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BiomedicalMachineLearning / stLearn Public

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Subset of anndata leads to broken graph connectivity #354

Merged

newmana merged 4 commits into

masterBiomedicalMachineLearning/stLearn:masterfrom

newmana/fix_pathsBiomedicalMachineLearning/stLearn:newmana/fix_pathsCopy head branch name to clipboard

Jun 26, 2026

Conversation Commits4 (4)Checks Files changed

Merged

Subset of anndata leads to broken graph connectivity #354
newmana merged 4 commits into
masterfrom
newmana/fix_paths

Commits

Commits on Jun 25, 2026

Add tests for infinity psueodotime/disconnected graphs. Remove knn as part of pseudotime and just check.
newmana
committed
Fix tests due to changing API/data type warning.
newmana
committed
Reformat.
newmana
committed

Commits on Jun 26, 2026

Support using xe-outs (experimental) and finding the required files in subdirectories.
newmana
committed

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