Unable to run from command line

[martavillegas]

Hi, I cannot run the command line as suggested in http://termsuite.github.io/getting-started/#run-terminology-extraction in Ubuntu 18.04.1 LTS

java --version
openjdk 10.0.2 2018-07-17
OpenJDK Runtime Environment (build 10.0.2+13-Ubuntu-1ubuntu0.18.04.4)
OpenJDK 64-Bit Server VM (build 10.0.2+13-Ubuntu-1ubuntu0.18.04.4, mixed mode)

this is what I go:
$ java -cp termsuite-core-3.0.10.jar fr.univnantes.termsuite.tools.TerminologyExtractorCLI -t ./treetagger/ -c ./wind-energy/English/txt/ -l en --tsv ./wind-energy-en.tsv
WARNING: An illegal reflective access operation has occurred
WARNING: Illegal reflective access by com.google.inject.internal.cglib.core.$ReflectUtils$1 (file:/home/mvillega/Desktop/TERMSUITE_WORKSPACE/termsuite-core-3.0.10.jar) to method java.lang.ClassLoader.defineClass(java.lang.String,byte[],int,int,java.security.ProtectionDomain)
WARNING: Please consider reporting this to the maintainers of com.google.inject.internal.cglib.core.$ReflectUtils$1
WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations
WARNING: All illegal access operations will be denied in a future release
Exception in thread "main" java.lang.NoClassDefFoundError: javax/xml/bind/JAXBException
at java.base/java.lang.Class.getDeclaredFields0(Native Method)
at java.base/java.lang.Class.privateGetDeclaredFields(Class.java:3014)
at java.base/java.lang.Class.getDeclaredFields(Class.java:2207)
at org.apache.uima.fit.internal.ReflectionUtil.getFields(ReflectionUtil.java:60)
at org.apache.uima.fit.factory.ConfigurationParameterFactory.createConfigurationData(ConfigurationParameterFactory.java:411)
at org.apache.uima.fit.factory.ExternalResourceFactory.createExternalResourceDescription(ExternalResourceFactory.java:289)
at org.apache.uima.fit.factory.ExternalResourceFactory.createExternalResourceDescription(ExternalResourceFactory.java:232)
at fr.univnantes.termsuite.uima.CustomResourceTermSuiteAEFactory.createWordTokenizerAEDesc(CustomResourceTermSuiteAEFactory.java:102)
at fr.univnantes.termsuite.framework.PreprocessingPipelineBuilder.create(PreprocessingPipelineBuilder.java:128)
at fr.univnantes.termsuite.api.Preprocessor.asService(Preprocessor.java:330)
at fr.univnantes.termsuite.api.Preprocessor.asService(Preprocessor.java:284)
at fr.univnantes.termsuite.api.Preprocessor.toIndexedCorpus(Preprocessor.java:124)
at fr.univnantes.termsuite.tools.TerminologyExtractorCLI.getIndexedCorpus(TerminologyExtractorCLI.java:192)
at fr.univnantes.termsuite.tools.TerminologyExtractorCLI.run(TerminologyExtractorCLI.java:136)
at fr.univnantes.termsuite.tools.CommandLineClient.launch(CommandLineClient.java:287)
at fr.univnantes.termsuite.tools.TerminologyExtractorCLI.main(TerminologyExtractorCLI.java:203)
Caused by: java.lang.ClassNotFoundException: javax.xml.bind.JAXBException
at java.base/jdk.internal.loader.BuiltinClassLoader.loadClass(BuiltinClassLoader.java:583)
at java.base/jdk.internal.loader.ClassLoaders$AppClassLoader.loadClass(ClassLoaders.java:190)
at java.base/java.lang.ClassLoader.loadClass(ClassLoader.java:499)

Thanks!

[mhabsaoui]

Hi,
The error you get java.lang.NoClassDefFoundError: javax/xml/bind/JAXBException is related to the absence of JAXB module removed by Oracle from JDK starting at version 9 ...

So try adding the following java option : --add-modules java.xml.bind

I succeeded by switching back to Java 8 (use SDKMAN on linux for that) and use the latest termsuite-core-3.0.10.jar

Cheers.