Skip to content

Feature/output names#15

Merged
kfang4 merged 21 commits into
mainfrom
feature/output-names
Jul 22, 2025
Merged

Feature/output names#15
kfang4 merged 21 commits into
mainfrom
feature/output-names

Conversation

@kfang4
Copy link
Copy Markdown
Collaborator

@kfang4 kfang4 commented Jul 21, 2025

Main changes:

  • Rename some output files
    - Use Pearson's residuals for annotating HVGs in both GeoMx and Visium pipelines Revert back to using Seurat
  • Remove cross-team cohort analysis

@kfang4 kfang4 requested a review from hkeward July 21, 2025 21:26
Copy link
Copy Markdown

@hkeward hkeward left a comment

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

LGTM!

@kfang4 kfang4 merged commit dfcdb29 into main Jul 22, 2025
1 check passed
@kfang4 kfang4 deleted the feature/output-names branch July 22, 2025 20:29
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment

Labels

None yet

Projects

None yet

Development

Successfully merging this pull request may close these issues.

2 participants