15.317067 715426 environment.cpp:2430] Environment::clearSomeMemory before: PETSC get maximum PETSC Malloc usage(largest memory ever used so far): 0 KBytes 0 MBytes 0 GBytes +I0114 17:04:15.317106 715426 environment.cpp:2423] Environment::clearSomeMemory after: PETSC get current memory usage (resident memory): 1.2262e+07 KBytes 12262 MBytes 12.262 GBytes +I0114 17:04:15.317109 715426 environment.cpp:2428] Environment::clearSomeMemory after: PETSC get current PETSC Malloc usage: 0 KBytes 0 MBytes 0 GBytes +I0114 17:04:15.317111 715426 environment.cpp:2430] Environment::clearSomeMemory after: PETSC get maximum PETSC Malloc usage(largest memory ever used so far): 0 KBytes 0 MBytes 0 GBytes + +---- +== feelpp_app_io.WARNING + +[source,bash] +---- +Log file created at: 2026/01/14 17:00:56 +Running on machine: gaya5 +Log line format: [IWEF]mmdd hh:mm:ss.uuuuuu threadid file:line] msg +W0114 17:00:56.339927 715426 doftable.hpp:2587] TODO: finish implementation of this case below +W0114 17:01:47.371003 715426 doftable.hpp:2587] TODO: finish implementation of this case below +W0114 17:02:49.868909 715426 doftable.hpp:2587] TODO: finish implementation of this case below +W0114 17:03:27.207381 715426 doftable.hpp:2587] TODO: finish implementation of this case below + +---- + diff --git a/tmp/results/feelpp_app_io/ThermalBridgesENISO10211/gaya/2026_01_14T16_47_36/logs/85747538.adoc b/tmp/results/feelpp_app_io/ThermalBridgesENISO10211/gaya/2026_01_14T16_47_36/logs/85747538.adoc new file mode 100644 index 0000000..0fb08fb --- /dev/null +++ b/tmp/results/feelpp_app_io/ThermalBridgesENISO10211/gaya/2026_01_14T16_47_36/logs/85747538.adoc @@ -0,0 +1,178 @@ += ReFrame logs + +== ReFrame scheduler script + +[source,bash] +---- +#!/bin/bash +#SBATCH --job-name="rfm_RegressionTest_85747538" +#SBATCH --ntasks=2 +#SBATCH --ntasks-per-node=2 +#SBATCH --cpus-per-task=1 +#SBATCH --output=rfm_job.out +#SBATCH --error=rfm_job.err +#SBATCH --exclusive +#SBATCH --partition=public +#SBATCH --threads-per-core=1 +#SBATCH --time=0-00:15:00 +source /etc/profile.d/modules.sh +export PATH=/opt/apptainer/latest/bin/:$PATH +srun --cpus-per-task=1 apptainer exec -B"/data/home/cladellash/actions-runner/_work/apps-feelpp/apps-feelpp/reframe/stage/gaya/public/default/RegressionTest_85747538:/rfm_workdir" --home /data/scratch/cladellash/feelppdb --bind /data/scratch/cladellash/feelppdb/input_data/:/input_data --env OMP_NUM_THREADS=1 --sharens --bind /opt/:/opt/ --bind /data/:/data/ /data/scratch/cladellash/images//apps-feelpp.sif feelpp_app_io --directory /data/scratch/cladellash/feelppdb/app-feelpp-io/io/85747538/ThermalBridgesENISO10211 --discretization P2 --repository.append.np 0 --gmsh.filename /input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M2/case3_p2.json --nrun 1 + +---- + +== ReFrame error log + +[source,bash] +---- +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + + +---- + +== ReFrame output log + +[source,bash] +---- +[ Starting Feel++ ] application O version 0.111.0-preview.120 date 2026-Jan-14 +[feelpp] create Feel++ root repository: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/85747538/ThermalBridgesENISO10211 + +[feelpp] create Feel++ geo repository: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/85747538/ThermalBridgesENISO10211/geo + +[feelpp] create Feel++ expressions directory: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/85747538/ThermalBridgesENISO10211/exprs + +[feelpp] create Feel++ logs directory: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/85747538/ThermalBridgesENISO10211/logs + + . O files are stored in /data/scratch/cladellash/feelppdb/app-feelpp-io/io/85747538/ThermalBridgesENISO10211/ + .. logfiles :/data/scratch/cladellash/feelppdb/app-feelpp-io/io/85747538/ThermalBridgesENISO10211/logs +[loadMesh] Loading mesh in format json+h5: "/input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M2/case3_p2.json" +[loadMesh] Time : 66.0951s + [create function space] Time : 162.54s + [create vectorial function space] Time : 317.998s + [save field] Time : 0.29167s + [save vector field] Time : 0.817936s + [save mesh] Time : 3.00137s + [export time] Time : 199.523s +Time load mesh 66.0951 +Time load create function space 162.54 +Time load create vectorial function space 317.998 +Time save mesh 3.00137 +Time save field 0.29167 +Time save vector field 0.817936 +Time to export 199.523 ++----------------------------------------------------------------------------------------------------------------------------------------------------+ +| O | ++----------------------------------------------------------------------------------------------------------------------------------------------------+ +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | +| | logs | /data/scratch/cladellash/feelppdb/app-feelpp-io/io/85747538/ThermalBridgesENISO10211/logs | | +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | +| | journal | /data/scratch/cladellash/feelppdb/app-feelpp-io/io/85747538/ThermalBridgesENISO10211/journal.json | | +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | +| | directories | +------------------------------------------------------------------------------------------------------------------------------+ | | +| | | | /data/scratch/cladellash/feelppdb/app-feelpp-io/io/85747538/ThermalBridgesENISO10211/ | | | +| | | +------------------------------------------------------------------------------------------------------------------------------+ | | +| | | | /data/home/cladellash/actions-runner/_work/apps-feelpp/apps-feelpp/reframe/stage/gaya/public/default/RegressionTest_85747538 | | | +| | | +------------------------------------------------------------------------------------------------------------------------------+ | | +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | ++----------------------------------------------------------------------------------------------------------------------------------------------------+ + +[ Stopping Feel++ ] application O execution time 904.043s + +---- + +== feelpp_app_io.INFO + +[source,bash] +---- +Log file created at: 2026/01/14 16:51:44 +Running on machine: gaya2 +Log line format: [IWEF]mmdd hh:mm:ss.uuuuuu threadid file:line] msg +I0114 16:51:44.200129 472291 environment.cpp:1708] File /input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M2/case3_p2.json found +I0114 16:51:44.206424 472291 loadmesh.hpp:246] Loading mesh in json+h5 format "/input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M2/case3_p2.json" +I0114 16:51:44.234115 472291 partitionio.hpp:1134] read stat points 1430843,715281,0 +I0114 16:51:44.234122 472291 partitionio.hpp:1137] read stat elements 8302113,4151008,0 +I0114 16:51:44.234124 472291 partitionio.hpp:1140] read stat ghost_elements 112920,56412,0 +I0114 16:51:44.234126 472291 partitionio.hpp:1143] read stat marked_faces 374422,187057,0 +I0114 16:51:44.234127 472291 partitionio.hpp:1146] read stat marked_edges 0,0,0 +I0114 16:51:44.234129 472291 partitionio.hpp:1149] read stat marked_points 0,0,0 +I0114 16:51:44.234438 472291 partitionio.hpp:1168] loaded points_ids:1x1430843 +I0114 16:51:44.234748 472291 partitionio.hpp:1170] loaded points_coords:1x4292529 +I0114 16:51:44.479555 472291 partitionio.hpp:1267] loaded elements:1x41510565 +I0114 16:51:48.192785 472291 partitionio.hpp:1373] loaded ghost_elements:1x112920 +I0114 16:51:48.548012 472291 partitionio.hpp:1569] loaded marked_subentities:1x1497688 +I0114 16:51:50.107762 472291 meshimpl.hpp:1051] We have 187057 faces in the database +I0114 16:52:04.615236 472291 meshimpl.hpp:1325] We have now 8406503 faces in the mesh +I0114 16:52:39.060007 472291 meshimpl.hpp:1863] update boundary points... +I0114 16:52:39.523370 472291 meshimpl.hpp:1883] update boundary elements... +I0114 16:52:50.271179 472291 meshimpl.hpp:524] h average : 0.01632 +I0114 16:52:50.271243 472291 meshimpl.hpp:525] h min : 0.0098099 +I0114 16:52:50.271246 472291 meshimpl.hpp:526] h max : 0.0226452 +I0114 16:52:50.317006 472291 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 16:52:51.437341 472291 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 16:52:51.437361 472291 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 16:52:51.473011 472291 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 4094596 on processor 0 +I0114 16:54:04.226051 472291 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 5606976 +I0114 16:54:04.226639 472291 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 16:54:18.644517 472291 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 16:55:32.897734 472291 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 16:55:33.329346 472291 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 16:55:33.329367 472291 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 16:55:33.381888 472291 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 4094596 on processor 0 +I0114 16:57:34.124459 472291 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 16820928 +I0114 16:57:34.125015 472291 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 16:58:04.405999 472291 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 17:00:50.901249 472291 element_impl.hpp:199] creating element u : u +I0114 17:01:04.853456 472291 element_impl.hpp:199] creating element {x+y+z,x+y+z,x+y+z}:x:y:z : u +I0114 17:01:04.860414 472291 exporterimpl.hpp:219] [Exporter] format : ensightgold +I0114 17:01:04.860422 472291 exporterimpl.hpp:220] [Exporter] N : 1 +I0114 17:01:07.378770 472291 partitionio.hpp:319] writing mesh in HDF5 format in /data/scratch/cladellash/feelppdb/app-feelpp-io/io/85747538/ThermalBridgesENISO10211/mesh_0.h5 +I0114 17:01:09.030408 472291 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 17:01:09.867973 472291 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 17:01:09.867991 472291 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 17:01:09.900519 472291 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 4094596 on processor 0 +I0114 17:01:34.778723 472291 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 704984 +I0114 17:01:34.778884 472291 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 17:01:41.919723 472291 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 17:02:15.476820 472291 element_impl.hpp:199] creating element u : u +I0114 17:02:26.773097 472291 element_impl.hpp:199] creating element uV : u +I0114 17:02:26.773602 472291 element_impl.hpp:199] creating element uV : u +I0114 17:02:26.774132 472291 element_impl.hpp:199] creating element uV : u +I0114 17:02:26.858400 472291 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 17:02:27.205797 472291 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 17:02:27.205816 472291 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 17:02:27.258462 472291 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 4094596 on processor 0 +I0114 17:03:35.758487 472291 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 5606976 +I0114 17:03:35.758649 472291 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 17:03:50.773451 472291 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 17:05:40.351269 472291 exporterensightgold_impl.hpp:1250] writing part 1 +I0114 17:05:40.380324 472291 exporterensightgold_impl.hpp:1250] writing part 2 +I0114 17:05:40.550036 472291 exporterensightgold_impl.hpp:1250] writing part 3 +I0114 17:05:40.587515 472291 exporterensightgold_impl.hpp:1250] writing part 4 +I0114 17:05:40.734869 472291 exporterensightgold_impl.hpp:1250] writing part 5 +I0114 17:05:40.843204 472291 exporterensightgold_impl.hpp:1250] writing part 6 +I0114 17:05:40.882578 472291 exporterensightgold_impl.hpp:1376] ExporterEnsightGold::writeVariableFiles Nodal: 2 +I0114 17:05:40.882596 472291 exporterensightgold_impl.hpp:1377] ExporterEnsightGold::writeVariableFiles Element: 0 +I0114 17:06:47.964448 472291 environment.cpp:2423] Environment::clearSomeMemory before: PETSC get current memory usage (resident memory): 3.73712e+07 KBytes 37371.2 MBytes 37.3712 GBytes +I0114 17:06:47.964497 472291 environment.cpp:2428] Environment::clearSomeMemory before: PETSC get current PETSC Malloc usage: 0 KBytes 0 MBytes 0 GBytes +I0114 17:06:47.964504 472291 environment.cpp:2430] Environment::clearSomeMemory before: PETSC get maximum PETSC Malloc usage(largest memory ever used so far): 0 KBytes 0 MBytes 0 GBytes +I0114 17:06:47.964532 472291 environment.cpp:2423] Environment::clearSomeMemory after: PETSC get current memory usage (resident memory): 3.73712e+07 KBytes 37371.2 MBytes 37.3712 GBytes +I0114 17:06:47.964535 472291 environment.cpp:2428] Environment::clearSomeMemory after: PETSC get current PETSC Malloc usage: 0 KBytes 0 MBytes 0 GBytes +I0114 17:06:47.964537 472291 environment.cpp:2430] Environment::clearSomeMemory after: PETSC get maximum PETSC Malloc usage(largest memory ever used so far): 0 KBytes 0 MBytes 0 GBytes + +---- +== feelpp_app_io.WARNING + +[source,bash] +---- +Log file created at: 2026/01/14 16:54:18 +Running on machine: gaya2 +Log line format: [IWEF]mmdd hh:mm:ss.uuuuuu threadid file:line] msg +W0114 16:54:18.644517 472291 doftable.hpp:2587] TODO: finish implementation of this case below +W0114 16:58:04.405999 472291 doftable.hpp:2587] TODO: finish implementation of this case below +W0114 17:01:41.919723 472291 doftable.hpp:2587] TODO: finish implementation of this case below +W0114 17:03:50.773451 472291 doftable.hpp:2587] TODO: finish implementation of this case below + +---- + diff --git a/tmp/results/feelpp_app_io/ThermalBridgesENISO10211/gaya/2026_01_14T16_47_36/logs/9ffdc5a7.adoc b/tmp/results/feelpp_app_io/ThermalBridgesENISO10211/gaya/2026_01_14T16_47_36/logs/9ffdc5a7.adoc new file mode 100644 index 0000000..eb25e0b --- /dev/null +++ b/tmp/results/feelpp_app_io/ThermalBridgesENISO10211/gaya/2026_01_14T16_47_36/logs/9ffdc5a7.adoc @@ -0,0 +1,171 @@ += ReFrame logs + +== ReFrame scheduler script + +[source,bash] +---- +#!/bin/bash +#SBATCH --job-name="rfm_RegressionTest_9ffdc5a7" +#SBATCH --ntasks=1 +#SBATCH --ntasks-per-node=1 +#SBATCH --cpus-per-task=1 +#SBATCH --output=rfm_job.out +#SBATCH --error=rfm_job.err +#SBATCH --exclusive +#SBATCH --partition=public +#SBATCH --threads-per-core=1 +#SBATCH --time=0-00:15:00 +source /etc/profile.d/modules.sh +export PATH=/opt/apptainer/latest/bin/:$PATH +srun --cpus-per-task=1 apptainer exec -B"/data/home/cladellash/actions-runner/_work/apps-feelpp/apps-feelpp/reframe/stage/gaya/public/default/RegressionTest_9ffdc5a7:/rfm_workdir" --home /data/scratch/cladellash/feelppdb --bind /data/scratch/cladellash/feelppdb/input_data/:/input_data --env OMP_NUM_THREADS=1 --sharens --bind /opt/:/opt/ --bind /data/:/data/ /data/scratch/cladellash/images//apps-feelpp.sif feelpp_app_io --directory /data/scratch/cladellash/feelppdb/app-feelpp-io/io/9ffdc5a7/ThermalBridgesENISO10211 --discretization P2 --repository.append.np 0 --gmsh.filename /input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M1/case3_p1.json --nrun 1 + +---- + +== ReFrame error log + +[source,bash] +---- +Authorization required, but no authorization protocol specified + + +---- + +== ReFrame output log + +[source,bash] +---- +[ Starting Feel++ ] application O version 0.111.0-preview.120 date 2026-Jan-14 +[feelpp] create Feel++ root repository: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/9ffdc5a7/ThermalBridgesENISO10211 + +[feelpp] create Feel++ geo repository: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/9ffdc5a7/ThermalBridgesENISO10211/geo + +[feelpp] create Feel++ expressions directory: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/9ffdc5a7/ThermalBridgesENISO10211/exprs + +[feelpp] create Feel++ logs directory: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/9ffdc5a7/ThermalBridgesENISO10211/logs + + . O files are stored in /data/scratch/cladellash/feelppdb/app-feelpp-io/io/9ffdc5a7/ThermalBridgesENISO10211/ + .. logfiles :/data/scratch/cladellash/feelppdb/app-feelpp-io/io/9ffdc5a7/ThermalBridgesENISO10211/logs +[loadMesh] Loading mesh in format json+h5: "/input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M1/case3_p1.json" +[loadMesh] Time : 12.8246s + [create function space] Time : 17.1081s + [create vectorial function space] Time : 32.7437s + [save field] Time : 0.0545416s + [save vector field] Time : 0.143334s + [save mesh] Time : 0.430454s + [export time] Time : 21.9107s +Time load mesh 12.8246 +Time load create function space 17.1081 +Time load create vectorial function space 32.7437 +Time save mesh 0.430454 +Time save field 0.0545416 +Time save vector field 0.143334 +Time to export 21.9107 ++----------------------------------------------------------------------------------------------------------------------------------------------------+ +| O | ++----------------------------------------------------------------------------------------------------------------------------------------------------+ +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | +| | logs | /data/scratch/cladellash/feelppdb/app-feelpp-io/io/9ffdc5a7/ThermalBridgesENISO10211/logs | | +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | +| | journal | /data/scratch/cladellash/feelppdb/app-feelpp-io/io/9ffdc5a7/ThermalBridgesENISO10211/journal.json | | +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | +| | directories | +------------------------------------------------------------------------------------------------------------------------------+ | | +| | | | /data/scratch/cladellash/feelppdb/app-feelpp-io/io/9ffdc5a7/ThermalBridgesENISO10211/ | | | +| | | +------------------------------------------------------------------------------------------------------------------------------+ | | +| | | | /data/home/cladellash/actions-runner/_work/apps-feelpp/apps-feelpp/reframe/stage/gaya/public/default/RegressionTest_9ffdc5a7 | | | +| | | +------------------------------------------------------------------------------------------------------------------------------+ | | +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | ++----------------------------------------------------------------------------------------------------------------------------------------------------+ + +[ Stopping Feel++ ] application O execution time 107.331s + +---- + +== feelpp_app_io.INFO + +[source,bash] +---- +Log file created at: 2026/01/14 16:47:43 +Running on machine: gaya2 +Log line format: [IWEF]mmdd hh:mm:ss.uuuuuu threadid file:line] msg +I0114 16:47:43.761353 471595 environment.cpp:1708] File /input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M1/case3_p1.json found +I0114 16:47:43.762776 471595 loadmesh.hpp:246] Loading mesh in json+h5 format "/input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M1/case3_p1.json" +I0114 16:47:43.791347 471595 partitionio.hpp:1134] read stat points 193654,193654,0 +I0114 16:47:43.791353 471595 partitionio.hpp:1137] read stat elements 1058492,1058492,0 +I0114 16:47:43.791355 471595 partitionio.hpp:1140] read stat ghost_elements 0,0,0 +I0114 16:47:43.791356 471595 partitionio.hpp:1143] read stat marked_faces 94934,94934,0 +I0114 16:47:43.791358 471595 partitionio.hpp:1146] read stat marked_edges 0,0,0 +I0114 16:47:43.791359 471595 partitionio.hpp:1149] read stat marked_points 0,0,0 +I0114 16:47:43.791680 471595 partitionio.hpp:1168] loaded points_ids:1x193654 +I0114 16:47:43.791950 471595 partitionio.hpp:1170] loaded points_coords:1x580962 +I0114 16:47:43.840273 471595 partitionio.hpp:1267] loaded elements:1x5292460 +I0114 16:47:44.452179 471595 partitionio.hpp:1569] loaded marked_subentities:1x379736 +I0114 16:47:44.700273 471595 meshimpl.hpp:1051] We have 94934 faces in the database +I0114 16:47:48.007349 471595 meshimpl.hpp:1325] We have now 2164759 faces in the mesh +I0114 16:47:54.126758 471595 meshimpl.hpp:1863] update boundary points... +I0114 16:47:54.243077 471595 meshimpl.hpp:1883] update boundary elements... +I0114 16:47:56.562814 471595 meshimpl.hpp:524] h average : 0.0325846 +I0114 16:47:56.562879 471595 meshimpl.hpp:525] h min : 0.0175455 +I0114 16:47:56.562882 471595 meshimpl.hpp:526] h max : 0.044348 +I0114 16:47:56.585873 471595 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 16:47:56.815769 471595 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 16:47:56.815783 471595 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 16:47:56.825098 471595 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 1058492 on processor 0 +I0114 16:48:10.724892 471595 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 1493574 +W0114 16:48:13.118292 471595 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 16:48:13.708079 471595 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 16:48:13.828541 471595 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 16:48:13.828946 471595 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 16:48:13.847709 471595 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 1058492 on processor 0 +I0114 16:48:39.028191 471595 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 4480722 +W0114 16:48:45.531140 471595 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 16:48:46.455315 471595 element_impl.hpp:199] creating element u : u +I0114 16:48:47.727864 471595 element_impl.hpp:199] creating element {x+y+z,x+y+z,x+y+z}:x:y:z : u +I0114 16:48:47.729415 471595 exporterimpl.hpp:219] [Exporter] format : ensightgold +I0114 16:48:47.729420 471595 exporterimpl.hpp:220] [Exporter] N : 1 +I0114 16:48:48.077709 471595 partitionio.hpp:319] writing mesh in HDF5 format in /data/scratch/cladellash/feelppdb/app-feelpp-io/io/9ffdc5a7/ThermalBridgesENISO10211/mesh_0.h5 +I0114 16:48:48.372228 471595 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 16:48:48.547104 471595 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 16:48:48.547118 471595 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 16:48:48.566184 471595 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 1058492 on processor 0 +I0114 16:48:52.300530 471595 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 193654 +W0114 16:48:53.458245 471595 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 16:48:53.627740 471595 element_impl.hpp:199] creating element u : u +I0114 16:48:55.481384 471595 element_impl.hpp:199] creating element uV : u +I0114 16:48:55.481534 471595 element_impl.hpp:199] creating element uV : u +I0114 16:48:55.481665 471595 element_impl.hpp:199] creating element uV : u +I0114 16:48:55.500519 471595 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 16:48:55.585537 471595 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 16:48:55.585551 471595 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 16:48:55.605327 471595 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 1058492 on processor 0 +I0114 16:49:08.331796 471595 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 1493574 +W0114 16:49:10.534080 471595 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 16:49:16.650976 471595 exporterensightgold_impl.hpp:1250] writing part 1 +I0114 16:49:16.659524 471595 exporterensightgold_impl.hpp:1250] writing part 2 +I0114 16:49:16.679093 471595 exporterensightgold_impl.hpp:1250] writing part 3 +I0114 16:49:16.696252 471595 exporterensightgold_impl.hpp:1250] writing part 4 +I0114 16:49:16.713307 471595 exporterensightgold_impl.hpp:1250] writing part 5 +I0114 16:49:16.737107 471595 exporterensightgold_impl.hpp:1250] writing part 6 +I0114 16:49:16.753420 471595 exporterensightgold_impl.hpp:1376] ExporterEnsightGold::writeVariableFiles Nodal: 2 +I0114 16:49:16.753424 471595 exporterensightgold_impl.hpp:1377] ExporterEnsightGold::writeVariableFiles Element: 0 +I0114 16:49:30.814549 471595 environment.cpp:2423] Environment::clearSomeMemory before: PETSC get current memory usage (resident memory): 9.67416e+06 KBytes 9674.16 MBytes 9.67416 GBytes +I0114 16:49:30.814565 471595 environment.cpp:2428] Environment::clearSomeMemory before: PETSC get current PETSC Malloc usage: 0 KBytes 0 MBytes 0 GBytes +I0114 16:49:30.814570 471595 environment.cpp:2430] Environment::clearSomeMemory before: PETSC get maximum PETSC Malloc usage(largest memory ever used so far): 0 KBytes 0 MBytes 0 GBytes +I0114 16:49:30.814592 471595 environment.cpp:2423] Environment::clearSomeMemory after: PETSC get current memory usage (resident memory): 9.67416e+06 KBytes 9674.16 MBytes 9.67416 GBytes +I0114 16:49:30.814594 471595 environment.cpp:2428] Environment::clearSomeMemory after: PETSC get current PETSC Malloc usage: 0 KBytes 0 MBytes 0 GBytes +I0114 16:49:30.814596 471595 environment.cpp:2430] Environment::clearSomeMemory after: PETSC get maximum PETSC Malloc usage(largest memory ever used so far): 0 KBytes 0 MBytes 0 GBytes + +---- +== feelpp_app_io.WARNING + +[source,bash] +---- +Log file created at: 2026/01/14 16:48:13 +Running on machine: gaya2 +Log line format: [IWEF]mmdd hh:mm:ss.uuuuuu threadid file:line] msg +W0114 16:48:13.118292 471595 doftable.hpp:2587] TODO: finish implementation of this case below +W0114 16:48:45.531140 471595 doftable.hpp:2587] TODO: finish implementation of this case below +W0114 16:48:53.458245 471595 doftable.hpp:2587] TODO: finish implementation of this case below +W0114 16:49:10.534080 471595 doftable.hpp:2587] TODO: finish implementation of this case below + +---- + diff --git a/tmp/results/feelpp_app_io/ThermalBridgesENISO10211/gaya/2026_01_14T16_47_36/logs/a939db1a.adoc b/tmp/results/feelpp_app_io/ThermalBridgesENISO10211/gaya/2026_01_14T16_47_36/logs/a939db1a.adoc new file mode 100644 index 0000000..edab210 --- /dev/null +++ b/tmp/results/feelpp_app_io/ThermalBridgesENISO10211/gaya/2026_01_14T16_47_36/logs/a939db1a.adoc @@ -0,0 +1,178 @@ += ReFrame logs + +== ReFrame scheduler script + +[source,bash] +---- +#!/bin/bash +#SBATCH --job-name="rfm_RegressionTest_a939db1a" +#SBATCH --ntasks=2 +#SBATCH --ntasks-per-node=2 +#SBATCH --cpus-per-task=1 +#SBATCH --output=rfm_job.out +#SBATCH --error=rfm_job.err +#SBATCH --exclusive +#SBATCH --partition=public +#SBATCH --threads-per-core=1 +#SBATCH --time=0-00:15:00 +source /etc/profile.d/modules.sh +export PATH=/opt/apptainer/latest/bin/:$PATH +srun --cpus-per-task=1 apptainer exec -B"/data/home/cladellash/actions-runner/_work/apps-feelpp/apps-feelpp/reframe/stage/gaya/public/default/RegressionTest_a939db1a:/rfm_workdir" --home /data/scratch/cladellash/feelppdb --bind /data/scratch/cladellash/feelppdb/input_data/:/input_data --env OMP_NUM_THREADS=1 --sharens --bind /opt/:/opt/ --bind /data/:/data/ /data/scratch/cladellash/images//apps-feelpp.sif feelpp_app_io --directory /data/scratch/cladellash/feelppdb/app-feelpp-io/io/a939db1a/ThermalBridgesENISO10211 --discretization P2 --repository.append.np 0 --gmsh.filename /input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M1/case3_p2.json --nrun 1 + +---- + +== ReFrame error log + +[source,bash] +---- +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + + +---- + +== ReFrame output log + +[source,bash] +---- +[ Starting Feel++ ] application O version 0.111.0-preview.120 date 2026-Jan-14 +[feelpp] create Feel++ root repository: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/a939db1a/ThermalBridgesENISO10211 + +[feelpp] create Feel++ geo repository: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/a939db1a/ThermalBridgesENISO10211/geo + +[feelpp] create Feel++ expressions directory: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/a939db1a/ThermalBridgesENISO10211/exprs + +[feelpp] create Feel++ logs directory: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/a939db1a/ThermalBridgesENISO10211/logs + + . O files are stored in /data/scratch/cladellash/feelppdb/app-feelpp-io/io/a939db1a/ThermalBridgesENISO10211/ + .. logfiles :/data/scratch/cladellash/feelppdb/app-feelpp-io/io/a939db1a/ThermalBridgesENISO10211/logs +[loadMesh] Loading mesh in format json+h5: "/input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M1/case3_p2.json" +[loadMesh] Time : 6.99374s + [create function space] Time : 14.3477s + [create vectorial function space] Time : 32.6979s + [save field] Time : 0.0543385s + [save vector field] Time : 0.145669s + [save mesh] Time : 0.3601s + [export time] Time : 17.0208s +Time load mesh 6.99374 +Time load create function space 14.3477 +Time load create vectorial function space 32.6979 +Time save mesh 0.3601 +Time save field 0.0543385 +Time save vector field 0.145669 +Time to export 17.0208 ++----------------------------------------------------------------------------------------------------------------------------------------------------+ +| O | ++----------------------------------------------------------------------------------------------------------------------------------------------------+ +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | +| | logs | /data/scratch/cladellash/feelppdb/app-feelpp-io/io/a939db1a/ThermalBridgesENISO10211/logs | | +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | +| | journal | /data/scratch/cladellash/feelppdb/app-feelpp-io/io/a939db1a/ThermalBridgesENISO10211/journal.json | | +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | +| | directories | +------------------------------------------------------------------------------------------------------------------------------+ | | +| | | | /data/scratch/cladellash/feelppdb/app-feelpp-io/io/a939db1a/ThermalBridgesENISO10211/ | | | +| | | +------------------------------------------------------------------------------------------------------------------------------+ | | +| | | | /data/home/cladellash/actions-runner/_work/apps-feelpp/apps-feelpp/reframe/stage/gaya/public/default/RegressionTest_a939db1a | | | +| | | +------------------------------------------------------------------------------------------------------------------------------+ | | +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | ++----------------------------------------------------------------------------------------------------------------------------------------------------+ + +[ Stopping Feel++ ] application O execution time 85.1006s + +---- + +== feelpp_app_io.INFO + +[source,bash] +---- +Log file created at: 2026/01/14 16:50:51 +Running on machine: gaya5 +Log line format: [IWEF]mmdd hh:mm:ss.uuuuuu threadid file:line] msg +I0114 16:50:51.247078 711382 environment.cpp:1708] File /input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M1/case3_p2.json found +I0114 16:50:51.253249 711382 loadmesh.hpp:246] Loading mesh in json+h5 format "/input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M1/case3_p2.json" +I0114 16:50:51.279536 711382 partitionio.hpp:1134] read stat points 200716,100428,0 +I0114 16:50:51.279542 711382 partitionio.hpp:1137] read stat elements 1084104,542147,0 +I0114 16:50:51.279544 711382 partitionio.hpp:1140] read stat ghost_elements 25612,12901,0 +I0114 16:50:51.279546 711382 partitionio.hpp:1143] read stat marked_faces 94934,48326,0 +I0114 16:50:51.279547 711382 partitionio.hpp:1146] read stat marked_edges 0,0,0 +I0114 16:50:51.279548 711382 partitionio.hpp:1149] read stat marked_points 0,0,0 +I0114 16:50:51.279867 711382 partitionio.hpp:1168] loaded points_ids:1x200716 +I0114 16:50:51.280138 711382 partitionio.hpp:1170] loaded points_coords:1x602148 +I0114 16:50:51.312736 711382 partitionio.hpp:1267] loaded elements:1x5420520 +I0114 16:50:51.550932 711382 partitionio.hpp:1373] loaded ghost_elements:1x25612 +I0114 16:50:51.553421 711382 partitionio.hpp:1569] loaded marked_subentities:1x379736 +I0114 16:50:51.796476 711382 meshimpl.hpp:1051] We have 48326 faces in the database +I0114 16:50:53.336846 711382 meshimpl.hpp:1325] We have now 1110821 faces in the mesh +I0114 16:50:57.017446 711382 meshimpl.hpp:1863] update boundary points... +I0114 16:50:57.076007 711382 meshimpl.hpp:1883] update boundary elements... +I0114 16:50:58.216282 711382 meshimpl.hpp:524] h average : 0.0325846 +I0114 16:50:58.216354 711382 meshimpl.hpp:525] h min : 0.0175455 +I0114 16:50:58.216357 711382 meshimpl.hpp:526] h max : 0.044348 +I0114 16:50:58.232385 711382 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 16:50:58.333240 711382 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 16:50:58.333253 711382 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 16:50:58.338327 711382 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 529246 on processor 0 +I0114 16:51:04.636099 711382 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 750772 +I0114 16:51:04.636250 711382 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 16:51:06.143049 711382 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 16:51:12.587162 711382 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 16:51:12.640723 711382 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 16:51:12.640736 711382 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 16:51:12.649178 711382 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 529246 on processor 0 +I0114 16:51:24.017949 711382 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 2252316 +I0114 16:51:24.018374 711382 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 16:51:27.643955 711382 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 16:51:45.285578 711382 element_impl.hpp:199] creating element u : u +I0114 16:51:46.583451 711382 element_impl.hpp:199] creating element {x+y+z,x+y+z,x+y+z}:x:y:z : u +I0114 16:51:46.584159 711382 exporterimpl.hpp:219] [Exporter] format : ensightgold +I0114 16:51:46.584162 711382 exporterimpl.hpp:220] [Exporter] N : 1 +I0114 16:51:46.865173 711382 partitionio.hpp:319] writing mesh in HDF5 format in /data/scratch/cladellash/feelppdb/app-feelpp-io/io/a939db1a/ThermalBridgesENISO10211/mesh_0.h5 +I0114 16:51:47.154690 711382 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 16:51:47.234283 711382 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 16:51:47.234295 711382 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 16:51:47.238668 711382 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 529246 on processor 0 +I0114 16:51:48.799666 711382 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 97896 +I0114 16:51:48.799738 711382 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 16:51:49.582123 711382 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 16:51:51.277166 711382 element_impl.hpp:199] creating element u : u +I0114 16:51:52.472689 711382 element_impl.hpp:199] creating element uV : u +I0114 16:51:52.472771 711382 element_impl.hpp:199] creating element uV : u +I0114 16:51:52.472841 711382 element_impl.hpp:199] creating element uV : u +I0114 16:51:52.483887 711382 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 16:51:52.524693 711382 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 16:51:52.524704 711382 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 16:51:52.533130 711382 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 529246 on processor 0 +I0114 16:51:58.245200 711382 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 750772 +I0114 16:51:58.245620 711382 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 16:51:59.611331 711382 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 16:52:09.061585 711382 exporterensightgold_impl.hpp:1250] writing part 1 +I0114 16:52:09.077257 711382 exporterensightgold_impl.hpp:1250] writing part 2 +I0114 16:52:09.107185 711382 exporterensightgold_impl.hpp:1250] writing part 3 +I0114 16:52:09.125319 711382 exporterensightgold_impl.hpp:1250] writing part 4 +I0114 16:52:09.149369 711382 exporterensightgold_impl.hpp:1250] writing part 5 +I0114 16:52:09.165791 711382 exporterensightgold_impl.hpp:1250] writing part 6 +I0114 16:52:09.177062 711382 exporterensightgold_impl.hpp:1376] ExporterEnsightGold::writeVariableFiles Nodal: 2 +I0114 16:52:09.177065 711382 exporterensightgold_impl.hpp:1377] ExporterEnsightGold::writeVariableFiles Element: 0 +I0114 16:52:16.064375 711382 environment.cpp:2423] Environment::clearSomeMemory before: PETSC get current memory usage (resident memory): 5.04784e+06 KBytes 5047.84 MBytes 5.04784 GBytes +I0114 16:52:16.064391 711382 environment.cpp:2428] Environment::clearSomeMemory before: PETSC get current PETSC Malloc usage: 0 KBytes 0 MBytes 0 GBytes +I0114 16:52:16.064397 711382 environment.cpp:2430] Environment::clearSomeMemory before: PETSC get maximum PETSC Malloc usage(largest memory ever used so far): 0 KBytes 0 MBytes 0 GBytes +I0114 16:52:16.064420 711382 environment.cpp:2423] Environment::clearSomeMemory after: PETSC get current memory usage (resident memory): 5.04784e+06 KBytes 5047.84 MBytes 5.04784 GBytes +I0114 16:52:16.064424 711382 environment.cpp:2428] Environment::clearSomeMemory after: PETSC get current PETSC Malloc usage: 0 KBytes 0 MBytes 0 GBytes +I0114 16:52:16.064425 711382 environment.cpp:2430] Environment::clearSomeMemory after: PETSC get maximum PETSC Malloc usage(largest memory ever used so far): 0 KBytes 0 MBytes 0 GBytes + +---- +== feelpp_app_io.WARNING + +[source,bash] +---- +Log file created at: 2026/01/14 16:51:06 +Running on machine: gaya5 +Log line format: [IWEF]mmdd hh:mm:ss.uuuuuu threadid file:line] msg +W0114 16:51:06.143049 711382 doftable.hpp:2587] TODO: finish implementation of this case below +W0114 16:51:27.643955 711382 doftable.hpp:2587] TODO: finish implementation of this case below +W0114 16:51:49.582123 711382 doftable.hpp:2587] TODO: finish implementation of this case below +W0114 16:51:59.611331 711382 doftable.hpp:2587] TODO: finish implementation of this case below + +---- + diff --git a/tmp/results/feelpp_app_io/ThermalBridgesENISO10211/gaya/2026_01_14T16_47_36/logs/aaa420bc.adoc b/tmp/results/feelpp_app_io/ThermalBridgesENISO10211/gaya/2026_01_14T16_47_36/logs/aaa420bc.adoc new file mode 100644 index 0000000..1276f19 --- /dev/null +++ b/tmp/results/feelpp_app_io/ThermalBridgesENISO10211/gaya/2026_01_14T16_47_36/logs/aaa420bc.adoc @@ -0,0 +1,238 @@ += ReFrame logs + +== ReFrame scheduler script + +[source,bash] +---- +#!/bin/bash +#SBATCH --job-name="rfm_RegressionTest_aaa420bc" +#SBATCH --ntasks=32 +#SBATCH --ntasks-per-node=32 +#SBATCH --cpus-per-task=1 +#SBATCH --output=rfm_job.out +#SBATCH --error=rfm_job.err +#SBATCH --exclusive +#SBATCH --partition=public +#SBATCH --threads-per-core=1 +#SBATCH --time=0-00:15:00 +source /etc/profile.d/modules.sh +export PATH=/opt/apptainer/latest/bin/:$PATH +srun --cpus-per-task=1 apptainer exec -B"/data/home/cladellash/actions-runner/_work/apps-feelpp/apps-feelpp/reframe/stage/gaya/public/default/RegressionTest_aaa420bc:/rfm_workdir" --home /data/scratch/cladellash/feelppdb --bind /data/scratch/cladellash/feelppdb/input_data/:/input_data --env OMP_NUM_THREADS=1 --sharens --bind /opt/:/opt/ --bind /data/:/data/ /data/scratch/cladellash/images//apps-feelpp.sif feelpp_app_io --directory /data/scratch/cladellash/feelppdb/app-feelpp-io/io/aaa420bc/ThermalBridgesENISO10211 --discretization P2 --repository.append.np 0 --gmsh.filename /input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M2/case3_p32.json --nrun 1 + +---- + +== ReFrame error log + +[source,bash] +---- +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + + +---- + +== ReFrame output log + +[source,bash] +---- +[ Starting Feel++ ] application O version 0.111.0-preview.120 date 2026-Jan-14 +[feelpp] create Feel++ root repository: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/aaa420bc/ThermalBridgesENISO10211 + +[feelpp] create Feel++ geo repository: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/aaa420bc/ThermalBridgesENISO10211/geo + +[feelpp] create Feel++ expressions directory: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/aaa420bc/ThermalBridgesENISO10211/exprs + +[feelpp] create Feel++ logs directory: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/aaa420bc/ThermalBridgesENISO10211/logs + + . O files are stored in /data/scratch/cladellash/feelppdb/app-feelpp-io/io/aaa420bc/ThermalBridgesENISO10211/ + .. logfiles :/data/scratch/cladellash/feelppdb/app-feelpp-io/io/aaa420bc/ThermalBridgesENISO10211/logs +[loadMesh] Loading mesh in format json+h5: "/input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M2/case3_p32.json" +[loadMesh] Time : 6.39041s + [create function space] Time : 11.0556s + [create vectorial function space] Time : 21.683s + [save field] Time : 0.407936s + [save vector field] Time : 0.884243s + [save mesh] Time : 1.57566s + [export time] Time : 14.4552s +Time load mesh 6.39041 +Time load create function space 11.0556 +Time load create vectorial function space 21.683 +Time save mesh 1.57566 +Time save field 0.407936 +Time save vector field 0.884243 +Time to export 14.4552 ++----------------------------------------------------------------------------------------------------------------------------------------------------+ +| O | ++----------------------------------------------------------------------------------------------------------------------------------------------------+ +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | +| | logs | /data/scratch/cladellash/feelppdb/app-feelpp-io/io/aaa420bc/ThermalBridgesENISO10211/logs | | +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | +| | journal | /data/scratch/cladellash/feelppdb/app-feelpp-io/io/aaa420bc/ThermalBridgesENISO10211/journal.json | | +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | +| | directories | +------------------------------------------------------------------------------------------------------------------------------+ | | +| | | | /data/scratch/cladellash/feelppdb/app-feelpp-io/io/aaa420bc/ThermalBridgesENISO10211/ | | | +| | | +------------------------------------------------------------------------------------------------------------------------------+ | | +| | | | /data/home/cladellash/actions-runner/_work/apps-feelpp/apps-feelpp/reframe/stage/gaya/public/default/RegressionTest_aaa420bc | | | +| | | +------------------------------------------------------------------------------------------------------------------------------+ | | +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | ++----------------------------------------------------------------------------------------------------------------------------------------------------+ + +[ Stopping Feel++ ] application O execution time 67.8131s + +---- + +== feelpp_app_io.INFO + +[source,bash] +---- +Log file created at: 2026/01/14 16:52:57 +Running on machine: gaya6 +Log line format: [IWEF]mmdd hh:mm:ss.uuuuuu threadid file:line] msg +I0114 16:52:57.066032 713317 environment.cpp:1708] File /input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M2/case3_p32.json found +I0114 16:52:57.068611 713317 loadmesh.hpp:246] Loading mesh in json+h5 format "/input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M2/case3_p32.json" +I0114 16:52:57.130228 713317 partitionio.hpp:1134] read stat points 1622593,51266,0 +I0114 16:52:57.130237 713317 partitionio.hpp:1137] read stat elements 9021100,287556,0 +I0114 16:52:57.130239 713317 partitionio.hpp:1140] read stat ghost_elements 831907,31275,0 +I0114 16:52:57.130241 713317 partitionio.hpp:1143] read stat marked_faces 400406,9465,0 +I0114 16:52:57.130244 713317 partitionio.hpp:1146] read stat marked_edges 0,0,0 +I0114 16:52:57.130244 713317 partitionio.hpp:1149] read stat marked_points 0,0,0 +I0114 16:52:57.131301 713317 partitionio.hpp:1168] loaded points_ids:1x1622593 +I0114 16:52:57.132294 713317 partitionio.hpp:1170] loaded points_coords:1x4867779 +I0114 16:52:57.236732 713317 partitionio.hpp:1267] loaded elements:1x45105500 +I0114 16:52:58.044746 713317 partitionio.hpp:1373] loaded ghost_elements:1x831907 +I0114 16:52:58.100147 713317 partitionio.hpp:1569] loaded marked_subentities:1x1601624 +I0114 16:52:58.311431 713317 meshimpl.hpp:1051] We have 9465 faces in the database +I0114 16:52:59.143591 713317 meshimpl.hpp:1325] We have now 585436 faces in the mesh +I0114 16:53:02.414270 713317 meshimpl.hpp:1863] update boundary points... +I0114 16:53:02.457295 713317 meshimpl.hpp:1883] update boundary elements... +I0114 16:53:03.414616 713317 meshimpl.hpp:524] h average : 0.01632 +I0114 16:53:03.414644 713317 meshimpl.hpp:525] h min : 0.0098099 +I0114 16:53:03.414646 713317 meshimpl.hpp:526] h max : 0.0226452 +I0114 16:53:03.434356 713317 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 16:53:03.505630 713317 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 16:53:03.505643 713317 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 16:53:03.508642 713317 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 256281 on processor 0 +I0114 16:53:07.523841 713317 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 356267 +I0114 16:53:07.523990 713317 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 16:53:09.553580 713317 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 16:53:14.493901 713317 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 16:53:14.528852 713317 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 16:53:14.528864 713317 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 16:53:14.532302 713317 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 256281 on processor 0 +I0114 16:53:21.163015 713317 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 1068801 +I0114 16:53:21.163091 713317 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 16:53:25.193845 713317 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 16:53:36.177249 713317 element_impl.hpp:199] creating element u : u +I0114 16:53:37.353415 713317 element_impl.hpp:199] creating element {x+y+z,x+y+z,x+y+z}:x:y:z : u +I0114 16:53:37.353701 713317 exporterimpl.hpp:219] [Exporter] format : ensightgold +I0114 16:53:37.353704 713317 exporterimpl.hpp:220] [Exporter] N : 1 +I0114 16:53:38.685058 713317 partitionio.hpp:319] writing mesh in HDF5 format in /data/scratch/cladellash/feelppdb/app-feelpp-io/io/aaa420bc/ThermalBridgesENISO10211/mesh_0.h5 +I0114 16:53:40.238093 713317 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 16:53:40.292815 713317 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 16:53:40.292826 713317 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 16:53:40.297437 713317 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 256281 on processor 0 +I0114 16:53:41.630530 713317 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 45476 +I0114 16:53:41.630578 713317 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 16:53:42.636801 713317 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 16:53:44.668403 713317 element_impl.hpp:199] creating element u : u +I0114 16:53:45.349061 713317 element_impl.hpp:199] creating element uV : u +I0114 16:53:45.349095 713317 element_impl.hpp:199] creating element uV : u +I0114 16:53:45.349115 713317 element_impl.hpp:199] creating element uV : u +I0114 16:53:45.362219 713317 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 16:53:45.389055 713317 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 16:53:45.389065 713317 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 16:53:45.393754 713317 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 256281 on processor 0 +I0114 16:53:48.987572 713317 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 356267 +I0114 16:53:48.987636 713317 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 16:53:50.966202 713317 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 16:53:58.461095 713317 exporterensightgold_impl.hpp:1250] writing part 1 +I0114 16:53:58.483889 713317 exporterensightgold_impl.hpp:1250] writing part 2 +I0114 16:53:58.487052 713317 exporterensightgold_impl.hpp:1250] writing part 3 +I0114 16:53:58.837628 713317 exporterensightgold_impl.hpp:1250] writing part 4 +I0114 16:53:58.876451 713317 exporterensightgold_impl.hpp:1250] writing part 5 +I0114 16:53:59.042147 713317 exporterensightgold_impl.hpp:1250] writing part 6 +I0114 16:53:59.121099 713317 exporterensightgold_impl.hpp:1376] ExporterEnsightGold::writeVariableFiles Nodal: 2 +I0114 16:53:59.121106 713317 exporterensightgold_impl.hpp:1377] ExporterEnsightGold::writeVariableFiles Element: 0 +I0114 16:54:04.467402 713317 environment.cpp:2423] Environment::clearSomeMemory before: PETSC get current memory usage (resident memory): 2.77663e+06 KBytes 2776.63 MBytes 2.77663 GBytes +I0114 16:54:04.467430 713317 environment.cpp:2428] Environment::clearSomeMemory before: PETSC get current PETSC Malloc usage: 0 KBytes 0 MBytes 0 GBytes +I0114 16:54:04.467438 713317 environment.cpp:2430] Environment::clearSomeMemory before: PETSC get maximum PETSC Malloc usage(largest memory ever used so far): 0 KBytes 0 MBytes 0 GBytes +I0114 16:54:04.467615 713317 environment.cpp:2423] Environment::clearSomeMemory after: PETSC get current memory usage (resident memory): 2.77663e+06 KBytes 2776.63 MBytes 2.77663 GBytes +I0114 16:54:04.467620 713317 environment.cpp:2428] Environment::clearSomeMemory after: PETSC get current PETSC Malloc usage: 0 KBytes 0 MBytes 0 GBytes +I0114 16:54:04.467623 713317 environment.cpp:2430] Environment::clearSomeMemory after: PETSC get maximum PETSC Malloc usage(largest memory ever used so far): 0 KBytes 0 MBytes 0 GBytes + +---- +== feelpp_app_io.WARNING + +[source,bash] +---- +Log file created at: 2026/01/14 16:53:09 +Running on machine: gaya6 +Log line format: [IWEF]mmdd hh:mm:ss.uuuuuu threadid file:line] msg +W0114 16:53:09.553580 713317 doftable.hpp:2587] TODO: finish implementation of this case below +W0114 16:53:25.193845 713317 doftable.hpp:2587] TODO: finish implementation of this case below +W0114 16:53:42.636801 713317 doftable.hpp:2587] TODO: finish implementation of this case below +W0114 16:53:50.966202 713317 doftable.hpp:2587] TODO: finish implementation of this case below + +---- + diff --git a/tmp/results/feelpp_app_io/ThermalBridgesENISO10211/gaya/2026_01_14T16_47_36/logs/acc22360.adoc b/tmp/results/feelpp_app_io/ThermalBridgesENISO10211/gaya/2026_01_14T16_47_36/logs/acc22360.adoc new file mode 100644 index 0000000..09c0f2f --- /dev/null +++ b/tmp/results/feelpp_app_io/ThermalBridgesENISO10211/gaya/2026_01_14T16_47_36/logs/acc22360.adoc @@ -0,0 +1,190 @@ += ReFrame logs + +== ReFrame scheduler script + +[source,bash] +---- +#!/bin/bash +#SBATCH --job-name="rfm_RegressionTest_acc22360" +#SBATCH --ntasks=8 +#SBATCH --ntasks-per-node=8 +#SBATCH --cpus-per-task=1 +#SBATCH --output=rfm_job.out +#SBATCH --error=rfm_job.err +#SBATCH --exclusive +#SBATCH --partition=public +#SBATCH --threads-per-core=1 +#SBATCH --time=0-00:15:00 +source /etc/profile.d/modules.sh +export PATH=/opt/apptainer/latest/bin/:$PATH +srun --cpus-per-task=1 apptainer exec -B"/data/home/cladellash/actions-runner/_work/apps-feelpp/apps-feelpp/reframe/stage/gaya/public/default/RegressionTest_acc22360:/rfm_workdir" --home /data/scratch/cladellash/feelppdb --bind /data/scratch/cladellash/feelppdb/input_data/:/input_data --env OMP_NUM_THREADS=1 --sharens --bind /opt/:/opt/ --bind /data/:/data/ /data/scratch/cladellash/images//apps-feelpp.sif feelpp_app_io --directory /data/scratch/cladellash/feelppdb/app-feelpp-io/io/acc22360/ThermalBridgesENISO10211 --discretization P1 --repository.append.np 0 --gmsh.filename /input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M1/case3_p8.json --nrun 1 + +---- + +== ReFrame error log + +[source,bash] +---- +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + + +---- + +== ReFrame output log + +[source,bash] +---- +[ Starting Feel++ ] application O version 0.111.0-preview.120 date 2026-Jan-14 +[feelpp] create Feel++ root repository: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/acc22360/ThermalBridgesENISO10211 + +[feelpp] create Feel++ geo repository: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/acc22360/ThermalBridgesENISO10211/geo + +[feelpp] create Feel++ expressions directory: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/acc22360/ThermalBridgesENISO10211/exprs + +[feelpp] create Feel++ logs directory: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/acc22360/ThermalBridgesENISO10211/logs + + . O files are stored in /data/scratch/cladellash/feelppdb/app-feelpp-io/io/acc22360/ThermalBridgesENISO10211/ + .. logfiles :/data/scratch/cladellash/feelppdb/app-feelpp-io/io/acc22360/ThermalBridgesENISO10211/logs +[loadMesh] Loading mesh in format json+h5: "/input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M1/case3_p8.json" +[loadMesh] Time : 2.28738s + [create function space] Time : 1.50408s + [create vectorial function space] Time : 3.46685s + [save field] Time : 0.0255012s + [save vector field] Time : 0.0369076s + [save mesh] Time : 0.2415s + [export time] Time : 2.35228s +Time load mesh 2.28738 +Time load create function space 1.50408 +Time load create vectorial function space 3.46685 +Time save mesh 0.2415 +Time save field 0.0255012 +Time save vector field 0.0369076 +Time to export 2.35228 ++----------------------------------------------------------------------------------------------------------------------------------------------------+ +| O | ++----------------------------------------------------------------------------------------------------------------------------------------------------+ +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | +| | logs | /data/scratch/cladellash/feelppdb/app-feelpp-io/io/acc22360/ThermalBridgesENISO10211/logs | | +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | +| | journal | /data/scratch/cladellash/feelppdb/app-feelpp-io/io/acc22360/ThermalBridgesENISO10211/journal.json | | +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | +| | directories | +------------------------------------------------------------------------------------------------------------------------------+ | | +| | | | /data/scratch/cladellash/feelppdb/app-feelpp-io/io/acc22360/ThermalBridgesENISO10211/ | | | +| | | +------------------------------------------------------------------------------------------------------------------------------+ | | +| | | | /data/home/cladellash/actions-runner/_work/apps-feelpp/apps-feelpp/reframe/stage/gaya/public/default/RegressionTest_acc22360 | | | +| | | +------------------------------------------------------------------------------------------------------------------------------+ | | +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | ++----------------------------------------------------------------------------------------------------------------------------------------------------+ + +[ Stopping Feel++ ] application O execution time 12.8135s + +---- + +== feelpp_app_io.INFO + +[source,bash] +---- +Log file created at: 2026/01/14 17:06:55 +Running on machine: gaya2 +Log line format: [IWEF]mmdd hh:mm:ss.uuuuuu threadid file:line] msg +I0114 17:06:55.080544 472801 environment.cpp:1708] File /input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M1/case3_p8.json found +I0114 17:06:55.081976 472801 loadmesh.hpp:246] Loading mesh in json+h5 format "/input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M1/case3_p8.json" +I0114 17:06:55.140584 472801 partitionio.hpp:1134] read stat points 217851,26450,0 +I0114 17:06:55.140592 472801 partitionio.hpp:1137] read stat elements 1145402,140471,0 +I0114 17:06:55.140594 472801 partitionio.hpp:1140] read stat ghost_elements 86910,8159,0 +I0114 17:06:55.140595 472801 partitionio.hpp:1143] read stat marked_faces 94934,12315,0 +I0114 17:06:55.140597 472801 partitionio.hpp:1146] read stat marked_edges 0,0,0 +I0114 17:06:55.140599 472801 partitionio.hpp:1149] read stat marked_points 0,0,0 +I0114 17:06:55.141034 472801 partitionio.hpp:1168] loaded points_ids:1x217851 +I0114 17:06:55.141399 472801 partitionio.hpp:1170] loaded points_coords:1x653553 +I0114 17:06:55.194555 472801 partitionio.hpp:1267] loaded elements:1x5727010 +I0114 17:06:55.300328 472801 partitionio.hpp:1373] loaded ghost_elements:1x86910 +I0114 17:06:55.303630 472801 partitionio.hpp:1569] loaded marked_subentities:1x379736 +I0114 17:06:55.359972 472801 meshimpl.hpp:1051] We have 12315 faces in the database +I0114 17:06:55.743763 472801 meshimpl.hpp:1325] We have now 288566 faces in the mesh +I0114 17:06:56.828913 472801 meshimpl.hpp:1863] update boundary points... +I0114 17:06:56.847301 472801 meshimpl.hpp:1883] update boundary elements... +I0114 17:06:57.344108 472801 meshimpl.hpp:524] h average : 0.0325846 +I0114 17:06:57.344161 472801 meshimpl.hpp:525] h min : 0.0175455 +I0114 17:06:57.344162 472801 meshimpl.hpp:526] h max : 0.044348 +I0114 17:06:57.349538 472801 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 17:06:57.382429 472801 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 17:06:57.382437 472801 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 17:06:57.383575 472801 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 132312 on processor 0 +I0114 17:06:57.838816 472801 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 24868 +I0114 17:06:57.838868 472801 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 17:06:58.174434 472801 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 17:06:58.855571 472801 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 17:06:58.865483 472801 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 17:06:58.865494 472801 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 17:06:58.867313 472801 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 132312 on processor 0 +I0114 17:06:59.896404 472801 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 74604 +I0114 17:06:59.896485 472801 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 17:07:00.420162 472801 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 17:07:02.322497 472801 element_impl.hpp:199] creating element u : u +I0114 17:07:02.526176 472801 element_impl.hpp:199] creating element {x+y+z,x+y+z,x+y+z}:x:y:z : u +I0114 17:07:02.526259 472801 exporterimpl.hpp:219] [Exporter] format : ensightgold +I0114 17:07:02.526262 472801 exporterimpl.hpp:220] [Exporter] N : 1 +I0114 17:07:02.617584 472801 partitionio.hpp:319] writing mesh in HDF5 format in /data/scratch/cladellash/feelppdb/app-feelpp-io/io/acc22360/ThermalBridgesENISO10211/mesh_0.h5 +I0114 17:07:02.836104 472801 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 17:07:02.852108 472801 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 17:07:02.852123 472801 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 17:07:02.854234 472801 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 132312 on processor 0 +I0114 17:07:03.267907 472801 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 24868 +I0114 17:07:03.267954 472801 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 17:07:03.524614 472801 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 17:07:04.044207 472801 element_impl.hpp:199] creating element u : u +I0114 17:07:04.307955 472801 element_impl.hpp:199] creating element uV : u +I0114 17:07:04.307984 472801 element_impl.hpp:199] creating element uV : u +I0114 17:07:04.307994 472801 element_impl.hpp:199] creating element uV : u +I0114 17:07:04.312108 472801 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 17:07:04.321861 472801 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 17:07:04.321873 472801 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 17:07:04.324240 472801 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 132312 on processor 0 +I0114 17:07:04.727931 472801 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 24868 +I0114 17:07:04.727993 472801 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 17:07:05.062290 472801 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 17:07:06.291851 472801 exporterensightgold_impl.hpp:1250] writing part 1 +I0114 17:07:06.354267 472801 exporterensightgold_impl.hpp:1250] writing part 2 +I0114 17:07:06.405103 472801 exporterensightgold_impl.hpp:1250] writing part 3 +I0114 17:07:06.418414 472801 exporterensightgold_impl.hpp:1250] writing part 4 +I0114 17:07:06.442852 472801 exporterensightgold_impl.hpp:1250] writing part 5 +I0114 17:07:06.454897 472801 exporterensightgold_impl.hpp:1250] writing part 6 +I0114 17:07:06.462023 472801 exporterensightgold_impl.hpp:1376] ExporterEnsightGold::writeVariableFiles Nodal: 2 +I0114 17:07:06.462026 472801 exporterensightgold_impl.hpp:1377] ExporterEnsightGold::writeVariableFiles Element: 0 +I0114 17:07:07.608386 472801 environment.cpp:2423] Environment::clearSomeMemory before: PETSC get current memory usage (resident memory): 941621 KBytes 941.621 MBytes 0.941621 GBytes +I0114 17:07:07.608402 472801 environment.cpp:2428] Environment::clearSomeMemory before: PETSC get current PETSC Malloc usage: 0 KBytes 0 MBytes 0 GBytes +I0114 17:07:07.608408 472801 environment.cpp:2430] Environment::clearSomeMemory before: PETSC get maximum PETSC Malloc usage(largest memory ever used so far): 0 KBytes 0 MBytes 0 GBytes +I0114 17:07:07.608564 472801 environment.cpp:2423] Environment::clearSomeMemory after: PETSC get current memory usage (resident memory): 941621 KBytes 941.621 MBytes 0.941621 GBytes +I0114 17:07:07.608569 472801 environment.cpp:2428] Environment::clearSomeMemory after: PETSC get current PETSC Malloc usage: 0 KBytes 0 MBytes 0 GBytes +I0114 17:07:07.608572 472801 environment.cpp:2430] Environment::clearSomeMemory after: PETSC get maximum PETSC Malloc usage(largest memory ever used so far): 0 KBytes 0 MBytes 0 GBytes + +---- +== feelpp_app_io.WARNING + +[source,bash] +---- +Log file created at: 2026/01/14 17:06:58 +Running on machine: gaya2 +Log line format: [IWEF]mmdd hh:mm:ss.uuuuuu threadid file:line] msg +W0114 17:06:58.174434 472801 doftable.hpp:2587] TODO: finish implementation of this case below +W0114 17:07:00.420162 472801 doftable.hpp:2587] TODO: finish implementation of this case below +W0114 17:07:03.524614 472801 doftable.hpp:2587] TODO: finish implementation of this case below +W0114 17:07:05.062290 472801 doftable.hpp:2587] TODO: finish implementation of this case below + +---- + diff --git a/tmp/results/feelpp_app_io/ThermalBridgesENISO10211/gaya/2026_01_14T16_47_36/logs/af868df5.adoc b/tmp/results/feelpp_app_io/ThermalBridgesENISO10211/gaya/2026_01_14T16_47_36/logs/af868df5.adoc new file mode 100644 index 0000000..88f13b8 --- /dev/null +++ b/tmp/results/feelpp_app_io/ThermalBridgesENISO10211/gaya/2026_01_14T16_47_36/logs/af868df5.adoc @@ -0,0 +1,182 @@ += ReFrame logs + +== ReFrame scheduler script + +[source,bash] +---- +#!/bin/bash +#SBATCH --job-name="rfm_RegressionTest_af868df5" +#SBATCH --ntasks=4 +#SBATCH --ntasks-per-node=4 +#SBATCH --cpus-per-task=1 +#SBATCH --output=rfm_job.out +#SBATCH --error=rfm_job.err +#SBATCH --exclusive +#SBATCH --partition=public +#SBATCH --threads-per-core=1 +#SBATCH --time=0-00:15:00 +source /etc/profile.d/modules.sh +export PATH=/opt/apptainer/latest/bin/:$PATH +srun --cpus-per-task=1 apptainer exec -B"/data/home/cladellash/actions-runner/_work/apps-feelpp/apps-feelpp/reframe/stage/gaya/public/default/RegressionTest_af868df5:/rfm_workdir" --home /data/scratch/cladellash/feelppdb --bind /data/scratch/cladellash/feelppdb/input_data/:/input_data --env OMP_NUM_THREADS=1 --sharens --bind /opt/:/opt/ --bind /data/:/data/ /data/scratch/cladellash/images//apps-feelpp.sif feelpp_app_io --directory /data/scratch/cladellash/feelppdb/app-feelpp-io/io/af868df5/ThermalBridgesENISO10211 --discretization P2 --repository.append.np 0 --gmsh.filename /input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M2/case3_p4.json --nrun 1 + +---- + +== ReFrame error log + +[source,bash] +---- +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + + +---- + +== ReFrame output log + +[source,bash] +---- +[ Starting Feel++ ] application O version 0.111.0-preview.120 date 2026-Jan-14 +[feelpp] create Feel++ root repository: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/af868df5/ThermalBridgesENISO10211 + +[feelpp] create Feel++ geo repository: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/af868df5/ThermalBridgesENISO10211/geo + +[feelpp] create Feel++ expressions directory: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/af868df5/ThermalBridgesENISO10211/exprs + +[feelpp] create Feel++ logs directory: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/af868df5/ThermalBridgesENISO10211/logs + + . O files are stored in /data/scratch/cladellash/feelppdb/app-feelpp-io/io/af868df5/ThermalBridgesENISO10211/ + .. logfiles :/data/scratch/cladellash/feelppdb/app-feelpp-io/io/af868df5/ThermalBridgesENISO10211/logs +[loadMesh] Loading mesh in format json+h5: "/input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M2/case3_p4.json" +[loadMesh] Time : 35.3783s + [create function space] Time : 82.8774s + [create vectorial function space] Time : 152.939s + [save field] Time : 0.26678s + [save vector field] Time : 0.743774s + [save mesh] Time : 1.85635s + [export time] Time : 98.6031s +Time load mesh 35.3783 +Time load create function space 82.8774 +Time load create vectorial function space 152.939 +Time save mesh 1.85635 +Time save field 0.26678 +Time save vector field 0.743774 +Time to export 98.6031 ++----------------------------------------------------------------------------------------------------------------------------------------------------+ +| O | ++----------------------------------------------------------------------------------------------------------------------------------------------------+ +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | +| | logs | /data/scratch/cladellash/feelppdb/app-feelpp-io/io/af868df5/ThermalBridgesENISO10211/logs | | +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | +| | journal | /data/scratch/cladellash/feelppdb/app-feelpp-io/io/af868df5/ThermalBridgesENISO10211/journal.json | | +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | +| | directories | +------------------------------------------------------------------------------------------------------------------------------+ | | +| | | | /data/scratch/cladellash/feelppdb/app-feelpp-io/io/af868df5/ThermalBridgesENISO10211/ | | | +| | | +------------------------------------------------------------------------------------------------------------------------------+ | | +| | | | /data/home/cladellash/actions-runner/_work/apps-feelpp/apps-feelpp/reframe/stage/gaya/public/default/RegressionTest_af868df5 | | | +| | | +------------------------------------------------------------------------------------------------------------------------------+ | | +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | ++----------------------------------------------------------------------------------------------------------------------------------------------------+ + +[ Stopping Feel++ ] application O execution time 448.763s + +---- + +== feelpp_app_io.INFO + +[source,bash] +---- +Log file created at: 2026/01/14 17:00:05 +Running on machine: gaya3 +Log line format: [IWEF]mmdd hh:mm:ss.uuuuuu threadid file:line] msg +I0114 17:00:05.716655 755057 environment.cpp:1708] File /input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M2/case3_p4.json found +I0114 17:00:05.718140 755057 loadmesh.hpp:246] Loading mesh in json+h5 format "/input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M2/case3_p4.json" +I0114 17:00:05.750713 755057 partitionio.hpp:1134] read stat points 1456202,366133,0 +I0114 17:00:05.750720 755057 partitionio.hpp:1137] read stat elements 8398049,2101172,0 +I0114 17:00:05.750722 755057 partitionio.hpp:1140] read stat ghost_elements 208856,53874,0 +I0114 17:00:05.750723 755057 partitionio.hpp:1143] read stat marked_faces 374422,100120,0 +I0114 17:00:05.750725 755057 partitionio.hpp:1146] read stat marked_edges 0,0,0 +I0114 17:00:05.750726 755057 partitionio.hpp:1149] read stat marked_points 0,0,0 +I0114 17:00:05.751078 755057 partitionio.hpp:1168] loaded points_ids:1x1456202 +I0114 17:00:05.751374 755057 partitionio.hpp:1170] loaded points_coords:1x4368606 +I0114 17:00:05.952572 755057 partitionio.hpp:1267] loaded elements:1x41990245 +I0114 17:00:08.285161 755057 partitionio.hpp:1373] loaded ghost_elements:1x208856 +I0114 17:00:08.417744 755057 partitionio.hpp:1569] loaded marked_subentities:1x1497688 +I0114 17:00:09.437368 755057 meshimpl.hpp:1051] We have 100120 faces in the database +I0114 17:00:17.107483 755057 meshimpl.hpp:1325] We have now 4262898 faces in the mesh +I0114 17:00:35.017038 755057 meshimpl.hpp:1863] update boundary points... +I0114 17:00:35.257536 755057 meshimpl.hpp:1883] update boundary elements... +I0114 17:00:41.070191 755057 meshimpl.hpp:524] h average : 0.01632 +I0114 17:00:41.070600 755057 meshimpl.hpp:525] h min : 0.0098099 +I0114 17:00:41.070602 755057 meshimpl.hpp:526] h max : 0.0226452 +I0114 17:00:41.111320 755057 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 17:00:41.634665 755057 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 17:00:41.634682 755057 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 17:00:41.651177 755057 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 2047298 on processor 0 +I0114 17:01:16.119681 755057 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 2818433 +I0114 17:01:16.120170 755057 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 17:01:26.964753 755057 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 17:02:04.009934 755057 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 17:02:04.243929 755057 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 17:02:04.243952 755057 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 17:02:04.267627 755057 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 2047298 on processor 0 +I0114 17:03:02.038722 755057 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 8455299 +I0114 17:03:02.039187 755057 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 17:03:17.853976 755057 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 17:04:36.950762 755057 element_impl.hpp:199] creating element u : u +I0114 17:04:44.231971 755057 element_impl.hpp:199] creating element {x+y+z,x+y+z,x+y+z}:x:y:z : u +I0114 17:04:44.234936 755057 exporterimpl.hpp:219] [Exporter] format : ensightgold +I0114 17:04:44.234942 755057 exporterimpl.hpp:220] [Exporter] N : 1 +I0114 17:04:45.644400 755057 partitionio.hpp:319] writing mesh in HDF5 format in /data/scratch/cladellash/feelppdb/app-feelpp-io/io/af868df5/ThermalBridgesENISO10211/mesh_0.h5 +I0114 17:04:47.134083 755057 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 17:04:47.490540 755057 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 17:04:47.490561 755057 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 17:04:47.571157 755057 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 2047298 on processor 0 +I0114 17:04:59.622416 755057 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 356293 +I0114 17:04:59.622536 755057 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 17:05:04.420007 755057 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 17:05:19.722026 755057 element_impl.hpp:199] creating element u : u +I0114 17:05:25.541100 755057 element_impl.hpp:199] creating element uV : u +I0114 17:05:25.541401 755057 element_impl.hpp:199] creating element uV : u +I0114 17:05:25.541682 755057 element_impl.hpp:199] creating element uV : u +I0114 17:05:25.580480 755057 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 17:05:25.739723 755057 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 17:05:25.739742 755057 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 17:05:25.765170 755057 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 2047298 on processor 0 +I0114 17:05:57.759861 755057 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 2818433 +I0114 17:05:57.759985 755057 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 17:06:06.976833 755057 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 17:07:00.661556 755057 exporterensightgold_impl.hpp:1250] writing part 1 +I0114 17:07:00.957751 755057 exporterensightgold_impl.hpp:1250] writing part 2 +I0114 17:07:01.124641 755057 exporterensightgold_impl.hpp:1250] writing part 3 +I0114 17:07:01.177281 755057 exporterensightgold_impl.hpp:1250] writing part 4 +I0114 17:07:01.209457 755057 exporterensightgold_impl.hpp:1250] writing part 5 +I0114 17:07:01.239580 755057 exporterensightgold_impl.hpp:1250] writing part 6 +I0114 17:07:01.258962 755057 exporterensightgold_impl.hpp:1376] ExporterEnsightGold::writeVariableFiles Nodal: 2 +I0114 17:07:01.258968 755057 exporterensightgold_impl.hpp:1377] ExporterEnsightGold::writeVariableFiles Element: 0 +I0114 17:07:34.200762 755057 environment.cpp:2423] Environment::clearSomeMemory before: PETSC get current memory usage (resident memory): 1.90421e+07 KBytes 19042.1 MBytes 19.0421 GBytes +I0114 17:07:34.200802 755057 environment.cpp:2428] Environment::clearSomeMemory before: PETSC get current PETSC Malloc usage: 0 KBytes 0 MBytes 0 GBytes +I0114 17:07:34.200810 755057 environment.cpp:2430] Environment::clearSomeMemory before: PETSC get maximum PETSC Malloc usage(largest memory ever used so far): 0 KBytes 0 MBytes 0 GBytes +I0114 17:07:34.200845 755057 environment.cpp:2423] Environment::clearSomeMemory after: PETSC get current memory usage (resident memory): 1.90421e+07 KBytes 19042.1 MBytes 19.0421 GBytes +I0114 17:07:34.200848 755057 environment.cpp:2428] Environment::clearSomeMemory after: PETSC get current PETSC Malloc usage: 0 KBytes 0 MBytes 0 GBytes +I0114 17:07:34.200850 755057 environment.cpp:2430] Environment::clearSomeMemory after: PETSC get maximum PETSC Malloc usage(largest memory ever used so far): 0 KBytes 0 MBytes 0 GBytes + +---- +== feelpp_app_io.WARNING + +[source,bash] +---- +Log file created at: 2026/01/14 17:01:26 +Running on machine: gaya3 +Log line format: [IWEF]mmdd hh:mm:ss.uuuuuu threadid file:line] msg +W0114 17:01:26.964753 755057 doftable.hpp:2587] TODO: finish implementation of this case below +W0114 17:03:17.853976 755057 doftable.hpp:2587] TODO: finish implementation of this case below +W0114 17:05:04.420007 755057 doftable.hpp:2587] TODO: finish implementation of this case below +W0114 17:06:06.976833 755057 doftable.hpp:2587] TODO: finish implementation of this case below + +---- + diff --git a/tmp/results/feelpp_app_io/ThermalBridgesENISO10211/gaya/2026_01_14T16_47_36/logs/b5b58843.adoc b/tmp/results/feelpp_app_io/ThermalBridgesENISO10211/gaya/2026_01_14T16_47_36/logs/b5b58843.adoc new file mode 100644 index 0000000..2314019 --- /dev/null +++ b/tmp/results/feelpp_app_io/ThermalBridgesENISO10211/gaya/2026_01_14T16_47_36/logs/b5b58843.adoc @@ -0,0 +1,206 @@ += ReFrame logs + +== ReFrame scheduler script + +[source,bash] +---- +#!/bin/bash +#SBATCH --job-name="rfm_RegressionTest_b5b58843" +#SBATCH --ntasks=16 +#SBATCH --ntasks-per-node=16 +#SBATCH --cpus-per-task=1 +#SBATCH --output=rfm_job.out +#SBATCH --error=rfm_job.err +#SBATCH --exclusive +#SBATCH --partition=public +#SBATCH --threads-per-core=1 +#SBATCH --time=0-00:15:00 +source /etc/profile.d/modules.sh +export PATH=/opt/apptainer/latest/bin/:$PATH +srun --cpus-per-task=1 apptainer exec -B"/data/home/cladellash/actions-runner/_work/apps-feelpp/apps-feelpp/reframe/stage/gaya/public/default/RegressionTest_b5b58843:/rfm_workdir" --home /data/scratch/cladellash/feelppdb --bind /data/scratch/cladellash/feelppdb/input_data/:/input_data --env OMP_NUM_THREADS=1 --sharens --bind /opt/:/opt/ --bind /data/:/data/ /data/scratch/cladellash/images//apps-feelpp.sif feelpp_app_io --directory /data/scratch/cladellash/feelppdb/app-feelpp-io/io/b5b58843/ThermalBridgesENISO10211 --discretization P2 --repository.append.np 0 --gmsh.filename /input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M2/case3_p16.json --nrun 1 + +---- + +== ReFrame error log + +[source,bash] +---- +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + + +---- + +== ReFrame output log + +[source,bash] +---- +[ Starting Feel++ ] application O version 0.111.0-preview.120 date 2026-Jan-14 +[feelpp] create Feel++ root repository: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/b5b58843/ThermalBridgesENISO10211 + +[feelpp] create Feel++ geo repository: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/b5b58843/ThermalBridgesENISO10211/geo + +[feelpp] create Feel++ expressions directory: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/b5b58843/ThermalBridgesENISO10211/exprs + +[feelpp] create Feel++ logs directory: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/b5b58843/ThermalBridgesENISO10211/logs + + . O files are stored in /data/scratch/cladellash/feelppdb/app-feelpp-io/io/b5b58843/ThermalBridgesENISO10211/ + .. logfiles :/data/scratch/cladellash/feelppdb/app-feelpp-io/io/b5b58843/ThermalBridgesENISO10211/logs +[loadMesh] Loading mesh in format json+h5: "/input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M2/case3_p16.json" +[loadMesh] Time : 11.3533s + [create function space] Time : 21.7715s + [create vectorial function space] Time : 40.9719s + [save field] Time : 0.334386s + [save vector field] Time : 0.86232s + [save mesh] Time : 1.59799s + [export time] Time : 26.7159s +Time load mesh 11.3533 +Time load create function space 21.7715 +Time load create vectorial function space 40.9719 +Time save mesh 1.59799 +Time save field 0.334386 +Time save vector field 0.86232 +Time to export 26.7159 ++----------------------------------------------------------------------------------------------------------------------------------------------------+ +| O | ++----------------------------------------------------------------------------------------------------------------------------------------------------+ +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | +| | logs | /data/scratch/cladellash/feelppdb/app-feelpp-io/io/b5b58843/ThermalBridgesENISO10211/logs | | +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | +| | journal | /data/scratch/cladellash/feelppdb/app-feelpp-io/io/b5b58843/ThermalBridgesENISO10211/journal.json | | +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | +| | directories | +------------------------------------------------------------------------------------------------------------------------------+ | | +| | | | /data/scratch/cladellash/feelppdb/app-feelpp-io/io/b5b58843/ThermalBridgesENISO10211/ | | | +| | | +------------------------------------------------------------------------------------------------------------------------------+ | | +| | | | /data/home/cladellash/actions-runner/_work/apps-feelpp/apps-feelpp/reframe/stage/gaya/public/default/RegressionTest_b5b58843 | | | +| | | +------------------------------------------------------------------------------------------------------------------------------+ | | +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | ++----------------------------------------------------------------------------------------------------------------------------------------------------+ + +[ Stopping Feel++ ] application O execution time 124.145s + +---- + +== feelpp_app_io.INFO + +[source,bash] +---- +Log file created at: 2026/01/14 16:49:35 +Running on machine: gaya2 +Log line format: [IWEF]mmdd hh:mm:ss.uuuuuu threadid file:line] msg +I0114 16:49:35.423302 471948 environment.cpp:1708] File /input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M2/case3_p16.json found +I0114 16:49:35.425050 471948 loadmesh.hpp:246] Loading mesh in json+h5 format "/input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M2/case3_p16.json" +I0114 16:49:35.473531 471948 partitionio.hpp:1134] read stat points 1545801,94312,0 +I0114 16:49:35.473541 471948 partitionio.hpp:1137] read stat elements 8733669,534457,0 +I0114 16:49:35.473543 471948 partitionio.hpp:1140] read stat ghost_elements 544476,23125,0 +I0114 16:49:35.473546 471948 partitionio.hpp:1143] read stat marked_faces 374422,26583,0 +I0114 16:49:35.473547 471948 partitionio.hpp:1146] read stat marked_edges 0,0,0 +I0114 16:49:35.473549 471948 partitionio.hpp:1149] read stat marked_points 0,0,0 +I0114 16:49:35.474157 471948 partitionio.hpp:1168] loaded points_ids:1x1545801 +I0114 16:49:35.474686 471948 partitionio.hpp:1170] loaded points_coords:1x4637403 +I0114 16:49:35.607780 471948 partitionio.hpp:1267] loaded elements:1x43668345 +I0114 16:49:36.586478 471948 partitionio.hpp:1373] loaded ghost_elements:1x544476 +I0114 16:49:36.599361 471948 partitionio.hpp:1569] loaded marked_subentities:1x1497688 +I0114 16:49:36.986748 471948 meshimpl.hpp:1051] We have 26583 faces in the database +I0114 16:49:38.874663 471948 meshimpl.hpp:1325] We have now 1086293 faces in the mesh +I0114 16:49:44.491057 471948 meshimpl.hpp:1863] update boundary points... +I0114 16:49:44.555768 471948 meshimpl.hpp:1883] update boundary elements... +I0114 16:49:46.743003 471948 meshimpl.hpp:524] h average : 0.01632 +I0114 16:49:46.743073 471948 meshimpl.hpp:525] h min : 0.0098099 +I0114 16:49:46.743076 471948 meshimpl.hpp:526] h max : 0.0226452 +I0114 16:49:46.762459 471948 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 16:49:46.896138 471948 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 16:49:46.896152 471948 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 16:49:46.902256 471948 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 511332 on processor 0 +I0114 16:49:55.753564 471948 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 707850 +I0114 16:49:55.753764 471948 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 16:49:58.683914 471948 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 16:50:08.539978 471948 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 16:50:08.597738 471948 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 16:50:08.597756 471948 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 16:50:08.603876 471948 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 511332 on processor 0 +I0114 16:50:22.432016 471948 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 2123550 +I0114 16:50:22.432134 471948 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 16:50:28.538087 471948 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 16:50:49.512601 471948 element_impl.hpp:199] creating element u : u +I0114 16:50:51.609803 471948 element_impl.hpp:199] creating element {x+y+z,x+y+z,x+y+z}:x:y:z : u +I0114 16:50:51.611452 471948 exporterimpl.hpp:219] [Exporter] format : ensightgold +I0114 16:50:51.611464 471948 exporterimpl.hpp:220] [Exporter] N : 1 +I0114 16:50:52.896893 471948 partitionio.hpp:319] writing mesh in HDF5 format in /data/scratch/cladellash/feelppdb/app-feelpp-io/io/b5b58843/ThermalBridgesENISO10211/mesh_0.h5 +I0114 16:50:54.448110 471948 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 16:50:54.546077 471948 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 16:50:54.546087 471948 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 16:50:54.551869 471948 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 511332 on processor 0 +I0114 16:50:57.849447 471948 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 90040 +I0114 16:50:57.849493 471948 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 16:50:59.027172 471948 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 16:51:03.355860 471948 element_impl.hpp:199] creating element u : u +I0114 16:51:04.691593 471948 element_impl.hpp:199] creating element uV : u +I0114 16:51:04.691736 471948 element_impl.hpp:199] creating element uV : u +I0114 16:51:04.692040 471948 element_impl.hpp:199] creating element uV : u +I0114 16:51:04.715279 471948 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 16:51:04.760991 471948 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 16:51:04.761003 471948 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 16:51:04.770382 471948 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 511332 on processor 0 +I0114 16:51:13.043141 471948 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 707850 +I0114 16:51:13.043220 471948 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 16:51:15.736255 471948 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 16:51:29.916642 471948 exporterensightgold_impl.hpp:1250] writing part 1 +I0114 16:51:30.040974 471948 exporterensightgold_impl.hpp:1250] writing part 2 +I0114 16:51:30.043884 471948 exporterensightgold_impl.hpp:1250] writing part 3 +I0114 16:51:30.047237 471948 exporterensightgold_impl.hpp:1250] writing part 4 +I0114 16:51:30.072183 471948 exporterensightgold_impl.hpp:1250] writing part 5 +I0114 16:51:30.296427 471948 exporterensightgold_impl.hpp:1250] writing part 6 +I0114 16:51:30.429376 471948 exporterensightgold_impl.hpp:1376] ExporterEnsightGold::writeVariableFiles Nodal: 2 +I0114 16:51:30.429383 471948 exporterensightgold_impl.hpp:1377] ExporterEnsightGold::writeVariableFiles Element: 0 +I0114 16:51:39.231207 471948 environment.cpp:2423] Environment::clearSomeMemory before: PETSC get current memory usage (resident memory): 4.97654e+06 KBytes 4976.54 MBytes 4.97654 GBytes +I0114 16:51:39.231235 471948 environment.cpp:2428] Environment::clearSomeMemory before: PETSC get current PETSC Malloc usage: 0 KBytes 0 MBytes 0 GBytes +I0114 16:51:39.231243 471948 environment.cpp:2430] Environment::clearSomeMemory before: PETSC get maximum PETSC Malloc usage(largest memory ever used so far): 0 KBytes 0 MBytes 0 GBytes +I0114 16:51:39.231271 471948 environment.cpp:2423] Environment::clearSomeMemory after: PETSC get current memory usage (resident memory): 4.97654e+06 KBytes 4976.54 MBytes 4.97654 GBytes +I0114 16:51:39.231276 471948 environment.cpp:2428] Environment::clearSomeMemory after: PETSC get current PETSC Malloc usage: 0 KBytes 0 MBytes 0 GBytes +I0114 16:51:39.231277 471948 environment.cpp:2430] Environment::clearSomeMemory after: PETSC get maximum PETSC Malloc usage(largest memory ever used so far): 0 KBytes 0 MBytes 0 GBytes + +---- +== feelpp_app_io.WARNING + +[source,bash] +---- +Log file created at: 2026/01/14 16:49:58 +Running on machine: gaya2 +Log line format: [IWEF]mmdd hh:mm:ss.uuuuuu threadid file:line] msg +W0114 16:49:58.683914 471948 doftable.hpp:2587] TODO: finish implementation of this case below +W0114 16:50:28.538087 471948 doftable.hpp:2587] TODO: finish implementation of this case below +W0114 16:50:59.027172 471948 doftable.hpp:2587] TODO: finish implementation of this case below +W0114 16:51:15.736255 471948 doftable.hpp:2587] TODO: finish implementation of this case below + +---- + diff --git a/tmp/results/feelpp_app_io/ThermalBridgesENISO10211/gaya/2026_01_14T16_47_36/logs/b65a0f2e.adoc b/tmp/results/feelpp_app_io/ThermalBridgesENISO10211/gaya/2026_01_14T16_47_36/logs/b65a0f2e.adoc new file mode 100644 index 0000000..d4d217c --- /dev/null +++ b/tmp/results/feelpp_app_io/ThermalBridgesENISO10211/gaya/2026_01_14T16_47_36/logs/b65a0f2e.adoc @@ -0,0 +1,182 @@ += ReFrame logs + +== ReFrame scheduler script + +[source,bash] +---- +#!/bin/bash +#SBATCH --job-name="rfm_RegressionTest_b65a0f2e" +#SBATCH --ntasks=4 +#SBATCH --ntasks-per-node=4 +#SBATCH --cpus-per-task=1 +#SBATCH --output=rfm_job.out +#SBATCH --error=rfm_job.err +#SBATCH --exclusive +#SBATCH --partition=public +#SBATCH --threads-per-core=1 +#SBATCH --time=0-00:15:00 +source /etc/profile.d/modules.sh +export PATH=/opt/apptainer/latest/bin/:$PATH +srun --cpus-per-task=1 apptainer exec -B"/data/home/cladellash/actions-runner/_work/apps-feelpp/apps-feelpp/reframe/stage/gaya/public/default/RegressionTest_b65a0f2e:/rfm_workdir" --home /data/scratch/cladellash/feelppdb --bind /data/scratch/cladellash/feelppdb/input_data/:/input_data --env OMP_NUM_THREADS=1 --sharens --bind /opt/:/opt/ --bind /data/:/data/ /data/scratch/cladellash/images//apps-feelpp.sif feelpp_app_io --directory /data/scratch/cladellash/feelppdb/app-feelpp-io/io/b65a0f2e/ThermalBridgesENISO10211 --discretization P1 --repository.append.np 0 --gmsh.filename /input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M1/case3_p4.json --nrun 1 + +---- + +== ReFrame error log + +[source,bash] +---- +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + + +---- + +== ReFrame output log + +[source,bash] +---- +[ Starting Feel++ ] application O version 0.111.0-preview.120 date 2026-Jan-14 +[feelpp] create Feel++ root repository: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/b65a0f2e/ThermalBridgesENISO10211 + +[feelpp] create Feel++ geo repository: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/b65a0f2e/ThermalBridgesENISO10211/geo + +[feelpp] create Feel++ expressions directory: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/b65a0f2e/ThermalBridgesENISO10211/exprs + +[feelpp] create Feel++ logs directory: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/b65a0f2e/ThermalBridgesENISO10211/logs + + . O files are stored in /data/scratch/cladellash/feelppdb/app-feelpp-io/io/b65a0f2e/ThermalBridgesENISO10211/ + .. logfiles :/data/scratch/cladellash/feelppdb/app-feelpp-io/io/b65a0f2e/ThermalBridgesENISO10211/logs +[loadMesh] Loading mesh in format json+h5: "/input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M1/case3_p4.json" +[loadMesh] Time : 3.78405s + [create function space] Time : 2.75514s + [create vectorial function space] Time : 6.51345s + [save field] Time : 0.0194713s + [save vector field] Time : 0.0294978s + [save mesh] Time : 0.248209s + [export time] Time : 3.93297s +Time load mesh 3.78405 +Time load create function space 2.75514 +Time load create vectorial function space 6.51345 +Time save mesh 0.248209 +Time save field 0.0194713 +Time save vector field 0.0294978 +Time to export 3.93297 ++----------------------------------------------------------------------------------------------------------------------------------------------------+ +| O | ++----------------------------------------------------------------------------------------------------------------------------------------------------+ +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | +| | logs | /data/scratch/cladellash/feelppdb/app-feelpp-io/io/b65a0f2e/ThermalBridgesENISO10211/logs | | +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | +| | journal | /data/scratch/cladellash/feelppdb/app-feelpp-io/io/b65a0f2e/ThermalBridgesENISO10211/journal.json | | +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | +| | directories | +------------------------------------------------------------------------------------------------------------------------------+ | | +| | | | /data/scratch/cladellash/feelppdb/app-feelpp-io/io/b65a0f2e/ThermalBridgesENISO10211/ | | | +| | | +------------------------------------------------------------------------------------------------------------------------------+ | | +| | | | /data/home/cladellash/actions-runner/_work/apps-feelpp/apps-feelpp/reframe/stage/gaya/public/default/RegressionTest_b65a0f2e | | | +| | | +------------------------------------------------------------------------------------------------------------------------------+ | | +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | ++----------------------------------------------------------------------------------------------------------------------------------------------------+ + +[ Stopping Feel++ ] application O execution time 22.5546s + +---- + +== feelpp_app_io.INFO + +[source,bash] +---- +Log file created at: 2026/01/14 16:58:52 +Running on machine: gaya3 +Log line format: [IWEF]mmdd hh:mm:ss.uuuuuu threadid file:line] msg +I0114 16:58:52.931365 754599 environment.cpp:1708] File /input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M1/case3_p4.json found +I0114 16:58:52.932797 754599 loadmesh.hpp:246] Loading mesh in json+h5 format "/input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M1/case3_p4.json" +I0114 16:58:52.987088 754599 partitionio.hpp:1134] read stat points 208257,51053,0 +I0114 16:58:52.987095 754599 partitionio.hpp:1137] read stat elements 1111009,276136,0 +I0114 16:58:52.987097 754599 partitionio.hpp:1140] read stat ghost_elements 52517,11513,0 +I0114 16:58:52.987099 754599 partitionio.hpp:1143] read stat marked_faces 94934,22372,0 +I0114 16:58:52.987100 754599 partitionio.hpp:1146] read stat marked_edges 0,0,0 +I0114 16:58:52.987102 754599 partitionio.hpp:1149] read stat marked_points 0,0,0 +I0114 16:58:52.987429 754599 partitionio.hpp:1168] loaded points_ids:1x208257 +I0114 16:58:52.987757 754599 partitionio.hpp:1170] loaded points_coords:1x624771 +I0114 16:58:53.029603 754599 partitionio.hpp:1267] loaded elements:1x5555045 +I0114 16:58:53.181263 754599 partitionio.hpp:1373] loaded ghost_elements:1x52517 +I0114 16:58:53.189520 754599 partitionio.hpp:1569] loaded marked_subentities:1x379736 +I0114 16:58:53.266351 754599 meshimpl.hpp:1051] We have 22372 faces in the database +I0114 16:58:54.047047 754599 meshimpl.hpp:1325] We have now 565557 faces in the mesh +I0114 16:58:55.992981 754599 meshimpl.hpp:1863] update boundary points... +I0114 16:58:56.031102 754599 meshimpl.hpp:1883] update boundary elements... +I0114 16:58:56.694314 754599 meshimpl.hpp:524] h average : 0.0325846 +I0114 16:58:56.694362 754599 meshimpl.hpp:525] h min : 0.0175455 +I0114 16:58:56.694365 754599 meshimpl.hpp:526] h max : 0.044348 +I0114 16:58:56.737823 754599 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 16:58:56.802172 754599 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 16:58:56.802187 754599 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 16:58:56.804589 754599 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 264623 on processor 0 +I0114 16:58:57.836208 754599 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 48795 +I0114 16:58:57.836320 754599 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 16:58:58.446686 754599 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 16:58:59.500258 754599 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 16:58:59.540400 754599 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 16:58:59.540416 754599 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 16:58:59.544703 754599 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 264623 on processor 0 +I0114 16:59:01.692184 754599 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 146385 +I0114 16:59:01.692319 754599 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 16:59:02.723214 754599 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 16:59:06.013788 754599 element_impl.hpp:199] creating element u : u +I0114 16:59:06.434211 754599 element_impl.hpp:199] creating element {x+y+z,x+y+z,x+y+z}:x:y:z : u +I0114 16:59:06.434312 754599 exporterimpl.hpp:219] [Exporter] format : ensightgold +I0114 16:59:06.434315 754599 exporterimpl.hpp:220] [Exporter] N : 1 +I0114 16:59:06.534337 754599 partitionio.hpp:319] writing mesh in HDF5 format in /data/scratch/cladellash/feelppdb/app-feelpp-io/io/b65a0f2e/ThermalBridgesENISO10211/mesh_0.h5 +I0114 16:59:06.737507 754599 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 16:59:06.767053 754599 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 16:59:06.767068 754599 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 16:59:06.770915 754599 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 264623 on processor 0 +I0114 16:59:07.546583 754599 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 48795 +I0114 16:59:07.546623 754599 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 16:59:08.088044 754599 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 16:59:08.959313 754599 element_impl.hpp:199] creating element u : u +I0114 16:59:09.419042 754599 element_impl.hpp:199] creating element uV : u +I0114 16:59:09.419090 754599 element_impl.hpp:199] creating element uV : u +I0114 16:59:09.419123 754599 element_impl.hpp:199] creating element uV : u +I0114 16:59:09.425025 754599 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 16:59:09.443995 754599 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 16:59:09.444008 754599 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 16:59:09.447944 754599 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 264623 on processor 0 +I0114 16:59:10.284806 754599 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 48795 +I0114 16:59:10.284861 754599 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 16:59:10.681435 754599 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 16:59:13.012863 754599 exporterensightgold_impl.hpp:1250] writing part 1 +I0114 16:59:13.039659 754599 exporterensightgold_impl.hpp:1250] writing part 2 +I0114 16:59:13.055660 754599 exporterensightgold_impl.hpp:1250] writing part 3 +I0114 16:59:13.072916 754599 exporterensightgold_impl.hpp:1250] writing part 4 +I0114 16:59:13.098951 754599 exporterensightgold_impl.hpp:1250] writing part 5 +I0114 16:59:13.127977 754599 exporterensightgold_impl.hpp:1250] writing part 6 +I0114 16:59:13.146838 754599 exporterensightgold_impl.hpp:1376] ExporterEnsightGold::writeVariableFiles Nodal: 2 +I0114 16:59:13.146842 754599 exporterensightgold_impl.hpp:1377] ExporterEnsightGold::writeVariableFiles Element: 0 +I0114 16:59:15.213120 754599 environment.cpp:2423] Environment::clearSomeMemory before: PETSC get current memory usage (resident memory): 1.72805e+06 KBytes 1728.05 MBytes 1.72805 GBytes +I0114 16:59:15.213143 754599 environment.cpp:2428] Environment::clearSomeMemory before: PETSC get current PETSC Malloc usage: 0 KBytes 0 MBytes 0 GBytes +I0114 16:59:15.213151 754599 environment.cpp:2430] Environment::clearSomeMemory before: PETSC get maximum PETSC Malloc usage(largest memory ever used so far): 0 KBytes 0 MBytes 0 GBytes +I0114 16:59:15.213320 754599 environment.cpp:2423] Environment::clearSomeMemory after: PETSC get current memory usage (resident memory): 1.72805e+06 KBytes 1728.05 MBytes 1.72805 GBytes +I0114 16:59:15.213325 754599 environment.cpp:2428] Environment::clearSomeMemory after: PETSC get current PETSC Malloc usage: 0 KBytes 0 MBytes 0 GBytes +I0114 16:59:15.213326 754599 environment.cpp:2430] Environment::clearSomeMemory after: PETSC get maximum PETSC Malloc usage(largest memory ever used so far): 0 KBytes 0 MBytes 0 GBytes + +---- +== feelpp_app_io.WARNING + +[source,bash] +---- +Log file created at: 2026/01/14 16:58:58 +Running on machine: gaya3 +Log line format: [IWEF]mmdd hh:mm:ss.uuuuuu threadid file:line] msg +W0114 16:58:58.446686 754599 doftable.hpp:2587] TODO: finish implementation of this case below +W0114 16:59:02.723214 754599 doftable.hpp:2587] TODO: finish implementation of this case below +W0114 16:59:08.088044 754599 doftable.hpp:2587] TODO: finish implementation of this case below +W0114 16:59:10.681435 754599 doftable.hpp:2587] TODO: finish implementation of this case below + +---- + diff --git a/tmp/results/feelpp_app_io/ThermalBridgesENISO10211/gaya/2026_01_14T16_47_36/logs/be9a39af.adoc b/tmp/results/feelpp_app_io/ThermalBridgesENISO10211/gaya/2026_01_14T16_47_36/logs/be9a39af.adoc new file mode 100644 index 0000000..deac6be --- /dev/null +++ b/tmp/results/feelpp_app_io/ThermalBridgesENISO10211/gaya/2026_01_14T16_47_36/logs/be9a39af.adoc @@ -0,0 +1,238 @@ += ReFrame logs + +== ReFrame scheduler script + +[source,bash] +---- +#!/bin/bash +#SBATCH --job-name="rfm_RegressionTest_be9a39af" +#SBATCH --ntasks=32 +#SBATCH --ntasks-per-node=32 +#SBATCH --cpus-per-task=1 +#SBATCH --output=rfm_job.out +#SBATCH --error=rfm_job.err +#SBATCH --exclusive +#SBATCH --partition=public +#SBATCH --threads-per-core=1 +#SBATCH --time=0-00:15:00 +source /etc/profile.d/modules.sh +export PATH=/opt/apptainer/latest/bin/:$PATH +srun --cpus-per-task=1 apptainer exec -B"/data/home/cladellash/actions-runner/_work/apps-feelpp/apps-feelpp/reframe/stage/gaya/public/default/RegressionTest_be9a39af:/rfm_workdir" --home /data/scratch/cladellash/feelppdb --bind /data/scratch/cladellash/feelppdb/input_data/:/input_data --env OMP_NUM_THREADS=1 --sharens --bind /opt/:/opt/ --bind /data/:/data/ /data/scratch/cladellash/images//apps-feelpp.sif feelpp_app_io --directory /data/scratch/cladellash/feelppdb/app-feelpp-io/io/be9a39af/ThermalBridgesENISO10211 --discretization P1 --repository.append.np 0 --gmsh.filename /input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M3/case3_p32.json --nrun 1 + +---- + +== ReFrame error log + +[source,bash] +---- +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + + +---- + +== ReFrame output log + +[source,bash] +---- +[ Starting Feel++ ] application O version 0.111.0-preview.120 date 2026-Jan-14 +[feelpp] create Feel++ root repository: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/be9a39af/ThermalBridgesENISO10211 + +[feelpp] create Feel++ geo repository: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/be9a39af/ThermalBridgesENISO10211/geo + +[feelpp] create Feel++ expressions directory: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/be9a39af/ThermalBridgesENISO10211/exprs + +[feelpp] create Feel++ logs directory: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/be9a39af/ThermalBridgesENISO10211/logs + + . O files are stored in /data/scratch/cladellash/feelppdb/app-feelpp-io/io/be9a39af/ThermalBridgesENISO10211/ + .. logfiles :/data/scratch/cladellash/feelppdb/app-feelpp-io/io/be9a39af/ThermalBridgesENISO10211/logs +[loadMesh] Loading mesh in format json+h5: "/input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M3/case3_p32.json" +[loadMesh] Time : 56.4823s + [create function space] Time : 59.0093s + [create vectorial function space] Time : 97.4406s + [save field] Time : 0.368427s + [save vector field] Time : 0.812815s + [save mesh] Time : 10.5806s + [export time] Time : 76.1442s +Time load mesh 56.4823 +Time load create function space 59.0093 +Time load create vectorial function space 97.4406 +Time save mesh 10.5806 +Time save field 0.368427 +Time save vector field 0.812815 +Time to export 76.1442 ++----------------------------------------------------------------------------------------------------------------------------------------------------+ +| O | ++----------------------------------------------------------------------------------------------------------------------------------------------------+ +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | +| | logs | /data/scratch/cladellash/feelppdb/app-feelpp-io/io/be9a39af/ThermalBridgesENISO10211/logs | | +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | +| | journal | /data/scratch/cladellash/feelppdb/app-feelpp-io/io/be9a39af/ThermalBridgesENISO10211/journal.json | | +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | +| | directories | +------------------------------------------------------------------------------------------------------------------------------+ | | +| | | | /data/scratch/cladellash/feelppdb/app-feelpp-io/io/be9a39af/ThermalBridgesENISO10211/ | | | +| | | +------------------------------------------------------------------------------------------------------------------------------+ | | +| | | | /data/home/cladellash/actions-runner/_work/apps-feelpp/apps-feelpp/reframe/stage/gaya/public/default/RegressionTest_be9a39af | | | +| | | +------------------------------------------------------------------------------------------------------------------------------+ | | +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | ++----------------------------------------------------------------------------------------------------------------------------------------------------+ + +[ Stopping Feel++ ] application O execution time 381.581s + +---- + +== feelpp_app_io.INFO + +[source,bash] +---- +Log file created at: 2026/01/14 16:53:29 +Running on machine: gaya5 +Log line format: [IWEF]mmdd hh:mm:ss.uuuuuu threadid file:line] msg +I0114 16:53:29.537405 714545 environment.cpp:1708] File /input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M3/case3_p32.json found +I0114 16:53:29.539394 714545 loadmesh.hpp:246] Loading mesh in json+h5 format "/input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M3/case3_p32.json" +I0114 16:53:29.649868 714545 partitionio.hpp:1134] read stat points 11422621,367691,0 +I0114 16:53:29.649880 714545 partitionio.hpp:1137] read stat elements 67272407,2149333,0 +I0114 16:53:29.649883 714545 partitionio.hpp:1140] read stat ghost_elements 3285208,149504,0 +I0114 16:53:29.649884 714545 partitionio.hpp:1143] read stat marked_faces 1535876,43259,0 +I0114 16:53:29.649886 714545 partitionio.hpp:1146] read stat marked_edges 0,0,0 +I0114 16:53:29.649888 714545 partitionio.hpp:1149] read stat marked_points 0,0,0 +I0114 16:53:29.651010 714545 partitionio.hpp:1168] loaded points_ids:1x11422621 +I0114 16:53:29.652050 714545 partitionio.hpp:1170] loaded points_coords:1x34267863 +I0114 16:53:31.449139 714545 partitionio.hpp:1267] loaded elements:1x336362035 +I0114 16:53:40.132795 714545 partitionio.hpp:1373] loaded ghost_elements:1x3285208 +I0114 16:53:40.318110 714545 partitionio.hpp:1569] loaded marked_subentities:1x6143504 +I0114 16:53:42.480053 714545 meshimpl.hpp:1051] We have 43259 faces in the database +I0114 16:53:51.237825 714545 meshimpl.hpp:1325] We have now 4346866 faces in the mesh +I0114 16:54:18.303362 714545 meshimpl.hpp:1863] update boundary points... +I0114 16:54:18.609908 714545 meshimpl.hpp:1883] update boundary elements... +I0114 16:54:25.993064 714545 meshimpl.hpp:524] h average : 0.00818335 +I0114 16:54:25.993091 714545 meshimpl.hpp:525] h min : 0.00477946 +I0114 16:54:25.993094 714545 meshimpl.hpp:526] h max : 0.0116148 +I0114 16:54:26.043001 714545 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 16:54:26.831185 714545 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 16:54:26.831199 714545 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 16:54:26.851379 714545 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 1999829 on processor 0 +I0114 16:54:44.989545 714545 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 340636 +I0114 16:54:44.989632 714545 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 16:54:58.308200 714545 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 16:55:25.078014 714545 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 16:55:25.286056 714545 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 16:55:25.286074 714545 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 16:55:25.312582 714545 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 1999829 on processor 0 +I0114 16:55:53.853876 714545 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 1021908 +I0114 16:55:53.854332 714545 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 16:56:08.627153 714545 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 16:57:02.518934 714545 element_impl.hpp:199] creating element u : u +I0114 16:57:06.751653 714545 element_impl.hpp:199] creating element {x+y+z,x+y+z,x+y+z}:x:y:z : u +I0114 16:57:06.751830 714545 exporterimpl.hpp:219] [Exporter] format : ensightgold +I0114 16:57:06.751833 714545 exporterimpl.hpp:220] [Exporter] N : 1 +I0114 16:57:08.365630 714545 partitionio.hpp:319] writing mesh in HDF5 format in /data/scratch/cladellash/feelppdb/app-feelpp-io/io/be9a39af/ThermalBridgesENISO10211/mesh_0.h5 +I0114 16:57:18.568166 714545 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 16:57:18.891083 714545 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 16:57:18.891096 714545 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 16:57:18.925293 714545 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 1999829 on processor 0 +I0114 16:57:34.981887 714545 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 340636 +I0114 16:57:34.982034 714545 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 16:57:43.202121 714545 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 16:58:05.616122 714545 element_impl.hpp:199] creating element u : u +I0114 16:58:11.694984 714545 element_impl.hpp:199] creating element uV : u +I0114 16:58:11.695279 714545 element_impl.hpp:199] creating element uV : u +I0114 16:58:11.695566 714545 element_impl.hpp:199] creating element uV : u +I0114 16:58:11.760699 714545 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 16:58:11.956470 714545 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 16:58:11.956481 714545 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 16:58:11.990357 714545 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 1999829 on processor 0 +I0114 16:58:28.162755 714545 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 340636 +I0114 16:58:28.162842 714545 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 16:58:35.811553 714545 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 16:59:18.893958 714545 exporterensightgold_impl.hpp:1250] writing part 1 +I0114 16:59:21.097548 714545 exporterensightgold_impl.hpp:1250] writing part 2 +I0114 16:59:22.191181 714545 exporterensightgold_impl.hpp:1250] writing part 3 +I0114 16:59:22.233449 714545 exporterensightgold_impl.hpp:1250] writing part 4 +I0114 16:59:22.238623 714545 exporterensightgold_impl.hpp:1250] writing part 5 +I0114 16:59:22.251462 714545 exporterensightgold_impl.hpp:1250] writing part 6 +I0114 16:59:22.263249 714545 exporterensightgold_impl.hpp:1376] ExporterEnsightGold::writeVariableFiles Nodal: 2 +I0114 16:59:22.263254 714545 exporterensightgold_impl.hpp:1377] ExporterEnsightGold::writeVariableFiles Element: 0 +I0114 16:59:50.725106 714545 environment.cpp:2423] Environment::clearSomeMemory before: PETSC get current memory usage (resident memory): 1.26039e+07 KBytes 12603.9 MBytes 12.6039 GBytes +I0114 16:59:50.725148 714545 environment.cpp:2428] Environment::clearSomeMemory before: PETSC get current PETSC Malloc usage: 0 KBytes 0 MBytes 0 GBytes +I0114 16:59:50.725160 714545 environment.cpp:2430] Environment::clearSomeMemory before: PETSC get maximum PETSC Malloc usage(largest memory ever used so far): 0 KBytes 0 MBytes 0 GBytes +I0114 16:59:50.725193 714545 environment.cpp:2423] Environment::clearSomeMemory after: PETSC get current memory usage (resident memory): 1.26039e+07 KBytes 12603.9 MBytes 12.6039 GBytes +I0114 16:59:50.725198 714545 environment.cpp:2428] Environment::clearSomeMemory after: PETSC get current PETSC Malloc usage: 0 KBytes 0 MBytes 0 GBytes +I0114 16:59:50.725200 714545 environment.cpp:2430] Environment::clearSomeMemory after: PETSC get maximum PETSC Malloc usage(largest memory ever used so far): 0 KBytes 0 MBytes 0 GBytes + +---- +== feelpp_app_io.WARNING + +[source,bash] +---- +Log file created at: 2026/01/14 16:54:58 +Running on machine: gaya5 +Log line format: [IWEF]mmdd hh:mm:ss.uuuuuu threadid file:line] msg +W0114 16:54:58.308200 714545 doftable.hpp:2587] TODO: finish implementation of this case below +W0114 16:56:08.627153 714545 doftable.hpp:2587] TODO: finish implementation of this case below +W0114 16:57:43.202121 714545 doftable.hpp:2587] TODO: finish implementation of this case below +W0114 16:58:35.811553 714545 doftable.hpp:2587] TODO: finish implementation of this case below + +---- + diff --git a/tmp/results/feelpp_app_io/ThermalBridgesENISO10211/gaya/2026_01_14T16_47_36/logs/bea98e1d.adoc b/tmp/results/feelpp_app_io/ThermalBridgesENISO10211/gaya/2026_01_14T16_47_36/logs/bea98e1d.adoc new file mode 100644 index 0000000..6a4fae4 --- /dev/null +++ b/tmp/results/feelpp_app_io/ThermalBridgesENISO10211/gaya/2026_01_14T16_47_36/logs/bea98e1d.adoc @@ -0,0 +1,375 @@ += ReFrame logs + +== ReFrame scheduler script + +[source,bash] +---- +#!/bin/bash +#SBATCH --job-name="rfm_RegressionTest_bea98e1d" +#SBATCH --ntasks=128 +#SBATCH --ntasks-per-node=128 +#SBATCH --cpus-per-task=1 +#SBATCH --output=rfm_job.out +#SBATCH --error=rfm_job.err +#SBATCH --exclusive +#SBATCH --partition=public +#SBATCH --threads-per-core=1 +#SBATCH --time=0-00:15:00 +source /etc/profile.d/modules.sh +export PATH=/opt/apptainer/latest/bin/:$PATH +srun --cpus-per-task=1 apptainer exec -B"/data/home/cladellash/actions-runner/_work/apps-feelpp/apps-feelpp/reframe/stage/gaya/public/default/RegressionTest_bea98e1d:/rfm_workdir" --home /data/scratch/cladellash/feelppdb --bind /data/scratch/cladellash/feelppdb/input_data/:/input_data --env OMP_NUM_THREADS=1 --sharens --bind /opt/:/opt/ --bind /data/:/data/ /data/scratch/cladellash/images//apps-feelpp.sif feelpp_app_io --directory /data/scratch/cladellash/feelppdb/app-feelpp-io/io/bea98e1d/ThermalBridgesENISO10211 --discretization P2 --repository.append.np 0 --gmsh.filename /input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M3/case3_p128.json --nrun 1 + +---- + +== ReFrame error log + +[source,bash] +---- +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +srun: error: gaya6: task 54: Killed +slurmstepd-gaya6: error: mpi/pmix_v5: _errhandler: gaya6 [0]: pmixp_client_v2.c:211: Error handler invoked: status = -61, source = [slurm.pmix.32850.0:54] +srun: Job step aborted: Waiting up to 32 seconds for job step to finish. +slurmstepd-gaya6: error: *** STEP 32850.0 ON gaya6 CANCELLED AT 2026-01-14T16:52:42 *** +srun: error: gaya6: tasks 0-53,55-127: Killed + +---- + +== ReFrame output log + +[source,bash] +---- +[ Starting Feel++ ] application O version 0.111.0-preview.120 date 2026-Jan-14 +[feelpp] create Feel++ root repository: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/bea98e1d/ThermalBridgesENISO10211 + +[feelpp] create Feel++ geo repository: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/bea98e1d/ThermalBridgesENISO10211/geo + +[feelpp] create Feel++ expressions directory: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/bea98e1d/ThermalBridgesENISO10211/exprs + +[feelpp] create Feel++ logs directory: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/bea98e1d/ThermalBridgesENISO10211/logs + + . O files are stored in /data/scratch/cladellash/feelppdb/app-feelpp-io/io/bea98e1d/ThermalBridgesENISO10211/ + .. logfiles :/data/scratch/cladellash/feelppdb/app-feelpp-io/io/bea98e1d/ThermalBridgesENISO10211/logs +[loadMesh] Loading mesh in format json+h5: "/input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M3/case3_p128.json" + +---- + +== feelpp_app_io.INFO + +[source,bash] +---- +Log file created at: 2026/01/14 16:48:43 +Running on machine: gaya6 +Log line format: [IWEF]mmdd hh:mm:ss.uuuuuu threadid file:line] msg +I0114 16:48:43.498643 709965 environment.cpp:1708] File /input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M3/case3_p128.json found +I0114 16:48:43.500823 709965 loadmesh.hpp:246] Loading mesh in json+h5 format "/input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M3/case3_p128.json" +I0114 16:48:43.653271 709965 partitionio.hpp:1134] read stat points 12442028,96083,0 +I0114 16:48:43.653280 709965 partitionio.hpp:1137] read stat elements 71170451,549476,0 +I0114 16:48:43.653285 709965 partitionio.hpp:1140] read stat ghost_elements 7183252,49478,0 +I0114 16:48:43.653286 709965 partitionio.hpp:1143] read stat marked_faces 1595113,14654,0 +I0114 16:48:43.653290 709965 partitionio.hpp:1146] read stat marked_edges 0,0,0 +I0114 16:48:43.653291 709965 partitionio.hpp:1149] read stat marked_points 0,0,0 +I0114 16:48:43.656541 709965 partitionio.hpp:1168] loaded points_ids:1x12442028 +I0114 16:48:43.659307 709965 partitionio.hpp:1170] loaded points_coords:1x37326084 +I0114 16:48:44.599782 709965 partitionio.hpp:1267] loaded elements:1x355852255 +I0114 16:48:50.619206 709965 partitionio.hpp:1373] loaded ghost_elements:1x7183252 +I0114 16:48:50.685528 709965 partitionio.hpp:1569] loaded marked_subentities:1x6380452 +I0114 16:48:51.449252 709965 meshimpl.hpp:1051] We have 14654 faces in the database +I0114 16:48:53.955631 709965 meshimpl.hpp:1325] We have now 1115059 faces in the mesh +I0114 16:49:02.474813 709965 meshimpl.hpp:1863] update boundary points... +I0114 16:49:02.580592 709965 meshimpl.hpp:1883] update boundary elements... +I0114 16:49:05.562103 709965 meshimpl.hpp:524] h average : 0.00818335 +I0114 16:49:05.562183 709965 meshimpl.hpp:525] h min : 0.00477946 +I0114 16:49:05.562186 709965 meshimpl.hpp:526] h max : 0.0116148 +I0114 16:49:05.645780 709965 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 16:49:05.837132 709965 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 16:49:05.837157 709965 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 16:49:05.845764 709965 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 499998 on processor 0 +I0114 16:49:15.483804 709965 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 688525 +I0114 16:49:15.484378 709965 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 16:49:21.230432 709965 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 16:49:34.736630 709965 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 16:49:34.813236 709965 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 16:49:34.813251 709965 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 16:49:34.820714 709965 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 499998 on processor 0 +I0114 16:49:50.890120 709965 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 2065575 +I0114 16:49:50.890690 709965 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 16:50:01.619917 709965 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 16:50:30.698284 709965 element_impl.hpp:199] creating element u : u +I0114 16:50:35.937455 709965 element_impl.hpp:199] creating element {x+y+z,x+y+z,x+y+z}:x:y:z : u +I0114 16:50:35.938522 709965 exporterimpl.hpp:219] [Exporter] format : ensightgold +I0114 16:50:35.938527 709965 exporterimpl.hpp:220] [Exporter] N : 1 +I0114 16:50:46.384927 709965 partitionio.hpp:319] writing mesh in HDF5 format in /data/scratch/cladellash/feelppdb/app-feelpp-io/io/bea98e1d/ThermalBridgesENISO10211/mesh_0.h5 +I0114 16:50:58.442461 709965 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 16:50:58.632978 709965 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 16:50:58.632992 709965 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 16:50:58.639994 709965 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 499998 on processor 0 +I0114 16:51:16.677440 709965 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 87082 + +---- +== feelpp_app_io.WARNING + +[source,bash] +---- +Log file created at: 2026/01/14 16:49:21 +Running on machine: gaya6 +Log line format: [IWEF]mmdd hh:mm:ss.uuuuuu threadid file:line] msg +W0114 16:49:21.230432 709965 doftable.hpp:2587] TODO: finish implementation of this case below +W0114 16:50:01.619917 709965 doftable.hpp:2587] TODO: finish implementation of this case below + +---- + diff --git a/tmp/results/feelpp_app_io/ThermalBridgesENISO10211/gaya/2026_01_14T16_47_36/logs/c265819d.adoc b/tmp/results/feelpp_app_io/ThermalBridgesENISO10211/gaya/2026_01_14T16_47_36/logs/c265819d.adoc new file mode 100644 index 0000000..13360b1 --- /dev/null +++ b/tmp/results/feelpp_app_io/ThermalBridgesENISO10211/gaya/2026_01_14T16_47_36/logs/c265819d.adoc @@ -0,0 +1,430 @@ += ReFrame logs + +== ReFrame scheduler script + +[source,bash] +---- +#!/bin/bash +#SBATCH --job-name="rfm_RegressionTest_c265819d" +#SBATCH --ntasks=128 +#SBATCH --ntasks-per-node=128 +#SBATCH --cpus-per-task=1 +#SBATCH --output=rfm_job.out +#SBATCH --error=rfm_job.err +#SBATCH --exclusive +#SBATCH --partition=public +#SBATCH --threads-per-core=1 +#SBATCH --time=0-00:15:00 +source /etc/profile.d/modules.sh +export PATH=/opt/apptainer/latest/bin/:$PATH +srun --cpus-per-task=1 apptainer exec -B"/data/home/cladellash/actions-runner/_work/apps-feelpp/apps-feelpp/reframe/stage/gaya/public/default/RegressionTest_c265819d:/rfm_workdir" --home /data/scratch/cladellash/feelppdb --bind /data/scratch/cladellash/feelppdb/input_data/:/input_data --env OMP_NUM_THREADS=1 --sharens --bind /opt/:/opt/ --bind /data/:/data/ /data/scratch/cladellash/images//apps-feelpp.sif feelpp_app_io --directory /data/scratch/cladellash/feelppdb/app-feelpp-io/io/c265819d/ThermalBridgesENISO10211 --discretization P1 --repository.append.np 0 --gmsh.filename /input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M1/case3_p128.json --nrun 1 + +---- + +== ReFrame error log + +[source,bash] +---- +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + + +---- + +== ReFrame output log + +[source,bash] +---- +[ Starting Feel++ ] application O version 0.111.0-preview.120 date 2026-Jan-14 +[feelpp] create Feel++ root repository: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/c265819d/ThermalBridgesENISO10211 + +[feelpp] create Feel++ geo repository: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/c265819d/ThermalBridgesENISO10211/geo + +[feelpp] create Feel++ expressions directory: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/c265819d/ThermalBridgesENISO10211/exprs + +[feelpp] create Feel++ logs directory: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/c265819d/ThermalBridgesENISO10211/logs + + . O files are stored in /data/scratch/cladellash/feelppdb/app-feelpp-io/io/c265819d/ThermalBridgesENISO10211/ + .. logfiles :/data/scratch/cladellash/feelppdb/app-feelpp-io/io/c265819d/ThermalBridgesENISO10211/logs +[loadMesh] Loading mesh in format json+h5: "/input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M1/case3_p128.json" +[loadMesh] Time : 0.796183s + [create function space] Time : 0.139573s + [create vectorial function space] Time : 0.253406s + [save field] Time : 0.240021s + [save vector field] Time : 0.246858s + [save mesh] Time : 1.08915s + [export time] Time : 3.08192s +Time load mesh 0.796183 +Time load create function space 0.139573 +Time load create vectorial function space 0.253406 +Time save mesh 1.08915 +Time save field 0.240021 +Time save vector field 0.246858 +Time to export 3.08192 ++----------------------------------------------------------------------------------------------------------------------------------------------------+ +| O | ++----------------------------------------------------------------------------------------------------------------------------------------------------+ +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | +| | logs | /data/scratch/cladellash/feelppdb/app-feelpp-io/io/c265819d/ThermalBridgesENISO10211/logs | | +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | +| | journal | /data/scratch/cladellash/feelppdb/app-feelpp-io/io/c265819d/ThermalBridgesENISO10211/journal.json | | +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | +| | directories | +------------------------------------------------------------------------------------------------------------------------------+ | | +| | | | /data/scratch/cladellash/feelppdb/app-feelpp-io/io/c265819d/ThermalBridgesENISO10211/ | | | +| | | +------------------------------------------------------------------------------------------------------------------------------+ | | +| | | | /data/home/cladellash/actions-runner/_work/apps-feelpp/apps-feelpp/reframe/stage/gaya/public/default/RegressionTest_c265819d | | | +| | | +------------------------------------------------------------------------------------------------------------------------------+ | | +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | ++----------------------------------------------------------------------------------------------------------------------------------------------------+ + +[ Stopping Feel++ ] application O execution time 7.71971s + +---- + +== feelpp_app_io.INFO + +[source,bash] +---- +Log file created at: 2026/01/14 16:47:48 +Running on machine: gaya5 +Log line format: [IWEF]mmdd hh:mm:ss.uuuuuu threadid file:line] msg +I0114 16:47:48.775071 702507 environment.cpp:1708] File /input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M1/case3_p128.json found +I0114 16:47:48.781839 702507 loadmesh.hpp:246] Loading mesh in json+h5 format "/input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M1/case3_p128.json" +I0114 16:47:48.967118 702507 partitionio.hpp:1134] read stat points 327433,2761,0 +I0114 16:47:48.967133 702507 partitionio.hpp:1137] read stat elements 1525153,12663,0 +I0114 16:47:48.967136 702507 partitionio.hpp:1140] read stat ghost_elements 466661,4435,0 +I0114 16:47:48.967139 702507 partitionio.hpp:1143] read stat marked_faces 122471,815,0 +I0114 16:47:48.967140 702507 partitionio.hpp:1146] read stat marked_edges 0,0,0 +I0114 16:47:48.967142 702507 partitionio.hpp:1149] read stat marked_points 0,0,0 +I0114 16:47:48.967998 702507 partitionio.hpp:1168] loaded points_ids:1x327433 +I0114 16:47:48.968354 702507 partitionio.hpp:1170] loaded points_coords:1x982299 +I0114 16:47:49.034803 702507 partitionio.hpp:1267] loaded elements:1x7625765 +I0114 16:47:49.132673 702507 partitionio.hpp:1373] loaded ghost_elements:1x466661 +I0114 16:47:49.143035 702507 partitionio.hpp:1569] loaded marked_subentities:1x489884 +I0114 16:47:49.191203 702507 meshimpl.hpp:1051] We have 815 faces in the database +I0114 16:47:49.215224 702507 meshimpl.hpp:1325] We have now 26620 faces in the mesh +I0114 16:47:49.424299 702507 meshimpl.hpp:1863] update boundary points... +I0114 16:47:49.428720 702507 meshimpl.hpp:1883] update boundary elements... +I0114 16:47:49.520967 702507 meshimpl.hpp:524] h average : 0.0325846 +I0114 16:47:49.520991 702507 meshimpl.hpp:525] h min : 0.0175455 +I0114 16:47:49.520994 702507 meshimpl.hpp:526] h max : 0.044348 +I0114 16:47:49.527791 702507 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 16:47:49.530714 702507 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 16:47:49.530719 702507 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 16:47:49.530797 702507 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 8228 on processor 0 +I0114 16:47:49.548906 702507 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 1811 +I0114 16:47:49.548942 702507 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 16:47:49.618417 702507 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 16:47:49.667888 702507 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 16:47:49.669145 702507 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 16:47:49.669149 702507 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 16:47:49.669256 702507 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 8228 on processor 0 +I0114 16:47:49.703977 702507 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 5433 +I0114 16:47:49.704007 702507 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 16:47:49.811452 702507 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 16:47:49.921334 702507 element_impl.hpp:199] creating element u : u +I0114 16:47:49.947178 702507 element_impl.hpp:199] creating element {x+y+z,x+y+z,x+y+z}:x:y:z : u +I0114 16:47:49.947216 702507 exporterimpl.hpp:219] [Exporter] format : ensightgold +I0114 16:47:49.947219 702507 exporterimpl.hpp:220] [Exporter] N : 1 +I0114 16:47:50.439970 702507 partitionio.hpp:319] writing mesh in HDF5 format in /data/scratch/cladellash/feelppdb/app-feelpp-io/io/c265819d/ThermalBridgesENISO10211/mesh_0.h5 +I0114 16:47:51.526764 702507 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 16:47:51.528136 702507 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 16:47:51.528141 702507 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 16:47:51.528250 702507 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 8228 on processor 0 +I0114 16:47:51.542263 702507 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 1811 +I0114 16:47:51.542289 702507 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 16:47:51.595585 702507 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 16:47:51.631731 702507 element_impl.hpp:199] creating element u : u +I0114 16:47:51.653376 702507 element_impl.hpp:199] creating element uV : u +I0114 16:47:51.653389 702507 element_impl.hpp:199] creating element uV : u +I0114 16:47:51.653393 702507 element_impl.hpp:199] creating element uV : u +I0114 16:47:51.653910 702507 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 16:47:51.654913 702507 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 16:47:51.654917 702507 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 16:47:51.655012 702507 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 8228 on processor 0 +I0114 16:47:51.669386 702507 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 1811 +I0114 16:47:51.669410 702507 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 16:47:51.714219 702507 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 16:47:52.142272 702507 exporterensightgold_impl.hpp:1250] writing part 1 +I0114 16:47:53.168226 702507 exporterensightgold_impl.hpp:1250] writing part 2 +I0114 16:47:53.271992 702507 exporterensightgold_impl.hpp:1250] writing part 3 +I0114 16:47:53.288472 702507 exporterensightgold_impl.hpp:1250] writing part 4 +I0114 16:47:53.297174 702507 exporterensightgold_impl.hpp:1250] writing part 5 +I0114 16:47:53.304415 702507 exporterensightgold_impl.hpp:1250] writing part 6 +I0114 16:47:53.310797 702507 exporterensightgold_impl.hpp:1376] ExporterEnsightGold::writeVariableFiles Nodal: 2 +I0114 16:47:53.310806 702507 exporterensightgold_impl.hpp:1377] ExporterEnsightGold::writeVariableFiles Element: 0 +I0114 16:47:54.859059 702507 environment.cpp:2423] Environment::clearSomeMemory before: PETSC get current memory usage (resident memory): 654311 KBytes 654.311 MBytes 0.654311 GBytes +I0114 16:47:54.859076 702507 environment.cpp:2428] Environment::clearSomeMemory before: PETSC get current PETSC Malloc usage: 0 KBytes 0 MBytes 0 GBytes +I0114 16:47:54.859082 702507 environment.cpp:2430] Environment::clearSomeMemory before: PETSC get maximum PETSC Malloc usage(largest memory ever used so far): 0 KBytes 0 MBytes 0 GBytes +I0114 16:47:54.859221 702507 environment.cpp:2423] Environment::clearSomeMemory after: PETSC get current memory usage (resident memory): 654311 KBytes 654.311 MBytes 0.654311 GBytes +I0114 16:47:54.859228 702507 environment.cpp:2428] Environment::clearSomeMemory after: PETSC get current PETSC Malloc usage: 0 KBytes 0 MBytes 0 GBytes +I0114 16:47:54.859231 702507 environment.cpp:2430] Environment::clearSomeMemory after: PETSC get maximum PETSC Malloc usage(largest memory ever used so far): 0 KBytes 0 MBytes 0 GBytes + +---- +== feelpp_app_io.WARNING + +[source,bash] +---- +Log file created at: 2026/01/14 16:47:49 +Running on machine: gaya5 +Log line format: [IWEF]mmdd hh:mm:ss.uuuuuu threadid file:line] msg +W0114 16:47:49.618417 702507 doftable.hpp:2587] TODO: finish implementation of this case below +W0114 16:47:49.811452 702507 doftable.hpp:2587] TODO: finish implementation of this case below +W0114 16:47:51.595585 702507 doftable.hpp:2587] TODO: finish implementation of this case below +W0114 16:47:51.714219 702507 doftable.hpp:2587] TODO: finish implementation of this case below + +---- + diff --git a/tmp/results/feelpp_app_io/ThermalBridgesENISO10211/gaya/2026_01_14T16_47_36/logs/c54af874.adoc b/tmp/results/feelpp_app_io/ThermalBridgesENISO10211/gaya/2026_01_14T16_47_36/logs/c54af874.adoc new file mode 100644 index 0000000..a56e1e7 --- /dev/null +++ b/tmp/results/feelpp_app_io/ThermalBridgesENISO10211/gaya/2026_01_14T16_47_36/logs/c54af874.adoc @@ -0,0 +1,190 @@ += ReFrame logs + +== ReFrame scheduler script + +[source,bash] +---- +#!/bin/bash +#SBATCH --job-name="rfm_RegressionTest_c54af874" +#SBATCH --ntasks=32 +#SBATCH --ntasks-per-node=32 +#SBATCH --cpus-per-task=1 +#SBATCH --output=rfm_job.out +#SBATCH --error=rfm_job.err +#SBATCH --exclusive +#SBATCH --partition=public +#SBATCH --threads-per-core=1 +#SBATCH --time=0-00:15:00 +source /etc/profile.d/modules.sh +export PATH=/opt/apptainer/latest/bin/:$PATH +srun --cpus-per-task=1 apptainer exec -B"/data/home/cladellash/actions-runner/_work/apps-feelpp/apps-feelpp/reframe/stage/gaya/public/default/RegressionTest_c54af874:/rfm_workdir" --home /data/scratch/cladellash/feelppdb --bind /data/scratch/cladellash/feelppdb/input_data/:/input_data --env OMP_NUM_THREADS=1 --sharens --bind /opt/:/opt/ --bind /data/:/data/ /data/scratch/cladellash/images//apps-feelpp.sif feelpp_app_io --directory /data/scratch/cladellash/feelppdb/app-feelpp-io/io/c54af874/ThermalBridgesENISO10211 --discretization P2 --repository.append.np 0 --gmsh.filename /input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M3/case3_p32.json --nrun 1 + +---- + +== ReFrame error log + +[source,bash] +---- +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +srun: Job step aborted: Waiting up to 32 seconds for job step to finish. +slurmstepd-gaya6: error: *** JOB 32864 ON gaya6 CANCELLED AT 2026-01-14T17:09:33 DUE TO TIME LIMIT *** +slurmstepd-gaya6: error: *** STEP 32864.0 ON gaya6 CANCELLED AT 2026-01-14T17:09:34 DUE TO TIME LIMIT *** +srun: error: gaya6: tasks 0-16,18-31: Terminated +srun: got SIGCONT +srun: forcing job termination +slurmstepd-gaya6: error: mpi/pmix_v5: _errhandler: gaya6 [0]: pmixp_client_v2.c:211: Error handler invoked: status = -61, source = [slurm.pmix.32864.0:17] +srun: error: gaya6: task 17: Exited with exit code 143 + +---- + +== ReFrame output log + +[source,bash] +---- +[ Starting Feel++ ] application O version 0.111.0-preview.120 date 2026-Jan-14 +[feelpp] create Feel++ root repository: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/c54af874/ThermalBridgesENISO10211 + +[feelpp] create Feel++ geo repository: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/c54af874/ThermalBridgesENISO10211/geo + +[feelpp] create Feel++ expressions directory: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/c54af874/ThermalBridgesENISO10211/exprs + +[feelpp] create Feel++ logs directory: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/c54af874/ThermalBridgesENISO10211/logs + + . O files are stored in /data/scratch/cladellash/feelppdb/app-feelpp-io/io/c54af874/ThermalBridgesENISO10211/ + .. logfiles :/data/scratch/cladellash/feelppdb/app-feelpp-io/io/c54af874/ThermalBridgesENISO10211/logs +[loadMesh] Loading mesh in format json+h5: "/input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M3/case3_p32.json" + +---- + +== feelpp_app_io.INFO + +[source,bash] +---- +Log file created at: 2026/01/14 16:54:10 +Running on machine: gaya6 +Log line format: [IWEF]mmdd hh:mm:ss.uuuuuu threadid file:line] msg +I0114 16:54:10.064342 714433 environment.cpp:1708] File /input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M3/case3_p32.json found +I0114 16:54:10.065907 714433 loadmesh.hpp:246] Loading mesh in json+h5 format "/input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M3/case3_p32.json" +I0114 16:54:10.127756 714433 partitionio.hpp:1134] read stat points 11422621,367691,0 +I0114 16:54:10.127768 714433 partitionio.hpp:1137] read stat elements 67272407,2149333,0 +I0114 16:54:10.127770 714433 partitionio.hpp:1140] read stat ghost_elements 3285208,149504,0 +I0114 16:54:10.127772 714433 partitionio.hpp:1143] read stat marked_faces 1535876,43259,0 +I0114 16:54:10.127774 714433 partitionio.hpp:1146] read stat marked_edges 0,0,0 +I0114 16:54:10.127775 714433 partitionio.hpp:1149] read stat marked_points 0,0,0 +I0114 16:54:10.129201 714433 partitionio.hpp:1168] loaded points_ids:1x11422621 +I0114 16:54:10.130268 714433 partitionio.hpp:1170] loaded points_coords:1x34267863 +I0114 16:54:11.461561 714433 partitionio.hpp:1267] loaded elements:1x336362035 +I0114 16:54:18.888415 714433 partitionio.hpp:1373] loaded ghost_elements:1x3285208 +I0114 16:54:18.977218 714433 partitionio.hpp:1569] loaded marked_subentities:1x6143504 +I0114 16:54:21.155170 714433 meshimpl.hpp:1051] We have 43259 faces in the database +I0114 16:54:30.232689 714433 meshimpl.hpp:1325] We have now 4346866 faces in the mesh +I0114 16:54:57.247464 714433 meshimpl.hpp:1863] update boundary points... +I0114 16:54:57.548561 714433 meshimpl.hpp:1883] update boundary elements... +I0114 16:55:05.429904 714433 meshimpl.hpp:524] h average : 0.00818335 +I0114 16:55:05.429989 714433 meshimpl.hpp:525] h min : 0.00477946 +I0114 16:55:05.429992 714433 meshimpl.hpp:526] h max : 0.0116148 +I0114 16:55:05.487809 714433 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 16:55:06.348264 714433 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 16:55:06.348280 714433 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 16:55:06.366596 714433 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 1999829 on processor 0 +I0114 16:55:47.568991 714433 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 2724247 +I0114 16:55:47.569640 714433 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 16:56:06.614879 714433 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 16:57:00.262717 714433 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 16:57:00.521847 714433 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 16:57:00.521874 714433 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 16:57:00.548483 714433 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 1999829 on processor 0 +I0114 16:58:08.000008 714433 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 8172741 +I0114 16:58:08.000546 714433 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 16:58:38.859546 714433 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 17:00:30.516157 714433 element_impl.hpp:199] creating element u : u +I0114 17:00:41.394728 714433 element_impl.hpp:199] creating element {x+y+z,x+y+z,x+y+z}:x:y:z : u +I0114 17:00:41.398895 714433 exporterimpl.hpp:219] [Exporter] format : ensightgold +I0114 17:00:41.398900 714433 exporterimpl.hpp:220] [Exporter] N : 1 +I0114 17:00:51.281700 714433 partitionio.hpp:319] writing mesh in HDF5 format in /data/scratch/cladellash/feelppdb/app-feelpp-io/io/c54af874/ThermalBridgesENISO10211/mesh_0.h5 +I0114 17:01:02.242036 714433 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 17:01:02.754021 714433 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 17:01:02.754052 714433 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 17:01:02.776213 714433 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 1999829 on processor 0 +I0114 17:01:19.177124 714433 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 340636 +I0114 17:01:19.177186 714433 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 17:01:26.847146 714433 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 17:01:51.138299 714433 element_impl.hpp:199] creating element u : u + +---- +== feelpp_app_io.WARNING + +[source,bash] +---- +Log file created at: 2026/01/14 16:56:06 +Running on machine: gaya6 +Log line format: [IWEF]mmdd hh:mm:ss.uuuuuu threadid file:line] msg +W0114 16:56:06.614879 714433 doftable.hpp:2587] TODO: finish implementation of this case below +W0114 16:58:38.859546 714433 doftable.hpp:2587] TODO: finish implementation of this case below +W0114 17:01:26.847146 714433 doftable.hpp:2587] TODO: finish implementation of this case below + +---- + diff --git a/tmp/results/feelpp_app_io/ThermalBridgesENISO10211/gaya/2026_01_14T16_47_36/logs/d29ebad1.adoc b/tmp/results/feelpp_app_io/ThermalBridgesENISO10211/gaya/2026_01_14T16_47_36/logs/d29ebad1.adoc new file mode 100644 index 0000000..0f1d17f --- /dev/null +++ b/tmp/results/feelpp_app_io/ThermalBridgesENISO10211/gaya/2026_01_14T16_47_36/logs/d29ebad1.adoc @@ -0,0 +1,206 @@ += ReFrame logs + +== ReFrame scheduler script + +[source,bash] +---- +#!/bin/bash +#SBATCH --job-name="rfm_RegressionTest_d29ebad1" +#SBATCH --ntasks=16 +#SBATCH --ntasks-per-node=16 +#SBATCH --cpus-per-task=1 +#SBATCH --output=rfm_job.out +#SBATCH --error=rfm_job.err +#SBATCH --exclusive +#SBATCH --partition=public +#SBATCH --threads-per-core=1 +#SBATCH --time=0-00:15:00 +source /etc/profile.d/modules.sh +export PATH=/opt/apptainer/latest/bin/:$PATH +srun --cpus-per-task=1 apptainer exec -B"/data/home/cladellash/actions-runner/_work/apps-feelpp/apps-feelpp/reframe/stage/gaya/public/default/RegressionTest_d29ebad1:/rfm_workdir" --home /data/scratch/cladellash/feelppdb --bind /data/scratch/cladellash/feelppdb/input_data/:/input_data --env OMP_NUM_THREADS=1 --sharens --bind /opt/:/opt/ --bind /data/:/data/ /data/scratch/cladellash/images//apps-feelpp.sif feelpp_app_io --directory /data/scratch/cladellash/feelppdb/app-feelpp-io/io/d29ebad1/ThermalBridgesENISO10211 --discretization P2 --repository.append.np 0 --gmsh.filename /input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M1/case3_p16.json --nrun 1 + +---- + +== ReFrame error log + +[source,bash] +---- +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + + +---- + +== ReFrame output log + +[source,bash] +---- +[ Starting Feel++ ] application O version 0.111.0-preview.120 date 2026-Jan-14 +[feelpp] create Feel++ root repository: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/d29ebad1/ThermalBridgesENISO10211 + +[feelpp] create Feel++ geo repository: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/d29ebad1/ThermalBridgesENISO10211/geo + +[feelpp] create Feel++ expressions directory: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/d29ebad1/ThermalBridgesENISO10211/exprs + +[feelpp] create Feel++ logs directory: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/d29ebad1/ThermalBridgesENISO10211/logs + + . O files are stored in /data/scratch/cladellash/feelppdb/app-feelpp-io/io/d29ebad1/ThermalBridgesENISO10211/ + .. logfiles :/data/scratch/cladellash/feelppdb/app-feelpp-io/io/d29ebad1/ThermalBridgesENISO10211/logs +[loadMesh] Loading mesh in format json+h5: "/input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M1/case3_p16.json" +[loadMesh] Time : 1.38366s + [create function space] Time : 2.04216s + [create vectorial function space] Time : 4.40384s + [save field] Time : 0.0812255s + [save vector field] Time : 0.155401s + [save mesh] Time : 0.29236s + [export time] Time : 2.97325s +Time load mesh 1.38366 +Time load create function space 2.04216 +Time load create vectorial function space 4.40384 +Time save mesh 0.29236 +Time save field 0.0812255 +Time save vector field 0.155401 +Time to export 2.97325 ++----------------------------------------------------------------------------------------------------------------------------------------------------+ +| O | ++----------------------------------------------------------------------------------------------------------------------------------------------------+ +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | +| | logs | /data/scratch/cladellash/feelppdb/app-feelpp-io/io/d29ebad1/ThermalBridgesENISO10211/logs | | +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | +| | journal | /data/scratch/cladellash/feelppdb/app-feelpp-io/io/d29ebad1/ThermalBridgesENISO10211/journal.json | | +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | +| | directories | +------------------------------------------------------------------------------------------------------------------------------+ | | +| | | | /data/scratch/cladellash/feelppdb/app-feelpp-io/io/d29ebad1/ThermalBridgesENISO10211/ | | | +| | | +------------------------------------------------------------------------------------------------------------------------------+ | | +| | | | /data/home/cladellash/actions-runner/_work/apps-feelpp/apps-feelpp/reframe/stage/gaya/public/default/RegressionTest_d29ebad1 | | | +| | | +------------------------------------------------------------------------------------------------------------------------------+ | | +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | ++----------------------------------------------------------------------------------------------------------------------------------------------------+ + +[ Stopping Feel++ ] application O execution time 13.7353s + +---- + +== feelpp_app_io.INFO + +[source,bash] +---- +Log file created at: 2026/01/14 16:48:59 +Running on machine: gaya1 +Log line format: [IWEF]mmdd hh:mm:ss.uuuuuu threadid file:line] msg +I0114 16:48:59.509667 937972 environment.cpp:1708] File /input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M1/case3_p16.json found +I0114 16:48:59.511246 937972 loadmesh.hpp:246] Loading mesh in json+h5 format "/input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M1/case3_p16.json" +I0114 16:48:59.548866 937972 partitionio.hpp:1134] read stat points 232151,14615,0 +I0114 16:48:59.548879 937972 partitionio.hpp:1137] read stat elements 1195712,76833,0 +I0114 16:48:59.548882 937972 partitionio.hpp:1140] read stat ghost_elements 137220,11039,0 +I0114 16:48:59.548883 937972 partitionio.hpp:1143] read stat marked_faces 94934,4783,0 +I0114 16:48:59.548885 937972 partitionio.hpp:1146] read stat marked_edges 0,0,0 +I0114 16:48:59.548887 937972 partitionio.hpp:1149] read stat marked_points 0,0,0 +I0114 16:48:59.549376 937972 partitionio.hpp:1168] loaded points_ids:1x232151 +I0114 16:48:59.549908 937972 partitionio.hpp:1170] loaded points_coords:1x696453 +I0114 16:48:59.562165 937972 partitionio.hpp:1267] loaded elements:1x5978560 +I0114 16:48:59.635211 937972 partitionio.hpp:1373] loaded ghost_elements:1x137220 +I0114 16:48:59.641325 937972 partitionio.hpp:1569] loaded marked_subentities:1x379736 +I0114 16:48:59.694028 937972 meshimpl.hpp:1051] We have 4783 faces in the database +I0114 16:48:59.928169 937972 meshimpl.hpp:1325] We have now 158076 faces in the mesh +I0114 16:49:00.637441 937972 meshimpl.hpp:1863] update boundary points... +I0114 16:49:00.648288 937972 meshimpl.hpp:1883] update boundary elements... +I0114 16:49:00.867053 937972 meshimpl.hpp:524] h average : 0.0325846 +I0114 16:49:00.867125 937972 meshimpl.hpp:525] h min : 0.0175455 +I0114 16:49:00.867128 937972 meshimpl.hpp:526] h max : 0.044348 +I0114 16:49:00.877271 937972 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 16:49:00.893677 937972 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 16:49:00.893688 937972 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 16:49:00.894601 937972 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 65794 on processor 0 +I0114 16:49:01.598629 937972 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 94421 +I0114 16:49:01.598757 937972 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 16:49:02.025343 937972 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 16:49:02.920965 937972 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 16:49:02.928004 937972 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 16:49:02.928010 937972 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 16:49:02.928892 937972 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 65794 on processor 0 +I0114 16:49:04.183701 937972 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 283263 +I0114 16:49:04.183784 937972 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 16:49:04.959277 937972 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 16:49:07.324959 937972 element_impl.hpp:199] creating element u : u +I0114 16:49:07.553501 937972 element_impl.hpp:199] creating element {x+y+z,x+y+z,x+y+z}:x:y:z : u +I0114 16:49:07.553591 937972 exporterimpl.hpp:219] [Exporter] format : ensightgold +I0114 16:49:07.553593 937972 exporterimpl.hpp:220] [Exporter] N : 1 +I0114 16:49:07.817484 937972 partitionio.hpp:319] writing mesh in HDF5 format in /data/scratch/cladellash/feelppdb/app-feelpp-io/io/d29ebad1/ThermalBridgesENISO10211/mesh_0.h5 +I0114 16:49:08.087930 937972 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 16:49:08.101590 937972 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 16:49:08.101599 937972 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 16:49:08.102264 937972 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 65794 on processor 0 +I0114 16:49:08.278445 937972 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 12449 +I0114 16:49:08.278477 937972 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 16:49:08.473210 937972 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 16:49:08.733846 937972 element_impl.hpp:199] creating element u : u +I0114 16:49:08.925431 937972 element_impl.hpp:199] creating element uV : u +I0114 16:49:08.925463 937972 element_impl.hpp:199] creating element uV : u +I0114 16:49:08.925473 937972 element_impl.hpp:199] creating element uV : u +I0114 16:49:08.927939 937972 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 16:49:08.943225 937972 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 16:49:08.943251 937972 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 16:49:08.955718 937972 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 65794 on processor 0 +I0114 16:49:09.586673 937972 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 94421 +I0114 16:49:09.586710 937972 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 16:49:10.011543 937972 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 16:49:11.390616 937972 exporterensightgold_impl.hpp:1250] writing part 1 +I0114 16:49:11.499483 937972 exporterensightgold_impl.hpp:1250] writing part 2 +I0114 16:49:11.546227 937972 exporterensightgold_impl.hpp:1250] writing part 3 +I0114 16:49:11.577770 937972 exporterensightgold_impl.hpp:1250] writing part 4 +I0114 16:49:11.608755 937972 exporterensightgold_impl.hpp:1250] writing part 5 +I0114 16:49:11.624192 937972 exporterensightgold_impl.hpp:1250] writing part 6 +I0114 16:49:11.632386 937972 exporterensightgold_impl.hpp:1376] ExporterEnsightGold::writeVariableFiles Nodal: 2 +I0114 16:49:11.632392 937972 exporterensightgold_impl.hpp:1377] ExporterEnsightGold::writeVariableFiles Element: 0 +I0114 16:49:12.932235 937972 environment.cpp:2423] Environment::clearSomeMemory before: PETSC get current memory usage (resident memory): 836764 KBytes 836.764 MBytes 0.836764 GBytes +I0114 16:49:12.932250 937972 environment.cpp:2428] Environment::clearSomeMemory before: PETSC get current PETSC Malloc usage: 0 KBytes 0 MBytes 0 GBytes +I0114 16:49:12.932256 937972 environment.cpp:2430] Environment::clearSomeMemory before: PETSC get maximum PETSC Malloc usage(largest memory ever used so far): 0 KBytes 0 MBytes 0 GBytes +I0114 16:49:12.932435 937972 environment.cpp:2423] Environment::clearSomeMemory after: PETSC get current memory usage (resident memory): 836764 KBytes 836.764 MBytes 0.836764 GBytes +I0114 16:49:12.932440 937972 environment.cpp:2428] Environment::clearSomeMemory after: PETSC get current PETSC Malloc usage: 0 KBytes 0 MBytes 0 GBytes +I0114 16:49:12.932443 937972 environment.cpp:2430] Environment::clearSomeMemory after: PETSC get maximum PETSC Malloc usage(largest memory ever used so far): 0 KBytes 0 MBytes 0 GBytes + +---- +== feelpp_app_io.WARNING + +[source,bash] +---- +Log file created at: 2026/01/14 16:49:02 +Running on machine: gaya1 +Log line format: [IWEF]mmdd hh:mm:ss.uuuuuu threadid file:line] msg +W0114 16:49:02.025343 937972 doftable.hpp:2587] TODO: finish implementation of this case below +W0114 16:49:04.959277 937972 doftable.hpp:2587] TODO: finish implementation of this case below +W0114 16:49:08.473210 937972 doftable.hpp:2587] TODO: finish implementation of this case below +W0114 16:49:10.011543 937972 doftable.hpp:2587] TODO: finish implementation of this case below + +---- + diff --git a/tmp/results/feelpp_app_io/ThermalBridgesENISO10211/gaya/2026_01_14T16_47_36/logs/dc0bc855.adoc b/tmp/results/feelpp_app_io/ThermalBridgesENISO10211/gaya/2026_01_14T16_47_36/logs/dc0bc855.adoc new file mode 100644 index 0000000..4d93dbc --- /dev/null +++ b/tmp/results/feelpp_app_io/ThermalBridgesENISO10211/gaya/2026_01_14T16_47_36/logs/dc0bc855.adoc @@ -0,0 +1,178 @@ += ReFrame logs + +== ReFrame scheduler script + +[source,bash] +---- +#!/bin/bash +#SBATCH --job-name="rfm_RegressionTest_dc0bc855" +#SBATCH --ntasks=2 +#SBATCH --ntasks-per-node=2 +#SBATCH --cpus-per-task=1 +#SBATCH --output=rfm_job.out +#SBATCH --error=rfm_job.err +#SBATCH --exclusive +#SBATCH --partition=public +#SBATCH --threads-per-core=1 +#SBATCH --time=0-00:15:00 +source /etc/profile.d/modules.sh +export PATH=/opt/apptainer/latest/bin/:$PATH +srun --cpus-per-task=1 apptainer exec -B"/data/home/cladellash/actions-runner/_work/apps-feelpp/apps-feelpp/reframe/stage/gaya/public/default/RegressionTest_dc0bc855:/rfm_workdir" --home /data/scratch/cladellash/feelppdb --bind /data/scratch/cladellash/feelppdb/input_data/:/input_data --env OMP_NUM_THREADS=1 --sharens --bind /opt/:/opt/ --bind /data/:/data/ /data/scratch/cladellash/images//apps-feelpp.sif feelpp_app_io --directory /data/scratch/cladellash/feelppdb/app-feelpp-io/io/dc0bc855/ThermalBridgesENISO10211 --discretization P1 --repository.append.np 0 --gmsh.filename /input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M1/case3_p2.json --nrun 1 + +---- + +== ReFrame error log + +[source,bash] +---- +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + + +---- + +== ReFrame output log + +[source,bash] +---- +[ Starting Feel++ ] application O version 0.111.0-preview.120 date 2026-Jan-14 +[feelpp] create Feel++ root repository: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/dc0bc855/ThermalBridgesENISO10211 + +[feelpp] create Feel++ geo repository: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/dc0bc855/ThermalBridgesENISO10211/geo + +[feelpp] create Feel++ expressions directory: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/dc0bc855/ThermalBridgesENISO10211/exprs + +[feelpp] create Feel++ logs directory: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/dc0bc855/ThermalBridgesENISO10211/logs + + . O files are stored in /data/scratch/cladellash/feelppdb/app-feelpp-io/io/dc0bc855/ThermalBridgesENISO10211/ + .. logfiles :/data/scratch/cladellash/feelppdb/app-feelpp-io/io/dc0bc855/ThermalBridgesENISO10211/logs +[loadMesh] Loading mesh in format json+h5: "/input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M1/case3_p2.json" +[loadMesh] Time : 7.35026s + [create function space] Time : 5.50592s + [create vectorial function space] Time : 12.8077s + [save field] Time : 0.0183026s + [save vector field] Time : 0.0255787s + [save mesh] Time : 0.314948s + [export time] Time : 7.35976s +Time load mesh 7.35026 +Time load create function space 5.50592 +Time load create vectorial function space 12.8077 +Time save mesh 0.314948 +Time save field 0.0183026 +Time save vector field 0.0255787 +Time to export 7.35976 ++----------------------------------------------------------------------------------------------------------------------------------------------------+ +| O | ++----------------------------------------------------------------------------------------------------------------------------------------------------+ +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | +| | logs | /data/scratch/cladellash/feelppdb/app-feelpp-io/io/dc0bc855/ThermalBridgesENISO10211/logs | | +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | +| | journal | /data/scratch/cladellash/feelppdb/app-feelpp-io/io/dc0bc855/ThermalBridgesENISO10211/journal.json | | +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | +| | directories | +------------------------------------------------------------------------------------------------------------------------------+ | | +| | | | /data/scratch/cladellash/feelppdb/app-feelpp-io/io/dc0bc855/ThermalBridgesENISO10211/ | | | +| | | +------------------------------------------------------------------------------------------------------------------------------+ | | +| | | | /data/home/cladellash/actions-runner/_work/apps-feelpp/apps-feelpp/reframe/stage/gaya/public/default/RegressionTest_dc0bc855 | | | +| | | +------------------------------------------------------------------------------------------------------------------------------+ | | +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | ++----------------------------------------------------------------------------------------------------------------------------------------------------+ + +[ Stopping Feel++ ] application O execution time 43.0888s + +---- + +== feelpp_app_io.INFO + +[source,bash] +---- +Log file created at: 2026/01/14 16:50:34 +Running on machine: gaya1 +Log line format: [IWEF]mmdd hh:mm:ss.uuuuuu threadid file:line] msg +I0114 16:50:34.276764 938702 environment.cpp:1708] File /input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M1/case3_p2.json found +I0114 16:50:34.278963 938702 loadmesh.hpp:246] Loading mesh in json+h5 format "/input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M1/case3_p2.json" +I0114 16:50:34.670753 938702 partitionio.hpp:1134] read stat points 200716,100428,0 +I0114 16:50:34.670763 938702 partitionio.hpp:1137] read stat elements 1084104,542147,0 +I0114 16:50:34.670764 938702 partitionio.hpp:1140] read stat ghost_elements 25612,12901,0 +I0114 16:50:34.670766 938702 partitionio.hpp:1143] read stat marked_faces 94934,48326,0 +I0114 16:50:34.670768 938702 partitionio.hpp:1146] read stat marked_edges 0,0,0 +I0114 16:50:34.670769 938702 partitionio.hpp:1149] read stat marked_points 0,0,0 +I0114 16:50:34.671150 938702 partitionio.hpp:1168] loaded points_ids:1x200716 +I0114 16:50:34.671546 938702 partitionio.hpp:1170] loaded points_coords:1x602148 +I0114 16:50:34.773018 938702 partitionio.hpp:1267] loaded elements:1x5420520 +I0114 16:50:35.019778 938702 partitionio.hpp:1373] loaded ghost_elements:1x25612 +I0114 16:50:35.127696 938702 partitionio.hpp:1569] loaded marked_subentities:1x379736 +I0114 16:50:35.311658 938702 meshimpl.hpp:1051] We have 48326 faces in the database +I0114 16:50:36.854550 938702 meshimpl.hpp:1325] We have now 1110821 faces in the mesh +I0114 16:50:40.408584 938702 meshimpl.hpp:1863] update boundary points... +I0114 16:50:40.468370 938702 meshimpl.hpp:1883] update boundary elements... +I0114 16:50:41.606328 938702 meshimpl.hpp:524] h average : 0.0325846 +I0114 16:50:41.606426 938702 meshimpl.hpp:525] h min : 0.0175455 +I0114 16:50:41.606429 938702 meshimpl.hpp:526] h max : 0.044348 +I0114 16:50:41.617527 938702 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 16:50:41.756080 938702 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 16:50:41.756100 938702 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 16:50:41.761065 938702 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 529246 on processor 0 +I0114 16:50:43.836982 938702 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 97896 +I0114 16:50:43.837049 938702 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 16:50:44.848881 938702 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 16:50:47.128718 938702 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 16:50:47.171437 938702 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 16:50:47.171456 938702 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 16:50:47.179922 938702 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 529246 on processor 0 +I0114 16:50:51.249063 938702 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 293688 +I0114 16:50:51.249135 938702 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 16:50:52.977083 938702 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 16:50:59.936582 938702 element_impl.hpp:199] creating element u : u +I0114 16:51:00.719444 938702 element_impl.hpp:199] creating element {x+y+z,x+y+z,x+y+z}:x:y:z : u +I0114 16:51:00.719555 938702 exporterimpl.hpp:219] [Exporter] format : ensightgold +I0114 16:51:00.719558 938702 exporterimpl.hpp:220] [Exporter] N : 1 +I0114 16:51:00.850605 938702 partitionio.hpp:319] writing mesh in HDF5 format in /data/scratch/cladellash/feelppdb/app-feelpp-io/io/dc0bc855/ThermalBridgesENISO10211/mesh_0.h5 +I0114 16:51:01.087477 938702 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 16:51:01.138818 938702 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 16:51:01.138835 938702 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 16:51:01.146548 938702 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 529246 on processor 0 +I0114 16:51:02.729882 938702 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 97896 +I0114 16:51:02.729934 938702 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 16:51:03.597544 938702 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 16:51:05.364545 938702 element_impl.hpp:199] creating element u : u +I0114 16:51:06.227876 938702 element_impl.hpp:199] creating element uV : u +I0114 16:51:06.227955 938702 element_impl.hpp:199] creating element uV : u +I0114 16:51:06.228015 938702 element_impl.hpp:199] creating element uV : u +I0114 16:51:06.238621 938702 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 16:51:06.275966 938702 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 16:51:06.275983 938702 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 16:51:06.283668 938702 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 529246 on processor 0 +I0114 16:51:07.833073 938702 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 97896 +I0114 16:51:07.833124 938702 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 16:51:08.617530 938702 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 16:51:13.061757 938702 exporterensightgold_impl.hpp:1250] writing part 1 +I0114 16:51:13.073436 938702 exporterensightgold_impl.hpp:1250] writing part 2 +I0114 16:51:13.106204 938702 exporterensightgold_impl.hpp:1250] writing part 3 +I0114 16:51:13.116648 938702 exporterensightgold_impl.hpp:1250] writing part 4 +I0114 16:51:13.145797 938702 exporterensightgold_impl.hpp:1250] writing part 5 +I0114 16:51:13.166917 938702 exporterensightgold_impl.hpp:1250] writing part 6 +I0114 16:51:13.178220 938702 exporterensightgold_impl.hpp:1376] ExporterEnsightGold::writeVariableFiles Nodal: 2 +I0114 16:51:13.178223 938702 exporterensightgold_impl.hpp:1377] ExporterEnsightGold::writeVariableFiles Element: 0 +I0114 16:51:17.095618 938702 environment.cpp:2423] Environment::clearSomeMemory before: PETSC get current memory usage (resident memory): 3.27575e+06 KBytes 3275.75 MBytes 3.27575 GBytes +I0114 16:51:17.095638 938702 environment.cpp:2428] Environment::clearSomeMemory before: PETSC get current PETSC Malloc usage: 0 KBytes 0 MBytes 0 GBytes +I0114 16:51:17.095644 938702 environment.cpp:2430] Environment::clearSomeMemory before: PETSC get maximum PETSC Malloc usage(largest memory ever used so far): 0 KBytes 0 MBytes 0 GBytes +I0114 16:51:17.095669 938702 environment.cpp:2423] Environment::clearSomeMemory after: PETSC get current memory usage (resident memory): 3.27575e+06 KBytes 3275.75 MBytes 3.27575 GBytes +I0114 16:51:17.095672 938702 environment.cpp:2428] Environment::clearSomeMemory after: PETSC get current PETSC Malloc usage: 0 KBytes 0 MBytes 0 GBytes +I0114 16:51:17.095674 938702 environment.cpp:2430] Environment::clearSomeMemory after: PETSC get maximum PETSC Malloc usage(largest memory ever used so far): 0 KBytes 0 MBytes 0 GBytes + +---- +== feelpp_app_io.WARNING + +[source,bash] +---- +Log file created at: 2026/01/14 16:50:44 +Running on machine: gaya1 +Log line format: [IWEF]mmdd hh:mm:ss.uuuuuu threadid file:line] msg +W0114 16:50:44.848881 938702 doftable.hpp:2587] TODO: finish implementation of this case below +W0114 16:50:52.977083 938702 doftable.hpp:2587] TODO: finish implementation of this case below +W0114 16:51:03.597544 938702 doftable.hpp:2587] TODO: finish implementation of this case below +W0114 16:51:08.617530 938702 doftable.hpp:2587] TODO: finish implementation of this case below + +---- + diff --git a/tmp/results/feelpp_app_io/ThermalBridgesENISO10211/gaya/2026_01_14T16_47_36/logs/dd32791a.adoc b/tmp/results/feelpp_app_io/ThermalBridgesENISO10211/gaya/2026_01_14T16_47_36/logs/dd32791a.adoc new file mode 100644 index 0000000..0e600f1 --- /dev/null +++ b/tmp/results/feelpp_app_io/ThermalBridgesENISO10211/gaya/2026_01_14T16_47_36/logs/dd32791a.adoc @@ -0,0 +1,190 @@ += ReFrame logs + +== ReFrame scheduler script + +[source,bash] +---- +#!/bin/bash +#SBATCH --job-name="rfm_RegressionTest_dd32791a" +#SBATCH --ntasks=8 +#SBATCH --ntasks-per-node=8 +#SBATCH --cpus-per-task=1 +#SBATCH --output=rfm_job.out +#SBATCH --error=rfm_job.err +#SBATCH --exclusive +#SBATCH --partition=public +#SBATCH --threads-per-core=1 +#SBATCH --time=0-00:15:00 +source /etc/profile.d/modules.sh +export PATH=/opt/apptainer/latest/bin/:$PATH +srun --cpus-per-task=1 apptainer exec -B"/data/home/cladellash/actions-runner/_work/apps-feelpp/apps-feelpp/reframe/stage/gaya/public/default/RegressionTest_dd32791a:/rfm_workdir" --home /data/scratch/cladellash/feelppdb --bind /data/scratch/cladellash/feelppdb/input_data/:/input_data --env OMP_NUM_THREADS=1 --sharens --bind /opt/:/opt/ --bind /data/:/data/ /data/scratch/cladellash/images//apps-feelpp.sif feelpp_app_io --directory /data/scratch/cladellash/feelppdb/app-feelpp-io/io/dd32791a/ThermalBridgesENISO10211 --discretization P1 --repository.append.np 0 --gmsh.filename /input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M2/case3_p8.json --nrun 1 + +---- + +== ReFrame error log + +[source,bash] +---- +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + + +---- + +== ReFrame output log + +[source,bash] +---- +[ Starting Feel++ ] application O version 0.111.0-preview.120 date 2026-Jan-14 +[feelpp] create Feel++ root repository: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/dd32791a/ThermalBridgesENISO10211 + +[feelpp] create Feel++ geo repository: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/dd32791a/ThermalBridgesENISO10211/geo + +[feelpp] create Feel++ expressions directory: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/dd32791a/ThermalBridgesENISO10211/exprs + +[feelpp] create Feel++ logs directory: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/dd32791a/ThermalBridgesENISO10211/logs + + . O files are stored in /data/scratch/cladellash/feelppdb/app-feelpp-io/io/dd32791a/ThermalBridgesENISO10211/ + .. logfiles :/data/scratch/cladellash/feelppdb/app-feelpp-io/io/dd32791a/ThermalBridgesENISO10211/logs +[loadMesh] Loading mesh in format json+h5: "/input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M2/case3_p8.json" +[loadMesh] Time : 20.4204s + [create function space] Time : 20.2835s + [create vectorial function space] Time : 36.7913s + [save field] Time : 0.0953255s + [save vector field] Time : 0.187683s + [save mesh] Time : 1.99731s + [export time] Time : 26.0589s +Time load mesh 20.4204 +Time load create function space 20.2835 +Time load create vectorial function space 36.7913 +Time save mesh 1.99731 +Time save field 0.0953255 +Time save vector field 0.187683 +Time to export 26.0589 ++----------------------------------------------------------------------------------------------------------------------------------------------------+ +| O | ++----------------------------------------------------------------------------------------------------------------------------------------------------+ +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | +| | logs | /data/scratch/cladellash/feelppdb/app-feelpp-io/io/dd32791a/ThermalBridgesENISO10211/logs | | +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | +| | journal | /data/scratch/cladellash/feelppdb/app-feelpp-io/io/dd32791a/ThermalBridgesENISO10211/journal.json | | +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | +| | directories | +------------------------------------------------------------------------------------------------------------------------------+ | | +| | | | /data/scratch/cladellash/feelppdb/app-feelpp-io/io/dd32791a/ThermalBridgesENISO10211/ | | | +| | | +------------------------------------------------------------------------------------------------------------------------------+ | | +| | | | /data/home/cladellash/actions-runner/_work/apps-feelpp/apps-feelpp/reframe/stage/gaya/public/default/RegressionTest_dd32791a | | | +| | | +------------------------------------------------------------------------------------------------------------------------------+ | | +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | ++----------------------------------------------------------------------------------------------------------------------------------------------------+ + +[ Stopping Feel++ ] application O execution time 134.883s + +---- + +== feelpp_app_io.INFO + +[source,bash] +---- +Log file created at: 2026/01/14 17:07:39 +Running on machine: gaya2 +Log line format: [IWEF]mmdd hh:mm:ss.uuuuuu threadid file:line] msg +I0114 17:07:39.125419 473427 environment.cpp:1708] File /input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M2/case3_p8.json found +I0114 17:07:39.127084 473427 loadmesh.hpp:246] Loading mesh in json+h5 format "/input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M2/case3_p8.json" +I0114 17:07:39.199738 473427 partitionio.hpp:1134] read stat points 1493168,189817,0 +I0114 17:07:39.199747 473427 partitionio.hpp:1137] read stat elements 8537206,1074004,0 +I0114 17:07:39.199749 473427 partitionio.hpp:1140] read stat ghost_elements 348013,50355,0 +I0114 17:07:39.199750 473427 partitionio.hpp:1143] read stat marked_faces 374422,52190,0 +I0114 17:07:39.199751 473427 partitionio.hpp:1146] read stat marked_edges 0,0,0 +I0114 17:07:39.199753 473427 partitionio.hpp:1149] read stat marked_points 0,0,0 +I0114 17:07:39.200169 473427 partitionio.hpp:1168] loaded points_ids:1x1493168 +I0114 17:07:39.200538 473427 partitionio.hpp:1170] loaded points_coords:1x4479504 +I0114 17:07:39.431005 473427 partitionio.hpp:1267] loaded elements:1x42686030 +I0114 17:07:41.167932 473427 partitionio.hpp:1373] loaded ghost_elements:1x348013 +I0114 17:07:41.245851 473427 partitionio.hpp:1569] loaded marked_subentities:1x1497688 +I0114 17:07:41.962579 473427 meshimpl.hpp:1051] We have 52190 faces in the database +I0114 17:07:46.006659 473427 meshimpl.hpp:1325] We have now 2184119 faces in the mesh +I0114 17:07:56.139415 473427 meshimpl.hpp:1863] update boundary points... +I0114 17:07:56.263279 473427 meshimpl.hpp:1883] update boundary elements... +I0114 17:07:59.523200 473427 meshimpl.hpp:524] h average : 0.01632 +I0114 17:07:59.523252 473427 meshimpl.hpp:525] h min : 0.0098099 +I0114 17:07:59.523254 473427 meshimpl.hpp:526] h max : 0.0226452 +I0114 17:07:59.542212 473427 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 17:07:59.943892 473427 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 17:07:59.943908 473427 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 17:07:59.952405 473427 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 1023649 on processor 0 +I0114 17:08:07.001843 473427 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 180513 +I0114 17:08:07.001917 473427 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 17:08:10.397096 473427 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 17:08:19.836619 473427 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 17:08:19.923053 473427 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 17:08:19.923065 473427 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 17:08:19.935156 473427 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 1023649 on processor 0 +I0114 17:08:31.644985 473427 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 541539 +I0114 17:08:31.645119 473427 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 17:08:36.361268 473427 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 17:08:56.628144 473427 element_impl.hpp:199] creating element u : u +I0114 17:08:58.458127 473427 element_impl.hpp:199] creating element {x+y+z,x+y+z,x+y+z}:x:y:z : u +I0114 17:08:58.458379 473427 exporterimpl.hpp:219] [Exporter] format : ensightgold +I0114 17:08:58.458382 473427 exporterimpl.hpp:220] [Exporter] N : 1 +I0114 17:08:58.958478 473427 partitionio.hpp:319] writing mesh in HDF5 format in /data/scratch/cladellash/feelppdb/app-feelpp-io/io/dd32791a/ThermalBridgesENISO10211/mesh_0.h5 +I0114 17:09:00.755102 473427 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 17:09:00.870394 473427 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 17:09:00.870404 473427 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 17:09:00.883033 473427 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 1023649 on processor 0 +I0114 17:09:07.268340 473427 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 180513 +I0114 17:09:07.268394 473427 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 17:09:09.422066 473427 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 17:09:17.579075 473427 element_impl.hpp:199] creating element u : u +I0114 17:09:19.634569 473427 element_impl.hpp:199] creating element uV : u +I0114 17:09:19.634744 473427 element_impl.hpp:199] creating element uV : u +I0114 17:09:19.635115 473427 element_impl.hpp:199] creating element uV : u +I0114 17:09:19.660729 473427 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 17:09:19.736922 473427 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 17:09:19.736932 473427 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 17:09:19.752054 473427 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 1023649 on processor 0 +I0114 17:09:25.454465 473427 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 180513 +I0114 17:09:25.454512 473427 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 17:09:28.215526 473427 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 17:09:43.402933 473427 exporterensightgold_impl.hpp:1250] writing part 1 +I0114 17:09:43.819165 473427 exporterensightgold_impl.hpp:1250] writing part 2 +I0114 17:09:44.102363 473427 exporterensightgold_impl.hpp:1250] writing part 3 +I0114 17:09:44.195065 473427 exporterensightgold_impl.hpp:1250] writing part 4 +I0114 17:09:44.204016 473427 exporterensightgold_impl.hpp:1250] writing part 5 +I0114 17:09:44.215638 473427 exporterensightgold_impl.hpp:1250] writing part 6 +I0114 17:09:44.224287 473427 exporterensightgold_impl.hpp:1376] ExporterEnsightGold::writeVariableFiles Nodal: 2 +I0114 17:09:44.224292 473427 exporterensightgold_impl.hpp:1377] ExporterEnsightGold::writeVariableFiles Element: 0 +I0114 17:09:53.722788 473427 environment.cpp:2423] Environment::clearSomeMemory before: PETSC get current memory usage (resident memory): 6.35647e+06 KBytes 6356.47 MBytes 6.35647 GBytes +I0114 17:09:53.722807 473427 environment.cpp:2428] Environment::clearSomeMemory before: PETSC get current PETSC Malloc usage: 0 KBytes 0 MBytes 0 GBytes +I0114 17:09:53.722812 473427 environment.cpp:2430] Environment::clearSomeMemory before: PETSC get maximum PETSC Malloc usage(largest memory ever used so far): 0 KBytes 0 MBytes 0 GBytes +I0114 17:09:53.722836 473427 environment.cpp:2423] Environment::clearSomeMemory after: PETSC get current memory usage (resident memory): 6.35647e+06 KBytes 6356.47 MBytes 6.35647 GBytes +I0114 17:09:53.722838 473427 environment.cpp:2428] Environment::clearSomeMemory after: PETSC get current PETSC Malloc usage: 0 KBytes 0 MBytes 0 GBytes +I0114 17:09:53.722841 473427 environment.cpp:2430] Environment::clearSomeMemory after: PETSC get maximum PETSC Malloc usage(largest memory ever used so far): 0 KBytes 0 MBytes 0 GBytes + +---- +== feelpp_app_io.WARNING + +[source,bash] +---- +Log file created at: 2026/01/14 17:08:10 +Running on machine: gaya2 +Log line format: [IWEF]mmdd hh:mm:ss.uuuuuu threadid file:line] msg +W0114 17:08:10.397096 473427 doftable.hpp:2587] TODO: finish implementation of this case below +W0114 17:08:36.361268 473427 doftable.hpp:2587] TODO: finish implementation of this case below +W0114 17:09:09.422066 473427 doftable.hpp:2587] TODO: finish implementation of this case below +W0114 17:09:28.215526 473427 doftable.hpp:2587] TODO: finish implementation of this case below + +---- + diff --git a/tmp/results/feelpp_app_io/ThermalBridgesENISO10211/gaya/2026_01_14T16_47_36/logs/dd8dccb4.adoc b/tmp/results/feelpp_app_io/ThermalBridgesENISO10211/gaya/2026_01_14T16_47_36/logs/dd8dccb4.adoc new file mode 100644 index 0000000..ab71478 --- /dev/null +++ b/tmp/results/feelpp_app_io/ThermalBridgesENISO10211/gaya/2026_01_14T16_47_36/logs/dd8dccb4.adoc @@ -0,0 +1,238 @@ += ReFrame logs + +== ReFrame scheduler script + +[source,bash] +---- +#!/bin/bash +#SBATCH --job-name="rfm_RegressionTest_dd8dccb4" +#SBATCH --ntasks=32 +#SBATCH --ntasks-per-node=32 +#SBATCH --cpus-per-task=1 +#SBATCH --output=rfm_job.out +#SBATCH --error=rfm_job.err +#SBATCH --exclusive +#SBATCH --partition=public +#SBATCH --threads-per-core=1 +#SBATCH --time=0-00:15:00 +source /etc/profile.d/modules.sh +export PATH=/opt/apptainer/latest/bin/:$PATH +srun --cpus-per-task=1 apptainer exec -B"/data/home/cladellash/actions-runner/_work/apps-feelpp/apps-feelpp/reframe/stage/gaya/public/default/RegressionTest_dd8dccb4:/rfm_workdir" --home /data/scratch/cladellash/feelppdb --bind /data/scratch/cladellash/feelppdb/input_data/:/input_data --env OMP_NUM_THREADS=1 --sharens --bind /opt/:/opt/ --bind /data/:/data/ /data/scratch/cladellash/images//apps-feelpp.sif feelpp_app_io --directory /data/scratch/cladellash/feelppdb/app-feelpp-io/io/dd8dccb4/ThermalBridgesENISO10211 --discretization P2 --repository.append.np 0 --gmsh.filename /input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M1/case3_p32.json --nrun 1 + +---- + +== ReFrame error log + +[source,bash] +---- +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + + +---- + +== ReFrame output log + +[source,bash] +---- +[ Starting Feel++ ] application O version 0.111.0-preview.120 date 2026-Jan-14 +[feelpp] create Feel++ root repository: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/dd8dccb4/ThermalBridgesENISO10211 + +[feelpp] create Feel++ geo repository: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/dd8dccb4/ThermalBridgesENISO10211/geo + +[feelpp] create Feel++ expressions directory: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/dd8dccb4/ThermalBridgesENISO10211/exprs + +[feelpp] create Feel++ logs directory: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/dd8dccb4/ThermalBridgesENISO10211/logs + + . O files are stored in /data/scratch/cladellash/feelppdb/app-feelpp-io/io/dd8dccb4/ThermalBridgesENISO10211/ + .. logfiles :/data/scratch/cladellash/feelppdb/app-feelpp-io/io/dd8dccb4/ThermalBridgesENISO10211/logs +[loadMesh] Loading mesh in format json+h5: "/input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M1/case3_p32.json" +[loadMesh] Time : 0.889132s + [create function space] Time : 1.0191s + [create vectorial function space] Time : 2.32135s + [save field] Time : 0.112152s + [save vector field] Time : 0.225479s + [save mesh] Time : 0.397925s + [export time] Time : 2.19839s +Time load mesh 0.889132 +Time load create function space 1.0191 +Time load create vectorial function space 2.32135 +Time save mesh 0.397925 +Time save field 0.112152 +Time save vector field 0.225479 +Time to export 2.19839 ++----------------------------------------------------------------------------------------------------------------------------------------------------+ +| O | ++----------------------------------------------------------------------------------------------------------------------------------------------------+ +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | +| | logs | /data/scratch/cladellash/feelppdb/app-feelpp-io/io/dd8dccb4/ThermalBridgesENISO10211/logs | | +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | +| | journal | /data/scratch/cladellash/feelppdb/app-feelpp-io/io/dd8dccb4/ThermalBridgesENISO10211/journal.json | | +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | +| | directories | +------------------------------------------------------------------------------------------------------------------------------+ | | +| | | | /data/scratch/cladellash/feelppdb/app-feelpp-io/io/dd8dccb4/ThermalBridgesENISO10211/ | | | +| | | +------------------------------------------------------------------------------------------------------------------------------+ | | +| | | | /data/home/cladellash/actions-runner/_work/apps-feelpp/apps-feelpp/reframe/stage/gaya/public/default/RegressionTest_dd8dccb4 | | | +| | | +------------------------------------------------------------------------------------------------------------------------------+ | | +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | ++----------------------------------------------------------------------------------------------------------------------------------------------------+ + +[ Stopping Feel++ ] application O execution time 8.71895s + +---- + +== feelpp_app_io.INFO + +[source,bash] +---- +Log file created at: 2026/01/14 16:52:31 +Running on machine: gaya5 +Log line format: [IWEF]mmdd hh:mm:ss.uuuuuu threadid file:line] msg +I0114 16:52:31.019622 712871 environment.cpp:1708] File /input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M1/case3_p32.json found +I0114 16:52:31.022532 712871 loadmesh.hpp:246] Loading mesh in json+h5 format "/input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M1/case3_p32.json" +I0114 16:52:31.082075 712871 partitionio.hpp:1134] read stat points 252711,8191,0 +I0114 16:52:31.082085 712871 partitionio.hpp:1137] read stat elements 1267743,41598,0 +I0114 16:52:31.082087 712871 partitionio.hpp:1140] read stat ghost_elements 209251,8657,0 +I0114 16:52:31.082089 712871 partitionio.hpp:1143] read stat marked_faces 107831,2484,0 +I0114 16:52:31.082091 712871 partitionio.hpp:1146] read stat marked_edges 0,0,0 +I0114 16:52:31.082093 712871 partitionio.hpp:1149] read stat marked_points 0,0,0 +I0114 16:52:31.083483 712871 partitionio.hpp:1168] loaded points_ids:1x252711 +I0114 16:52:31.084753 712871 partitionio.hpp:1170] loaded points_coords:1x758133 +I0114 16:52:31.099092 712871 partitionio.hpp:1267] loaded elements:1x6338715 +I0114 16:52:31.148869 712871 partitionio.hpp:1373] loaded ghost_elements:1x209251 +I0114 16:52:31.155606 712871 partitionio.hpp:1569] loaded marked_subentities:1x431324 +I0114 16:52:31.195252 712871 meshimpl.hpp:1051] We have 2484 faces in the database +I0114 16:52:31.299283 712871 meshimpl.hpp:1325] We have now 86048 faces in the mesh +I0114 16:52:31.737808 712871 meshimpl.hpp:1863] update boundary points... +I0114 16:52:31.743616 712871 meshimpl.hpp:1883] update boundary elements... +I0114 16:52:31.875530 712871 meshimpl.hpp:524] h average : 0.0325846 +I0114 16:52:31.875579 712871 meshimpl.hpp:525] h min : 0.0175455 +I0114 16:52:31.875582 712871 meshimpl.hpp:526] h max : 0.044348 +I0114 16:52:31.886984 712871 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 16:52:31.896607 712871 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 16:52:31.896615 712871 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 16:52:31.897042 712871 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 32941 on processor 0 +I0114 16:52:32.237731 712871 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 48138 +I0114 16:52:32.237869 712871 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 16:52:32.511180 712871 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 16:52:32.907233 712871 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 16:52:32.911459 712871 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 16:52:32.911466 712871 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 16:52:32.911937 712871 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 32941 on processor 0 +I0114 16:52:33.461242 712871 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 144414 +I0114 16:52:33.461302 712871 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 16:52:34.108208 712871 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 16:52:35.228673 712871 element_impl.hpp:199] creating element u : u +I0114 16:52:35.404104 712871 element_impl.hpp:199] creating element {x+y+z,x+y+z,x+y+z}:x:y:z : u +I0114 16:52:35.404181 712871 exporterimpl.hpp:219] [Exporter] format : ensightgold +I0114 16:52:35.404184 712871 exporterimpl.hpp:220] [Exporter] N : 1 +I0114 16:52:35.750222 712871 partitionio.hpp:319] writing mesh in HDF5 format in /data/scratch/cladellash/feelppdb/app-feelpp-io/io/dd8dccb4/ThermalBridgesENISO10211/mesh_0.h5 +I0114 16:52:36.144676 712871 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 16:52:36.153025 712871 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 16:52:36.153035 712871 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 16:52:36.153424 712871 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 32941 on processor 0 +I0114 16:52:36.248039 712871 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 6467 +I0114 16:52:36.248170 712871 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 16:52:36.379187 712871 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 16:52:36.473569 712871 element_impl.hpp:199] creating element u : u +I0114 16:52:36.564204 712871 element_impl.hpp:199] creating element uV : u +I0114 16:52:36.564229 712871 element_impl.hpp:199] creating element uV : u +I0114 16:52:36.564239 712871 element_impl.hpp:199] creating element uV : u +I0114 16:52:36.565698 712871 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 16:52:36.568853 712871 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 16:52:36.568861 712871 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 16:52:36.569401 712871 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 32941 on processor 0 +I0114 16:52:36.855209 712871 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 48138 +I0114 16:52:36.855243 712871 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 16:52:37.140064 712871 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 16:52:38.025811 712871 exporterensightgold_impl.hpp:1250] writing part 1 +I0114 16:52:38.255954 712871 exporterensightgold_impl.hpp:1250] writing part 2 +I0114 16:52:38.277956 712871 exporterensightgold_impl.hpp:1250] writing part 3 +I0114 16:52:38.289996 712871 exporterensightgold_impl.hpp:1250] writing part 4 +I0114 16:52:38.294433 712871 exporterensightgold_impl.hpp:1250] writing part 5 +I0114 16:52:38.301627 712871 exporterensightgold_impl.hpp:1250] writing part 6 +I0114 16:52:38.307708 712871 exporterensightgold_impl.hpp:1376] ExporterEnsightGold::writeVariableFiles Nodal: 2 +I0114 16:52:38.307713 712871 exporterensightgold_impl.hpp:1377] ExporterEnsightGold::writeVariableFiles Element: 0 +I0114 16:52:39.328207 712871 environment.cpp:2423] Environment::clearSomeMemory before: PETSC get current memory usage (resident memory): 654311 KBytes 654.311 MBytes 0.654311 GBytes +I0114 16:52:39.328236 712871 environment.cpp:2428] Environment::clearSomeMemory before: PETSC get current PETSC Malloc usage: 0 KBytes 0 MBytes 0 GBytes +I0114 16:52:39.328248 712871 environment.cpp:2430] Environment::clearSomeMemory before: PETSC get maximum PETSC Malloc usage(largest memory ever used so far): 0 KBytes 0 MBytes 0 GBytes +I0114 16:52:39.328435 712871 environment.cpp:2423] Environment::clearSomeMemory after: PETSC get current memory usage (resident memory): 654311 KBytes 654.311 MBytes 0.654311 GBytes +I0114 16:52:39.328442 712871 environment.cpp:2428] Environment::clearSomeMemory after: PETSC get current PETSC Malloc usage: 0 KBytes 0 MBytes 0 GBytes +I0114 16:52:39.328445 712871 environment.cpp:2430] Environment::clearSomeMemory after: PETSC get maximum PETSC Malloc usage(largest memory ever used so far): 0 KBytes 0 MBytes 0 GBytes + +---- +== feelpp_app_io.WARNING + +[source,bash] +---- +Log file created at: 2026/01/14 16:52:32 +Running on machine: gaya5 +Log line format: [IWEF]mmdd hh:mm:ss.uuuuuu threadid file:line] msg +W0114 16:52:32.511180 712871 doftable.hpp:2587] TODO: finish implementation of this case below +W0114 16:52:34.108208 712871 doftable.hpp:2587] TODO: finish implementation of this case below +W0114 16:52:36.379187 712871 doftable.hpp:2587] TODO: finish implementation of this case below +W0114 16:52:37.140064 712871 doftable.hpp:2587] TODO: finish implementation of this case below + +---- + diff --git a/tmp/results/feelpp_app_io/ThermalBridgesENISO10211/gaya/2026_01_14T16_47_36/logs/df8e2e1f.adoc b/tmp/results/feelpp_app_io/ThermalBridgesENISO10211/gaya/2026_01_14T16_47_36/logs/df8e2e1f.adoc new file mode 100644 index 0000000..f5dc933 --- /dev/null +++ b/tmp/results/feelpp_app_io/ThermalBridgesENISO10211/gaya/2026_01_14T16_47_36/logs/df8e2e1f.adoc @@ -0,0 +1,430 @@ += ReFrame logs + +== ReFrame scheduler script + +[source,bash] +---- +#!/bin/bash +#SBATCH --job-name="rfm_RegressionTest_df8e2e1f" +#SBATCH --ntasks=128 +#SBATCH --ntasks-per-node=128 +#SBATCH --cpus-per-task=1 +#SBATCH --output=rfm_job.out +#SBATCH --error=rfm_job.err +#SBATCH --exclusive +#SBATCH --partition=public +#SBATCH --threads-per-core=1 +#SBATCH --time=0-00:15:00 +source /etc/profile.d/modules.sh +export PATH=/opt/apptainer/latest/bin/:$PATH +srun --cpus-per-task=1 apptainer exec -B"/data/home/cladellash/actions-runner/_work/apps-feelpp/apps-feelpp/reframe/stage/gaya/public/default/RegressionTest_df8e2e1f:/rfm_workdir" --home /data/scratch/cladellash/feelppdb --bind /data/scratch/cladellash/feelppdb/input_data/:/input_data --env OMP_NUM_THREADS=1 --sharens --bind /opt/:/opt/ --bind /data/:/data/ /data/scratch/cladellash/images//apps-feelpp.sif feelpp_app_io --directory /data/scratch/cladellash/feelppdb/app-feelpp-io/io/df8e2e1f/ThermalBridgesENISO10211 --discretization P1 --repository.append.np 0 --gmsh.filename /input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M2/case3_p128.json --nrun 1 + +---- + +== ReFrame error log + +[source,bash] +---- +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + + +---- + +== ReFrame output log + +[source,bash] +---- +[ Starting Feel++ ] application O version 0.111.0-preview.120 date 2026-Jan-14 +[feelpp] create Feel++ root repository: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/df8e2e1f/ThermalBridgesENISO10211 + +[feelpp] create Feel++ geo repository: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/df8e2e1f/ThermalBridgesENISO10211/geo + +[feelpp] create Feel++ expressions directory: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/df8e2e1f/ThermalBridgesENISO10211/exprs + +[feelpp] create Feel++ logs directory: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/df8e2e1f/ThermalBridgesENISO10211/logs + + . O files are stored in /data/scratch/cladellash/feelppdb/app-feelpp-io/io/df8e2e1f/ThermalBridgesENISO10211/ + .. logfiles :/data/scratch/cladellash/feelppdb/app-feelpp-io/io/df8e2e1f/ThermalBridgesENISO10211/logs +[loadMesh] Loading mesh in format json+h5: "/input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M2/case3_p128.json" +[loadMesh] Time : 3.35734s + [create function space] Time : 1.13948s + [create vectorial function space] Time : 2.61737s + [save field] Time : 0.295756s + [save vector field] Time : 0.452688s + [save mesh] Time : 2.40276s + [export time] Time : 5.64534s +Time load mesh 3.35734 +Time load create function space 1.13948 +Time load create vectorial function space 2.61737 +Time save mesh 2.40276 +Time save field 0.295756 +Time save vector field 0.452688 +Time to export 5.64534 ++----------------------------------------------------------------------------------------------------------------------------------------------------+ +| O | ++----------------------------------------------------------------------------------------------------------------------------------------------------+ +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | +| | logs | /data/scratch/cladellash/feelppdb/app-feelpp-io/io/df8e2e1f/ThermalBridgesENISO10211/logs | | +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | +| | journal | /data/scratch/cladellash/feelppdb/app-feelpp-io/io/df8e2e1f/ThermalBridgesENISO10211/journal.json | | +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | +| | directories | +------------------------------------------------------------------------------------------------------------------------------+ | | +| | | | /data/scratch/cladellash/feelppdb/app-feelpp-io/io/df8e2e1f/ThermalBridgesENISO10211/ | | | +| | | +------------------------------------------------------------------------------------------------------------------------------+ | | +| | | | /data/home/cladellash/actions-runner/_work/apps-feelpp/apps-feelpp/reframe/stage/gaya/public/default/RegressionTest_df8e2e1f | | | +| | | +------------------------------------------------------------------------------------------------------------------------------+ | | +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | ++----------------------------------------------------------------------------------------------------------------------------------------------------+ + +[ Stopping Feel++ ] application O execution time 19.7085s + +---- + +== feelpp_app_io.INFO + +[source,bash] +---- +Log file created at: 2026/01/14 16:48:04 +Running on machine: gaya5 +Log line format: [IWEF]mmdd hh:mm:ss.uuuuuu threadid file:line] msg +I0114 16:48:04.723008 705754 environment.cpp:1708] File /input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M2/case3_p128.json found +I0114 16:48:04.728044 705754 loadmesh.hpp:246] Loading mesh in json+h5 format "/input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M2/case3_p128.json" +I0114 16:48:04.938198 705754 partitionio.hpp:1134] read stat points 1888238,15652,0 +I0114 16:48:04.938210 705754 partitionio.hpp:1137] read stat elements 9998789,83104,0 +I0114 16:48:04.938213 705754 partitionio.hpp:1140] read stat ghost_elements 1809596,18434,0 +I0114 16:48:04.938215 705754 partitionio.hpp:1143] read stat marked_faces 429035,2082,0 +I0114 16:48:04.938216 705754 partitionio.hpp:1146] read stat marked_edges 0,0,0 +I0114 16:48:04.938218 705754 partitionio.hpp:1149] read stat marked_points 0,0,0 +I0114 16:48:04.942523 705754 partitionio.hpp:1168] loaded points_ids:1x1888238 +I0114 16:48:04.944927 705754 partitionio.hpp:1170] loaded points_coords:1x5664714 +I0114 16:48:05.196543 705754 partitionio.hpp:1267] loaded elements:1x49993945 +I0114 16:48:05.765978 705754 partitionio.hpp:1373] loaded ghost_elements:1x1809596 +I0114 16:48:06.026583 705754 partitionio.hpp:1569] loaded marked_subentities:1x1716140 +I0114 16:48:06.178848 705754 meshimpl.hpp:1051] We have 2082 faces in the database +I0114 16:48:06.447052 705754 meshimpl.hpp:1325] We have now 170652 faces in the mesh +I0114 16:48:07.679744 705754 meshimpl.hpp:1863] update boundary points... +I0114 16:48:07.693639 705754 meshimpl.hpp:1883] update boundary elements... +I0114 16:48:08.025959 705754 meshimpl.hpp:524] h average : 0.01632 +I0114 16:48:08.025993 705754 meshimpl.hpp:525] h min : 0.0098099 +I0114 16:48:08.025996 705754 meshimpl.hpp:526] h max : 0.0226452 +I0114 16:48:08.034703 705754 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 16:48:08.062040 705754 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 16:48:08.062052 705754 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 16:48:08.062932 705754 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 64670 on processor 0 +I0114 16:48:08.286444 705754 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 12163 +I0114 16:48:08.286490 705754 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 16:48:08.724104 705754 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 16:48:09.175766 705754 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 16:48:09.182782 705754 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 16:48:09.182791 705754 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 16:48:09.183765 705754 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 64670 on processor 0 +I0114 16:48:09.612969 705754 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 36489 +I0114 16:48:09.613020 705754 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 16:48:10.446300 705754 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 16:48:11.793191 705754 element_impl.hpp:199] creating element u : u +I0114 16:48:11.967271 705754 element_impl.hpp:199] creating element {x+y+z,x+y+z,x+y+z}:x:y:z : u +I0114 16:48:11.967320 705754 exporterimpl.hpp:219] [Exporter] format : ensightgold +I0114 16:48:11.967324 705754 exporterimpl.hpp:220] [Exporter] N : 1 +I0114 16:48:12.737107 705754 partitionio.hpp:319] writing mesh in HDF5 format in /data/scratch/cladellash/feelppdb/app-feelpp-io/io/df8e2e1f/ThermalBridgesENISO10211/mesh_0.h5 +I0114 16:48:15.124552 705754 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 16:48:15.133973 705754 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 16:48:15.133983 705754 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 16:48:15.135206 705754 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 64670 on processor 0 +I0114 16:48:15.295431 705754 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 12163 +I0114 16:48:15.295455 705754 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 16:48:15.770460 705754 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 16:48:16.123210 705754 element_impl.hpp:199] creating element u : u +I0114 16:48:16.328167 705754 element_impl.hpp:199] creating element uV : u +I0114 16:48:16.328224 705754 element_impl.hpp:199] creating element uV : u +I0114 16:48:16.328254 705754 element_impl.hpp:199] creating element uV : u +I0114 16:48:16.334456 705754 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 16:48:16.343278 705754 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 16:48:16.343289 705754 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 16:48:16.344352 705754 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 64670 on processor 0 +I0114 16:48:16.501212 705754 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 12163 +I0114 16:48:16.501251 705754 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 16:48:16.911427 705754 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 16:48:18.109594 705754 exporterensightgold_impl.hpp:1250] writing part 1 +I0114 16:48:19.031350 705754 exporterensightgold_impl.hpp:1250] writing part 2 +I0114 16:48:19.811923 705754 exporterensightgold_impl.hpp:1250] writing part 3 +I0114 16:48:19.934248 705754 exporterensightgold_impl.hpp:1250] writing part 4 +I0114 16:48:20.157477 705754 exporterensightgold_impl.hpp:1250] writing part 5 +I0114 16:48:20.211771 705754 exporterensightgold_impl.hpp:1250] writing part 6 +I0114 16:48:20.227922 705754 exporterensightgold_impl.hpp:1376] ExporterEnsightGold::writeVariableFiles Nodal: 2 +I0114 16:48:20.227931 705754 exporterensightgold_impl.hpp:1377] ExporterEnsightGold::writeVariableFiles Element: 0 +I0114 16:48:22.985765 705754 environment.cpp:2423] Environment::clearSomeMemory before: PETSC get current memory usage (resident memory): 654311 KBytes 654.311 MBytes 0.654311 GBytes +I0114 16:48:22.985780 705754 environment.cpp:2428] Environment::clearSomeMemory before: PETSC get current PETSC Malloc usage: 0 KBytes 0 MBytes 0 GBytes +I0114 16:48:22.985786 705754 environment.cpp:2430] Environment::clearSomeMemory before: PETSC get maximum PETSC Malloc usage(largest memory ever used so far): 0 KBytes 0 MBytes 0 GBytes +I0114 16:48:22.985932 705754 environment.cpp:2423] Environment::clearSomeMemory after: PETSC get current memory usage (resident memory): 654311 KBytes 654.311 MBytes 0.654311 GBytes +I0114 16:48:22.985939 705754 environment.cpp:2428] Environment::clearSomeMemory after: PETSC get current PETSC Malloc usage: 0 KBytes 0 MBytes 0 GBytes +I0114 16:48:22.985944 705754 environment.cpp:2430] Environment::clearSomeMemory after: PETSC get maximum PETSC Malloc usage(largest memory ever used so far): 0 KBytes 0 MBytes 0 GBytes + +---- +== feelpp_app_io.WARNING + +[source,bash] +---- +Log file created at: 2026/01/14 16:48:08 +Running on machine: gaya5 +Log line format: [IWEF]mmdd hh:mm:ss.uuuuuu threadid file:line] msg +W0114 16:48:08.724104 705754 doftable.hpp:2587] TODO: finish implementation of this case below +W0114 16:48:10.446300 705754 doftable.hpp:2587] TODO: finish implementation of this case below +W0114 16:48:15.770460 705754 doftable.hpp:2587] TODO: finish implementation of this case below +W0114 16:48:16.911427 705754 doftable.hpp:2587] TODO: finish implementation of this case below + +---- + diff --git a/tmp/results/feelpp_app_io/ThermalBridgesENISO10211/gaya/2026_01_14T16_47_36/logs/e354e552.adoc b/tmp/results/feelpp_app_io/ThermalBridgesENISO10211/gaya/2026_01_14T16_47_36/logs/e354e552.adoc new file mode 100644 index 0000000..86b85b0 --- /dev/null +++ b/tmp/results/feelpp_app_io/ThermalBridgesENISO10211/gaya/2026_01_14T16_47_36/logs/e354e552.adoc @@ -0,0 +1,257 @@ += ReFrame logs + +== ReFrame scheduler script + +[source,bash] +---- +#!/bin/bash +#SBATCH --job-name="rfm_RegressionTest_e354e552" +#SBATCH --ntasks=64 +#SBATCH --ntasks-per-node=64 +#SBATCH --cpus-per-task=1 +#SBATCH --output=rfm_job.out +#SBATCH --error=rfm_job.err +#SBATCH --exclusive +#SBATCH --partition=public +#SBATCH --threads-per-core=1 +#SBATCH --time=0-00:15:00 +source /etc/profile.d/modules.sh +export PATH=/opt/apptainer/latest/bin/:$PATH +srun --cpus-per-task=1 apptainer exec -B"/data/home/cladellash/actions-runner/_work/apps-feelpp/apps-feelpp/reframe/stage/gaya/public/default/RegressionTest_e354e552:/rfm_workdir" --home /data/scratch/cladellash/feelppdb --bind /data/scratch/cladellash/feelppdb/input_data/:/input_data --env OMP_NUM_THREADS=1 --sharens --bind /opt/:/opt/ --bind /data/:/data/ /data/scratch/cladellash/images//apps-feelpp.sif feelpp_app_io --directory /data/scratch/cladellash/feelppdb/app-feelpp-io/io/e354e552/ThermalBridgesENISO10211 --discretization P2 --repository.append.np 0 --gmsh.filename /input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M3/case3_p64.json --nrun 1 + +---- + +== ReFrame error log + +[source,bash] +---- +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +srun: Job step aborted: Waiting up to 32 seconds for job step to finish. +slurmstepd-gaya4: error: *** STEP 33142.0 ON gaya4 CANCELLED AT 2026-01-14T17:20:04 DUE TO TIME LIMIT *** +slurmstepd-gaya4: error: *** JOB 33142 ON gaya4 CANCELLED AT 2026-01-14T17:20:04 DUE TO TIME LIMIT *** +srun: error: gaya4: tasks 0-7,9-17,20-22,24-27,29-30,32-40,42-46,48-50,53-59,61-63: Terminated +srun: got SIGCONT +srun: error: gaya4: tasks 8,19,28,31,41,47,51-52,60: Terminated +srun: forcing job termination +srun: error: gaya4: task 18: Terminated +slurmstepd-gaya4: error: mpi/pmix_v5: _errhandler: gaya4 [0]: pmixp_client_v2.c:211: Error handler invoked: status = -61, source = [slurm.pmix.33142.0:56] +srun: error: gaya4: task 23: Exited with exit code 143 + +---- + +== ReFrame output log + +[source,bash] +---- +[ Starting Feel++ ] application O version 0.111.0-preview.120 date 2026-Jan-14 +[feelpp] create Feel++ root repository: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/e354e552/ThermalBridgesENISO10211 + +[feelpp] create Feel++ geo repository: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/e354e552/ThermalBridgesENISO10211/geo + +[feelpp] create Feel++ expressions directory: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/e354e552/ThermalBridgesENISO10211/exprs + +[feelpp] create Feel++ logs directory: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/e354e552/ThermalBridgesENISO10211/logs + + . O files are stored in /data/scratch/cladellash/feelppdb/app-feelpp-io/io/e354e552/ThermalBridgesENISO10211/ + .. logfiles :/data/scratch/cladellash/feelppdb/app-feelpp-io/io/e354e552/ThermalBridgesENISO10211/logs +[loadMesh] Loading mesh in format json+h5: "/input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M3/case3_p64.json" + +---- + +== feelpp_app_io.INFO + +[source,bash] +---- +Log file created at: 2026/01/14 17:04:54 +Running on machine: gaya4 +Log line format: [IWEF]mmdd hh:mm:ss.uuuuuu threadid file:line] msg +I0114 17:04:54.543766 754763 environment.cpp:1708] File /input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M3/case3_p64.json found +I0114 17:04:54.545574 754763 loadmesh.hpp:246] Loading mesh in json+h5 format "/input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M3/case3_p64.json" +I0114 17:04:54.629472 754763 partitionio.hpp:1134] read stat points 11850574,183334,0 +I0114 17:04:54.629488 754763 partitionio.hpp:1137] read stat elements 68915492,1068529,0 +I0114 17:04:54.629490 754763 partitionio.hpp:1140] read stat ghost_elements 4928293,67533,0 +I0114 17:04:54.629492 754763 partitionio.hpp:1143] read stat marked_faces 1561612,26399,0 +I0114 17:04:54.629494 754763 partitionio.hpp:1146] read stat marked_edges 0,0,0 +I0114 17:04:54.629495 754763 partitionio.hpp:1149] read stat marked_points 0,0,0 +I0114 17:04:54.631808 754763 partitionio.hpp:1168] loaded points_ids:1x11850574 +I0114 17:04:54.633910 754763 partitionio.hpp:1170] loaded points_coords:1x35551722 +I0114 17:04:55.874532 754763 partitionio.hpp:1267] loaded elements:1x344577460 +I0114 17:05:02.152590 754763 partitionio.hpp:1373] loaded ghost_elements:1x4928293 +I0114 17:05:02.245163 754763 partitionio.hpp:1569] loaded marked_subentities:1x6246448 +I0114 17:05:03.336205 754763 meshimpl.hpp:1051] We have 26399 faces in the database +I0114 17:05:07.595628 754763 meshimpl.hpp:1325] We have now 2162072 faces in the mesh +I0114 17:05:21.767364 754763 meshimpl.hpp:1863] update boundary points... +I0114 17:05:21.926587 754763 meshimpl.hpp:1883] update boundary elements... +I0114 17:05:26.502998 754763 meshimpl.hpp:524] h average : 0.00818335 +I0114 17:05:26.503449 754763 meshimpl.hpp:525] h min : 0.00477946 +I0114 17:05:26.503454 754763 meshimpl.hpp:526] h max : 0.0116148 +I0114 17:05:26.575922 754763 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 17:05:26.897891 754763 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 17:05:26.897905 754763 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 17:05:26.910060 754763 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 1000996 on processor 0 +I0114 17:05:45.958108 754763 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 1366359 +I0114 17:05:45.958282 754763 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 17:05:55.853724 754763 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 17:06:19.043828 754763 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 17:06:19.184269 754763 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 17:06:19.184293 754763 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 17:06:19.197649 754763 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 1000996 on processor 0 +I0114 17:06:50.382237 754763 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 4099077 +I0114 17:06:50.382735 754763 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 17:07:08.812763 754763 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 17:07:59.667965 754763 element_impl.hpp:199] creating element u : u +I0114 17:08:09.036773 754763 element_impl.hpp:199] creating element {x+y+z,x+y+z,x+y+z}:x:y:z : u +I0114 17:08:09.042359 754763 exporterimpl.hpp:219] [Exporter] format : ensightgold +I0114 17:08:09.042375 754763 exporterimpl.hpp:220] [Exporter] N : 1 +I0114 17:08:18.851001 754763 partitionio.hpp:319] writing mesh in HDF5 format in /data/scratch/cladellash/feelppdb/app-feelpp-io/io/e354e552/ThermalBridgesENISO10211/mesh_0.h5 +I0114 17:08:31.519721 754763 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 17:08:31.767019 754763 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 17:08:31.767046 754763 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 17:08:31.779695 754763 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 1000996 on processor 0 +I0114 17:08:39.605791 754763 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 171236 +I0114 17:08:39.605880 754763 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 17:08:48.339524 754763 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 17:08:58.991531 754763 element_impl.hpp:199] creating element u : u +I0114 17:09:22.207470 754763 element_impl.hpp:199] creating element uV : u + +---- +== feelpp_app_io.WARNING + +[source,bash] +---- +Log file created at: 2026/01/14 17:05:55 +Running on machine: gaya4 +Log line format: [IWEF]mmdd hh:mm:ss.uuuuuu threadid file:line] msg +W0114 17:05:55.853724 754763 doftable.hpp:2587] TODO: finish implementation of this case below +W0114 17:07:08.812763 754763 doftable.hpp:2587] TODO: finish implementation of this case below +W0114 17:08:48.339524 754763 doftable.hpp:2587] TODO: finish implementation of this case below + +---- + diff --git a/tmp/results/feelpp_app_io/ThermalBridgesENISO10211/gaya/2026_01_14T16_47_36/logs/e5113e83.adoc b/tmp/results/feelpp_app_io/ThermalBridgesENISO10211/gaya/2026_01_14T16_47_36/logs/e5113e83.adoc new file mode 100644 index 0000000..c7d8eb7 --- /dev/null +++ b/tmp/results/feelpp_app_io/ThermalBridgesENISO10211/gaya/2026_01_14T16_47_36/logs/e5113e83.adoc @@ -0,0 +1,206 @@ += ReFrame logs + +== ReFrame scheduler script + +[source,bash] +---- +#!/bin/bash +#SBATCH --job-name="rfm_RegressionTest_e5113e83" +#SBATCH --ntasks=16 +#SBATCH --ntasks-per-node=16 +#SBATCH --cpus-per-task=1 +#SBATCH --output=rfm_job.out +#SBATCH --error=rfm_job.err +#SBATCH --exclusive +#SBATCH --partition=public +#SBATCH --threads-per-core=1 +#SBATCH --time=0-00:15:00 +source /etc/profile.d/modules.sh +export PATH=/opt/apptainer/latest/bin/:$PATH +srun --cpus-per-task=1 apptainer exec -B"/data/home/cladellash/actions-runner/_work/apps-feelpp/apps-feelpp/reframe/stage/gaya/public/default/RegressionTest_e5113e83:/rfm_workdir" --home /data/scratch/cladellash/feelppdb --bind /data/scratch/cladellash/feelppdb/input_data/:/input_data --env OMP_NUM_THREADS=1 --sharens --bind /opt/:/opt/ --bind /data/:/data/ /data/scratch/cladellash/images//apps-feelpp.sif feelpp_app_io --directory /data/scratch/cladellash/feelppdb/app-feelpp-io/io/e5113e83/ThermalBridgesENISO10211 --discretization P1 --repository.append.np 0 --gmsh.filename /input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M1/case3_p16.json --nrun 1 + +---- + +== ReFrame error log + +[source,bash] +---- +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + + +---- + +== ReFrame output log + +[source,bash] +---- +[ Starting Feel++ ] application O version 0.111.0-preview.120 date 2026-Jan-14 +[feelpp] create Feel++ root repository: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/e5113e83/ThermalBridgesENISO10211 + +[feelpp] create Feel++ geo repository: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/e5113e83/ThermalBridgesENISO10211/geo + +[feelpp] create Feel++ expressions directory: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/e5113e83/ThermalBridgesENISO10211/exprs + +[feelpp] create Feel++ logs directory: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/e5113e83/ThermalBridgesENISO10211/logs + + . O files are stored in /data/scratch/cladellash/feelppdb/app-feelpp-io/io/e5113e83/ThermalBridgesENISO10211/ + .. logfiles :/data/scratch/cladellash/feelppdb/app-feelpp-io/io/e5113e83/ThermalBridgesENISO10211/logs +[loadMesh] Loading mesh in format json+h5: "/input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M1/case3_p16.json" +[loadMesh] Time : 1.54415s + [create function space] Time : 0.773459s + [create vectorial function space] Time : 1.84527s + [save field] Time : 0.0383504s + [save vector field] Time : 0.0493459s + [save mesh] Time : 0.277212s + [export time] Time : 1.61171s +Time load mesh 1.54415 +Time load create function space 0.773459 +Time load create vectorial function space 1.84527 +Time save mesh 0.277212 +Time save field 0.0383504 +Time save vector field 0.0493459 +Time to export 1.61171 ++----------------------------------------------------------------------------------------------------------------------------------------------------+ +| O | ++----------------------------------------------------------------------------------------------------------------------------------------------------+ +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | +| | logs | /data/scratch/cladellash/feelppdb/app-feelpp-io/io/e5113e83/ThermalBridgesENISO10211/logs | | +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | +| | journal | /data/scratch/cladellash/feelppdb/app-feelpp-io/io/e5113e83/ThermalBridgesENISO10211/journal.json | | +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | +| | directories | +------------------------------------------------------------------------------------------------------------------------------+ | | +| | | | /data/scratch/cladellash/feelppdb/app-feelpp-io/io/e5113e83/ThermalBridgesENISO10211/ | | | +| | | +------------------------------------------------------------------------------------------------------------------------------+ | | +| | | | /data/home/cladellash/actions-runner/_work/apps-feelpp/apps-feelpp/reframe/stage/gaya/public/default/RegressionTest_e5113e83 | | | +| | | +------------------------------------------------------------------------------------------------------------------------------+ | | +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | ++----------------------------------------------------------------------------------------------------------------------------------------------------+ + +[ Stopping Feel++ ] application O execution time 7.82946s + +---- + +== feelpp_app_io.INFO + +[source,bash] +---- +Log file created at: 2026/01/14 16:48:48 +Running on machine: gaya1 +Log line format: [IWEF]mmdd hh:mm:ss.uuuuuu threadid file:line] msg +I0114 16:48:48.024947 937414 environment.cpp:1708] File /input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M1/case3_p16.json found +I0114 16:48:48.026700 937414 loadmesh.hpp:246] Loading mesh in json+h5 format "/input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M1/case3_p16.json" +I0114 16:48:48.108126 937414 partitionio.hpp:1134] read stat points 232151,14615,0 +I0114 16:48:48.108142 937414 partitionio.hpp:1137] read stat elements 1195712,76833,0 +I0114 16:48:48.108144 937414 partitionio.hpp:1140] read stat ghost_elements 137220,11039,0 +I0114 16:48:48.108146 937414 partitionio.hpp:1143] read stat marked_faces 94934,4783,0 +I0114 16:48:48.108147 937414 partitionio.hpp:1146] read stat marked_edges 0,0,0 +I0114 16:48:48.108150 937414 partitionio.hpp:1149] read stat marked_points 0,0,0 +I0114 16:48:48.109064 937414 partitionio.hpp:1168] loaded points_ids:1x232151 +I0114 16:48:48.110869 937414 partitionio.hpp:1170] loaded points_coords:1x696453 +I0114 16:48:48.187114 937414 partitionio.hpp:1267] loaded elements:1x5978560 +I0114 16:48:48.307752 937414 partitionio.hpp:1373] loaded ghost_elements:1x137220 +I0114 16:48:48.331179 937414 partitionio.hpp:1569] loaded marked_subentities:1x379736 +I0114 16:48:48.428979 937414 meshimpl.hpp:1051] We have 4783 faces in the database +I0114 16:48:48.628684 937414 meshimpl.hpp:1325] We have now 158076 faces in the mesh +I0114 16:48:49.314162 937414 meshimpl.hpp:1863] update boundary points... +I0114 16:48:49.325382 937414 meshimpl.hpp:1883] update boundary elements... +I0114 16:48:49.537617 937414 meshimpl.hpp:524] h average : 0.0325846 +I0114 16:48:49.537688 937414 meshimpl.hpp:525] h min : 0.0175455 +I0114 16:48:49.537689 937414 meshimpl.hpp:526] h max : 0.044348 +I0114 16:48:49.543008 937414 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 16:48:49.558022 937414 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 16:48:49.558030 937414 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 16:48:49.558781 937414 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 65794 on processor 0 +I0114 16:48:49.759373 937414 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 12449 +I0114 16:48:49.759404 937414 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 16:48:50.038093 937414 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 16:48:50.317574 937414 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 16:48:50.323050 937414 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 16:48:50.323058 937414 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 16:48:50.323915 937414 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 65794 on processor 0 +I0114 16:48:50.794625 937414 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 37347 +I0114 16:48:50.794667 937414 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 16:48:51.141876 937414 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 16:48:52.162930 937414 element_impl.hpp:199] creating element u : u +I0114 16:48:52.281209 937414 element_impl.hpp:199] creating element {x+y+z,x+y+z,x+y+z}:x:y:z : u +I0114 16:48:52.281256 937414 exporterimpl.hpp:219] [Exporter] format : ensightgold +I0114 16:48:52.281258 937414 exporterimpl.hpp:220] [Exporter] N : 1 +I0114 16:48:52.388901 937414 partitionio.hpp:319] writing mesh in HDF5 format in /data/scratch/cladellash/feelppdb/app-feelpp-io/io/e5113e83/ThermalBridgesENISO10211/mesh_0.h5 +I0114 16:48:52.652921 937414 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 16:48:52.662377 937414 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 16:48:52.662387 937414 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 16:48:52.663555 937414 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 65794 on processor 0 +I0114 16:48:52.861146 937414 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 12449 +I0114 16:48:52.861184 937414 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 16:48:53.031463 937414 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 16:48:53.278823 937414 element_impl.hpp:199] creating element u : u +I0114 16:48:53.388995 937414 element_impl.hpp:199] creating element uV : u +I0114 16:48:53.389026 937414 element_impl.hpp:199] creating element uV : u +I0114 16:48:53.389034 937414 element_impl.hpp:199] creating element uV : u +I0114 16:48:53.392298 937414 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 16:48:53.397106 937414 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 16:48:53.397117 937414 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 16:48:53.398334 937414 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 65794 on processor 0 +I0114 16:48:53.569787 937414 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 12449 +I0114 16:48:53.569818 937414 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 16:48:53.763994 937414 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 16:48:54.535620 937414 exporterensightgold_impl.hpp:1250] writing part 1 +I0114 16:48:54.626226 937414 exporterensightgold_impl.hpp:1250] writing part 2 +I0114 16:48:54.659168 937414 exporterensightgold_impl.hpp:1250] writing part 3 +I0114 16:48:54.686676 937414 exporterensightgold_impl.hpp:1250] writing part 4 +I0114 16:48:54.705011 937414 exporterensightgold_impl.hpp:1250] writing part 5 +I0114 16:48:54.712535 937414 exporterensightgold_impl.hpp:1250] writing part 6 +I0114 16:48:54.721779 937414 exporterensightgold_impl.hpp:1376] ExporterEnsightGold::writeVariableFiles Nodal: 2 +I0114 16:48:54.721784 937414 exporterensightgold_impl.hpp:1377] ExporterEnsightGold::writeVariableFiles Element: 0 +I0114 16:48:55.529865 937414 environment.cpp:2423] Environment::clearSomeMemory before: PETSC get current memory usage (resident memory): 648020 KBytes 648.02 MBytes 0.64802 GBytes +I0114 16:48:55.529881 937414 environment.cpp:2428] Environment::clearSomeMemory before: PETSC get current PETSC Malloc usage: 0 KBytes 0 MBytes 0 GBytes +I0114 16:48:55.529887 937414 environment.cpp:2430] Environment::clearSomeMemory before: PETSC get maximum PETSC Malloc usage(largest memory ever used so far): 0 KBytes 0 MBytes 0 GBytes +I0114 16:48:55.530073 937414 environment.cpp:2423] Environment::clearSomeMemory after: PETSC get current memory usage (resident memory): 648020 KBytes 648.02 MBytes 0.64802 GBytes +I0114 16:48:55.530081 937414 environment.cpp:2428] Environment::clearSomeMemory after: PETSC get current PETSC Malloc usage: 0 KBytes 0 MBytes 0 GBytes +I0114 16:48:55.530083 937414 environment.cpp:2430] Environment::clearSomeMemory after: PETSC get maximum PETSC Malloc usage(largest memory ever used so far): 0 KBytes 0 MBytes 0 GBytes + +---- +== feelpp_app_io.WARNING + +[source,bash] +---- +Log file created at: 2026/01/14 16:48:50 +Running on machine: gaya1 +Log line format: [IWEF]mmdd hh:mm:ss.uuuuuu threadid file:line] msg +W0114 16:48:50.038093 937414 doftable.hpp:2587] TODO: finish implementation of this case below +W0114 16:48:51.141876 937414 doftable.hpp:2587] TODO: finish implementation of this case below +W0114 16:48:53.031463 937414 doftable.hpp:2587] TODO: finish implementation of this case below +W0114 16:48:53.763994 937414 doftable.hpp:2587] TODO: finish implementation of this case below + +---- + diff --git a/tmp/results/feelpp_app_io/ThermalBridgesENISO10211/gaya/2026_01_14T16_47_36/logs/eaa88b74.adoc b/tmp/results/feelpp_app_io/ThermalBridgesENISO10211/gaya/2026_01_14T16_47_36/logs/eaa88b74.adoc new file mode 100644 index 0000000..79185ab --- /dev/null +++ b/tmp/results/feelpp_app_io/ThermalBridgesENISO10211/gaya/2026_01_14T16_47_36/logs/eaa88b74.adoc @@ -0,0 +1,302 @@ += ReFrame logs + +== ReFrame scheduler script + +[source,bash] +---- +#!/bin/bash +#SBATCH --job-name="rfm_RegressionTest_eaa88b74" +#SBATCH --ntasks=64 +#SBATCH --ntasks-per-node=64 +#SBATCH --cpus-per-task=1 +#SBATCH --output=rfm_job.out +#SBATCH --error=rfm_job.err +#SBATCH --exclusive +#SBATCH --partition=public +#SBATCH --threads-per-core=1 +#SBATCH --time=0-00:15:00 +source /etc/profile.d/modules.sh +export PATH=/opt/apptainer/latest/bin/:$PATH +srun --cpus-per-task=1 apptainer exec -B"/data/home/cladellash/actions-runner/_work/apps-feelpp/apps-feelpp/reframe/stage/gaya/public/default/RegressionTest_eaa88b74:/rfm_workdir" --home /data/scratch/cladellash/feelppdb --bind /data/scratch/cladellash/feelppdb/input_data/:/input_data --env OMP_NUM_THREADS=1 --sharens --bind /opt/:/opt/ --bind /data/:/data/ /data/scratch/cladellash/images//apps-feelpp.sif feelpp_app_io --directory /data/scratch/cladellash/feelppdb/app-feelpp-io/io/eaa88b74/ThermalBridgesENISO10211 --discretization P1 --repository.append.np 0 --gmsh.filename /input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M3/case3_p64.json --nrun 1 + +---- + +== ReFrame error log + +[source,bash] +---- +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + + +---- + +== ReFrame output log + +[source,bash] +---- +[ Starting Feel++ ] application O version 0.111.0-preview.120 date 2026-Jan-14 +[feelpp] create Feel++ root repository: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/eaa88b74/ThermalBridgesENISO10211 + +[feelpp] create Feel++ geo repository: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/eaa88b74/ThermalBridgesENISO10211/geo + +[feelpp] create Feel++ expressions directory: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/eaa88b74/ThermalBridgesENISO10211/exprs + +[feelpp] create Feel++ logs directory: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/eaa88b74/ThermalBridgesENISO10211/logs + + . O files are stored in /data/scratch/cladellash/feelppdb/app-feelpp-io/io/eaa88b74/ThermalBridgesENISO10211/ + .. logfiles :/data/scratch/cladellash/feelppdb/app-feelpp-io/io/eaa88b74/ThermalBridgesENISO10211/logs +[loadMesh] Loading mesh in format json+h5: "/input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M3/case3_p64.json" +[loadMesh] Time : 33.7726s + [create function space] Time : 26.4429s + [create vectorial function space] Time : 48.069s + [save field] Time : 0.515196s + [save vector field] Time : 0.967567s + [save mesh] Time : 10.7614s + [export time] Time : 39.9009s +Time load mesh 33.7726 +Time load create function space 26.4429 +Time load create vectorial function space 48.069 +Time save mesh 10.7614 +Time save field 0.515196 +Time save vector field 0.967567 +Time to export 39.9009 ++----------------------------------------------------------------------------------------------------------------------------------------------------+ +| O | ++----------------------------------------------------------------------------------------------------------------------------------------------------+ +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | +| | logs | /data/scratch/cladellash/feelppdb/app-feelpp-io/io/eaa88b74/ThermalBridgesENISO10211/logs | | +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | +| | journal | /data/scratch/cladellash/feelppdb/app-feelpp-io/io/eaa88b74/ThermalBridgesENISO10211/journal.json | | +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | +| | directories | +------------------------------------------------------------------------------------------------------------------------------+ | | +| | | | /data/scratch/cladellash/feelppdb/app-feelpp-io/io/eaa88b74/ThermalBridgesENISO10211/ | | | +| | | +------------------------------------------------------------------------------------------------------------------------------+ | | +| | | | /data/home/cladellash/actions-runner/_work/apps-feelpp/apps-feelpp/reframe/stage/gaya/public/default/RegressionTest_eaa88b74 | | | +| | | +------------------------------------------------------------------------------------------------------------------------------+ | | +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | ++----------------------------------------------------------------------------------------------------------------------------------------------------+ + +[ Stopping Feel++ ] application O execution time 203.139s + +---- + +== feelpp_app_io.INFO + +[source,bash] +---- +Log file created at: 2026/01/14 17:04:22 +Running on machine: gaya5 +Log line format: [IWEF]mmdd hh:mm:ss.uuuuuu threadid file:line] msg +I0114 17:04:22.127456 716367 environment.cpp:1708] File /input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M3/case3_p64.json found +I0114 17:04:22.128906 716367 loadmesh.hpp:246] Loading mesh in json+h5 format "/input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M3/case3_p64.json" +I0114 17:04:22.259881 716367 partitionio.hpp:1134] read stat points 11850574,183334,0 +I0114 17:04:22.259902 716367 partitionio.hpp:1137] read stat elements 68915492,1068529,0 +I0114 17:04:22.259904 716367 partitionio.hpp:1140] read stat ghost_elements 4928293,67533,0 +I0114 17:04:22.259907 716367 partitionio.hpp:1143] read stat marked_faces 1561612,26399,0 +I0114 17:04:22.259908 716367 partitionio.hpp:1146] read stat marked_edges 0,0,0 +I0114 17:04:22.259909 716367 partitionio.hpp:1149] read stat marked_points 0,0,0 +I0114 17:04:22.262668 716367 partitionio.hpp:1168] loaded points_ids:1x11850574 +I0114 17:04:22.265010 716367 partitionio.hpp:1170] loaded points_coords:1x35551722 +I0114 17:04:24.012459 716367 partitionio.hpp:1267] loaded elements:1x344577460 +I0114 17:04:31.270299 716367 partitionio.hpp:1373] loaded ghost_elements:1x4928293 +I0114 17:04:31.455516 716367 partitionio.hpp:1569] loaded marked_subentities:1x6246448 +I0114 17:04:32.577158 716367 meshimpl.hpp:1051] We have 26399 faces in the database +I0114 17:04:36.802204 716367 meshimpl.hpp:1325] We have now 2162072 faces in the mesh +I0114 17:04:50.713665 716367 meshimpl.hpp:1863] update boundary points... +I0114 17:04:50.875978 716367 meshimpl.hpp:1883] update boundary elements... +I0114 17:04:55.834410 716367 meshimpl.hpp:524] h average : 0.00818335 +I0114 17:04:55.834800 716367 meshimpl.hpp:525] h min : 0.00477946 +I0114 17:04:55.834805 716367 meshimpl.hpp:526] h max : 0.0116148 +I0114 17:04:55.881727 716367 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 17:04:56.264846 716367 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 17:04:56.264859 716367 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 17:04:56.275245 716367 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 1000996 on processor 0 +I0114 17:05:05.339915 716367 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 171236 +I0114 17:05:05.340039 716367 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 17:05:10.741485 716367 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 17:05:22.338532 716367 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 17:05:22.441284 716367 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 17:05:22.441299 716367 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 17:05:22.455188 716367 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 1000996 on processor 0 +I0114 17:05:36.051196 716367 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 513708 +I0114 17:05:36.051630 716367 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 17:05:44.517217 716367 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 17:06:10.407722 716367 element_impl.hpp:199] creating element u : u +I0114 17:06:14.580755 716367 element_impl.hpp:199] creating element {x+y+z,x+y+z,x+y+z}:x:y:z : u +I0114 17:06:14.580941 716367 exporterimpl.hpp:219] [Exporter] format : ensightgold +I0114 17:06:14.580945 716367 exporterimpl.hpp:220] [Exporter] N : 1 +I0114 17:06:16.419773 716367 partitionio.hpp:319] writing mesh in HDF5 format in /data/scratch/cladellash/feelppdb/app-feelpp-io/io/eaa88b74/ThermalBridgesENISO10211/mesh_0.h5 +I0114 17:06:26.871901 716367 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 17:06:27.014663 716367 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 17:06:27.014686 716367 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 17:06:27.034535 716367 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 1000996 on processor 0 +I0114 17:06:34.616791 716367 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 171236 +I0114 17:06:34.616850 716367 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 17:06:38.536299 716367 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 17:06:48.950495 716367 element_impl.hpp:199] creating element u : u +I0114 17:06:52.356403 716367 element_impl.hpp:199] creating element uV : u +I0114 17:06:52.356535 716367 element_impl.hpp:199] creating element uV : u +I0114 17:06:52.356662 716367 element_impl.hpp:199] creating element uV : u +I0114 17:06:52.414875 716367 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 17:06:52.533388 716367 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 17:06:52.533404 716367 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 17:06:52.555891 716367 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 1000996 on processor 0 +I0114 17:07:00.219175 716367 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 171236 +I0114 17:07:00.219234 716367 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 17:07:03.843775 716367 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 17:07:25.380798 716367 exporterensightgold_impl.hpp:1250] writing part 1 +I0114 17:07:26.813695 716367 exporterensightgold_impl.hpp:1250] writing part 2 +I0114 17:07:27.424767 716367 exporterensightgold_impl.hpp:1250] writing part 3 +I0114 17:07:28.773164 716367 exporterensightgold_impl.hpp:1250] writing part 4 +I0114 17:07:28.853588 716367 exporterensightgold_impl.hpp:1250] writing part 5 +I0114 17:07:28.976248 716367 exporterensightgold_impl.hpp:1250] writing part 6 +I0114 17:07:29.015488 716367 exporterensightgold_impl.hpp:1376] ExporterEnsightGold::writeVariableFiles Nodal: 2 +I0114 17:07:29.015498 716367 exporterensightgold_impl.hpp:1377] ExporterEnsightGold::writeVariableFiles Element: 0 +I0114 17:07:44.457427 716367 environment.cpp:2423] Environment::clearSomeMemory before: PETSC get current memory usage (resident memory): 6.32291e+06 KBytes 6322.91 MBytes 6.32291 GBytes +I0114 17:07:44.457464 716367 environment.cpp:2428] Environment::clearSomeMemory before: PETSC get current PETSC Malloc usage: 0 KBytes 0 MBytes 0 GBytes +I0114 17:07:44.457474 716367 environment.cpp:2430] Environment::clearSomeMemory before: PETSC get maximum PETSC Malloc usage(largest memory ever used so far): 0 KBytes 0 MBytes 0 GBytes +I0114 17:07:44.457511 716367 environment.cpp:2423] Environment::clearSomeMemory after: PETSC get current memory usage (resident memory): 6.32291e+06 KBytes 6322.91 MBytes 6.32291 GBytes +I0114 17:07:44.457515 716367 environment.cpp:2428] Environment::clearSomeMemory after: PETSC get current PETSC Malloc usage: 0 KBytes 0 MBytes 0 GBytes +I0114 17:07:44.457517 716367 environment.cpp:2430] Environment::clearSomeMemory after: PETSC get maximum PETSC Malloc usage(largest memory ever used so far): 0 KBytes 0 MBytes 0 GBytes + +---- +== feelpp_app_io.WARNING + +[source,bash] +---- +Log file created at: 2026/01/14 17:05:10 +Running on machine: gaya5 +Log line format: [IWEF]mmdd hh:mm:ss.uuuuuu threadid file:line] msg +W0114 17:05:10.741485 716367 doftable.hpp:2587] TODO: finish implementation of this case below +W0114 17:05:44.517217 716367 doftable.hpp:2587] TODO: finish implementation of this case below +W0114 17:06:38.536299 716367 doftable.hpp:2587] TODO: finish implementation of this case below +W0114 17:07:03.843775 716367 doftable.hpp:2587] TODO: finish implementation of this case below + +---- + diff --git a/tmp/results/feelpp_app_io/ThermalBridgesENISO10211/gaya/2026_01_14T16_47_36/logs/eeaf983a.adoc b/tmp/results/feelpp_app_io/ThermalBridgesENISO10211/gaya/2026_01_14T16_47_36/logs/eeaf983a.adoc new file mode 100644 index 0000000..376be06 --- /dev/null +++ b/tmp/results/feelpp_app_io/ThermalBridgesENISO10211/gaya/2026_01_14T16_47_36/logs/eeaf983a.adoc @@ -0,0 +1,190 @@ += ReFrame logs + +== ReFrame scheduler script + +[source,bash] +---- +#!/bin/bash +#SBATCH --job-name="rfm_RegressionTest_eeaf983a" +#SBATCH --ntasks=8 +#SBATCH --ntasks-per-node=8 +#SBATCH --cpus-per-task=1 +#SBATCH --output=rfm_job.out +#SBATCH --error=rfm_job.err +#SBATCH --exclusive +#SBATCH --partition=public +#SBATCH --threads-per-core=1 +#SBATCH --time=0-00:15:00 +source /etc/profile.d/modules.sh +export PATH=/opt/apptainer/latest/bin/:$PATH +srun --cpus-per-task=1 apptainer exec -B"/data/home/cladellash/actions-runner/_work/apps-feelpp/apps-feelpp/reframe/stage/gaya/public/default/RegressionTest_eeaf983a:/rfm_workdir" --home /data/scratch/cladellash/feelppdb --bind /data/scratch/cladellash/feelppdb/input_data/:/input_data --env OMP_NUM_THREADS=1 --sharens --bind /opt/:/opt/ --bind /data/:/data/ /data/scratch/cladellash/images//apps-feelpp.sif feelpp_app_io --directory /data/scratch/cladellash/feelppdb/app-feelpp-io/io/eeaf983a/ThermalBridgesENISO10211 --discretization P2 --repository.append.np 0 --gmsh.filename /input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M2/case3_p8.json --nrun 1 + +---- + +== ReFrame error log + +[source,bash] +---- +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + +Authorization required, but no authorization protocol specified + + +---- + +== ReFrame output log + +[source,bash] +---- +[ Starting Feel++ ] application O version 0.111.0-preview.120 date 2026-Jan-14 +[feelpp] create Feel++ root repository: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/eeaf983a/ThermalBridgesENISO10211 + +[feelpp] create Feel++ geo repository: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/eeaf983a/ThermalBridgesENISO10211/geo + +[feelpp] create Feel++ expressions directory: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/eeaf983a/ThermalBridgesENISO10211/exprs + +[feelpp] create Feel++ logs directory: /data/scratch/cladellash/feelppdb/app-feelpp-io/io/eeaf983a/ThermalBridgesENISO10211/logs + + . O files are stored in /data/scratch/cladellash/feelppdb/app-feelpp-io/io/eeaf983a/ThermalBridgesENISO10211/ + .. logfiles :/data/scratch/cladellash/feelppdb/app-feelpp-io/io/eeaf983a/ThermalBridgesENISO10211/logs +[loadMesh] Loading mesh in format json+h5: "/input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M2/case3_p8.json" +[loadMesh] Time : 20.0719s + [create function space] Time : 41.759s + [create vectorial function space] Time : 79.8764s + [save field] Time : 0.288473s + [save vector field] Time : 0.768748s + [save mesh] Time : 2.36422s + [export time] Time : 50.849s +Time load mesh 20.0719 +Time load create function space 41.759 +Time load create vectorial function space 79.8764 +Time save mesh 2.36422 +Time save field 0.288473 +Time save vector field 0.768748 +Time to export 50.849 ++----------------------------------------------------------------------------------------------------------------------------------------------------+ +| O | ++----------------------------------------------------------------------------------------------------------------------------------------------------+ +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | +| | logs | /data/scratch/cladellash/feelppdb/app-feelpp-io/io/eeaf983a/ThermalBridgesENISO10211/logs | | +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | +| | journal | /data/scratch/cladellash/feelppdb/app-feelpp-io/io/eeaf983a/ThermalBridgesENISO10211/journal.json | | +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | +| | directories | +------------------------------------------------------------------------------------------------------------------------------+ | | +| | | | /data/scratch/cladellash/feelppdb/app-feelpp-io/io/eeaf983a/ThermalBridgesENISO10211/ | | | +| | | +------------------------------------------------------------------------------------------------------------------------------+ | | +| | | | /data/home/cladellash/actions-runner/_work/apps-feelpp/apps-feelpp/reframe/stage/gaya/public/default/RegressionTest_eeaf983a | | | +| | | +------------------------------------------------------------------------------------------------------------------------------+ | | +| +-------------+----------------------------------------------------------------------------------------------------------------------------------+ | ++----------------------------------------------------------------------------------------------------------------------------------------------------+ + +[ Stopping Feel++ ] application O execution time 234.312s + +---- + +== feelpp_app_io.INFO + +[source,bash] +---- +Log file created at: 2026/01/14 17:07:39 +Running on machine: gaya3 +Log line format: [IWEF]mmdd hh:mm:ss.uuuuuu threadid file:line] msg +I0114 17:07:39.461426 755508 environment.cpp:1708] File /input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M2/case3_p8.json found +I0114 17:07:39.478745 755508 loadmesh.hpp:246] Loading mesh in json+h5 format "/input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M2/case3_p8.json" +I0114 17:07:39.499428 755508 partitionio.hpp:1134] read stat points 1493168,189817,0 +I0114 17:07:39.499436 755508 partitionio.hpp:1137] read stat elements 8537206,1074004,0 +I0114 17:07:39.499439 755508 partitionio.hpp:1140] read stat ghost_elements 348013,50355,0 +I0114 17:07:39.499440 755508 partitionio.hpp:1143] read stat marked_faces 374422,52190,0 +I0114 17:07:39.499441 755508 partitionio.hpp:1146] read stat marked_edges 0,0,0 +I0114 17:07:39.499442 755508 partitionio.hpp:1149] read stat marked_points 0,0,0 +I0114 17:07:39.499828 755508 partitionio.hpp:1168] loaded points_ids:1x1493168 +I0114 17:07:39.500221 755508 partitionio.hpp:1170] loaded points_coords:1x4479504 +I0114 17:07:39.697695 755508 partitionio.hpp:1267] loaded elements:1x42686030 +I0114 17:07:41.335222 755508 partitionio.hpp:1373] loaded ghost_elements:1x348013 +I0114 17:07:41.404933 755508 partitionio.hpp:1569] loaded marked_subentities:1x1497688 +I0114 17:07:42.114630 755508 meshimpl.hpp:1051] We have 52190 faces in the database +I0114 17:07:45.804447 755508 meshimpl.hpp:1325] We have now 2184119 faces in the mesh +I0114 17:07:56.230621 755508 meshimpl.hpp:1863] update boundary points... +I0114 17:07:56.353256 755508 meshimpl.hpp:1883] update boundary elements... +I0114 17:07:59.513345 755508 meshimpl.hpp:524] h average : 0.01632 +I0114 17:07:59.513393 755508 meshimpl.hpp:525] h min : 0.0098099 +I0114 17:07:59.513396 755508 meshimpl.hpp:526] h max : 0.0226452 +I0114 17:07:59.537531 755508 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 17:07:59.831849 755508 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 17:07:59.831867 755508 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 17:07:59.840565 755508 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 1023649 on processor 0 +I0114 17:08:15.732504 755508 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 1418739 +I0114 17:08:15.732966 755508 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 17:08:22.685742 755508 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 17:08:41.343329 755508 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 17:08:41.452713 755508 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 17:08:41.452730 755508 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 17:08:41.464398 755508 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 1023649 on processor 0 +I0114 17:09:09.367535 755508 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 4256217 +I0114 17:09:09.367902 755508 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 17:09:20.290072 755508 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 17:10:01.220959 755508 element_impl.hpp:199] creating element u : u +I0114 17:10:04.537002 755508 element_impl.hpp:199] creating element {x+y+z,x+y+z,x+y+z}:x:y:z : u +I0114 17:10:04.540484 755508 exporterimpl.hpp:219] [Exporter] format : ensightgold +I0114 17:10:04.540490 755508 exporterimpl.hpp:220] [Exporter] N : 1 +I0114 17:10:05.756384 755508 partitionio.hpp:319] writing mesh in HDF5 format in /data/scratch/cladellash/feelppdb/app-feelpp-io/io/eeaf983a/ThermalBridgesENISO10211/mesh_0.h5 +I0114 17:10:07.980123 755508 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 17:10:08.169780 755508 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 17:10:08.169791 755508 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 17:10:08.182365 755508 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 1023649 on processor 0 +I0114 17:10:14.214349 755508 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 180513 +I0114 17:10:14.214428 755508 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 17:10:16.779834 755508 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 17:10:24.636392 755508 element_impl.hpp:199] creating element u : u +I0114 17:10:27.491885 755508 element_impl.hpp:199] creating element uV : u +I0114 17:10:27.492079 755508 element_impl.hpp:199] creating element uV : u +I0114 17:10:27.492311 755508 element_impl.hpp:199] creating element uV : u +I0114 17:10:27.518208 755508 worldcomm.cpp:882] [rank 0] [DofTable::build] starts, has mesh support: false +I0114 17:10:27.602497 755508 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] starts, dof_indices empty: true +I0114 17:10:27.602506 755508 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] allocation done +I0114 17:10:27.617264 755508 worldcomm.cpp:882] [rank 0] [DofTable::buildDofMap] n_elts = 1023649 on processor 0 +I0114 17:10:43.335881 755508 worldcomm.cpp:882] [rank 0] [builddofmap - 0] dof generation nLocalDof : 1418739 +I0114 17:10:43.336004 755508 worldcomm.cpp:882] [rank 0] [DofTable::buildGhostDofMap rank=0] starts. hasMeshSupport: false +W0114 17:10:48.241909 755508 doftable.hpp:2587] TODO: finish implementation of this case below +I0114 17:11:15.799713 755508 exporterensightgold_impl.hpp:1250] writing part 1 +I0114 17:11:16.064813 755508 exporterensightgold_impl.hpp:1250] writing part 2 +I0114 17:11:16.392108 755508 exporterensightgold_impl.hpp:1250] writing part 3 +I0114 17:11:16.556110 755508 exporterensightgold_impl.hpp:1250] writing part 4 +I0114 17:11:16.617380 755508 exporterensightgold_impl.hpp:1250] writing part 5 +I0114 17:11:16.654398 755508 exporterensightgold_impl.hpp:1250] writing part 6 +I0114 17:11:16.662956 755508 exporterensightgold_impl.hpp:1376] ExporterEnsightGold::writeVariableFiles Nodal: 2 +I0114 17:11:16.662962 755508 exporterensightgold_impl.hpp:1377] ExporterEnsightGold::writeVariableFiles Element: 0 +I0114 17:11:33.483753 755508 environment.cpp:2423] Environment::clearSomeMemory before: PETSC get current memory usage (resident memory): 9.89017e+06 KBytes 9890.17 MBytes 9.89017 GBytes +I0114 17:11:33.483781 755508 environment.cpp:2428] Environment::clearSomeMemory before: PETSC get current PETSC Malloc usage: 0 KBytes 0 MBytes 0 GBytes +I0114 17:11:33.483789 755508 environment.cpp:2430] Environment::clearSomeMemory before: PETSC get maximum PETSC Malloc usage(largest memory ever used so far): 0 KBytes 0 MBytes 0 GBytes +I0114 17:11:33.483824 755508 environment.cpp:2423] Environment::clearSomeMemory after: PETSC get current memory usage (resident memory): 9.89017e+06 KBytes 9890.17 MBytes 9.89017 GBytes +I0114 17:11:33.483827 755508 environment.cpp:2428] Environment::clearSomeMemory after: PETSC get current PETSC Malloc usage: 0 KBytes 0 MBytes 0 GBytes +I0114 17:11:33.483829 755508 environment.cpp:2430] Environment::clearSomeMemory after: PETSC get maximum PETSC Malloc usage(largest memory ever used so far): 0 KBytes 0 MBytes 0 GBytes + +---- +== feelpp_app_io.WARNING + +[source,bash] +---- +Log file created at: 2026/01/14 17:08:22 +Running on machine: gaya3 +Log line format: [IWEF]mmdd hh:mm:ss.uuuuuu threadid file:line] msg +W0114 17:08:22.685742 755508 doftable.hpp:2587] TODO: finish implementation of this case below +W0114 17:09:20.290072 755508 doftable.hpp:2587] TODO: finish implementation of this case below +W0114 17:10:16.779834 755508 doftable.hpp:2587] TODO: finish implementation of this case below +W0114 17:10:48.241909 755508 doftable.hpp:2587] TODO: finish implementation of this case below + +---- + diff --git a/tmp/results/feelpp_app_io/ThermalBridgesENISO10211/gaya/2026_01_14T16_47_36/reframe_report.json b/tmp/results/feelpp_app_io/ThermalBridgesENISO10211/gaya/2026_01_14T16_47_36/reframe_report.json new file mode 100644 index 0000000..ec02c90 --- /dev/null +++ b/tmp/results/feelpp_app_io/ThermalBridgesENISO10211/gaya/2026_01_14T16_47_36/reframe_report.json @@ -0,0 +1,6425 @@ +{ + "session_info": { + "data_version": "4.2", + "hostname": "gaya", + "uuid": "9eb06b30-6ed3-4e8b-b323-2d88d4891c82", + "time_start": "20260114T164738+0100", + "time_start_unix": 1768405658.2187736, + "time_end": "20260114T172017+0100", + "time_end_unix": 1768407617.437726, + "time_elapsed": 1959.2189524173737, + "cmdline": "/data/home/cladellash/actions-runner/_work/apps-feelpp/apps-feelpp/.venv/bin/reframe -C /data/home/cladellash/actions-runner/_work/apps-feelpp/apps-feelpp/.venv/lib/python3.12/site-packages/feelpp/benchmarking/reframe/config/machineConfigs/gaya/reframe.py -c /data/home/cladellash/actions-runner/_work/apps-feelpp/apps-feelpp/.venv/lib/python3.12/site-packages/feelpp/benchmarking/reframe/regression.py -S report_dir_path=./reports/feelpp_app_io/ThermalBridgesENISO10211/gaya/2026_01_14T16_47_36 --system=gaya --exec-policy=async --prefix=./reframe --report-file=./reports/feelpp_app_io/ThermalBridgesENISO10211/gaya/2026_01_14T16_47_36/reframe_report.json -J time=0-00:15:00 --perflogdir=logs -r -v --exec-order=name", + "config_files": [ + "", + "/data/home/cladellash/actions-runner/_work/apps-feelpp/apps-feelpp/.venv/lib/python3.12/site-packages/feelpp/benchmarking/reframe/config/machineConfigs/gaya/reframe.py" + ], + "log_files": [ + "/tmp/rfm-v2tfgcf4.log" + ], + "prefix_output": "/data/home/cladellash/actions-runner/_work/apps-feelpp/apps-feelpp/reframe/output", + "prefix_stage": "/data/home/cladellash/actions-runner/_work/apps-feelpp/apps-feelpp/reframe/stage", + "user": "cladellash", + "version": "4.9.0", + "workdir": "/data/home/cladellash/actions-runner/_work/apps-feelpp/apps-feelpp", + "num_cases": 38, + "num_failures": 4, + "num_aborted": 0, + "num_skipped": 0 + }, + "runs": [ + { + "num_cases": 38, + "num_failures": 4, + "num_aborted": 0, + "num_skipped": 0, + "run_index": 0, + "testcases": [ + { + "build_jobid": null, + "build_stderr": null, + "build_stdout": null, + "dependencies_actual": [], + "dependencies_conceptual": [], + "environ": "default", + "fail_phase": null, + "fail_reason": null, + "filename": "/data/home/cladellash/actions-runner/_work/apps-feelpp/apps-feelpp/.venv/lib/python3.12/site-packages/feelpp/benchmarking/reframe/regression.py", + "fixture": false, + "job_completion_time": "2026-01-14T16:48:45+01:00", + "job_completion_time_unix": 1768405725.4385695, + "job_stderr": "rfm_job.err", + "job_stdout": "rfm_job.out", + 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true, + "executable": "apptainer exec -B\"/data/home/cladellash/actions-runner/_work/apps-feelpp/apps-feelpp/reframe/stage/gaya/public/default/RegressionTest_4e618e2d:/rfm_workdir\" --home /data/scratch/cladellash/feelppdb --bind /data/scratch/cladellash/feelppdb/input_data/:/input_data --env OMP_NUM_THREADS=1 --sharens --bind /opt/:/opt/ --bind /data/:/data/ /data/scratch/cladellash/images//apps-feelpp.sif feelpp_app_io --directory /data/scratch/cladellash/feelppdb/app-feelpp-io/io/4e618e2d/ThermalBridgesENISO10211 --discretization P1 --repository.append.np 0 --gmsh.filename /input_data/feelpp_toolboxes/ThermalBridgesENISO10211/partitioning/case3/M1/case3_p1.json --nrun 1", + "executable_opts": [], + "execution_policy": "async", + "extra_resources": {}, + "hashcode": "4e618e2d", + "keep_files": [], + "local": false, + "maintainers": [], + "max_pending_time": null, + "mesh": "M1", + "modules": [], + "name": "RegressionTest %tasks=1 %mesh=M1 %discretization=P1", + "num_cpus_per_task": 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\"/data/home/cladellash/actions-runner/_work/apps-feelpp/apps-feelpp/.venv/lib/python3.12/site-packages/reframe/core/hooks.py\", line 38, in _fn\n func(*args, **kwargs)\n", + " File \"/data/home/cladellash/actions-runner/_work/apps-feelpp/apps-feelpp/.venv/lib/python3.12/site-packages/feelpp/benchmarking/reframe/regression.py\", line 79, in setPerfVars\n self.scalability_handler.getPerformanceVariables(self.num_tasks)\n", + " File \"/data/home/cladellash/actions-runner/_work/apps-feelpp/apps-feelpp/.venv/lib/python3.12/site-packages/feelpp/benchmarking/reframe/scalability.py\", line 154, in getPerformanceVariables\n perf_variables.update( extractor.extract() )\n ^^^^^^^^^^^^^^^^^^^\n", + " File \"/data/home/cladellash/actions-runner/_work/apps-feelpp/apps-feelpp/.venv/lib/python3.12/site-packages/feelpp/benchmarking/reframe/scalability.py\", line 28, in extract\n columns,vars = self._extractVariables()\n ^^^^^^^^^^^^^^^^^^^^^^^^\n", + " File 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\"/data/home/cladellash/actions-runner/_work/apps-feelpp/apps-feelpp/.venv/lib/python3.12/site-packages/reframe/core/hooks.py\", line 38, in _fn\n func(*args, **kwargs)\n", + " File \"/data/home/cladellash/actions-runner/_work/apps-feelpp/apps-feelpp/.venv/lib/python3.12/site-packages/feelpp/benchmarking/reframe/regression.py\", line 79, in setPerfVars\n self.scalability_handler.getPerformanceVariables(self.num_tasks)\n", + " File \"/data/home/cladellash/actions-runner/_work/apps-feelpp/apps-feelpp/.venv/lib/python3.12/site-packages/feelpp/benchmarking/reframe/scalability.py\", line 154, in getPerformanceVariables\n perf_variables.update( extractor.extract() )\n ^^^^^^^^^^^^^^^^^^^\n", + " File \"/data/home/cladellash/actions-runner/_work/apps-feelpp/apps-feelpp/.venv/lib/python3.12/site-packages/feelpp/benchmarking/reframe/scalability.py\", line 28, in extract\n columns,vars = self._extractVariables()\n ^^^^^^^^^^^^^^^^^^^^^^^^\n", + " File \"/data/home/cladellash/actions-runner/_work/apps-feelpp/apps-feelpp/.venv/lib/python3.12/site-packages/feelpp/benchmarking/reframe/scalability.py\", line 115, in _extractVariables\n content = self._getFileContent()\n ^^^^^^^^^^^^^^^^^^^^^^\n", + " File \"/data/home/cladellash/actions-runner/_work/apps-feelpp/apps-feelpp/.venv/lib/python3.12/site-packages/feelpp/benchmarking/reframe/scalability.py\", line 78, in _getFileContent\n with open(self.filepath,\"r\") as f:\n ^^^^^^^^^^^^^^^^^^^^^^^\n" + ] + }, + "fail_severe": false, + "job_exitcode": null, + "job_nodelist": [ + "gaya6" + ], + "job_submit_time": 1768405679.8891323, + "jobid": "32850", + "system": "gaya", + "build_locally": true, + "build_time_limit": null, + "check_params": { + "tasks": 128, + "mesh": "M3", + "discretization": "P2" + }, + "descr": "", + "discretization": "P2", + "display_name": "RegressionTest %tasks=128 %mesh=M3 %discretization=P2", + "env_vars": {}, + "exclusive_access": true, + "executable": "apptainer 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_safe_call\n return fn(*args, **kwargs)\n ^^^^^^^^^^^^^^^^^^^\n", + " File \"/data/home/cladellash/actions-runner/_work/apps-feelpp/apps-feelpp/.venv/lib/python3.12/site-packages/reframe/core/hooks.py\", line 107, in _fn\n getattr(obj, h.__name__)()\n", + " File \"/data/home/cladellash/actions-runner/_work/apps-feelpp/apps-feelpp/.venv/lib/python3.12/site-packages/reframe/core/hooks.py\", line 38, in _fn\n func(*args, **kwargs)\n", + " File \"/data/home/cladellash/actions-runner/_work/apps-feelpp/apps-feelpp/.venv/lib/python3.12/site-packages/feelpp/benchmarking/reframe/regression.py\", line 79, in setPerfVars\n self.scalability_handler.getPerformanceVariables(self.num_tasks)\n", + " File \"/data/home/cladellash/actions-runner/_work/apps-feelpp/apps-feelpp/.venv/lib/python3.12/site-packages/feelpp/benchmarking/reframe/scalability.py\", line 154, in getPerformanceVariables\n perf_variables.update( extractor.extract() )\n ^^^^^^^^^^^^^^^^^^^\n", + " File 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