Repository navigation
Easy to follow, easy to install: front cover, install guide, miros install - #3
Merged
Merged
Conversation
…eference pages The README is now what a newcomer, or their coding agent, reads first: what MIROS is, three commands to install it, one more step each for the two SimVascular solvers, the example, and a table of pages. Everything else moved to docs/: install per OS with what miros doctor should print, the window, the commands and stages, the case file with the template miros init writes, segmentation, tuning, troubleshooting, development. A test keeps the template block equal to write_template() and every local link resolving. CITATION.cff and AGENTS.md added; the repository description and topics set. Co-Authored-By: Claude Fable 5.1 <noreply@anthropic.com> Claude-Session: https://claude.ai/code/session_01TVDuxAARJKeMEegQngyQkf
`miros install pysvzerod` takes a prebuilt wheel from this repository's `solvers` release when one fits the interpreter and platform, else builds from svZeroDSolver's git with the compiler requirement spelled out. `miros install onedsolver` downloads the prebuilt executable into ~/.miros/bin, which the solver search now looks in first. `miros install seqseg` installs SeqSeg with a CUDA torch where nvidia-smi is found (or --gpu / --cpu), then the aorta_ct weights. `miros install all` does the three. `miros doctor` ends with the commands that complete the install. build-solvers.yml compiles svOneDSolver and pysvzerod wheels on the Linux, macOS and Windows runners (Python 3.10 to 3.12) and attaches them to the `solvers` release. Co-Authored-By: Claude Fable 5.1 <noreply@anthropic.com> Claude-Session: https://claude.ai/code/session_01TVDuxAARJKeMEegQngyQkf
…the packaging is checked The first solver build put OneDSolver for Linux, macOS and Windows and Linux and macOS pysvzerod wheels on the `solvers` release. The Windows wheels built but could not find a DLL at import, so delvewheel now bundles what the extension needs; the macOS wheels were tagged for the runner's macOS 26 and universal2, so the deployment target is 12.0 and the matcher accepts universal2. The Windows OneDSolver links its C runtime statically. Layer 3 groundwork: package metadata and URLs, a publish workflow with PyPI trusted publishing on v* tags, a CI job that builds the sdist and wheel and installs the wheel in a fresh environment, and README links that render on PyPI. The name `miros` is taken on PyPI (a statechart library), so the distribution needs another name before a release. Co-Authored-By: Claude Fable 5.1 <noreply@anthropic.com> Claude-Session: https://claude.ai/code/session_01TVDuxAARJKeMEegQngyQkf
Co-Authored-By: Claude Fable 5.1 <noreply@anthropic.com> Claude-Session: https://claude.ai/code/session_01TVDuxAARJKeMEegQngyQkf
…s with miros install The bash shell on the Windows runner puts Git's mingw64/bin first on PATH, so CMake compiled pysvzerod with gcc and the extension could not load into CPython. CC and CXX name cl and msvc-dev-cmd puts it on PATH. CI now fetches pysvzerod and OneDSolver with miros install on every OS, so the integration tests solve the 0D and 1D models for real there. Co-Authored-By: Claude Fable 5.1 <noreply@anthropic.com> Claude-Session: https://claude.ai/code/session_01TVDuxAARJKeMEegQngyQkf
Co-Authored-By: Claude Fable 5.1 <noreply@anthropic.com> Claude-Session: https://claude.ai/code/session_01TVDuxAARJKeMEegQngyQkf
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
Add this suggestion to a batch that can be applied as a single commit.This suggestion is invalid because no changes were made to the code.Suggestions cannot be applied while the pull request is closed.Suggestions cannot be applied while viewing a subset of changes.Only one suggestion per line can be applied in a batch.Add this suggestion to a batch that can be applied as a single commit.Applying suggestions on deleted lines is not supported.You must change the existing code in this line in order to create a valid suggestion.Outdated suggestions cannot be applied.This suggestion has been applied or marked resolved.Suggestions cannot be applied from pending reviews.Suggestions cannot be applied on multi-line comments.Suggestions cannot be applied while the pull request is queued to merge.Suggestion cannot be applied right now. Please check back later.
Layer 1: a short README as the front cover,
docs/with an install guide per operating system and the reference pages, CITATION.cff, AGENTS.md. Layers 2 and 3 (miros installfor the solvers and SeqSeg, prebuilt solver artifacts, PyPI readiness) follow on this branch.🤖 Generated with Claude Code
https://claude.ai/code/session_01TVDuxAARJKeMEegQngyQkf