Sync morfeo and micado psf file settings

MOSAIC/code/apertures_VIS-LR-7.dat

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+# name: MOSAIC VIS B/R system transmission (simple version)
+# description : A 7-fibre bundle for the VIS-LR mode
+# author: Kieran Leschinski
+# sources: E-MOS-SYS-ANR-0063-V20_VIS_OptDesign_preSAR.pdf, adapted
+# date_created: 2025-07-18
+# date_modified: 2025-07-18
+# status : estimate
+# x_cen : 0
+# y_cen : 0
+# x_cen_unit : arcsec
+# y_cen_unit : arcsec
+# x_unit : arcsec
+# y_unit : arcsec
+# r_unit : arcsec
+# angle_unit : deg
+#
+# comments :
+#   - This file contains the positions of a single VIS-LR 7-fibre bundles.
+#   - The hexagon-height (flat-to-flat) is 0.234
+#   - The fibre numbering is from top-left down to bottom-right
+# changes:
+# - 2025-07-18 (KL) initialised
+#
+id      x       y       r       angle   conserve_image  shape
+0       -0.117  -0.203  0.234   90      False   hex     
+1       0.117   -0.203  0.234   90      False   hex     
+2       -0.234  0.000   0.234   90      False   hex     
+3       0.000   0.000   0.234   90      False   hex     
+4       0.234   0.000   0.234   90      False   hex     
+5       -0.117  0.203   0.234   90      False   hex     
+6       0.117   0.203   0.234   90      False   hex     

MOSAIC/docs/mosaic_irdb_summary.rst

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+MOSAIC Instrument Package Summary
+=================================
+
+This document summarises the current state of the MOSAIC instrument package
+in the IRDB, for use in progress reporting.
+
+
+Observation Modes
+-----------------
+
+The MOSAIC package defines **12 observation modes** across three instrument
+categories. All modes currently have development status. The default mode is
+``MOS-LR-R``.
+
+Visual (VIS) Spectroscopy
++++++++++++++++++++++++++
+
+======== ============= ==================
+Mode     Resolution    Dispersion (um/px)
+======== ============= ==================
+MOS-LR-B R = 32 000    1.9e-5
+MOS-LR-R R = 32 000    3.0e-5
+MOS-HR-B1 R = 72 000   6.5e-6
+MOS-HR-B2 R = 72 000   5.0e-6
+MOS-HR-R1 R = 72 000   8.0e-6
+MOS-HR-R2 R = 72 000   1.0e-5
+======== ============= ==================
+
+NIR Multi-Object Spectroscopy (MOS)
+++++++++++++++++++++++++++++++++++++
+
+======== ============= ==================
+Mode     Resolution    Dispersion (um/px)
+======== ============= ==================
+MOS-LR-J R = 16 000    9.5e-5
+MOS-LR-H R = 16 000    9.0e-5
+MOS-HR-H R = 72 000    2.4e-5
+======== ============= ==================
+
+NIR Integral Field Unit (mIFU)
+++++++++++++++++++++++++++++++
+
+======== ============= ==================
+Mode     Resolution    Dispersion (um/px)
+======== ============= ==================
+mIFU-LR-J R = 16 000   9.5e-5
+mIFU-LR-H R = 16 000   9.0e-5
+mIFU-HR-H R = 72 000   2.4e-5
+======== ============= ==================
+
+
+ScopeSim Effect Classes
+-----------------------
+
+The MOSAIC package uses **17 unique ScopeSim Effect classes** across its YAML
+configuration files.
+
+========================== =======================================
+Effect Class               Used In
+========================== =======================================
+ADConversion               MOSAIC_DET_NIR, MOSAIC_DET_VIS
+AutoExposure               MOSAIC_DET_NIR
+BasicReadoutNoise          MOSAIC_DET_NIR, MOSAIC_DET_VIS
+DarkCurrent                MOSAIC_DET_NIR, MOSAIC_DET_VIS
+DetectorList               MOSAIC_DET_NIR, MOSAIC_DET_VIS
+ExposureIntegration        MOSAIC_DET_NIR, MOSAIC_DET_VIS
+ExposureOutput             MOSAIC_DET_NIR
+LinearityCurve             MOSAIC_DET_NIR
+LineSpreadFunction         MOSAIC_NIR, MOSAIC_VIS
+MetisLMSImageSlicer        MOSAIC_NIR, MOSAIC_VIS
+MosaicCollapseSpectralTraces MOSAIC_DET_NIR, MOSAIC_DET_VIS
+MosaicSpectralTraceList    MOSAIC_NIR, MOSAIC_VIS
+QuantumEfficiencyCurve     MOSAIC_DET_NIR, MOSAIC_DET_VIS
+ReferencePixelBorder       MOSAIC_DET_NIR
+SeeingPSF                  MOSAIC_NIR, MOSAIC_VIS
+ShotNoise                  MOSAIC_DET_NIR, MOSAIC_DET_VIS
+TERCurve                   MOSAIC_NIR, MOSAIC_VIS
+========================== =======================================
+
+Of these, ``MosaicCollapseSpectralTraces`` and ``MosaicSpectralTraceList`` are
+MOSAIC-specific custom effects. ``MetisLMSImageSlicer`` is reused from the
+METIS instrument package.
+
+
+YAML Configuration Files
+-------------------------
+
+============================== ==========================================
+File                           Purpose
+============================== ==========================================
+``default.yaml``               Top-level config and mode definitions
+``MOSAIC_NIR.yaml``            NIR instrument optical effects
+``MOSAIC_VIS.yaml``            VIS instrument optical effects
+``MOSAIC_DET_NIR.yaml``        NIR detector (H4RG) effects
+``MOSAIC_DET_VIS.yaml``        VIS detector effects
+============================== ==========================================

MOSAIC/docs/sso/ProgReps/ProgRep_cycle_1_Feb26.md

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+## [[sso-etc:Cycle_1|ETC - Cycle 1]]
+
+###  Status of the software ETC
+
+While there are no deliveries expected for ESO, we are offering the ScopeSim observation simulator to the MOSAIC science team for running feasibility studies for their science cases.
+
+Slide deck with current status (Dec 2025): https://docs.google.com/presentation/d/1ETeuM7kiLp1xcO7O2RYnMYhZ6aWak1xdJuDS0vtABWE/edit?usp=sharing
+
+The first draft of the ETC specifications document for ESO can be found here: https://docs.google.com/document/d/1cWhtF89n1mRFJ9IDOIE9Syhfm56tR6-5YGoQeVHBBD0/edit?usp=sharing
+
+#### Functionalities implemented
+
+We have added a MOSAIC v0.1 package to the ScopeSim "Instrument Reference Database" (IRDB) for use by the science team:
+* ReadTheDocs: https://irdb.readthedocs.io/en/latest/MOSAIC/docs/readme.html
+* Demo Notebook: https://github.com/AstarVienna/irdb/blob/dev_master/MOSAIC/docs/example_notebooks/MOSAIC_demo.ipynb
+
+Modes currently available in the package:
+* VIS - MOS-LR-B+R
+* VIS - MOS-HR-B1+B2+R1+R2
+* NIR - MOS-LR-J+H
+* NIR - MOS-HR-H
+
+The MOSAIC package in ScopeSim makes use of the following optical effect descriptions:
+  1. ADConversion
+  2. AutoExposure
+  3. BasicReadoutNoise
+  4. DarkCurrent
+  5. DetectorList
+  6. ExposureIntegration
+  7. ExposureOutput
+  8. LinearityCurve
+  9. LineSpreadFunction
+  10. MetisLMSImageSlicer (repurposed for MOSAIC)
+  11. MosaicCollapseSpectralTraces
+  12. MosaicSpectralTraceList
+  13. QuantumEfficiencyCurve
+  14. ReferencePixelBorder
+  15. SeeingPSF
+  16. ShotNoise
+  17. TERCurve
+
+#### Limitations
+
+The mIFU modes will be refined and released with the next update:
+* NIR - mIFU-LR-J+H
+* NIR - mIFU-HR-H
+
+While the technical implementation is not very taxing, how the mIFU traces data 
+will be made available to the "science user" in the context of an "ETC-like" tool
+is still under discussion.
+
+###  Version of the software
+* ScopeSim for MOSAIC v0.1
+* ScopeSim: https://github.com/AstarVienna/ScopeSim
+* MOSAIC instrument package: https://github.com/AstarVienna/Irdb/tree/dev_master/MOSAIC
+
+### Development incrementation
+
+#### New features
+* Added MOSAIC v0.1 package to the IRDB for use by the science team
+* 4 VIS and 2 NIR MOS spectroscopy modes available
+* 17 ScopeSim optical effect classes integrated
+
+#### Bug corrections
+* No bug corrections to report for this cycle
+
+### functionalities to be implemented in the next cycle
+* Refine and release mIFU modes (NIR - mIFU-LR-J+H, NIR - mIFU-HR-H)
+* Add a tool to estimate SN-ratios for specfic lines. Currently this is left as
+  exercise to the user, however it should be available in a standardised manner.
+