Skip to content

[dextract] Error 1 #76

Description

@taotaoyuan

$make -f dextract_makefile
gcc -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -I/data1/spider/ytbiosoft/soft/hdf5-1.8.15-patch1/hdf5/include -L/data1/spider/ytbiosoft/soft/hdf5-1.8.15-patch1/hdf5/lib -o dextract dextract.c DB.c QV.c -lhdf5
/tmp/ccxK8viC.o: In function main': dextract.c:(.text+0x144): undefined reference to parse_filter'
dextract.c:(.text+0x25e): undefined reference to initBaxData' dextract.c:(.text+0x31f): undefined reference to getBaxData'
dextract.c:(.text+0x345): undefined reference to nextSubread' dextract.c:(.text+0x35b): undefined reference to nextSubread'
dextract.c:(.text+0x37c): undefined reference to evaluate_bax_filter' dextract.c:(.text+0x81f): undefined reference to sam_close'
dextract.c:(.text+0x8f2): undefined reference to sam_open' dextract.c:(.text+0x908): undefined reference to sam_header_process'
dextract.c:(.text+0x937): undefined reference to sam_record_extract' dextract.c:(.text+0x94a): undefined reference to SAM_EOF'
dextract.c:(.text+0x95d): undefined reference to evaluate_bam_filter' dextract.c:(.text+0xee7): undefined reference to sam_open'
dextract.c:(.text+0x12ab): undefined reference to parse_filter' dextract.c:(.text+0x12ef): undefined reference to printBaxError'
collect2: ld returned 1 exit status
make: *** [dextract] Error 1

Metadata

Metadata

Assignees

No one assigned

    Labels

    No labels
    No labels

    Projects

    No projects

    Milestone

    No milestone

    Relationships

    None yet

    Development

    No branches or pull requests

    Issue actions