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Update uk1s3.embassy URLs to livingobjects#77

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will-moore wants to merge 1 commit intoBioNGFF:mainfrom
will-moore:livingobjects_urls
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Update uk1s3.embassy URLs to livingobjects#77
will-moore wants to merge 1 commit intoBioNGFF:mainfrom
will-moore:livingobjects_urls

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Description

Give a brief summary of changes...

Updates OME-Zarr urls from uk1s3.embassy to livingobjects as this storage is being migrated. New URLs should be working already.

Type of change

  • 🐛 Bug fix (non-breaking change that resolves an issue)
  • ✨ New feature (non-breaking change that adds functionality)
  • ⚡ Optimisation (non-breaking improvement to performance or efficiency)
  • 🧩 Documentation (adds or improves documentation)
  • 🧱 Maintenance (refactor, dependency update, CI/CD, etc.)
  • 🔥 Breaking change (fix or feature that causes existing functionality to change)

Checklist

  • All tests pass (eg. npm test)
  • Pre-commit hooks run successfully (eg. pre-commit run --all-files)
  • Documentation updated (if required)

Copilot AI review requested due to automatic review settings April 16, 2026 15:21
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netlify Bot commented Apr 16, 2026

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Pull request overview

Updates example/fixture OME-Zarr endpoints from uk1s3.embassy.ebi.ac.uk to livingobjects.ebi.ac.uk to align with the storage migration.

Changes:

  • Updated the IDR example notebook to read the dataset from the new livingobjects base URL.
  • Updated the 6001240_labels fixture metadata to point at the new livingobjects location.

Reviewed changes

Copilot reviewed 2 out of 2 changed files in this pull request and generated no comments.

File Description
python/notebooks/IDR_example.ipynb Switches the remote Zarr URL used in the notebook example to the new livingobjects host.
fixtures/6001240_labels.yaml Updates the fixture source URL to the new livingobjects host.

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2 participants