hi, I have run a 1G , diploid genome with 70~80% repetitive sequences genome . The coverage of my PacBio data is approximately 40 x. As a result the final assembly N50 is 77k . I would be interested how to adjust the parameters to improve the assembly result. Could you please give me some advises? Thank you very much!
hi, I have run a 1G , diploid genome with 70~80% repetitive sequences genome . The coverage of my PacBio data is approximately 40 x. As a result the final assembly N50 is 77k . I would be interested how to adjust the parameters to improve the assembly result. Could you please give me some advises? Thank you very much!