From 30d104b4e61c0771b40d8550a69aef9bc51b1ebc Mon Sep 17 00:00:00 2001
From: "scverse-pr-creator[bot]"
 <272303624+scverse-pr-creator[bot]@users.noreply.github.com>
Date: Mon, 13 Apr 2026 17:53:40 +0000
Subject: [PATCH 1/2] Update instance repo from cookiecutter template

---
 .cruft.json | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

diff --git a/.cruft.json b/.cruft.json
index 5d170ad..6aff214 100644
--- a/.cruft.json
+++ b/.cruft.json
@@ -1,6 +1,6 @@
 {
   "template": "/home/runner/work/cookiecutter-scverse/cookiecutter-scverse",
-  "commit": "5ff4cf19f50c028f0e78291d56ab3beb28ca357c",
+  "commit": "8cb6c364b46a4e573c203fb855673350a9ec3ac0",
   "checkout": null,
   "context": {
     "cookiecutter": {
@@ -36,7 +36,7 @@
         "trim_blocks": true
       },
       "_template": "/home/runner/work/cookiecutter-scverse/cookiecutter-scverse",
-      "_commit": "5ff4cf19f50c028f0e78291d56ab3beb28ca357c"
+      "_commit": "8cb6c364b46a4e573c203fb855673350a9ec3ac0"
     }
   },
   "directory": null

From 30c340ba0b68eb5dba45d93d2e8960fa2fc78db6 Mon Sep 17 00:00:00 2001
From: "scverse-pr-creator[bot]"
 <272303624+scverse-pr-creator[bot]@users.noreply.github.com>
Date: Mon, 13 Apr 2026 17:58:42 +0000
Subject: [PATCH 2/2] Update instance repo from cookiecutter template

---
 .pre-commit-config.yaml | 6 +++---
 1 file changed, 3 insertions(+), 3 deletions(-)

diff --git a/.pre-commit-config.yaml b/.pre-commit-config.yaml
index 401c82b..c0d3635 100644
--- a/.pre-commit-config.yaml
+++ b/.pre-commit-config.yaml
@@ -7,16 +7,16 @@ default_stages:
 minimum_pre_commit_version: 2.16.0
 repos:
   - repo: https://github.com/biomejs/pre-commit
-    rev: v2.4.10
+    rev: v2.4.11
     hooks:
       - id: biome-format
         exclude: ^\.cruft\.json$ # inconsistent indentation with cruft - file never to be modified manually.
   - repo: https://github.com/tox-dev/pyproject-fmt
-    rev: v2.21.0
+    rev: v2.21.1
     hooks:
       - id: pyproject-fmt
   - repo: https://github.com/astral-sh/ruff-pre-commit
-    rev: v0.15.9
+    rev: v0.15.10
     hooks:
       - id: ruff-check
         types_or: [python, pyi, jupyter]