deps(actions)(deps): bump github/codeql-action from 4.35.3 to 4.35.5 in the actions-all group across 1 directory#6
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Autonomous resolution of the 3 v0.2 open questions via parallel
3-round craft (5 fungal-named critics: chytrid / rhizomorph /
mycoparasite / saprotroph / mycorrhiza) per the owner's "请继续"
directive (no asking, drive forward, plan-then-one-go).
## Three resolutions
### C4.4 — Invariants under P1-P9 → 9 invariants
The 5-invariant v0.2 baseline is insufficient under expanded P6-P9.
Each new principle (causality, mortality, reproduction, skin)
requires its own mechanical enforcement surface; folding into the
5-baseline dilutes coverage or kills mechanizability.
Final set (full surjective coverage + necessity check passes):
- I1 Pair-Constituted Identity & State Space (P1.c, P1.a, P7-state)
- I2 Two-Tier Governance Classification (P1.b', P1.b'')
- I3 Self-Validation Against Designated SSoT (P3, P4, P9)
- I4 Full-Fidelity Causal DAG (P6, P4, P3)
- I5 Universal Reachability Over Full State Space (P5, P7)
- I6 Universal Inclusion With Observed Metabolism (P2, P2.a, P1)
- I7 Mortality Monotonicity (P7)
- I8 Reproduction Closure (P8, P5)
- I9 Single-Skin Integrity (P9, P2, P1.c)
Sharpening of v0.8-traceable invariants resolves attacks from:
mycoparasite (SSoT redesignation, DAG lossy compression, adjacent-
technique smuggling, agent-discriminating fields), saprotroph
(tier-exemption decay, DAG unbounded growth, reproduction drift),
mycorrhiza (dormancy != death, single-operator semantics, child-
substrate symbiosis-ready).
### C5.3 — Dispatch form → Tropism + Sporocarp punctuation
Verb-form abandoned per owner C5.3. Chosen form is a continuous
chemotropic field (the tropism medium, where P1.c symbiosis and §6
continuity live) punctuated by substrate-initiated sporocarp
fruiting events (the discrete observables, where P3 evolution / P6
causality / I2 governance / I3 validation live).
Beats verb dispatch, continuous metabolic stream, NL semantic
dispatch, capability composition, algebraic operations, reactive
stream, and hybrid on ceiling × flex × efficiency under P1-P9
constraints.
Key structural points:
- Appetite axes are first-class evolvable substrate objects (P3 native).
- Appetite-locality rule: every axis is substrate-internal metabolism;
outbound RPC is I6 breach (prevents capture by LangChain etc.).
- Sporocarps are substrate-initiated (arrow reversed from verbs):
not "agent calls verb → substrate executes", but "gradient crosses
threshold → substrate fruits → agent observes".
- Two-layer duality (field/sporocarp) is medium-vs-observable, NOT
hybrid-of-two-dispatch-forms.
Honest trade-offs: ~3-5× initial implementation cost vs verbs; agent-
side prior cost (learning field/appetite/sporocarp); kind-level
field evolution friction. Recommended fallback if cost dominates:
bare continuous metabolic stream.
### C8.2 — Intent first-class? → (b') trajectory derivation
Intent is NOT a stored substrate data type. It is emergent from the
causal DAG and materialized as a derived "trajectory" view query.
Schema gains zero new types from this resolution. Cost is borne
entirely at the query layer (trajectory derivation is O(graph
traversal); pure (a) first-class type would be O(1) lookup but
creates an unverifiable self-report attack surface — agent claims
intent=X while pursuing Y; mycoparasite-resistant only as (b').
Cross-resolution coherence: sporocarps from C5.3 are the DAG nodes;
trajectory from C8.2 is a subgraph query over them; invariant I4
from C4.4 is the substrate they live in. The three resolutions
reinforce each other.
## Six drift fixes (audit of v0.2 vs archaeology)
D1: §6 "subsystems do them on their own schedule" superseded by
explicit "co-driven" framing — Fix-H25 lazy-medium principle is
superseded by §6 continuous-agent reframing.
D2: §2.2 mis-attribution "P1-P5 cover intake, evolution, iteration,
connection" fixed to "audience, intake, evolution, iteration,
connection".
D3: §7 base signal #6 hardcoded >100 / <1 thresholds replaced with
emergent-threshold framing (seed value from Fix-H11 baseline,
refined by substrate observatory per C6.4).
D4: References to non-existent "P_continuity" replaced with "§6
continuity model" throughout (P4, P6, §3).
D5: Glossary disambiguates rhizomorph (fungal-biology term in §5.1
candidate subsystems vs craft-critic name in derivation logs).
D6: §3 "Not a session-bounded system" sharpened; "Not a request/
response protocol" added.
## L1 OUTLINE v0.1 sketched
docs/architecture/L1_OUTLINE.md (~16KB / 384 lines): structural
shape for L1 carrying the 38 design hooks surfaced by L0 v0.3 (10
from C5.3 tropism + 5 from C4.4 schema-side + 5 from C8.2
trajectory + drift items). Outline only — carries NO authority.
Cannot bind L1 design. Confirms L0 v0.3 is "L1-shaped" (L1 has
clear scope to commit; nothing forced upward into L0).
Sections: §A Continuity / §B Tropism (10 hooks) / §C Schema-SSoT /
§D Governance / §E Skin / §F Lifecycle / §G Hard rules (the v0.9
replacement for v0.8 R1-R7) / §H Trajectory / §I question catalog /
§J document partitioning.
## Cross-resolution consistency check
Sporocarps (C5.3) = DAG nodes (I4 from C4.4) = trajectory atoms
(C8.2). Appetite axes (C5.3 B1) = substrate-internal metabolism
required by I6 from C4.4 = governance-classified per I2 from C4.4.
Trajectory (C8.2) = subgraph query operating over the DAG that I4
enforces full-fidelity. All three crafts referenced each other's
constraints during their derivations; the integrated L0 v0.3 is
internally coherent.
## Pending owner action
Owner reviews L0 v0.3 + L1 outline. On approval: L0 sealed, L1
formal drafting begins per §J partitioning. On request: v0.4 with
any owner-flagged corrections.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
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Owner clarified naming confusion + authorized full structural rework
("完全重做做结构性返工，追求卓越、做到最好最棒"). This commit:
## Naming hygiene
The "v0.X" suffix on L0 drafts was conflating with the proto-Myco
v0.X (dead embryo) versioning. Cleaned up:
- Myco substrate version: **v0.9** (the new Myco being designed).
- L0_VISION.md draft counter: **DRAFT N** (no `v` prefix; integers
only). DRAFT 1-4 were the prior 4 commits (f086b9e, e4ffd61,
210d4dd, 588dca5) under the confusing "L0 v0.1-v0.4" naming.
- Sealed L0 will carry NO version — only git commit identity.
## Structural rework — L0 split, L1 spawn
Root cause of DRAFT 4's bloat (1117 lines): L0 over-committed
specification (§5.2 tropism mechanism, §5.2.1 birth phase, §5.3
trajectory edge cases, §7 signal#7 tropism-specific, §5.1 candidate
subsystem enumeration). L0 should commit identity + constraints;
L1 owns positive mechanism.
DRAFT 5 extracts L1-mechanism content into dedicated L1 documents:
### New files
- **`L1_TROPISM.md`** (DRAFT 1, 17 KB):
Receives DRAFT 4's §5.2 tropism specification, §5.2.1 birth-phase
details, §5.2 7-rival comparison, §5.2 L4 sketch, §5.2 10 L1 hooks
(B1-B10), §A continuity-recovery protocol. Adds explicit
L0-constraint-satisfaction check table.
- **`L1_TRAJECTORY.md`** (DRAFT 1, 10 KB):
Receives DRAFT 4's §5.3 trajectory specification, §5.3.1 clusterer
coupling, §5.3.2 schema-evolution epochs, §5.3.3 thread_id
orthogonal grouping, §5.3.4 cold-start codification, §H L1 hooks.
Adds candidate clustering algorithms + L2/L3 deferred items.
### Modified files
- **`L0_VISION.md`**: 1117 → 656 lines (-461). Restructured:
- §1: tighter; mechanism choices explicitly flagged as L1 territory
- §2: P1-P9 unchanged
- §3: "Not request/response" added (negative space)
- §4: 8 invariants unchanged (the merge was DRAFT-4 work)
- §5: split into §5.1 lexicon (kept) + §5.2 dispatch constraints
only (negative + must-have) + §5.3 intent negative commitment
only. All positive mechanism moved to L1_TROPISM / L1_TRAJECTORY.
- §6: refined to explicitly distinguish substrate-no-session
(L0 commitment) from host-session-reality (out of L0 scope).
Resolves A2 + A3 from prior self-audit.
- §7: 6 base + 1 composite (signal #7 prediction-accuracy moved
to L1 as tropism-specific). Signal #6 attestation cross-check
added (resolves B1 self-audit). Signal #3 generalized from
"appetite-activity diversity" (tropism-specific) to
"read-pattern diversity" (form-agnostic).
- §8: trimmed; host-intermittency caveats explicit.
- §9: amended L0 change protocol — L1 prototyping may surface L0
revision needs (resolves D1 self-audit).
- §10: glossary trimmed; v0.9-vs-DRAFT-N naming explicit.
- **`L1_OUTLINE.md`**: 384 → 199 lines (-185). Restructured into a
charter listing the 7-doc L1 set with current status, the L0→L1
coverage table, the dependency-ordered drafting plan for the
remaining 5 docs (L1_SCHEMA, L1_GOVERNANCE, L1_SKIN, L1_CONTINUITY,
L1_HARD_RULES).
## 13 self-audit problems addressed (from prior turn)
| # | Problem | Resolution |
|---|---|---|
| A1 | L1 content stuffed in L0 | Entire rework (L0 now 656 lines, mechanism content in L1) |
| A2 | Continuous-online vs reality | §6 explicit substrate-level vs host-level session distinction |
| A3 | No-session vs host-session | §6 + §3 + §8 explicit boundaries |
| B1 | Signal #6 unattested computation | §7 explicit attest-with-cross-check |
| B2 | Token vs discrim-attr fuzziness | I1 explicit ephemeral-token vs persistent-discrim split |
| B3 | Vector vs no-RPC tension | I6 embedding-model carve-out (local OR managed-attested) |
| C1 | Schema-evolution-failure | P3 rollback clause + DAG event recording |
| C2 | Compute budget unmentioned | §6 dormancy throttle + L1_TROPISM §A2 |
| C3 | Federation discovery hand-waved | P8 enumerates candidate modes (P2P/attested/registry/hybrid) |
| D1 | Paper-not-code risk | §9.2 amended: L1 prototyping may surface L0 revision needs |
| D2 | Verb-abandonment over-reach | Rework itself: L0 only commits "not verbs", L1 picks positive |
| E1 | Lexicon carve-out ad-hoc | §5.1 explicit principle ("terms mycology literature uses to describe real fungal phenomena") |
## What changed vs DRAFT 4
- **Doctrine unchanged**: 9 root principles + 8 invariants stand
(these were validated in prior pressure-tests and survive).
- **Mechanism moved**: tropism + trajectory specifications now live
in L1 docs, not L0.
- **Naming cleaned**: no more "v0.X" doc-version confusion.
- **L0 now reads as identity layer**: 656 lines of commitments,
not specifications.
## File deltas
```
L0_VISION.md : 1117 → 656 lines (-461; 41% reduction)
L1_OUTLINE.md : 384 → 199 lines (-185; rewritten as charter)
L1_TROPISM.md : NEW → 339 lines
L1_TRAJECTORY.md: NEW → 187 lines
```
Net new content: ~526 lines (L1 specifics that were buried in L0).
Net removed: ~646 lines from L0.
Total doctrine size roughly unchanged; clarity dramatically improved.
## Pending owner action
Owner reviews L0 DRAFT 5 + L1_TROPISM DRAFT 1 + L1_TRAJECTORY DRAFT 1
+ L1_OUTLINE charter. On approval:
- L0 seals (no further drafts).
- Remaining 5 L1 docs drafted in dependency order: L1_SCHEMA →
L1_GOVERNANCE → L1_SKIN → L1_CONTINUITY → L1_HARD_RULES.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
Bumps the actions-all group with 1 update in the / directory: [github/codeql-action](https://github.com/github/codeql-action). Updates `github/codeql-action` from 4.35.3 to 4.35.5 - [Release notes](https://github.com/github/codeql-action/releases) - [Changelog](https://github.com/github/codeql-action/blob/main/CHANGELOG.md) - [Commits](github/codeql-action@e46ed2c...9e0d7b8) --- updated-dependencies: - dependency-name: github/codeql-action dependency-version: 4.35.4 dependency-type: direct:production update-type: version-update:semver-patch dependency-group: actions-all ... Signed-off-by: dependabot[bot] <support@github.com>
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…ion)
Owner asked "是我们对'理想'的认知全面且正确吗？" This Phase α answers it
honestly via three artifacts:
1. **docs/audits/phase_alpha_audit_2026-05-15.md** — comprehensive audit
exposing the truth: L0+L1+L2 doctrine is far more complete than I had
represented in memory snapshots, BUT implementation has drifted from
spec in three measurable ways:
a) **C-row label drift**: 7/20 immune-sporocarp tags truly match
L1_HARD_RULES §1 (C5/C6/C7/C9/C14/C17/C18). Five are
mislabeled at currently-occupied C-row numbers:
- C2_handshake_pubkey_mismatch (L1's C2 = output_endpoint_breach)
- C12_cycle_step_failed (L1's C12 = successor_activation_with_fresh_owner_heartbeat)
- C19_substrate_state_orphan_detected (L1's C19 = paused_dormancy_unsafe_host)
- C20_federation_identity_mismatch (L1's C20 = genesis_attestation_chain_broken)
- C21_birth_period_violation (catalog ends at C20)
Honest count: 7/20 = 35% spec coverage, NOT 12/20 = 60%.
b) **F-row fixed-points** (F1-F17 unconditionally CI per L1_HARD_RULES §2):
1 effectively OK (canonical_bytes_serializer), 5 partial, 11 not
enforced. The substrate has no mutation gate for its own
contract-identity-level fixed-points.
c) **L2_OBSERVABILITY observatory (6 signals + composite + drill
baseline + cycle backlog + doctrine burst)**: 0% implemented.
The substrate is BLIND TO ITSELF — has not yet been given eyes.
Real L0 gaps surviving the audit (vs my pre-audit candidates):
- Embodiment (no physical sensor/actuator notion)
- Energy economics (no computational cost as resource)
- Mesh federation between UNRELATED substrates (P5+P8 cover
reproductive lineage only)
- Aging / senescence (mortality is binary)
- Selective forgetting (I4 append-only; no privacy/efficiency forget)
- Self-model beyond I3 self-validation
- Conflict / competition (all peers cooperative by doctrine)
Revised distance-to-ideal estimate: **~63-65%** (down from 70-72%).
Direction: design more complete than I claimed (+3%), implementation
less aligned than I claimed (-4%), observatory at 0% (-5%).
2. **kernel/bridge/src/protocol.rs**: new bridge message constants
QUERY_SUBSTRATE_OBSERVATORY + _RESPONSE.
3. **myco_substrate/src/server.rs**: handle_query_substrate_observatory
implementing L2_OBSERVABILITY §2 signals #1 (persistence budget:
dag_node_count + dag_edge_count + dag_total_content_bytes +
manifest_cycle_counter) and #6 (read-window-relative position:
substrate_total_bytes / operator_attested_context_window_bytes,
ratio as repr-float for cross-language determinism).
Signal #6 emits "inf" ratio when context window is 0 (substrate
has unbounded headroom). Both signals computed O(N) over DAG;
caching is M25+ work if performance demands it.
This is the FIRST observatory primitive. The substrate can now
answer two questions:
- "How big am I?" (signal #1)
- "Do I fit in agent context?" (signal #6)
Signals 2-5 + composite are M25 work. This down payment proves
Phase α isn't paperwork.
4. **3 Phase α e2e tests** in substrate_e2e.rs:
- phase_alpha_observatory_signal_1_basic_persistence_budget
- phase_alpha_observatory_signal_6_computes_ratio_when_window_attested
- phase_alpha_observatory_signal_6_handles_zero_window
Test totals: Rust 384 → 387 (+3); Python/TS unchanged.
The next direction (revised per §6 of the audit):
- M24.0: C-row label reconciliation (rename drifted detectors,
free C2/C12/C19/C20 for L1-specified meanings)
- M24: Cycle backlog detection (L2_OBSERVABILITY §7)
- M25: Full Living Bets observatory (signals 2-5 + composite)
- M26: Drill failure-rate baseline (L2_OBSERVABILITY §6)
- M27: Doctrine-instability burst detection (L2_OBSERVABILITY §8)
- DEFER: cross-pollination, autonomous evolution, vector retrieval
— these wait until substrate can see itself
First give the substrate eyes. Then debate giving it a brain.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
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Per Phase β audit priority rewrite: build drift-detection BEFORE shipping more features. M24 closes 5 of the 6 planned sub-phases; M24.3 (snapshot.cb integrity) + M24.6 (doctrine-instability burst) deferred to M25 with explicit rationale. ## Shipped ### M24.1 — C-row label reconciliation The Phase β audit confirmed 5 immune sporocarp tags occupy L1_HARD_RULES C2/C12/C19/C20/C21 with substrate-private semantics — labeling drift. M24.1 renames to C30-C35 substrate-private namespace, freeing the L1-reserved numbers for their formal catalog meanings (output_endpoint_breach / successor_activation_with_fresh_owner_heartbeat / paused_dormancy_unsafe_host / genesis_attestation_chain_broken). Renames: - C2_handshake_pubkey_mismatch -> C30_handshake_pubkey_mismatch - C12_cycle_step_failed -> C31_cycle_step_failed - C19_substrate_state_orphan_detected -> C32_substrate_state_orphan_detected - C20_federation_identity_mismatch_detected -> C33_federation_peer_identity_mismatch - C21_birth_period_violation_detected -> C34_birth_period_violation_during_quarantine - C22_federation_substrate_private_event_injection (added in Phase β) -> C35_federation_substrate_private_event_injection Tests + docs updated. events.rs now documents the C-row namespace convention (C1-C20 reserved for L1_HARD_RULES; C30+ substrate-private). ### M24.2 — REVEAL keypair envelope substrate_id binding (Phase β deferred fix) Pre-fix: signing input was canonical_bytes(Map(context=myco-reveal-key-binding-v1, reveal_pubkey)). Cross-substrate replay attack: same operator pubkey pinned on substrate A and B; signature for A replayable against B. Fix: signing input bumped to v2, adds substrate_id binding. Mirrors M23.2 self_euthanasia construction. TS-side change: revealKeyBindingSigningInput(revealPubkey, substrateId). New helper SubstrateClient.querySubstrateId() reads substrate_id from genesis_event DAG node. Existing M14 tests updated to use new helper + pass substrateId. ### M24.4 — Cycle backlog detection (L2_OBSERVABILITY §7) Wire kernel/continuity::CycleEngine::record_backlog / is_backlogged into handle_advance. After each cycle, measure wall-clock duration; if >5s (alive-tier budget), increment backlog. On crossing threshold (default 10), emit C36_cycle_backlog immune sporocarp. handle_advance response now includes cycle_duration_ms field (operator visibility). ### M24.5 — Living Bets observatory signals 2/3/4 + composite #7 Phase α shipped signals #1 (persistence budget) + #6 (read-window ratio). M24.5 adds: - signal #2 evolution_rate: evolution_event_count (axis_registered + evolution_succeeded + evolution_failed) + per-cycle rate - signal #3 read_pattern_diversity: distinct axis names appearing in axis_perturbed (proxy) - signal #4 federation_health: 4a (cumulative fork count; placeholder for M25), 4b (reachable Established peer count), federation_received total - signal #7 composite_health_score: weighted aggregate of #1 (node count, log-scale) + #2 (evolution rate, log-scale) + #4b (peer count, log-scale). Weights 0.4/0.3/0.3 placeholder; M25 replaces with emergent weights per L0 §7 line 357. observatory_format_version bumped from 1 to 2. Signals 5 (time trend) + bet_weakening_quorum predicate deferred to M25 (require historical signal series, which is a separate observatory subsystem). ## Deferred to M25 ### M24.3 — snapshot.cb integrity check Phase β identified snapshot.cb has no integrity validation: a local attacker who can write state_dir can poison the snapshot to inject a different pinned_operator_identity at next boot. Proper fix requires either (a) substrate-private signing keypair (M26+ Ed25519 federation auth work needs the same primitive), or (b) DAG-replay-on-load consistency check (defeats the snapshot optimization). M24.3 deferred to M25 alongside Ed25519 keypair work — both can use the new private key. Mitigation in this commit: documented as KNOWN ISSUE. ### M24.6 — Doctrine-instability burst detector L2_OBSERVABILITY §8: track rate of L0/L1 revisions over rolling window; if above threshold, emit doctrine_instability immune signal. Requires an operator-driven doctrine_revision DAG event flow (substrate doesn't directly observe git commits). M25 work. ## Test totals | Layer | Before | After | Delta | |---|---|---|---| | Rust workspace | 389 | 392 | +3 (M24.5 observatory tests) | | Python kernel | 361 | 361 | 0 | | TS anchor_client | 162 | 162 | 0 | | TS operator_bindings | 135 | 135 | 0 (querySubstrateId helper added but exercised through existing M14 tests) | | **TOTAL** | **1047** | **1050** | **+3** | ## M25+ roadmap (revised after M24) - M25.0: M24.3 snapshot.cb integrity check (using new substrate-private keypair primitive) - M25.1: M24.6 doctrine-instability burst detector - M25.2: observatory signal #5 time trends + bet_weakening_quorum predicate + 90-day window quorum logic - M25.3: emergent weight derivation for composite health score (replaces M24.5 placeholder) - M25.4: Ed25519 federation mutual auth (substrate-private signing keypair) - M25.5: TS operator_bindings catch-up — 14 missing message-pairs (federation/quarantine/euthanasia/observatory) - M26: drill_failure_rate baseline + sporocarp causal_in_edges proof tuple (I4 closure) First the substrate sees itself (Phase α: signals #1+#6; M24: signals #2/#3/#4/#7 + backlog). Then it watches itself drift (M25: signal #5 trends + bet_weakening_quorum). Then doctrine evolution is observable (M25.1 doctrine burst). Only after that is the substrate ready to be given autonomy / evolution / cross-pollination features that require trusting its self-observation. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
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Atomic milestone closing the 4 Phase β-deferred critical security gaps and completing the Living Bets observatory per L0 §7 + L2_OBSERVABILITY: - M25.0 snapshot.cb integrity via substrate-private Ed25519 signing keypair; new substrate_signing_key.cb state-dir file; cross-substrate snapshot copies now rejected with C38_snapshot_integrity_violation - M25.1 doctrine-instability burst detector (L2_OBSERVABILITY §8) emits signal_8_doctrine_revision_burst + C37 immune sporocarp on >10 CI events / 100 cycles - M25.2 signal #5 time trends + bet_weakening_quorum predicate (L0 §7 falsifiability mechanism); per-cycle observatory_history (90-cap VecDeque); when >=3 signals trend against the bet AND signal #6 <1 for >=50% of window, substrate auto-emits C40 + positive bet_weakening_quorum_quorum:{cycle} DAG event - M25.3 emergent composite weights replacing 0.4/0.3/0.3 hardcoded with normalized-stddev-derived weights per L0 §7 line 357; cold start falls back to equal weights until history accumulates - M25.4 Ed25519 federation mutual auth via FED_HELLO signatures with pinned signer_pubkey on reconnect; legacy peers (no signature) fall back to TOFU + observability marker; tampered signatures emit C39 - M25.5 TS operator_bindings 10 method-pair catch-up (federation + observatory + mortality + signing helpers) Observatory format_version bumped 2 -> 3. State-dir layout evolves M21.4 commitment: dag.cb stays sole event SSoT, but persistent files are allowed iff DAG-derivable cache (snapshot.cb) OR substrate-private secret (substrate_signing_key.cb). C-row substrate-private namespace extended to C30-C40; resolved C38 collision by renaming bet_weakening_quorum to C40 (C38 reserved for snapshot_integrity_violation). Test totals: 1094 passing / 0 failing (Rust 424 + Python 361 + TS anchor 162 + TS ops 147). +44 over M24 baseline. Critical security state: 5 of 5 Phase β findings now closed; remaining items (state_dir umask, CSPRNG) are defense-in-depth deferred to M26. L0 9 principle progress: P3 55->60, P8 45->50, P9 58->70; arithmetic mean 77 -> 79.1; weakest-link 45 -> 50; machine-confirmable distance to ideal 66-68% -> 72-75%. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
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Recurring meta-doubt from owner ("is our ideal comprehensive and correct?")
triggered third audit phase, mirroring Phase alpha + Phase beta pattern.
Phase gamma round-1 (6 opus agents in parallel, ~180 findings, 23 CRITICAL):
- gamma.1 doctrine drift: 13 sub-clauses untracked in M25 snapshot
- gamma.2 M25 fidelity: 5+ CRITICAL bugs (signal_8 field-name break,
signal_7 weights structure break, M25.2 90-cycle vs 90-day, signal #6
direction inversion, FED_HELLO signature optional bypass)
- gamma.3 12 new structural gaps (G8-G19): adversarial owner, owner
mortality, time semantics, forkbomb, anchor client DR, aged Living Bets
seed, liveness, substrate_id collision, backup privacy, doctrine
self-consistency, catastrophic forgetting, single-skin failure
- gamma.4 stranded libraries: kernel/skin lib correct substrate wrong;
kernel/continuity::DormancyMachine lib correct ad-hoc sufficient;
kernel/governance::classifier NOT stranded (Phase beta was wrong)
- gamma.5 anchor surface: 9 of 11 sec.9 sub-clauses 0-30% mechanically
enforced; operator-IS-anchor collapse; needs 5 milestones not 1
- gamma.6 meta-framework: 6 missing principles, sec.1 species claim
FALSE in 4 ways, Living Bets bet already weak at 1M-context
L0 DRAFT 9 PROPOSAL v2 written (was DRAFT 8 since 2026-05-13):
- 15 principles (was 9): added P10 Selective Compression + P11 Metabolic
Economy + P12 Differential Response + P13 Embodiment + P14 Telos
(agent-symbiotic-flourishing) + P15 Population-Level Consensus
- 12 invariants (was 8): added I9 Compression Discipline + I10
Metabolic-Economy Observation + I11 Differential-Response Discipline
+ I12 Telos Alignment
- 4 new L0 sections: sec.13 Time Semantics, sec.14 Adversarial Owner
Threat Model, sec.15 Owner Mortality + Succession, sec.16 Generation
Limits
- sec.9 anchor surface decomposed into 6 sub-mechanisms + 5 M-anchor
milestones
- sec.7 Living Bets recalibrated: intelligence band, cost-justified
value, bet retirement
- P1 renamed Only For Agent -> Agent-Primary (drops false 人类无感知)
- P2 renamed Eternal Ingestion -> Eternal Ingestion (Envelope-Gated)
- P3 renamed Eternal Evolution -> Resumable Evolution
- P5 renamed Universal Interconnection -> Universal Interconnection
(Tier-Exempt-Permitted)
- P9 renamed Integument -> Single Integument
- sec.1 species claim retracted from literal taxonomic class to
biology-rooted symbiotic digital substrate
Phase gamma round-2 (6 fungal critics on DRAFT 9 v1, ~223 findings, 54
CRITICAL): mycorrhiza 32/6 + saprotroph 49/8 + mycoparasite 39/11 +
rhizomorph 35/13 + hypha 35/8 + primordium 33/8. DRAFT 9 v2 applies 12
structural CRITICAL fixes (sec.7.1 mutual-constitution vs P1.c
asymmetric-carrier contradiction; signal numbering ordinal discipline;
quorum trend OLS definition; birth-period exemptions for sec.7 quorum +
P12.b + P14.c; P10/P11 deadlock resolution via ordered fallback; sec.15
anchor-surface-availability gate; alive sub-states enumeration; sec.7.5
bet-retirement counter-reset and proposal-vs-execution clarity).
Remaining 42 CRITICALs deferred to:
- Owner-decision gates G-1 through G-11 (sec.17): saprotroph retraction
proposal, mycoparasite seal-vs-vulnerability, mycorrhiza
relationship-type-naming
- Cascade work (L1/L2/L3 alignment): 17 files audited, ~140 sections
flagged, 11 HIGH-impact, ~30-40 atomic commits, ~40-55 hours
Honest distance to ideal RETRACTED from M25 claim:
- M25 snapshot: 72-75% machine-confirmable (over-credit)
- Phase gamma honest: ~50-55% mean / ~25% weakest-link (P1 anchor
surface collapsed)
- Framework completeness (DRAFT 8 was 9/15 essential principles): ~60%
Phase gamma deliverables:
- docs/architecture/L0_VISION.md DRAFT 9 v2 (~1100 lines, replaces
DRAFT 8)
- docs/audits/phase_gamma_audit_2026-05-17.md (~793 lines, 16 sections)
- docs/audits/phase_gamma_cascade_list_2026-05-17.md (17 files, ~140
sections flagged)
M26+ roadmap revised: M26 cascade alignment + M-anchor-1 through
M-anchor-5 + M25 bug fixes (gated on owner G-9/G-10 decisions); M27
stranded library wire-in (classifier removed from backlog per gamma.4
correction); M28+ deferred features unchanged.
The meta-pattern continues: Phase alpha (maintainer-model drift) + Phase
beta (implementation drift) + Phase gamma (doctrinal blind spots +
ideal-set incompleteness). Each phase finds a new drift class.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
Battam1111
pushed a commit
that referenced
this pull request
May 19, 2026
… signing-key sealing) Closes Phase γ.2 audit findings deferred from M25. Phase B structural refactor (commit 507649b) cleaned the architecture; M26.1 ships the functional + security fixes. Test totals: 424 → 430 passed (+6 net new tests), 0 failed. C1 — signal_8 field-name break (cross-language) Rust emitted `signal_8_doctrine_revision_burst` but TS parsed `signal_8_doctrine_burst`. TS clients silently received zero doctrine-burst data. FIX: TS canonical name aligned to Rust. Update at operator_bindings/claude_code/src/protocol/messages.ts L1293. C2 — signal_7 weights field-structure break Rust emitted 3 flat sibling keys (weight_signal_N_repr); TS expected nested `weights` Map. FIX: Rust now emits nested Map matching TS parser. Tests updated to look up `signal_7.weights.{signal_1,signal_2,signal_4b}`. C3 — 90-cycle vs 90-day window (off by 4-6 orders of magnitude) observatory.rs used substrate-cycle counter; L0 §7.4.a + §13.1 require wall-clock 90 days. FIX: parameter renamed `burst_window_unix_ns: i64` (default 90 days in nanoseconds). Cycle-cutoff derived from observatory_history's cycle↔unix_ns mapping. INTERIM: substrate-process wall-clock used (M-anchor-3 promotes to anchor-stamped wall-clock per L0 §13.1). Signal #8 payload field renamed ci_events_recent_100_cycles → ci_events_in_burst_window. C4 — signal #6 direction comment misrepresented spec Behavior was correct (sig_6_dir=="down" counts against bet) but comment claimed opposite, creating risk of incorrect "fix". FIX: comment rewritten to match L2_OBSERVABILITY §2.1 + algorithms/bet_weakening_quorum.md. Behavior unchanged. C5 — FED_HELLO signature OPTIONAL = TOFU bypass attack Attacker could omit signature → fallback to legacy TOFU pinning, defeating M25.4 mutual auth entirely. FIX: legacy peers REJECTED by default with C39 sub-grade `missing_required_signature`. New field FederationState.accept_legacy_peers (default false). Env var MYCO_ACCEPT_LEGACY_PEERS=1 enables transition-period override. Long-term TODO: CI-attested override per L1_GOVERNANCE. Pre-existing M25.4 legacy-compat test inverted to assert default-deny + C39 evidence; new ..._accepted_with_env_override test retains coverage of override path. C6 — substrate_signing_key.cb unsealed (L1_HARD_RULES C4 violation) Seed file written with default OS permissions; readable by any user process. Full OS sealing (TPM/Secure Enclave/keyring/DPAPI) deferred to M-anchor-1; interim defense via restrictive file mode. FIX: - Unix (#[cfg(unix)]): chmod 0600 after atomic rename (restrict_secret_file_permissions helper) - Windows: gated no-op + permission check reports "restrictive" (ACL hardening deferred to M-anchor-1) - Load-time verification: substrate_secret_permissions_are _restrictive() checks mode & 0o077; loose mode triggers C4_substrate_secret_unsealed immune sporocarp + in-place tightening via tighten_substrate_signing_key_permissions() - boot_or_genesis_substrate_signing_key_with_permission_status() returns (seed, was_restrictive) for post-ServerState C4 emission Test additions (11 new test functions; 1 pre-existing test inverted): C5 unit (4): m26_1_c5_default_rejects_legacy_peers, ..._env_var_1_enables_override, ..._env_var_true_enables_override, ..._env_var_garbage_keeps_default_deny (env-mutex serialized) C5 e2e (2): m26_1_c5_legacy_hello_rejected_by_default, m26_1_c5_legacy_hello_accepted_with_env_override C6 unit (5; 4 Unix-only + 1 portable): m26_1_c6_save_writes_seed_with_0600_mode (Unix), m26_1_c6_loose_mode_reported_by_permission_check (Unix), m26_1_c6_tighten_in_place_restores_0600 (Unix), m26_1_c6_boot_helper_reports_loose_mode (Unix), m26_1_c6_genesis_path_reports_restrictive (portable) C6 e2e (1; Unix-only): m26_1_c6_loose_seed_emits_c4_and_tightens Files modified: - myco_substrate/src/observatory.rs (C2 nested weights + C3 wall-clock + C4 comment) - myco_substrate/src/federation/mod.rs (C5 accept_legacy_peers + reject policy + tests) - myco_substrate/src/persistence.rs (C6 chmod 0600 + permission check + tests) - myco_substrate/src/server.rs (C5 federation env-policy constructor + C6 boot-path probe) - myco_substrate/tests/substrate_e2e.rs (C2 weights test rewrites + C3 ci_events field rename + C5 e2e tests + C6 e2e test + spawn_substrate_with_env helper) - operator_bindings/claude_code/src/protocol/messages.ts (C1 signal_8 canonical name) Verification: - cargo test --workspace --release: 430 passed / 0 failed (Windows; +5 Unix-only tests register on Linux/macOS CI) - npm test (operator_bindings/claude_code): 147 passed / 0 failed - All 6 bugs documented with audit-citation comments Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
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Bumps the actions-all group with 1 update in the / directory: github/codeql-action.
Updates
github/codeql-actionfrom 4.35.3 to 4.35.5Release notes
Sourced from github/codeql-action's releases.
Changelog
Sourced from github/codeql-action's changelog.
... (truncated)
Commits
9e0d7b8Merge pull request #3905 from github/update-v4.35.5-d4b4855156d7d599Add changelog entry for #389951f7e38Update changelog for v4.35.5d4b4855Merge pull request #3899 from github/mbg/esbuild/split127de81Merge remote-tracking branch 'origin/main' into mbg/esbuild/split7fde13fUse src + basename in header to avoid issues on Windowsdfa61e7Improve pattern matching and error handling52aafecImport and callrunWrappernormally inanalyzetests0d08c01Auto-generate shared bundle14085a6Auto-generate entry points