chore: fix ixa setup script by cdc-as81 · Pull Request #796 · CDCgov/ixa

cdc-as81 · 2026-02-23T21:06:02Z

No description provided.

github-actions · 2026-02-23T21:40:46Z

Benchmark Results

Hyperfine

Command	Mean [ms]	Min [ms]	Max [ms]	Relative
`large_sir::baseline`	2.9 ± 0.1	2.8	3.1	1.00
`large_sir::entities`	12.4 ± 0.2	12.2	13.1	4.28 ± 0.10

Criterion

Regressions (slower)

Group	Bench	Param	Change	CI Lower	CI Upper
sample_entity	`sample_entity_single_property_unindexed`	10000	14.183%	12.093%	16.269%
sample_entity	`sample_entity_single_property_unindexed`	1000	7.944%	6.153%	9.717%
indexing	`with_query_results_multiple_individually_indexed_properties_enti`		4.685%	4.521%	4.834%
sampling	`sampling_single_known_length_entities`		4.226%	3.733%	4.574%
sampling	`sampling_multiple_l_reservoir_entities`		4.075%	3.773%	4.403%
indexing	`query_people_multiple_individually_indexed_properties_entities`		2.504%	2.377%	2.612%
algorithm_benches	`algorithm_sampling_multiple_l_reservoir`		2.223%	1.815%	2.744%
algorithm_benches	`algorithm_sampling_multiple_known_length`		2.125%	1.780%	2.427%
indexing	`query_people_indexed_multi-property_entities`		2.097%	1.770%	2.419%
sample_entity	`sample_entity_multi_property_indexed`	10000	1.848%	1.157%	2.534%

Improvements (faster)

Group	Bench	Param	Change	CI Lower	CI Upper
sample_entity	`sample_entity_single_property_unindexed`	100000	-4.178%	-4.948%	-3.437%
examples	`example-basic-infection`		-3.980%	-4.684%	-3.267%
sample_entity	`sample_entity_whole_population`	100000	-3.251%	-4.641%	-1.974%
sample_entity	`sample_entity_multi_property_indexed`	1000	-3.132%	-4.223%	-2.203%
sample_entity	`sample_entity_multi_property_indexed`	100000	-1.727%	-2.245%	-1.188%
counts	`multi_property_unindexed_entities`		-1.555%	-2.055%	-1.041%

Unchanged / inconclusive (CI crosses 0%)

Group	Bench	Param	Change	CI Lower	CI Upper
large_dataset	`bench_filter_unindexed_entity`		4.632%	-0.131%	9.804%
sample_entity	`sample_entity_single_property_indexed`	100000	1.380%	0.862%	1.937%
indexing	`with_query_results_indexed_multi-property_entities`		-1.309%	-2.353%	-0.489%
sample_entity	`sample_entity_whole_population`	1000	1.308%	0.609%	1.982%
sample_entity	`sample_entity_single_property_indexed`	1000	-1.211%	-1.919%	-0.491%
large_dataset	`bench_query_population_derived_property_entities`		1.116%	0.592%	1.598%
large_dataset	`bench_filter_indexed_entity`		-0.754%	-12.197%	11.476%
large_dataset	`bench_query_population_indexed_property_entities`		0.752%	0.182%	1.332%
sample_entity	`sample_entity_whole_population`	10000	0.742%	0.065%	1.456%
indexing	`with_query_results_single_indexed_property_entities`		-0.576%	-0.985%	-0.209%
indexing	`query_people_count_indexed_multi-property_entities`		-0.537%	-1.023%	-0.037%
sample_entity	`sample_entity_single_property_indexed`	10000	-0.530%	-1.206%	0.234%
large_dataset	`bench_match_entity`		0.480%	-0.054%	0.983%
sampling	`sampling_single_l_reservoir_entities`		0.473%	0.169%	0.877%
algorithm_benches	`algorithm_sampling_single_rand_reservoir`		-0.434%	-1.117%	0.248%
counts	`index_after_adding_entities`		0.430%	0.289%	0.592%
indexing	`query_people_count_single_indexed_property_entities`		0.401%	0.211%	0.597%
indexing	`query_people_count_multiple_individually_indexed_properties_enti`		-0.397%	-0.475%	-0.323%
large_dataset	`bench_query_population_property_entities`		-0.301%	-0.806%	0.062%
large_dataset	`bench_query_population_multi_unindexed_entities`		0.300%	0.066%	0.585%
algorithm_benches	`algorithm_sampling_single_l_reservoir`		-0.284%	-0.904%	0.284%
counts	`reindex_after_adding_more_entities`		-0.273%	-0.535%	-0.028%
sampling	`sampling_multiple_known_length_entities`		-0.270%	-0.855%	0.345%
large_dataset	`bench_query_population_multi_indexed_entities`		-0.226%	-0.649%	0.073%
counts	`single_property_unindexed_entities`		-0.207%	-0.640%	0.090%
examples	`example-births-deaths`		0.164%	0.005%	0.341%
counts	`single_property_indexed_entities`		-0.159%	-0.774%	0.351%
counts	`multi_property_indexed_entities`		0.146%	-0.313%	0.670%
indexing	`query_people_single_indexed_property_entities`		-0.143%	-0.216%	-0.066%
sampling	`sampling_multiple_unindexed_entities`		-0.103%	-0.177%	-0.029%
sampling	`sampling_single_unindexed_entities`		-0.099%	-0.185%	-0.011%
algorithm_benches	`algorithm_sampling_single_known_length`		0.014%	-0.256%	0.377%

github-actions · 2026-02-23T21:41:11Z

Benchmark Results

Hyperfine

Command	Mean [ms]	Min [ms]	Max [ms]	Relative
`large_sir::baseline`	2.9 ± 0.0	2.8	3.0	1.00
`large_sir::entities`	12.1 ± 0.2	11.8	12.8	4.17 ± 0.10

Criterion

Regressions (slower)

Group	Bench	Param	Change	CI Lower	CI Upper
sample_entity	`sample_entity_single_property_unindexed`	10000	19.343%	18.806%	19.771%
sample_entity	`sample_entity_single_property_indexed`	10000	15.797%	15.243%	16.288%
sample_entity	`sample_entity_single_property_indexed`	100000	13.726%	13.029%	14.342%
sample_entity	`sample_entity_single_property_indexed`	1000	12.949%	12.579%	13.345%
indexing	`query_people_indexed_multi-property_entities`		11.853%	11.467%	12.306%
counts	`multi_property_unindexed_entities`		7.441%	5.158%	9.805%
sample_entity	`sample_entity_multi_property_indexed`	1000	6.548%	5.702%	7.325%
sample_entity	`sample_entity_multi_property_indexed`	10000	5.914%	5.228%	6.531%
sample_entity	`sample_entity_multi_property_indexed`	100000	5.485%	4.915%	6.018%
counts	`reindex_after_adding_more_entities`		2.269%	2.139%	2.395%
indexing	`query_people_multiple_individually_indexed_properties_entities`		1.631%	1.336%	1.914%
counts	`index_after_adding_entities`		1.242%	1.065%	1.393%

Improvements (faster)

Group	Bench	Param	Change	CI Lower	CI Upper
indexing	`query_people_single_indexed_property_entities`		-19.050%	-19.120%	-18.989%
counts	`single_property_unindexed_entities`		-7.260%	-9.258%	-4.981%
large_dataset	`bench_query_population_multi_indexed_entities`		-6.802%	-7.196%	-6.515%
algorithm_benches	`algorithm_sampling_multiple_l_reservoir`		-6.351%	-6.690%	-6.075%
sample_entity	`sample_entity_single_property_unindexed`	100000	-3.625%	-4.128%	-2.966%
algorithm_benches	`algorithm_sampling_single_l_reservoir`		-3.389%	-4.138%	-2.850%
sample_entity	`sample_entity_whole_population`	100000	-3.153%	-4.969%	-1.614%
sampling	`sampling_multiple_l_reservoir_entities`		-2.230%	-2.372%	-2.064%
examples	`example-births-deaths`		-1.796%	-2.256%	-1.282%

Unchanged / inconclusive (CI crosses 0%)

Group	Bench	Param	Change	CI Lower	CI Upper
sampling	`sampling_multiple_known_length_entities`		-1.442%	-2.241%	-0.729%
sample_entity	`sample_entity_whole_population`	10000	1.383%	0.748%	2.130%
indexing	`with_query_results_single_indexed_property_entities`		-1.205%	-2.126%	-0.627%
large_dataset	`bench_query_population_multi_unindexed_entities`		-0.990%	-1.435%	-0.641%
sample_entity	`sample_entity_single_property_unindexed`	1000	-0.894%	-1.447%	-0.451%
indexing	`with_query_results_indexed_multi-property_entities`		-0.837%	-2.325%	0.213%
algorithm_benches	`algorithm_sampling_multiple_known_length`		-0.792%	-0.995%	-0.604%
examples	`example-basic-infection`		-0.759%	-1.132%	-0.399%
indexing	`with_query_results_multiple_individually_indexed_properties_enti`		-0.752%	-0.932%	-0.595%
counts	`single_property_indexed_entities`		0.686%	0.335%	0.947%
large_dataset	`bench_filter_indexed_entity`		-0.493%	-12.529%	11.938%
counts	`multi_property_indexed_entities`		-0.467%	-0.819%	-0.046%
large_dataset	`bench_query_population_indexed_property_entities`		0.403%	-0.056%	0.743%
indexing	`query_people_count_indexed_multi-property_entities`		0.333%	0.029%	0.871%
algorithm_benches	`algorithm_sampling_single_known_length`		0.306%	0.127%	0.536%
sampling	`sampling_single_l_reservoir_entities`		0.297%	0.204%	0.389%
large_dataset	`bench_filter_unindexed_entity`		0.267%	-4.526%	5.277%
large_dataset	`bench_query_population_property_entities`		-0.184%	-0.434%	0.088%
indexing	`query_people_count_single_indexed_property_entities`		0.171%	-0.171%	0.683%
large_dataset	`bench_query_population_derived_property_entities`		-0.166%	-0.742%	0.382%
algorithm_benches	`algorithm_sampling_single_rand_reservoir`		-0.166%	-0.430%	0.066%
sample_entity	`sample_entity_whole_population`	1000	0.158%	-0.264%	0.681%
sampling	`sampling_single_known_length_entities`		0.074%	-0.331%	0.393%
sampling	`sampling_single_unindexed_entities`		-0.059%	-0.130%	0.015%
sampling	`sampling_multiple_unindexed_entities`		0.046%	-0.052%	0.181%
indexing	`query_people_count_multiple_individually_indexed_properties_enti`		-0.042%	-0.117%	0.029%
large_dataset	`bench_match_entity`		-0.031%	-0.407%	0.282%

github-actions · 2026-02-23T21:46:28Z

Benchmark Results

Hyperfine

Command	Mean [ms]	Min [ms]	Max [ms]	Relative
`large_sir::baseline`	3.0 ± 0.1	2.9	3.2	1.00
`large_sir::entities`	13.2 ± 0.3	12.8	14.6	4.47 ± 0.15

Criterion

Regressions (slower)

Group	Bench	Param	Change	CI Lower	CI Upper
sample_entity	`sample_entity_single_property_unindexed`	10000	18.771%	17.928%	19.661%
large_dataset	`bench_query_population_multi_unindexed_entities`		7.860%	5.905%	9.926%
sample_entity	`sample_entity_single_property_unindexed`	1000	6.133%	3.686%	8.518%
counts	`multi_property_unindexed_entities`		6.103%	4.482%	7.882%
counts	`multi_property_indexed_entities`		4.720%	3.896%	5.618%
indexing	`query_people_multiple_individually_indexed_properties_entities`		2.625%	2.118%	3.112%
sample_entity	`sample_entity_single_property_indexed`	10000	1.960%	1.237%	2.683%
counts	`single_property_indexed_entities`		1.870%	1.560%	2.188%
counts	`reindex_after_adding_more_entities`		1.510%	1.049%	1.976%

Improvements (faster)

Group	Bench	Change	CI Lower	CI Upper
indexing	`query_people_indexed_multi-property_entities`	-7.595%	-8.435%	-6.757%
sampling	`sampling_multiple_l_reservoir_entities`	-6.371%	-6.631%	-6.106%
algorithm_benches	`algorithm_sampling_multiple_known_length`	-4.724%	-6.097%	-3.588%
indexing	`with_query_results_multiple_individually_indexed_properties_enti`	-4.404%	-4.884%	-3.978%
algorithm_benches	`algorithm_sampling_multiple_l_reservoir`	-1.484%	-1.732%	-1.194%

Unchanged / inconclusive (CI crosses 0%)

Group	Bench	Param	Change	CI Lower	CI Upper
sample_entity	`sample_entity_whole_population`	100000	-1.542%	-2.465%	-0.702%
indexing	`with_query_results_indexed_multi-property_entities`		-1.360%	-2.366%	-0.476%
sample_entity	`sample_entity_whole_population`	10000	1.176%	0.481%	1.900%
indexing	`query_people_count_indexed_multi-property_entities`		-1.139%	-1.698%	-0.613%
counts	`single_property_unindexed_entities`		0.958%	-0.013%	2.073%
sample_entity	`sample_entity_single_property_unindexed`	100000	-0.944%	-1.541%	-0.343%
indexing	`query_people_count_multiple_individually_indexed_properties_enti`		-0.936%	-1.193%	-0.718%
algorithm_benches	`algorithm_sampling_single_known_length`		-0.792%	-1.186%	-0.365%
sample_entity	`sample_entity_single_property_indexed`	1000	-0.774%	-1.494%	-0.033%
sample_entity	`sample_entity_multi_property_indexed`	100000	0.714%	0.133%	1.337%
large_dataset	`bench_query_population_derived_property_entities`		0.674%	0.089%	1.268%
sampling	`sampling_single_known_length_entities`		-0.633%	-1.060%	-0.208%
indexing	`with_query_results_single_indexed_property_entities`		0.553%	0.209%	0.920%
indexing	`query_people_single_indexed_property_entities`		0.491%	0.118%	0.817%
sampling	`sampling_multiple_known_length_entities`		-0.477%	-1.364%	0.248%
algorithm_benches	`algorithm_sampling_single_rand_reservoir`		-0.401%	-0.764%	-0.047%
sampling	`sampling_single_l_reservoir_entities`		-0.326%	-0.892%	0.349%
sample_entity	`sample_entity_single_property_indexed`	100000	0.299%	-0.426%	0.990%
algorithm_benches	`algorithm_sampling_single_l_reservoir`		-0.296%	-0.674%	0.120%
sample_entity	`sample_entity_whole_population`	1000	-0.246%	-0.945%	0.578%
large_dataset	`bench_query_population_multi_indexed_entities`		0.232%	-0.202%	0.589%
indexing	`query_people_count_single_indexed_property_entities`		-0.220%	-0.666%	0.113%
examples	`example-basic-infection`		-0.184%	-0.752%	0.369%
sample_entity	`sample_entity_multi_property_indexed`	1000	-0.166%	-1.001%	0.611%
large_dataset	`bench_query_population_indexed_property_entities`		0.142%	-0.350%	0.486%
large_dataset	`bench_match_entity`		-0.124%	-0.342%	0.078%
large_dataset	`bench_query_population_property_entities`		-0.095%	-0.501%	0.477%
sample_entity	`sample_entity_multi_property_indexed`	10000	-0.076%	-1.567%	1.097%
examples	`example-births-deaths`		0.070%	-0.396%	0.600%
sampling	`sampling_multiple_unindexed_entities`		0.054%	-0.074%	0.148%
large_dataset	`bench_filter_unindexed_entity`		0.034%	-4.504%	4.966%
counts	`index_after_adding_entities`		0.032%	-0.654%	0.902%
sampling	`sampling_single_unindexed_entities`		0.023%	-0.128%	0.174%
large_dataset	`bench_filter_indexed_entity`		-0.010%	-11.507%	13.114%

github-actions · 2026-02-24T00:16:02Z

Benchmark Results

Hyperfine

Command	Mean [ms]	Min [ms]	Max [ms]	Relative
`large_sir::baseline`	2.9 ± 0.0	2.8	3.0	1.00
`large_sir::entities`	11.9 ± 0.2	11.7	13.2	4.14 ± 0.11

Criterion

Regressions (slower)

Group	Bench	Change	CI Lower	CI Upper
sampling	`sampling_multiple_l_reservoir_entities`	3.415%	3.114%	3.667%
sampling	`sampling_multiple_unindexed_entities`	2.488%	2.080%	2.931%
counts	`multi_property_unindexed_entities`	1.391%	1.000%	1.868%

Improvements (faster)

Group	Bench	Param	Change	CI Lower	CI Upper
sample_entity	`sample_entity_single_property_unindexed`	1000	-8.943%	-10.129%	-7.713%
large_dataset	`bench_filter_unindexed_entity`		-7.416%	-11.612%	-2.813%
algorithm_benches	`algorithm_sampling_multiple_l_reservoir`		-6.693%	-7.008%	-6.277%
sample_entity	`sample_entity_whole_population`	100000	-3.370%	-3.848%	-2.928%
indexing	`with_query_results_multiple_individually_indexed_properties_enti`		-2.473%	-2.840%	-2.095%
algorithm_benches	`algorithm_sampling_single_l_reservoir`		-1.752%	-1.922%	-1.466%

Unchanged / inconclusive (CI crosses 0%)

Group	Bench	Param	Change	CI Lower	CI Upper
large_dataset	`bench_filter_indexed_entity`		-10.405%	-21.316%	1.195%
sample_entity	`sample_entity_multi_property_indexed`	100000	1.830%	0.754%	3.178%
sample_entity	`sample_entity_multi_property_indexed`	1000	1.408%	0.687%	2.300%
sample_entity	`sample_entity_single_property_indexed`	1000	1.222%	-0.196%	3.155%
sample_entity	`sample_entity_single_property_unindexed`	10000	1.146%	-5.026%	8.705%
indexing	`query_people_multiple_individually_indexed_properties_entities`		1.108%	0.927%	1.257%
counts	`reindex_after_adding_more_entities`		1.035%	0.823%	1.216%
large_dataset	`bench_query_population_indexed_property_entities`		-0.861%	-1.084%	-0.625%
counts	`multi_property_indexed_entities`		0.666%	0.065%	1.213%
large_dataset	`bench_query_population_multi_unindexed_entities`		-0.652%	-2.544%	1.350%
sample_entity	`sample_entity_whole_population`	10000	-0.614%	-0.959%	-0.329%
large_dataset	`bench_query_population_property_entities`		0.593%	-0.237%	1.552%
examples	`example-basic-infection`		-0.584%	-0.924%	-0.306%
large_dataset	`bench_query_population_multi_indexed_entities`		-0.547%	-0.731%	-0.363%
indexing	`with_query_results_single_indexed_property_entities`		-0.459%	-0.723%	-0.233%
sampling	`sampling_single_l_reservoir_entities`		0.449%	0.238%	0.647%
indexing	`query_people_count_indexed_multi-property_entities`		-0.403%	-1.039%	0.290%
indexing	`query_people_count_multiple_individually_indexed_properties_enti`		0.385%	0.181%	0.526%
sample_entity	`sample_entity_single_property_unindexed`	100000	-0.375%	-0.683%	-0.102%
sample_entity	`sample_entity_whole_population`	1000	0.374%	-0.435%	1.711%
sample_entity	`sample_entity_single_property_indexed`	100000	0.353%	-0.147%	0.809%
sampling	`sampling_multiple_known_length_entities`		0.342%	-0.320%	1.001%
counts	`single_property_indexed_entities`		-0.262%	-0.642%	0.035%
algorithm_benches	`algorithm_sampling_multiple_known_length`		0.255%	0.019%	0.515%
indexing	`with_query_results_indexed_multi-property_entities`		0.225%	-0.501%	0.781%
sampling	`sampling_single_known_length_entities`		-0.198%	-0.521%	0.130%
indexing	`query_people_indexed_multi-property_entities`		-0.194%	-0.783%	0.286%
counts	`index_after_adding_entities`		0.178%	-0.068%	0.412%
examples	`example-births-deaths`		0.168%	-0.059%	0.442%
algorithm_benches	`algorithm_sampling_single_rand_reservoir`		-0.163%	-0.551%	0.124%
algorithm_benches	`algorithm_sampling_single_known_length`		-0.154%	-0.404%	0.082%
indexing	`query_people_single_indexed_property_entities`		0.146%	-0.004%	0.265%
counts	`single_property_unindexed_entities`		0.109%	-0.261%	0.627%
indexing	`query_people_count_single_indexed_property_entities`		-0.108%	-0.264%	0.056%
large_dataset	`bench_match_entity`		-0.068%	-0.568%	0.383%
sample_entity	`sample_entity_multi_property_indexed`	10000	0.043%	-0.397%	0.535%
sample_entity	`sample_entity_single_property_indexed`	10000	-0.042%	-0.297%	0.285%
large_dataset	`bench_query_population_derived_property_entities`		-0.029%	-0.561%	0.410%
sampling	`sampling_single_unindexed_entities`		-0.011%	-0.121%	0.085%

cdc-as81 added 3 commits February 23, 2026 16:05

chore: fix ixa setup script

51d99b4

fix: broken workflow

1a7f638

chore: change location of the workflow

ff657ee

github-actions bot added a commit that referenced this pull request Feb 23, 2026

Update bench-history.json (PR #796 @ 51d99b4)

715ae45

github-actions bot added a commit that referenced this pull request Feb 23, 2026

Update bench-history.json (PR #796 @ 1a7f638)

7236267

github-actions bot added a commit that referenced this pull request Feb 23, 2026

Update bench-history.json (PR #796 @ ff657ee)

85a24f8

fix: workflow

d4fb652

github-actions bot added a commit that referenced this pull request Feb 24, 2026

Update bench-history.json (PR #796 @ d4fb652)

80be1fc

cdc-as81 requested review from RobertJacobsonCDC February 24, 2026 00:28

cdc-as81 linked an issue Feb 24, 2026 that may be closed by this pull request

setup_new_ixa_project.sh fails to download .pre-commit-config.yaml #773

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chore: fix ixa setup script#796

chore: fix ixa setup script#796
cdc-as81 wants to merge 4 commits intomainfrom
cdc-as81-fix-ixa-setup-script

cdc-as81 commented Feb 23, 2026

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cdc-as81 commented Feb 23, 2026

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github-actions bot commented Feb 24, 2026

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