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All Wales Medical Genomics Service

14 followers
United Kingdom

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DragenWGS DragenWGS Public

A pipeline for analysing WGS data on the Dragen

Shell 6 2
DragenGE DragenGE Public

Pipeline for joint calling of samples from targeted enrichment assays.

Shell 1

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Showing 10 of 58 repositories

DragenWGS Public
A pipeline for analysing WGS data on the Dragen

AWGL/DragenWGS's past year of commit activity

Shell 6 2 0 1 Updated Jul 10, 2026
TSO500_post_processing Public

AWGL/TSO500_post_processing's past year of commit activity

Python 0 0 3 2 Updated Jun 1, 2026
DragenGE Public
Pipeline for joint calling of samples from targeted enrichment assays.

AWGL/DragenGE's past year of commit activity

Shell 1 0 0 1 Updated May 7, 2026
IlluminaQC-WREN Public Forked from mbyvcm/IlluminaQC-WREN

AWGL/IlluminaQC-WREN's past year of commit activity

Shell 0 1 2 0 Updated Apr 21, 2026
CoverageCalculatorPy Public
Calculated coverage metrics from a GATK3 Depth Of Coverage file and a bedfile

AWGL/CoverageCalculatorPy's past year of commit activity

Python 1 0 1 1 Updated Dec 31, 2025
cancer_uom Public
Uncertainty of measurement calculations for cancer NGS

AWGL/cancer_uom's past year of commit activity

Python 0 0 1 1 Updated Nov 4, 2025
SomaticAmplicon Public Forked from mcgml/SomaticAmplicon
NGS pipeline for somatic variant calling from amplicon datasets

AWGL/SomaticAmplicon's past year of commit activity

Shell 0 2 0 0 Updated Oct 14, 2025
DragenQC Public
Pipeline to Demultiplex and initiate downstream pipelines on the Dragen server

AWGL/DragenQC's past year of commit activity

Shell 0 0 1 0 Updated Oct 14, 2025
read_count_data_visualisation Public
A script for visualising read count data for TSO500 runs.

AWGL/read_count_data_visualisation's past year of commit activity

Python 0 0 0 0 Updated Aug 21, 2025
pdf_scanner Public
searches all PDF files in a directory for a given string

AWGL/pdf_scanner's past year of commit activity

Python 0 0 0 0 Updated Jun 26, 2025

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