Skip to content

ci: update readme with createreadme github action. #65

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Merged
ccbr-bot merged 1 commit into from
May 17, 2026
Merged

ci: update readme with createreadme github action. #65

Show file tree
Hide file tree
Changes from all commits
Commits
Show all changes
1 commit
Select commit
File filter

Filter by extension

Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
27 changes: 13 additions & 14 deletions profile/README.md
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -15,31 +15,30 @@

| Repo Name | Release Name | Release Date | Open Issues |
|:-----------------------------------------------|:----------------------------------------------------------------|:---------------|--------------:|
| [SINCLAIR](https://github.com/CCBR/SINCLAIR) | [v0.4.0](https://github.com/CCBR/SINCLAIR/releases/tag/v0.4.0) | 2026-05-13 | 30 |
| [MOSuite](https://github.com/CCBR/MOSuite) | [v0.3.1](https://github.com/CCBR/MOSuite/releases/tag/v0.3.1) | 2026-05-07 | 30 |
| [CARLISLE](https://github.com/CCBR/CARLISLE) | [v2.7.6](https://github.com/CCBR/CARLISLE/releases/tag/v2.7.6) | 2026-05-06 | 20 |
| [actions](https://github.com/CCBR/actions) | [v0.6.2](https://github.com/CCBR/actions/releases/tag/v0.6.2) | 2026-04-23 | 12 |
| [SINCLAIR](https://github.com/CCBR/SINCLAIR) | [v0.3.6](https://github.com/CCBR/SINCLAIR/releases/tag/v0.3.6) | 2026-04-22 | 30 |
| [CHAMPAGNE](https://github.com/CCBR/CHAMPAGNE) | [v0.6.0](https://github.com/CCBR/CHAMPAGNE/releases/tag/v0.6.0) | 2026-04-17 | 30 |
| [RENEE](https://github.com/CCBR/RENEE) | [v2.7.5](https://github.com/CCBR/RENEE/releases/tag/v2.7.5) | 2026-04-06 | 22 |
| [Tools](https://github.com/CCBR/Tools) | [v0.5.2](https://github.com/CCBR/Tools/releases/tag/v0.5.2) | 2026-03-24 | 9 |
| [HowTos](https://github.com/CCBR/HowTos) | [v1.1.0](https://github.com/CCBR/HowTos/releases/tag/v1.1.0) | 2026-02-23 | 14 |
| [Tools](https://github.com/CCBR/Tools) | [v0.5.2](https://github.com/CCBR/Tools/releases/tag/v0.5.2) | 2026-03-24 | 8 |
| [HowTos](https://github.com/CCBR/HowTos) | [v1.1.0](https://github.com/CCBR/HowTos/releases/tag/v1.1.0) | 2026-02-23 | 15 |
| [parkit](https://github.com/CCBR/parkit) | [v3.0.1](https://github.com/CCBR/parkit/releases/tag/v3.0.1) | 2026-02-19 | 3 |
| [LOGAN](https://github.com/CCBR/LOGAN) | [v0.3.3](https://github.com/CCBR/LOGAN/releases/tag/v0.3.3) | 2026-02-12 | 21 |

## TOP contributors

| User | Total Commits | Commits in Last Month | Commits in Last 6 Months |
|:----------------------------------------------------|----------------:|------------------------:|---------------------------:|
| [kelly-sovacool](https://github.com/kelly-sovacool) | 5959 | 114 | 798 |
| [kelly-sovacool](https://github.com/kelly-sovacool) | 6096 | 150 | 871 |
| [kopardev](https://github.com/kopardev) | 2791 | 4 | 113 |
| [finneyr](https://github.com/finneyr) | 323 | 0 | 0 |
| [kvaldez](https://github.com/kvaldez) | 222 | 0 | 0 |
| [escauley](https://github.com/escauley) | 192 | 0 | 37 |
| [wong-nw](https://github.com/wong-nw) | 185 | 6 | 49 |
| [samarth8392](https://github.com/samarth8392) | 161 | 0 | 19 |
| [pajailwala](https://github.com/pajailwala) | 47 | 14 | 24 |
| [wong-nw](https://github.com/wong-nw) | 196 | 4 | 49 |
| [escauley](https://github.com/escauley) | 192 | 0 | 32 |
| [samarth8392](https://github.com/samarth8392) | 163 | 2 | 19 |
| [pajailwala](https://github.com/pajailwala) | 47 | 3 | 24 |
| [maggiecam](https://github.com/maggiecam) | 46 | 0 | 0 |
| [phoman14](https://github.com/phoman14) | 19 | 3 | 11 |
| [phoman14](https://github.com/phoman14) | 19 | 2 | 11 |
## About Us

- 👋 Hi, we're the [**@CCBR**](https://bioinformatics.ccr.cancer.gov/ccbr/), a group of bioinformatics analysts and engineers
Expand Down Expand Up @@ -168,22 +167,22 @@ In additions to end-to-end analysis pipelines, the CCBR dev team also builds too
## Latest Releases of pipelines/tools:
| Repo Name | Release Name | Release Date | Open Issues |
|:-----------------------------------------------------------------------------|:-------------------------------------------------------------------------------|:---------------|--------------:|
| [SINCLAIR](https://github.com/CCBR/SINCLAIR) | [v0.4.0](https://github.com/CCBR/SINCLAIR/releases/tag/v0.4.0) | 2026-05-13 | 30 |
| [MOSuite](https://github.com/CCBR/MOSuite) | [v0.3.1](https://github.com/CCBR/MOSuite/releases/tag/v0.3.1) | 2026-05-07 | 30 |
| [CARLISLE](https://github.com/CCBR/CARLISLE) | [v2.7.6](https://github.com/CCBR/CARLISLE/releases/tag/v2.7.6) | 2026-05-06 | 20 |
| [actions](https://github.com/CCBR/actions) | [v0.6.2](https://github.com/CCBR/actions/releases/tag/v0.6.2) | 2026-04-23 | 12 |
| [SINCLAIR](https://github.com/CCBR/SINCLAIR) | [v0.3.6](https://github.com/CCBR/SINCLAIR/releases/tag/v0.3.6) | 2026-04-22 | 30 |
| [CHAMPAGNE](https://github.com/CCBR/CHAMPAGNE) | [v0.6.0](https://github.com/CCBR/CHAMPAGNE/releases/tag/v0.6.0) | 2026-04-17 | 30 |
| [RENEE](https://github.com/CCBR/RENEE) | [v2.7.5](https://github.com/CCBR/RENEE/releases/tag/v2.7.5) | 2026-04-06 | 22 |
| [Tools](https://github.com/CCBR/Tools) | [v0.5.2](https://github.com/CCBR/Tools/releases/tag/v0.5.2) | 2026-03-24 | 9 |
| [HowTos](https://github.com/CCBR/HowTos) | [v1.1.0](https://github.com/CCBR/HowTos/releases/tag/v1.1.0) | 2026-02-23 | 14 |
| [Tools](https://github.com/CCBR/Tools) | [v0.5.2](https://github.com/CCBR/Tools/releases/tag/v0.5.2) | 2026-03-24 | 8 |
| [HowTos](https://github.com/CCBR/HowTos) | [v1.1.0](https://github.com/CCBR/HowTos/releases/tag/v1.1.0) | 2026-02-23 | 15 |
| [parkit](https://github.com/CCBR/parkit) | [v3.0.1](https://github.com/CCBR/parkit/releases/tag/v3.0.1) | 2026-02-19 | 3 |
| [LOGAN](https://github.com/CCBR/LOGAN) | [v0.3.3](https://github.com/CCBR/LOGAN/releases/tag/v0.3.3) | 2026-02-12 | 21 |
| [XAVIER](https://github.com/CCBR/XAVIER) | [v3.2.2](https://github.com/CCBR/XAVIER/releases/tag/v3.2.2) | 2026-01-29 | 11 |
| [ASPEN](https://github.com/CCBR/ASPEN) | [v1.1.2](https://github.com/CCBR/ASPEN/releases/tag/v1.1.2) | 2025-07-17 | 17 |
| [spacesavers2](https://github.com/CCBR/spacesavers2) | [v0.14.1](https://github.com/CCBR/spacesavers2/releases/tag/v0.14.1) | 2025-07-15 | 7 |
| [CCBR_tobias](https://github.com/CCBR/CCBR_tobias) | [v0.3.1](https://github.com/CCBR/CCBR_tobias/releases/tag/v0.3.1) | 2025-06-23 | 3 |
| [TRANQUIL](https://github.com/CCBR/TRANQUIL) | [v0.3.0](https://github.com/CCBR/TRANQUIL/releases/tag/v0.3.0) | 2025-06-16 | 3 |
| [CRISPIN](https://github.com/CCBR/CRISPIN) | [v1.2.1](https://github.com/CCBR/CRISPIN/releases/tag/v1.2.1) | 2025-05-28 | 16 |
| [CRISPIN](https://github.com/CCBR/CRISPIN) | [v1.2.1](https://github.com/CCBR/CRISPIN/releases/tag/v1.2.1) | 2025-05-28 | 19 |
| [CHARLIE](https://github.com/CCBR/CHARLIE) | [v0.12.0](https://github.com/CCBR/CHARLIE/releases/tag/v0.12.0) | 2025-05-20 | 14 |
| [Dockers2](https://github.com/CCBR/Dockers2) | [v0.1.2](https://github.com/CCBR/Dockers2/releases/tag/v0.1.2) | 2024-12-02 | 5 |
| [METRO](https://github.com/CCBR/METRO) | [v2.1](https://github.com/CCBR/METRO/releases/tag/v2.1) | 2024-03-28 | 2 |
Expand Down
16 changes: 8 additions & 8 deletions profile/activity_data/CCBR/README.md
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -2,26 +2,26 @@
| github_handle | member/collaborator | days_inactive |
|-----------------|----------------------|---------------|
| [bfugaru2025](https://github.com/bfugaru2025) | member | No Activity Found |
| [bianjh-cloud](https://github.com/bianjh-cloud) | member | 0 |
| [bianjh-cloud](https://github.com/bianjh-cloud) | member | 7 |
| [burnskd](https://github.com/burnskd) | member | No Activity Found |
| [epehrsson](https://github.com/epehrsson) | member | 6 |
| [epehrsson](https://github.com/epehrsson) | member | 13 |
| [escauley](https://github.com/escauley) | member | 2 |
| [finneyr](https://github.com/finneyr) | member | No Activity Found |
| [HidetakaOhnuki-NCI](https://github.com/HidetakaOhnuki-NCI) | member | No Activity Found |
| [huaitian1129](https://github.com/huaitian1129) | member | No Activity Found |
| [JWrows2014](https://github.com/JWrows2014) | member | No Activity Found |
| [kcgfarb](https://github.com/kcgfarb) | member | No Activity Found |
| [kelly-sovacool](https://github.com/kelly-sovacool) | member | 2 |
| [kopardev](https://github.com/kopardev) | member | 3 |
| [kopardev](https://github.com/kopardev) | member | 4 |
| [kvaldez](https://github.com/kvaldez) | member | No Activity Found |
| [lobanovav](https://github.com/lobanovav) | member | No Activity Found |
| [maggiecam](https://github.com/maggiecam) | member | No Activity Found |
| [onealka](https://github.com/onealka) | member | No Activity Found |
| [pajailwala](https://github.com/pajailwala) | member | 20 |
| [phoman14](https://github.com/phoman14) | member | 20 |
| [pajailwala](https://github.com/pajailwala) | member | 27 |
| [phoman14](https://github.com/phoman14) | member | 27 |
| [raraslw-nih](https://github.com/raraslw-nih) | member | No Activity Found |
| [RobSchultz4](https://github.com/RobSchultz4) | member | No Activity Found |
| [samarth8392](https://github.com/samarth8392) | member | 2 |
| [samarth8392](https://github.com/samarth8392) | member | 9 |
| [shaoli86](https://github.com/shaoli86) | member | No Activity Found |
| [TJoshMeyer](https://github.com/TJoshMeyer) | member | No Activity Found |
| [VidhurDS](https://github.com/VidhurDS) | member | No Activity Found |
Expand All @@ -31,10 +31,10 @@
| [wuy24](https://github.com/wuy24) | member | No Activity Found |
| [yongmzhao](https://github.com/yongmzhao) | member | No Activity Found |
| [abombin](https://github.com/abombin) | collaborator | No Activity Found |
| [AlecSilver](https://github.com/AlecSilver) | collaborator | 20 |
| [AlecSilver](https://github.com/AlecSilver) | collaborator | 2 |
| [dnousome](https://github.com/dnousome) | collaborator | No Activity Found |
| [e-hutchins](https://github.com/e-hutchins) | collaborator | No Activity Found |
| [fangliu117](https://github.com/fangliu117) | collaborator | 20 |
| [fangliu117](https://github.com/fangliu117) | collaborator | 2 |
| [nanobio-jcjones](https://github.com/nanobio-jcjones) | collaborator | No Activity Found |
| [skchronicles](https://github.com/skchronicles) | collaborator | No Activity Found |
| [slsevilla](https://github.com/slsevilla) | collaborator | No Activity Found |
Expand Down
Loading