Repo for automated tracking of Variant of Concern lists from various agencies.
The collapse files can then be used with pango-collapse to extract VOC/VOI/VOMs from SARS-CoV-2 lineage datasets.
pango-collapse \
--url https://raw.githubusercontent.com/AusTrakka/VOC-watch/master/collapse_files/ukhsa.txt \
-o ukhsa.tsv \
-l Nextclade_pango \
nextclade.tsv