From 5a4dacb1acf86b07189971205b7a9711a20a0a95 Mon Sep 17 00:00:00 2001
From: Gunjan Tailor <tailorgunjan93@gmail.com>
Date: Fri, 8 May 2026 19:44:18 +0530
Subject: [PATCH 1/2] Update backend run command in README

---
 README.md | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

diff --git a/README.md b/README.md
index a0af7e2..c6e2d08 100644
--- a/README.md
+++ b/README.md
@@ -35,7 +35,7 @@ GROQ_API_KEY=your_groq_api_key
 ### 3. Run Backend
 
 ```powershell
-python -m uvicorn backend.main:app --reload
+python -m uvicorn src.main:app --reload
 ```
 
 Backend runs at http://localhost:8000
@@ -81,4 +81,4 @@ pytest tests/ -v
 
 ## Architecture
 
-See `architecture.md` for detailed documentation.
\ No newline at end of file
+See `architecture.md` for detailed documentation.

From 9cad647c0c83c8825fe64f781d9c62cbbffcdf96 Mon Sep 17 00:00:00 2001
From: tailorgunjan93 <tailorgunjan93@gmail.com>
Date: Sun, 10 May 2026 15:21:54 +0530
Subject: [PATCH 2/2] feat: add package-lock.json to track dependencies for
 extreme-biology worktree

---
 .kilo/package-lock.json | 46 ++++++++++++++++++++---------------------
 1 file changed, 23 insertions(+), 23 deletions(-)

diff --git a/.kilo/package-lock.json b/.kilo/package-lock.json
index 83d9905..f288fc5 100644
--- a/.kilo/package-lock.json
+++ b/.kilo/package-lock.json
@@ -5,22 +5,22 @@
   "packages": {
     "": {
       "dependencies": {
-        "@kilocode/plugin": "7.2.22"
+        "@kilocode/plugin": "7.2.40"
       }
     },
     "node_modules/@kilocode/plugin": {
-      "version": "7.2.22",
-      "resolved": "https://registry.npmjs.org/@kilocode/plugin/-/plugin-7.2.22.tgz",
-      "integrity": "sha512-uS8tnoLzXAyDHHgSOvP/GhrvkKpus6i6tmWb57E4+YfgHBOO7HqF+LzV4MiC1cuGIifbMtyUEi3kZWmWdIuhhw==",
+      "version": "7.2.40",
+      "resolved": "https://registry.npmjs.org/@kilocode/plugin/-/plugin-7.2.40.tgz",
+      "integrity": "sha512-m0/5LnQdKW+FJnv9sVbri4Cqw7vq2jy5xS7hdkWO0mbyPkjROcrXklnwuHk3bi32F5InnO4DUyKrkqfMFoMDgQ==",
       "license": "MIT",
       "dependencies": {
-        "@kilocode/sdk": "7.2.22",
-        "effect": "4.0.0-beta.48",
+        "@kilocode/sdk": "7.2.40",
+        "effect": "4.0.0-beta.57",
         "zod": "4.1.8"
       },
       "peerDependencies": {
-        "@opentui/core": ">=0.1.100",
-        "@opentui/solid": ">=0.1.100"
+        "@opentui/core": ">=0.1.105",
+        "@opentui/solid": ">=0.1.105"
       },
       "peerDependenciesMeta": {
         "@opentui/core": {
@@ -32,9 +32,9 @@
       }
     },
     "node_modules/@kilocode/sdk": {
-      "version": "7.2.22",
-      "resolved": "https://registry.npmjs.org/@kilocode/sdk/-/sdk-7.2.22.tgz",
-      "integrity": "sha512-2t4VuK5rVY9o/Pck/oRJ+CxAAqnwLhRAD/i91uSabWw4POGlOHHsq2etQKFAX8kJ5zdTk/I1DLvffh7bFPPXZw==",
+      "version": "7.2.40",
+      "resolved": "https://registry.npmjs.org/@kilocode/sdk/-/sdk-7.2.40.tgz",
+      "integrity": "sha512-I/AWGE2EnM26/lWD/gf9T8QxuCB/YPZBQJ14M8D/SN4+rZKonyqz2Q6iIgQWqcX3B4LQLMWNFNh9rdvPaHN66Q==",
       "license": "MIT",
       "dependencies": {
         "cross-spawn": "7.0.6"
@@ -149,9 +149,9 @@
       }
     },
     "node_modules/effect": {
-      "version": "4.0.0-beta.48",
-      "resolved": "https://registry.npmjs.org/effect/-/effect-4.0.0-beta.48.tgz",
-      "integrity": "sha512-MMAM/ZabuNdNmgXiin+BAanQXK7qM8mlt7nfXDoJ/Gn9V8i89JlCq+2N0AiWmqFLXjGLA0u3FjiOjSOYQk5uMw==",
+      "version": "4.0.0-beta.57",
+      "resolved": "https://registry.npmjs.org/effect/-/effect-4.0.0-beta.57.tgz",
+      "integrity": "sha512-rg32VgXnLKaPRs9tbRDaZ5jxmzNY7ojXt85gSHGUTwdlbWH5Ik+OCUY2q14TXliygPGoHwCAvNWS4bQJOqf00g==",
       "license": "MIT",
       "dependencies": {
         "@standard-schema/spec": "^1.1.0",
@@ -216,9 +216,9 @@
       "license": "Apache-2.0"
     },
     "node_modules/msgpackr": {
-      "version": "1.11.10",
-      "resolved": "https://registry.npmjs.org/msgpackr/-/msgpackr-1.11.10.tgz",
-      "integrity": "sha512-iCZNq+HszvF+fC3anCm4nBmWEnbeIAfpDs6IStAEKhQ2YSgkjzVG2FF9XJqwwQh5bH3N9OUTUt4QwVN6MLMLtA==",
+      "version": "1.11.12",
+      "resolved": "https://registry.npmjs.org/msgpackr/-/msgpackr-1.11.12.tgz",
+      "integrity": "sha512-RBdJ1Un7yGlXWajrkxcSa93nvQ0w4zBf60c0yYv7YtBelP8H2FA7XsfBbMHtXKXUMUxH7zV3Zuozh+kUQWhHvg==",
       "license": "MIT",
       "optionalDependencies": {
         "msgpackr-extract": "^3.0.2"
@@ -323,9 +323,9 @@
       }
     },
     "node_modules/uuid": {
-      "version": "13.0.0",
-      "resolved": "https://registry.npmjs.org/uuid/-/uuid-13.0.0.tgz",
-      "integrity": "sha512-XQegIaBTVUjSHliKqcnFqYypAd4S+WCYt5NIeRs6w/UAry7z8Y9j5ZwRRL4kzq9U3sD6v+85er9FvkEaBpji2w==",
+      "version": "13.0.2",
+      "resolved": "https://registry.npmjs.org/uuid/-/uuid-13.0.2.tgz",
+      "integrity": "sha512-vzi9uRZ926x4XV73S/4qQaTwPXM2JBj6/6lI/byHH1jOpCzb0zDbfytgA9LcN/hzb2l7WQSQnxITOVx5un/wGw==",
       "funding": [
         "https://github.com/sponsors/broofa",
         "https://github.com/sponsors/ctavan"
@@ -351,9 +351,9 @@
       }
     },
     "node_modules/yaml": {
-      "version": "2.8.3",
-      "resolved": "https://registry.npmjs.org/yaml/-/yaml-2.8.3.tgz",
-      "integrity": "sha512-AvbaCLOO2Otw/lW5bmh9d/WEdcDFdQp2Z2ZUH3pX9U2ihyUY0nvLv7J6TrWowklRGPYbB/IuIMfYgxaCPg5Bpg==",
+      "version": "2.8.4",
+      "resolved": "https://registry.npmjs.org/yaml/-/yaml-2.8.4.tgz",
+      "integrity": "sha512-ml/JPOj9fOQK8RNnWojA67GbZ0ApXAUlN2UQclwv2eVgTgn7O9gg9o7paZWKMp4g0H3nTLtS9LVzhkpOFIKzog==",
       "license": "ISC",
       "bin": {
         "yaml": "bin.mjs"